View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10211_high_20 (Length: 316)

Name: NF10211_high_20
Description: NF10211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10211_high_20
NF10211_high_20
[»] chr8 (40 HSPs)
chr8 (165-312)||(43275527-43275674)
chr8 (164-312)||(40918859-40919007)
chr8 (165-312)||(7146913-7147062)
chr8 (164-312)||(40058431-40058581)
chr8 (165-312)||(11174351-11174500)
chr8 (165-312)||(37345571-37345720)
chr8 (163-312)||(11646453-11646604)
chr8 (172-312)||(30999652-30999791)
chr8 (165-312)||(3585451-3585600)
chr8 (164-302)||(2540069-2540209)
chr8 (165-312)||(27034997-27035144)
chr8 (165-309)||(20546420-20546564)
chr8 (165-312)||(36068080-36068229)
chr8 (163-295)||(28562419-28562554)
chr8 (213-300)||(28326797-28326883)
chr8 (165-218)||(40486453-40486506)
chr8 (164-218)||(8697898-8697952)
chr8 (164-218)||(41307961-41308015)
chr8 (165-218)||(45278701-45278754)
chr8 (163-218)||(10646590-10646645)
chr8 (219-300)||(13881094-13881178)
chr8 (167-300)||(35866616-35866751)
chr8 (163-295)||(28567917-28568051)
chr8 (163-295)||(28575510-28575644)
chr8 (219-269)||(26629182-26629232)
chr8 (224-295)||(10181002-10181074)
chr8 (215-300)||(30906828-30906917)
chr8 (260-302)||(37510363-37510405)
chr8 (164-206)||(41305761-41305803)
chr8 (164-193)||(616782-616811)
chr8 (164-193)||(617017-617046)
chr8 (164-193)||(623175-623204)
chr8 (164-193)||(623410-623439)
chr8 (161-190)||(18044663-18044692)
chr8 (216-292)||(27563999-27564075)
chr8 (164-193)||(40494618-40494647)
chr8 (164-193)||(42587482-42587511)
chr8 (165-193)||(132017-132045)
chr8 (165-197)||(5878317-5878349)
chr8 (165-193)||(14237514-14237542)
[»] chr2 (27 HSPs)
chr2 (165-311)||(1102503-1102651)
chr2 (165-312)||(39938170-39938319)
chr2 (166-312)||(23366790-23366938)
chr2 (164-312)||(3518907-3519056)
chr2 (162-312)||(12969868-12970019)
chr2 (165-290)||(37673887-37674014)
chr2 (193-312)||(1646317-1646436)
chr2 (165-218)||(34224378-34224431)
chr2 (242-311)||(22388265-22388335)
chr2 (165-290)||(39562037-39562162)
chr2 (213-300)||(19976380-19976468)
chr2 (175-250)||(1002922-1002997)
chr2 (213-285)||(35179090-35179164)
chr2 (213-300)||(18078104-18078193)
chr2 (216-300)||(32840312-32840401)
chr2 (228-295)||(34242040-34242107)
chr2 (218-300)||(14779832-14779914)
chr2 (163-193)||(39358144-39358174)
chr2 (164-193)||(2183191-2183220)
chr2 (164-193)||(5405230-5405259)
chr2 (164-193)||(7608283-7608312)
chr2 (164-193)||(19141065-19141094)
chr2 (164-193)||(19141300-19141329)
chr2 (240-300)||(4917839-4917899)
chr2 (165-193)||(8042256-8042284)
chr2 (165-193)||(11841593-11841621)
chr2 (165-193)||(44365391-44365419)
[»] chr4 (42 HSPs)
chr4 (164-312)||(21661663-21661813)
chr4 (164-311)||(40122614-40122763)
chr4 (164-312)||(21670427-21670577)
chr4 (157-312)||(25704643-25704800)
chr4 (164-312)||(24706375-24706525)
chr4 (161-312)||(14261040-14261193)
chr4 (164-312)||(44568836-44568986)
chr4 (162-312)||(12071558-12071709)
chr4 (164-302)||(21310424-21310564)
chr4 (163-312)||(22321396-22321546)
chr4 (165-312)||(34324711-34324860)
chr4 (167-302)||(31892240-31892373)
chr4 (165-312)||(20249142-20249289)
chr4 (172-311)||(50767871-50768012)
chr4 (164-279)||(1988035-1988151)
chr4 (213-300)||(20714488-20714577)
chr4 (165-292)||(26676714-26676843)
chr4 (237-302)||(21064834-21064899)
chr4 (164-295)||(6129093-6129226)
chr4 (216-300)||(32543532-32543617)
chr4 (164-300)||(19692722-19692860)
chr4 (164-300)||(19703307-19703445)
chr4 (180-218)||(19361662-19361700)
chr4 (132-166)||(25273305-25273339)
chr4 (213-250)||(48652268-48652305)
chr4 (231-300)||(51777687-51777755)
chr4 (164-193)||(26170221-26170250)
chr4 (164-193)||(35381128-35381157)
chr4 (164-193)||(38416884-38416913)
chr4 (164-193)||(47386520-47386549)
chr4 (165-193)||(2760730-2760758)
chr4 (165-193)||(2760961-2760989)
chr4 (165-193)||(4467520-4467548)
chr4 (165-193)||(19433358-19433386)
chr4 (165-193)||(26169986-26170014)
chr4 (165-193)||(29830343-29830371)
chr4 (163-191)||(29830579-29830607)
chr4 (165-193)||(38416650-38416678)
chr4 (165-193)||(44232077-44232105)
chr4 (165-193)||(45292066-45292094)
chr4 (165-193)||(55209574-55209602)
chr4 (165-193)||(55209808-55209836)
[»] chr3 (42 HSPs)
chr3 (165-312)||(36881282-36881429)
chr3 (164-312)||(3383075-3383225)
chr3 (164-312)||(13364842-13364992)
chr3 (162-302)||(29375135-29375277)
chr3 (165-312)||(198855-199004)
chr3 (158-312)||(19241796-19241952)
chr3 (165-312)||(23088059-23088208)
chr3 (165-312)||(46694238-46694387)
chr3 (164-312)||(43750136-43750285)
chr3 (163-260)||(32835138-32835235)
chr3 (163-284)||(13702767-13702890)
chr3 (165-243)||(27707363-27707441)
chr3 (215-291)||(44522491-44522567)
chr3 (164-267)||(37293436-37293539)
chr3 (164-218)||(12094581-12094635)
chr3 (216-295)||(37780988-37781069)
chr3 (164-218)||(44277455-44277509)
chr3 (165-218)||(19911509-19911562)
chr3 (256-309)||(27707119-27707172)
chr3 (165-218)||(38805245-38805298)
chr3 (164-236)||(48963155-48963225)
chr3 (216-291)||(1455297-1455374)
chr3 (217-300)||(19897067-19897152)
chr3 (213-312)||(26105079-26105180)
chr3 (172-300)||(53559750-53559880)
chr3 (164-206)||(19912174-19912216)
chr3 (164-206)||(38806341-38806383)
chr3 (182-250)||(48820444-48820512)
chr3 (162-193)||(42490430-42490461)
chr3 (165-203)||(18355868-18355906)
chr3 (254-300)||(24064315-24064361)
chr3 (165-206)||(12095423-12095464)
chr3 (164-193)||(27010473-27010502)
chr3 (164-193)||(27010708-27010737)
chr3 (165-206)||(44276775-44276816)
chr3 (174-218)||(4226716-4226759)
chr3 (165-193)||(6910568-6910596)
chr3 (165-193)||(13499569-13499597)
chr3 (165-193)||(19823900-19823928)
chr3 (165-193)||(20765430-20765458)
chr3 (165-193)||(42761483-42761511)
chr3 (165-193)||(42761717-42761745)
[»] chr6 (33 HSPs)
chr6 (165-312)||(8626482-8626631)
chr6 (164-312)||(29260191-29260341)
chr6 (164-302)||(7761300-7761438)
chr6 (164-312)||(1605578-1605727)
chr6 (172-312)||(30734611-30734753)
chr6 (162-312)||(13757205-13757356)
chr6 (171-279)||(30734771-30734879)
chr6 (164-312)||(15064823-15064972)
chr6 (164-311)||(17942442-17942593)
chr6 (180-311)||(31559865-31559998)
chr6 (165-312)||(4129435-4129576)
chr6 (165-302)||(8235624-8235763)
chr6 (162-300)||(14286986-14287125)
chr6 (164-218)||(19996715-19996769)
chr6 (215-300)||(26860819-26860902)
chr6 (216-300)||(21277574-21277659)
chr6 (216-295)||(11370630-11370711)
chr6 (220-276)||(33845449-33845505)
chr6 (213-293)||(3798151-3798233)
chr6 (164-206)||(19996321-19996363)
chr6 (164-250)||(1814594-1814680)
chr6 (164-193)||(4147930-4147959)
chr6 (164-193)||(18668687-18668716)
chr6 (164-193)||(18668922-18668951)
chr6 (164-193)||(19087957-19087986)
chr6 (164-193)||(19088192-19088221)
chr6 (164-193)||(20437016-20437045)
chr6 (164-193)||(24623940-24623969)
chr6 (164-193)||(32414913-32414942)
chr6 (164-193)||(32420754-32420783)
chr6 (164-193)||(32671815-32671844)
chr6 (165-193)||(22055006-22055034)
chr6 (165-193)||(25476042-25476070)
[»] chr1 (49 HSPs)
chr1 (161-312)||(40783785-40783938)
chr1 (165-312)||(47037980-47038127)
chr1 (165-312)||(23045407-23045556)
chr1 (165-312)||(284333-284482)
chr1 (165-302)||(24772043-24772182)
chr1 (165-312)||(321626-321775)
chr1 (166-302)||(27211102-27211240)
chr1 (172-302)||(46771644-46771776)
chr1 (164-302)||(23526239-23526379)
chr1 (180-311)||(52037252-52037382)
chr1 (185-302)||(33082765-33082884)
