View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10210_low_10 (Length: 241)
Name: NF10210_low_10
Description: NF10210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10210_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 24 - 237
Target Start/End: Original strand, 3071421 - 3071642
Alignment:
| Q |
24 |
gagctttaacacacacaaaaagagctttaaaaggtgccaagagacactcattagcatttatttctctttctacctttttaattgattgtgactaaatcat |
123 |
Q |
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| T |
3071421 |
gagctttaacacacacaaaaagagctttaaaaggtgccaagagacactcattaccatttatttctctttctacctttttaattgattgtaactaaatcat |
3071520 |
T |
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| Q |
124 |
aaaaattaacaacatataaatgagatgaacatttgtttc--------nnnnnnnntgagatgaacatatacatgatccaacatttgagtgaagacttgat |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3071521 |
aaaaattaacaacatataaatgagatgaacatttgtttcaaaaaaaaaaaaaaaatgagatgaacatatacatgatccaacatttgagtgaagacttgat |
3071620 |
T |
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| Q |
216 |
gtgaagttctctcttatgtgga |
237 |
Q |
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|||||||||||||||||||||| |
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| T |
3071621 |
gtgaagttctctcttatgtgga |
3071642 |
T |
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