chr1 (172-311)||(1749314-1749455)
chr1 (216-291)||(1837978-1838053)
chr1 (213-300)||(52478016-52478103)
chr1 (164-218)||(3943059-3943113)
chr1 (164-218)||(9588669-9588723)
chr1 (165-218)||(13984991-13985044)
chr1 (165-218)||(41959078-41959131)
chr1 (213-300)||(31003926-31004012)
chr1 (165-292)||(40261419-40261549)
chr1 (165-300)||(51064893-51065033)
chr1 (224-304)||(7765072-7765154)
chr1 (213-300)||(34458863-34458950)
chr1 (213-285)||(3657125-3657199)
chr1 (164-206)||(44227847-44227889)
chr1 (164-218)||(44228228-44228282)
chr1 (173-218)||(1168369-1168414)
chr1 (219-300)||(18396749-18396832)
chr1 (164-292)||(25929113-25929241)
chr1 (225-288)||(40562733-40562797)
chr1 (215-300)||(27143151-27143239)
chr1 (164-206)||(41959809-41959851)
chr1 (165-206)||(3943763-3943804)
chr1 (236-300)||(24876636-24876699)
chr1 (179-231)||(40564241-40564293)
chr1 (163-206)||(9589631-9589674)
chr1 (164-203)||(23526478-23526517)
chr1 (162-193)||(30701715-30701746)
chr1 (236-300)||(31061594-31061659)
chr1 (163-197)||(10845479-10845513)
chr1 (164-193)||(6402644-6402673)
chr1 (164-193)||(11641066-11641095)
chr1 (164-193)||(36399332-36399361)
chr1 (164-193)||(36757485-36757514)
chr1 (255-300)||(37926900-37926945)
chr1 (164-193)||(40771771-40771800)
chr1 (164-193)||(40772006-40772035)
chr1 (165-193)||(16120674-16120702)
chr1 (165-193)||(52024260-52024288)
[»] chr7 (33 HSPs)
chr7 (167-312)||(36453252-36453399)
chr7 (164-312)||(27813810-27813960)
chr7 (164-312)||(10981507-10981657)
chr7 (165-312)||(40348960-40349109)
chr7 (165-312)||(25614481-25614628)
chr7 (165-302)||(47110451-47110588)
chr7 (219-292)||(16360438-16360511)
chr7 (215-300)||(16662146-16662231)
chr7 (215-300)||(17636506-17636591)
chr7 (213-295)||(3091565-3091649)
chr7 (164-218)||(25060133-25060187)
chr7 (188-300)||(37983179-37983289)
chr7 (213-295)||(7743542-7743625)
chr7 (164-218)||(2911548-2911602)
chr7 (225-302)||(27942177-27942256)
chr7 (213-311)||(3498884-3498983)
chr7 (164-206)||(2910858-2910900)
chr7 (162-193)||(38852081-38852112)
chr7 (171-249)||(8379948-8380026)
chr7 (163-193)||(41897986-41898016)
chr7 (164-193)||(16778504-16778533)
chr7 (164-193)||(25566547-25566576)
chr7 (164-193)||(28061514-28061543)
chr7 (164-193)||(28061749-28061778)
chr7 (164-193)||(41898222-41898251)
chr7 (164-193)||(47156261-47156290)
chr7 (165-193)||(20885103-20885131)
chr7 (165-193)||(36623308-36623336)
chr7 (165-193)||(36623542-36623570)
chr7 (165-193)||(42877386-42877414)
chr7 (165-193)||(46103370-46103398)
chr7 (165-193)||(46103597-46103625)
chr7 (165-193)||(47156027-47156055)
[»] chr5 (26 HSPs)
chr5 (165-302)||(25773649-25773788)
chr5 (165-312)||(12806981-12807130)
chr5 (165-312)||(30720620-30720769)
chr5 (165-312)||(40886738-40886887)
chr5 (164-312)||(10285185-10285335)
chr5 (165-312)||(36561227-36561376)
chr5 (164-302)||(37900762-37900902)
chr5 (176-302)||(7277560-7277688)
chr5 (162-311)||(16983255-16983407)
chr5 (203-312)||(25683357-25683467)
chr5 (168-300)||(734478-734611)
chr5 (164-288)||(23098386-23098504)
chr5 (164-300)||(39070882-39071020)
chr5 (165-214)||(15305216-15305265)
chr5 (216-300)||(16054165-16054249)
chr5 (213-300)||(30403101-30403191)
chr5 (164-300)||(11319558-11319696)
chr5 (164-250)||(11796450-11796536)
chr5 (164-206)||(15304821-15304863)
chr5 (216-300)||(1056422-1056507)
chr5 (164-193)||(8086264-8086293)
chr5 (164-193)||(9502626-9502655)
chr5 (165-193)||(978077-978105)
chr5 (165-193)||(978311-978339)
chr5 (165-193)||(14634157-14634185)
chr5 (165-193)||(33387453-33387481)
[»] scaffold1431 (1 HSPs)
scaffold1431 (164-312)||(27-177)
[»] scaffold0054 (1 HSPs)
scaffold0054 (163-302)||(45452-45593)
[»] scaffold1770 (1 HSPs)
scaffold1770 (165-312)||(170-311)
[»] scaffold0062 (1 HSPs)
scaffold0062 (180-311)||(394-525)
[»] scaffold0056 (1 HSPs)
scaffold0056 (215-300)||(70874-70961)
[»] scaffold0257 (2 HSPs)
scaffold0257 (165-218)||(23467-23520)
scaffold0257 (165-206)||(23872-23913)
[»] scaffold0025 (1 HSPs)
scaffold0025 (231-302)||(65301-65375)
[»] scaffold0076 (1 HSPs)
scaffold0076 (261-295)||(15465-15499)
[»] scaffold0022 (1 HSPs)
scaffold0022 (165-193)||(100647-100675)


Alignment Details
Target: chr8 (Bit Score: 124; Significance: 9e-64; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 165 - 312
Target Start/End: Complemental strand, 43275674 - 43275527
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttc 264  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  43275674 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgttttc 43275575  T
Q  265 tataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  43275574 tataatacccttaatcatttattatttcattttatttttttctctctc 43275527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 164 - 312
Target Start/End: Complemental strand, 40919007 - 40918859
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgtttt 263  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||| ||||||| |||||||||||    
T  40919007 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttttatgaaaacatgtgtgtttt 40918908  T
Q  264 ctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  40918907 ctataatacccttaatcatttattatttcattttatttttttctctctc 40918859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 7146913 - 7147062
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgttt 262  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||  |||||||||    
T  7146913 tactccttccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 7147012  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    | |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  7147013 tttataatacccttaatcatttattatttcattttatttttttctctctc 7147062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 164 - 312
Target Start/End: Complemental strand, 40058581 - 40058431
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgtt 261  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||  |||||    
T  40058581 atactccctccgtttcaaaatacatgtccatttcggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 40058482  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  40058481 ttctataatacccttaatcatttattatttcattttatttttttctctctc 40058431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 165 - 312
Target Start/End: Complemental strand, 11174500 - 11174351
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgttt 262  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||  ||||||    
T  11174500 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 11174401  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  11174400 tctataatacccttaatcatttattatttcattttatttttttctctctc 11174351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 37345571 - 37345720
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgttt 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||| |||||||| |||||||||  |||||||||    
T  37345571 tactccctccgtttcaaaatacatgtccattttgaagaaattgcaccaaccaagaaaccaaataaattttgttatttttaatgaaaatatgtgtgtgttt 37345670  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  37345671 tctataatacccttaatcatttattatttcattttatttttttctctctc 37345720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 163 - 312
Target Start/End: Complemental strand, 11646604 - 11646453
Alignment:
Q  163 gatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgt 260  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||  ||||||||||    
T  11646604 gatactcccttcgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgt 11646505  T
Q  261 tttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  11646504 tttctataatacccttaatcatttattatttcattttacttttttctctctc 11646453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 172 - 312
Target Start/End: Complemental strand, 30999791 - 30999652
Alignment:
Q  172 tccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataata 271  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30999791 tccgtttcaaaatacatgtcaattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgttttctataata 30999692  T
Q  272 cccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  30999691 cccttaatcatttattatttcattttatttt-ttctctctc 30999652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 3585451 - 3585600
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgttt 262  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||  ||||||||||||    
T  3585451 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttt 3585550  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||| ||||||||||||||||||| ||| | |||||||    
T  3585551 tctataatacccttaatcatttattatttcattttactttttcctctctc 3585600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 164 - 302
Target Start/End: Complemental strand, 2540209 - 2540069
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgtt 261  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||  |||||    
T  2540209 atacttcctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 2540110  T
Q  262 ttctataatacccttaaccatttattatttcattttatttt 302  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  2540109 ttctataatacccttaatcatttattatttcattttatttt 2540069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 27034997 - 27035144
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgt-ttt 263  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| ||||||||||||||| ||||| ||| |||    
T  27034997 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataattttttttatttttgatgaaattatgtctgtgttt 27035096  T
Q  264 ctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  27035097 ctataatacccttaaccatttattatttcattctatttt-ttctctctc 27035144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 165 - 309
Target Start/End: Complemental strand, 20546564 - 20546420
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttc 264  Q
    |||||||||| |||||||||| |||||||||||||||||||||||  || |||||||| ||||||||||| ||||||||||||||| ||||||||||||     
T  20546564 tactccctccatttcaaaatatatgtccattttgaagaaattgcaacaatcaagaaattaaataaattttgttatttttgatgaaattatgtgtgtttta 20546465  T
Q  265 tataatacccttaaccatttattatttcattttattttcttctct 309  Q
    ||| ||||||||||| ||||||||||||||| |||||| ||||||    
T  20546464 tatgatacccttaacaatttattatttcattatatttttttctct 20546420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 36068080 - 36068229
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgttt 262  Q
    |||||||||||||||||||||||||||||||||| || ||||| | ||||||| ||| |||||||||||| |||||||| ||||||  ||||||||||||    
T  36068080 tactccctccgtttcaaaatacatgtccattttggaggaattgtactaaccaaaaaaccaaataaattttgttatttttaatgaaaatatatgtgtgttt 36068179  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||| |||| |||||||||||||| ||| |||||||||    
T  36068180 tctataatacccttaatcattaattatttcattttacttttttctctctc 36068229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 28562419 - 28562554
Alignment:
Q  163 gatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtg--- 259  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| ||   |||||| |||||||||||| || | ||||||||||||| | | ||||       
T  28562419 gatacttcctccgtttcaaaatacttgtccattttgaagaaattacacataccaaggaatcaaataaatgttgtcatttttgatgaaattctttgtgttt 28562518  T
Q  260 ttttctataatacccttaaccatttattatttcatt 295  Q
    ||||||||||||||||||  ||||||| ||||||||    
T  28562519 ttttctataatacccttactcatttatgatttcatt 28562554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 28326883 - 28326797
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattatttcattttatt 300  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||| |||||| ||||||||||||||| ||||    
T  28326883 accaagaaatcaaataaattttgttatttttgatgaaattatgtgt-ttttcaataatactcttaactatttattatttcattctatt 28326797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 40486506 - 40486453
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40486506 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 40486453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 8697952 - 8697898
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8697952 atactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 8697898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 41308015 - 41307961
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41308015 atactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 41307961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 45278754 - 45278701
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45278754 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 45278701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 10646590 - 10646645
Alignment:
Q  163 gatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10646590 gatacttcctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 10646645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 13881178 - 13881094
Alignment:
Q  219 aaatcaaataaattttattatttttgatgaaaatatgtgtgtttt---ctataatacccttaaccatttattatttcattttatt 300  Q
    |||||||||||||||| ||||||||||||||| | |||| |||||   ||||||||||||||| |||||||||||||||| ||||    
T  13881178 aaatcaaataaattttgttatttttgatgaaattgtgtgcgtttttttctataatacccttaatcatttattatttcattatatt 13881094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 300
Target Start/End: Original strand, 35866616 - 35866751
Alignment:
Q  167 ctccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgtttt--c 264  Q
    |||| ||||||||| ||||| |||||||||| ||||||||  |   |||||||||| | |||||| || |||||||| |||||| | | ||||||||  |    
T  35866616 ctccttccgtttcacaatacttgtccattttaaagaaattatatataccaagaaattagataaatgttgttatttttcatgaaattctttgtgttttttc 35866715  T
Q  265 tataatacccttaaccatttattatttcattttatt 300  Q
    |||||||||||||| |||||||||||| ||| ||||    
T  35866716 tataatacccttaaacatttattattttattctatt 35866751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 28567917 - 28568051
Alignment:
Q  163 gatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgt-- 260  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| ||   |||||  |||||||||||| || | |||||| |||||| | | |||||      
T  28567917 gatacttcctccgtttcaaaatacttgtccattttgaagaaattacacataccaatgaatcaaataaatgttgtcattttttatgaaattctttgtgtct 28568016  T
Q  261 -tttctataatacccttaaccatttattatttcatt 295  Q
     |||||||||||||||   | |||||||||||||||    
T  28568017 ttttctataataccctgctc-atttattatttcatt 28568051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 28575510 - 28575644
Alignment:
Q  163 gatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgt-- 260  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| ||   |||||  |||||||||||| || | |||||| |||||| | | |||||      
T  28575510 gatacttcctccgtttcaaaatacttgtccattttgaagaaattacacataccaatgaatcaaataaatgttgtcattttttatgaaattctttgtgtct 28575609  T
Q  261 -tttctataatacccttaaccatttattatttcatt 295  Q
     |||||||||||||||   | |||||||||||||||    
T  28575610 ttttctataataccctgctc-atttattatttcatt 28575644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 26629232 - 26629182
Alignment:
Q  219 aaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataa 269  Q
    |||||||||||||||| |||| |||||||||| ||||||| ||||||||||    
T  26629232 aaatcaaataaattttgttatgtttgatgaaattatgtgttttttctataa 26629182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 10181074 - 10181002
Alignment:
Q  224 aaataaattttattatttttgatgaaaatatgtgtgttttct-ataatacccttaaccatttattatttcatt 295  Q
    ||||||||||| |||||||| || ||| || || |||||| | |||||||| |||||||||||||||||||||    
T  10181074 aaataaattttgttattttttataaaattacgtttgtttttttataataccgttaaccatttattatttcatt 10181002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 300
Target Start/End: Complemental strand, 30906917 - 30906828
Alignment:
Q  215 caagaaatcaaataaattttattatttttgatgaaaatatgtg----tgttttctataatacccttaaccatttattatttcattttatt 300  Q
    |||||||||||||||||||| |||||||| |||||| | ||||    | |||||||| | | ||||||||||||||||||| ||| ||||    
T  30906917 caagaaatcaaataaattttgttattttttatgaaattttgtgagttttttttctatgaaaaccttaaccatttattatttaattctatt 30906828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 37510363 - 37510405
Alignment:
Q  260 ttttctataatacccttaaccatttattatttcattttatttt 302  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||    
T  37510363 ttttcaataatacccttaatcatttaatatttcattttatttt 37510405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 41305761 - 41305803
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaatt 206  Q
    |||||| |||||||||||||||||||||||||||  |||||||    
T  41305761 atactctctccgtttcaaaatacatgtccattttagagaaatt 41305803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 616782 - 616811
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  616782 atactccctccgtttcaaaatacatgtcca 616811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 617046 - 617017
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  617046 atactccctccgtttcaaaatacatgtcca 617017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 623175 - 623204
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  623175 atactccctccgtttcaaaatacatgtcca 623204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 623439 - 623410
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  623439 atactccctccgtttcaaaatacatgtcca 623410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 190
Target Start/End: Complemental strand, 18044692 - 18044663
Alignment:
Q  161 ttgatactccctccgtttcaaaatacatgt 190  Q
    ||||||||||||||||||||||||||||||    
T  18044692 ttgatactccctccgtttcaaaatacatgt 18044663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 27564075 - 27563999
Alignment:
Q  216 aagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttct-ataatacccttaaccatttattatttc 292  Q
    |||||||||||||| |||| |||||||| |||| | ||||||| |||| | |||| ||||||||| ||||||||||||    
T  27564075 aagaaatcaaataatttttgttattttt-atgagattatgtgtttttttttataacacccttaacaatttattatttc 27563999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 40494647 - 40494618
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  40494647 atactccctccgtttcaaaatacatgtcca 40494618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 42587511 - 42587482
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  42587511 atactccctccgtttcaaaatacatgtcca 42587482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 132017 - 132045
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  132017 tactccctccgtttcaaaatacatgtcca 132045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 5878317 - 5878349
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccatttt 197  Q
    ||||||||||||||| |||||||||||||||||    
T  5878317 tactccctccgtttccaaatacatgtccatttt 5878349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 14237542 - 14237514
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  14237542 tactccctccgtttcaaaatacatgtcca 14237514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 165 - 311
Target Start/End: Original strand, 1102503 - 1102651
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgttt 262  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||  |||||||||    
T  1102503 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 1102602  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctct 311  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1102603 tctataatacccttaaccatttattatttcattttatttttttctctct 1102651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 39938170 - 39938319
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgttt 262  Q
    ||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||  |||||||||    
T  39938170 tactccctccgtttcaaaatacatgaccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 39938269  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  39938270 tctataatacccttaatcatttattatttcattttatttttttctctctc 39938319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 166 - 312
Target Start/End: Original strand, 23366790 - 23366938
Alignment:
Q  166 actccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgtttt 263  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||| |||||||||  ||||||||||    
T  23366790 actccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttttatgaaaatatgtgtgtgtttt 23366889  T
Q  264 ctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  23366890 ctataatacccttaatcatttattatttcattttatttttttctctctc 23366938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 164 - 312
Target Start/End: Original strand, 3518907 - 3519056
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgtt 261  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||  ||||||||    
T  3518907 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 3519006  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||||||    
T  3519007 ttctataatacccttaataatttattatttcattttatttt-ttctctctc 3519056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 162 - 312
Target Start/End: Complemental strand, 12970019 - 12969868
Alignment:
Q  162 tgatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtg--tg 259  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||| ||||||  |     
T  12970019 tgatactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtata 12969920  T
Q  260 ttttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||||||||||||||||||| ||| |||||| |||||||||    
T  12969919 ttttctataatacccttaaccatttattattttattctatttt-ttctctctc 12969868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 165 - 290
Target Start/End: Complemental strand, 37674014 - 37673887
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgttt 262  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||  ||||||    
T  37674014 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 37673915  T
Q  263 tctataatacccttaaccatttattatt 290  Q
    |||||||||||||||| |||||||||||    
T  37673914 tctataatacccttaatcatttattatt 37673887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 1646317 - 1646436
Alignment:
Q  193 attttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattatttc 292  Q
    |||||| ||||||||||| ||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1646317 attttggagaaattgcagcaaccaagaaactaaataaattttgttatttttgatgaaaatatgtgtgttttctataatacccttaatcatttattatttc 1646416  T
Q  293 attttattttcttctctctc 312  Q
    |||||||||| |||||||||    
T  1646417 attttatttttttctctctc 1646436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 34224431 - 34224378
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34224431 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 34224378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 242 - 311
Target Start/End: Complemental strand, 22388335 - 22388265
Alignment:
Q  242 ttgatgaaaatatgtgtgt--tttctataatacccttaaccatttattatttcattttattttcttctctct 311  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  22388335 ttgatgaaaatatgtgtgtgttttctataatacccttaatcatttattatttcattttatttt-ttctctct 22388265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 290
Target Start/End: Complemental strand, 39562162 - 39562037
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttc 264  Q
    ||||||||||||||||  |||| ||||  |||| | |||||| ||   | ||| |||||||||||||||| |||||||||| |||| ||| | ||||||     
T  39562162 tactccctccgtttcatgatacttgtcgcttttaaggaaattacacatatcaaaaaatcaaataaattttgttatttttgaagaaattatttttgttttt 39562063  T
Q  265 tataatacccttaaccatttattatt 290  Q
    | ||||||||||||||||||||||||    
T  39562062 tctaatacccttaaccatttattatt 39562037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 19976380 - 19976468
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaaatatgtg-tgttttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||||||||||||||||||||  || ||||||| ||| |||||| | |||||||||||||||||| | ||||||||||| ||| ||||    
T  19976380 accaagaaatcaaataaattttggtacttttgataaaattatgtgtttttttctataatacccttacctatttattattttattatatt 19976468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 1002997 - 1002922
Alignment:
Q  175 gtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa 250  Q
    |||||||||||||||||  |||||| || ||| ||   || |||||||||||||||||||||||||||||||||||    
T  1002997 gtttcaaaatacatgtcgcttttgaggatattacacatactaagaaatcaaataaattttattatttttgatgaaa 1002922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 35179164 - 35179090
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaaatatgtgtg--ttttctataatacccttaaccattta 285  Q
    |||||||||| ||||||||||| ||||||||||||||| | ||||||  |||||||||||| ||||||| |||||    
T  35179164 accaagaaatgaaataaattttgttatttttgatgaaattttgtgtgttttttctataataaccttaactattta 35179090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 18078104 - 18078193
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaaatatgtgtg--ttttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||| |||||||||||||||| ||||||||||||||  | | ||||  ||||||||||||| ||| ||||||||||| |||||| ||||    
T  18078104 accaaaaaatcaaataaattttgttatttttgatgaatttttttgtggattttctataatactcttgaccatttattaattcattctatt 18078193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 300
Target Start/End: Complemental strand, 32840401 - 32840312
Alignment:
Q  216 aagaaatcaaataaattttattatttttgatgaaaatatgtgtgt-----tttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||||||||||||||||| ||||||||||||||| | ||||| |     ||||||||||||| ||| | ||||||||||||||| ||||    
T  32840401 aagaaatcaaataaattttgttatttttgatgaaattctgtgtttttttctttctataataccattatcgatttattatttcattctatt 32840312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 295
Target Start/End: Original strand, 34242040 - 34242107
Alignment:
Q  228 aaattttattatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattatttcatt 295  Q
    ||||||| ||||||||||||||| | ||||| |||| | ||| ||||||| |||||||||||||||||    
T  34242040 aaattttgttatttttgatgaaattctgtgttttttttgtaacacccttacccatttattatttcatt 34242107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 14779832 - 14779914
Alignment:
Q  218 gaaatcaaataaattttattatttttgatgaaa--atatgtgtgttttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||| ||||||||||| |||||||||||||||  || ||||| ||||||||||||  ||||  |||||||||||||||| ||||    
T  14779832 gaaattaaataaatttttttatttttgatgaaattatttgtgttttttctataata--cttactcatttattatttcattatatt 14779914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 193
Target Start/End: Original strand, 39358144 - 39358174
Alignment:
Q  163 gatactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||||    
T  39358144 gatactccctccgtttcaaaatacatgtcca 39358174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 2183220 - 2183191
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  2183220 atactccctccgtttcaaaatacatgtcca 2183191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 5405259 - 5405230
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  5405259 atactccctccgtttcaaaatacatgtcca 5405230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 7608312 - 7608283
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  7608312 atactccctccgtttcaaaatacatgtcca 7608283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 19141065 - 19141094
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  19141065 atactccctccgtttcaaaatacatgtcca 19141094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 19141329 - 19141300
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  19141329 atactccctccgtttcaaaatacatgtcca 19141300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 4917839 - 4917899
Alignment:
Q  240 ttttgatgaaaatatgtgtgttttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||||| ||| ||||||| ||||||||||||  |||||  ||||||||||||||| ||||    
T  4917839 ttttgataaaattatgtgttttttctataataatcttaattatttattatttcattctatt 4917899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 8042284 - 8042256
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  8042284 tactccctccgtttcaaaatacatgtcca 8042256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 11841593 - 11841621
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  11841593 tactccctccgtttcaaaatacatgtcca 11841621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 44365419 - 44365391
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  44365419 tactccctccgtttcaaaatacatgtcca 44365391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 164 - 312
Target Start/End: Complemental strand, 21661813 - 21661663
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgtt 261  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||    
T  21661813 atactccctccctttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttattatttttgatgaaaatatgtgtgtgtt 21661714  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  21661713 ttctataatacctttaaccatttattatttcattttatttttttctctctc 21661663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 40122763 - 40122614
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgtt 261  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||  |||||    
T  40122763 atactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaaaaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 40122664  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctct 311  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40122663 ttctataatacccttaaccatttattatttcattttatttttttctctct 40122614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 164 - 312
Target Start/End: Complemental strand, 21670577 - 21670427
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgtt 261  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||  |||||    
T  21670577 atactccctccctttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaatttttttatttttgatgaaaatatgtgtgtgtt 21670478  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  21670477 ttctataatacctttaaccatttattatttcattttatttttttctctctc 21670427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 157 - 312
Target Start/End: Original strand, 25704643 - 25704800
Alignment:
Q  157 tttgttgatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--t 254  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||  |    
T  25704643 tttgtagatactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgt 25704742  T
Q  255 gtgtgttttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||    
T  25704743 gtgtgttttctataatacccttaatcatttattatttcattttatttttttttctctc 25704800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 164 - 312
Target Start/End: Complemental strand, 24706525 - 24706375
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgtt 261  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||  |||||    
T  24706525 atactccatccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 24706426  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  24706425 ttctataatacccttaatcatttattatttcattttatttttttctctctc 24706375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 161 - 312
Target Start/End: Original strand, 14261040 - 14261193
Alignment:
Q  161 ttgatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgt 258  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||| ||||||  |||||    
T  14261040 ttgatactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgataaaaatatgtgtgt 14261139  T
Q  259 gttttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||||||  |||||||||||||||||||||| |||||||||    
T  14261140 gttttctataatacccttaataatttattatttcattttatttttttctctctc 14261193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 164 - 312
Target Start/End: Original strand, 44568836 - 44568986
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgtt 261  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| |||||||| |||||||||  ||||||||    
T  44568836 atactccttccgtttcaaaatacatgtccattttgaagaaattgcactaaccaaaaaaccaaataaattttgttattttttatgaaaatatgtgtgtgtt 44568935  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  44568936 ttctataatacccttaatcatttattatttcattttatttttttctctctc 44568986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 162 - 312
Target Start/End: Original strand, 12071558 - 12071709
Alignment:
Q  162 tgatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtg 259  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||  ||||||||||| ||||||||||||||||||  ||||||    
T  12071558 tgatactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaataaactaaataaattttgttatttttgatgaaaatatgtgtgtg 12071657  T
Q  260 ttttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  12071658 ttttctataatacccttaatcatttattatttcattttatttt-ttctctctc 12071709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 164 - 302
Target Start/End: Original strand, 21310424 - 21310564
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgtt 261  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||  ||||||||    
T  21310424 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 21310523  T
Q  262 ttctataatacccttaaccatttattatttcattttatttt 302  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  21310524 ttctataatacccttaatcatttattatttcattttttttt 21310564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 163 - 312
Target Start/End: Complemental strand, 22321546 - 22321396
Alignment:
Q  163 gatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgt 260  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||| ||||||||||||  ||||    
T  22321546 gatactccttccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttttatgaaaatatgtgtgtgt 22321447  T
Q  261 tttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  22321446 tttctataatacccttaatcatttattatttcattttatttt-ttctctctc 22321396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 165 - 312
Target Start/End: Complemental strand, 34324860 - 34324711
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaa-tcaaataaattttattatttttgatgaaaata--tgtgtgtt 261  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| | || |||||||| ||||||||||||||||||  ||||||||    
T  34324860 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaactaaattaaattttgttatttttgatgaaaatatgtgtgtgtt 34324761  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  34324760 ttctataatacccttaatcatttattatttcattttatttt-ttctctctc 34324711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 167 - 302
Target Start/End: Original strand, 31892240 - 31892373
Alignment:
Q  167 ctccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttcta 266  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  31892240 ctccctccgtatcaaaatacatgttcattttaaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaatta--tgtgttttcta 31892337  T
Q  267 taatacccttaaccatttattatttcattttatttt 302  Q
    ||||||| || |||||||||||||||||| ||||||    
T  31892338 taatacctttgaccatttattatttcattctatttt 31892373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 165 - 312
Target Start/End: Complemental strand, 20249289 - 20249142
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgt-ttt 263  Q
    ||||| |||||||||||||||||||||||||||| | |||||| | ||||||||||| |||||||||||| |||||||||| |||| ||||||||| |||    
T  20249289 tactctctccgtttcaaaatacatgtccattttggataaattgtattaaccaagaaaccaaataaattttgttatttttgaagaaattatgtgtgtgttt 20249190  T
Q  264 ctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||    
T  20249189 ctataatacccttaaccatttattattttattctatttt-ttctctctc 20249142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 172 - 311
Target Start/End: Original strand, 50767871 - 50768012
Alignment:
Q  172 tccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgttttctataa 269  Q
    ||||||||||||||||| | ||||||  |||||||||| ||| ||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||    
T  50767871 tccgtttcaaaatacatattcattttagagaaattgcactaatcaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttttctataa 50767970  T
Q  270 tacccttaaccatttattatttcattttattttcttctctct 311  Q
    |||||||||  |||||||||||||||||||||| ||||||||    
T  50767971 tacccttaataatttattatttcattttatttttttctctct 50768012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 164 - 279
Target Start/End: Original strand, 1988035 - 1988151
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatg--tgtgtt 261  Q
    ||||||| || |||| |||||| ||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||  ||||||    
T  1988035 atactccatctgttttaaaatatatgtctatttgga-gaaattgcagtaactaagaaatcaaataaattttattatttttgatgaaattatgtatgtgtt 1988133  T
Q  262 ttctataatacccttaac 279  Q
    ||||||||||||||||||    
T  1988134 ttctataatacccttaac 1988151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 20714577 - 20714488
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaaatatgtgtg---ttttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||| |||||||||||||||| ||||||||||||||| ||||||||   |||||||||||| ||||||||||||||||||||||| ||||    
T  20714577 accaataaatcaaataaattttgttatttttgatgaaactatgtgtgtgtttttctataata-ccttaaccatttattatttcattatatt 20714488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 292
Target Start/End: Complemental strand, 26676843 - 26676714
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatat--gtgtgttt 262  Q
    ||||| |||||||||| ||||| | ||||||||||||||||| ||   |||||| |||||||||||| || | |||||| |||||| | |  |||| |||    
T  26676843 tactctctccgtttcacaatacttatccattttgaagaaattacacataccaaggaatcaaataaatgttgtcattttttatgaaattcttcgtgttttt 26676744  T
Q  263 tctataatacccttaaccatttattatttc 292  Q
    |||||||||||||||  |||||||||||||    
T  26676743 tctataatacccttactcatttattatttc 26676714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 21064834 - 21064899
Alignment:
Q  237 tatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattatttcattttatttt 302  Q
    |||||||||||||| |||||||||||| |||||||| |||||| ||||||||||||||| ||||||    
T  21064834 tatttttgatgaaattatgtgtgttttttataatactcttaactatttattatttcattctatttt 21064899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 295
Target Start/End: Complemental strand, 6129226 - 6129093
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgtt 261  Q
    ||||||||||||||||| ||||| | ||   ||||| |||||| ||   | |||||||||||||||||||| ||||||||||| |||   | ||| | ||    
T  6129226 atactccctccgtttcataatacttatcgcctttgatgaaattacacatatcaagaaatcaaataaattttgttatttttgataaaattctttgtatttt 6129127  T
Q  262 ttctataatacccttaaccatttattatttcatt 295  Q
    ||||| ||||||||||| ||||||||||||||||    
T  6129126 ttctacaatacccttaatcatttattatttcatt 6129093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 216 - 300
Target Start/End: Original strand, 32543532 - 32543617
Alignment:
Q  216 aagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttct-ataatacccttaaccatttattatttcattttatt 300  Q
    |||||| ||||||| |||| ||| ||||||||||| | | |||||||| | ||||||||||||| |||||||||||||||||||||    
T  32543532 aagaaaccaaataatttttgttaattttgatgaaattctttgtgtttttttataatacccttaatcatttattatttcattttatt 32543617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 300
Target Start/End: Original strand, 19692722 - 19692860
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgtttt 263  Q
    ||||| |||| |||||| ||||  | |||||||||||||||||  |   ||||||||||||||||||| || | |||||| |||||| | | ||||||||    
T  19692722 atacttcctctgtttcacaataattctccattttgaagaaattatacataccaagaaatcaaataaatgttgtcattttttatgaaattctttgtgtttt 19692821  T
Q  264 --ctataatacccttaaccatttattatttcattttatt 300  Q
      |||||||| |||||  |||||||||||||||| ||||    
T  19692822 ttctataatatccttactcatttattatttcattctatt 19692860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 300
Target Start/End: Original strand, 19703307 - 19703445
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgtttt 263  Q
    ||||| |||| |||||| ||||  | |||||||||||||||||  |   ||||||||||||||||||| || | |||||| |||||| | | ||||||||    
T  19703307 atacttcctctgtttcacaataattctccattttgaagaaattatacataccaagaaatcaaataaatgttgtcattttttatgaaattctttgtgtttt 19703406  T
Q  264 --ctataatacccttaaccatttattatttcattttatt 300  Q
      |||||||| |||||  |||||||||||||||| ||||    
T  19703407 ttctataatatccttactcatttattatttcattctatt 19703445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 19361662 - 19361700
Alignment:
Q  180 aaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  19361662 aaaatacatgtccattttggagaaattgcagtaaccaag 19361700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 25273305 - 25273339
Alignment:
Q  132 ttcgacataatgcttatcaatctcatttgttgata 166  Q
    |||||||||||||||||||||||||||||||||||    
T  25273305 ttcgacataatgcttatcaatctcatttgttgata 25273339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 48652268 - 48652305
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaa 250  Q
    |||||||||||||||||||||| |||||||||||||||    
T  48652268 accaagaaatcaaataaattttgttatttttgatgaaa 48652305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 51777687 - 51777755
Alignment:
Q  231 ttttattatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattatttcattttatt 300  Q
    |||| ||| ||||||| ||| | ||||| ||||||||||||| ||||||||||||||||||||| |||||    
T  51777687 tttttttaattttgataaaattctgtgt-ttttctataatactcttaaccatttattatttcatgttatt 51777755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 26170250 - 26170221
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  26170250 atactccctccgtttcaaaatacatgtcca 26170221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 35381157 - 35381128
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  35381157 atactccctccgtttcaaaatacatgtcca 35381128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 38416913 - 38416884
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  38416913 atactccctccgtttcaaaatacatgtcca 38416884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 47386549 - 47386520
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  47386549 atactccctccgtttcaaaatacatgtcca 47386520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 2760730 - 2760758
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  2760730 tactccctccgtttcaaaatacatgtcca 2760758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 2760989 - 2760961
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  2760989 tactccctccgtttcaaaatacatgtcca 2760961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 4467520 - 4467548
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  4467520 tactccctccgtttcaaaatacatgtcca 4467548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 19433358 - 19433386
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  19433358 tactccctccgtttcaaaatacatgtcca 19433386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 26169986 - 26170014
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  26169986 tactccctccgtttcaaaatacatgtcca 26170014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 29830343 - 29830371
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  29830343 tactccctccgtttcaaaatacatgtcca 29830371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 29830607 - 29830579
Alignment:
Q  163 gatactccctccgtttcaaaatacatgtc 191  Q
    |||||||||||||||||||||||||||||    
T  29830607 gatactccctccgtttcaaaatacatgtc 29830579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 38416650 - 38416678
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  38416650 tactccctccgtttcaaaatacatgtcca 38416678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 44232077 - 44232105
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  44232077 tactccctccgtttcaaaatacatgtcca 44232105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 45292094 - 45292066
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  45292094 tactccctccgtttcaaaatacatgtcca 45292066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 55209574 - 55209602
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  55209574 tactccctccgtttcaaaatacatgtcca 55209602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 55209836 - 55209808
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  55209836 tactccctccgtttcaaaatacatgtcca 55209808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 36881282 - 36881429
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttc 264  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  36881282 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgttttc 36881381  T
Q  265 tataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||    
T  36881382 tataatacccttaattatttattatttcattttatttttttctctctc 36881429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 164 - 312
Target Start/End: Original strand, 3383075 - 3383225
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgtt 261  Q
    ||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||  ||||||||    
T  3383075 atactccttccgtttcaaaatatatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 3383174  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  3383175 ttctataatacccttaaacatttattatttcattttatttttttctctctc 3383225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 164 - 312
Target Start/End: Original strand, 13364842 - 13364992
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgtt 261  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||  ||||||||    
T  13364842 atactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 13364941  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  13364942 ttctataatacccttaatcatttattatttcattttatttttttctctctc 13364992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 162 - 302
Target Start/End: Original strand, 29375135 - 29375277
Alignment:
Q  162 tgatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtg 259  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||  ||||||    
T  29375135 tgatactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttcttatttttgatgaaaatatgtgtgtg 29375234  T
Q  260 ttttctataatacccttaaccatttattatttcattttatttt 302  Q
    ||||||||||||||||||||||||||||||||| |||| ||||    
T  29375235 ttttctataatacccttaaccatttattatttctttttttttt 29375277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 198855 - 199004
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgttt 262  Q
    |||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| |||||||||||| |||||||||||||||  ||||||||||||    
T  198855 tactccctccgtttcaaaatacatgtccattttggagaaattgcactgaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttt 198954  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  198955 tctataatacccttaatcatttattatttcattttatttttttctctctc 199004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 158 - 312
Target Start/End: Complemental strand, 19241952 - 19241796
Alignment:
Q  158 ttgttgatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatg 255  Q
    ||||| |||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||| |||||||||||| |||||||||||||||  |||||    
T  19241952 ttgttcatactccctccgtttcaaaatacatgtccattttggtgaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatg 19241853  T
Q  256 tgtgttttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  19241852 tgtgttttctataatacccttaatcatttattatttcattttacttttttctctctc 19241796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 165 - 312
Target Start/End: Complemental strand, 23088208 - 23088059
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgttt 262  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||  ||||||    
T  23088208 tactccctctgtttcaaaatatatgtctattttgaagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 23088109  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  23088108 tctataatacccttaatcatttattatttcattttatttttttctctctc 23088059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 165 - 312
Target Start/End: Complemental strand, 46694387 - 46694238
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgttt 262  Q
    |||||||||||||||||||||||||||| ||||| |||||||||| ||| ||||||| |||||||||||| |||||||||||||||||||||  ||||||    
T  46694387 tactccctccgtttcaaaatacatgtcctttttggagaaattgcactaatcaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 46694288  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  46694287 tctataatacccttaatcatttattatttcattttatttttttctctctc 46694238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 164 - 312
Target Start/End: Original strand, 43750136 - 43750285
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgtt 261  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||| |||||||||||||||  |||||||||||    
T  43750136 atactcccttcgtttcaaaatacatgtccattttggagaaattggagtaaccaagaaaccaaataaattttgttatttttgatgaaattatatgtgtgtt 43750235  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  43750236 ttctataatacacttaaccatttattatttcattctatttt-ttctctctc 43750285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 32835235 - 32835138
Alignment:
Q  163 gatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgt 260  Q
    |||||||  ||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||| |||||||||    
T  32835235 gatactcaatccgtttcaaaatacatgtccattttggagaaattgcaataaccaagaaaacaaataaattttgttatttttgatgaaattatgtgtgt 32835138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 163 - 284
Target Start/End: Original strand, 13702767 - 13702890
Alignment:
Q  163 gatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgt 260  Q
    |||||||| ||| ||| |||||||||| | |||||| |||||||||||||||||||||| ||||||||||||  ||||||||||||||  |||||| |||    
T  13702767 gatactccatccattttaaaatacatgcctattttggagaaattgcagtaaccaagaaaccaaataaattttgatatttttgatgaaattatatgtttgt 13702866  T
Q  261 tttctataatacccttaaccattt 284  Q
    ||||||||||||| ||||||||||    
T  13702867 tttctataatacctttaaccattt 13702890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 27707441 - 27707363
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattattttt 243  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||    
T  27707441 tactccctccgtttcgaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttattttt 27707363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 44522491 - 44522567
Alignment:
Q  215 caagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattattt 291  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||||||||  |||||||||||||||||    
T  44522491 caagaaatcaaataaattttattattttttatgaaatcatgtgttttttctataatacttttaaccatttattattt 44522567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 164 - 267
Target Start/End: Original strand, 37293436 - 37293539
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgtttt 263  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| ||   |||||| |||||||||||| || | ||||||||||||| | ||||| ||||    
T  37293436 atactccctccgtttcacaatacttgtccattttgaagaaattacacataccaaggaatcaaataaatgttgtcatttttgatgaaattctgtgtttttt 37293535  T
Q  264 ctat 267  Q
    ||||    
T  37293536 ctat 37293539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 12094581 - 12094635
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12094581 atactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 12094635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 37780988 - 37781069
Alignment:
Q  216 aagaaatcaaataaattttattatttttgatgaaaatatgtgtg--ttttctataatacccttaaccatttattatttcatt 295  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||  |||||||||||||  |||||||||||||||||||||    
T  37780988 aagaaattaaataaattttattatttttgatgaaattctgtgtgttttttctataatactattaaccatttattatttcatt 37781069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 44277509 - 44277455
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  44277509 atactccctccgtttcaaaatacatgtctattttggagaaattgcagtaaccaag 44277455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 19911509 - 19911562
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  19911509 tactccctccgtttcaaaatacatgttcattttggagaaattgcagtaaccaag 19911562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 27707172 - 27707119
Alignment:
Q  256 tgtgttttctataatacccttaaccatttattatttcattttattttcttctct 309  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||    
T  27707172 tgtgttttctataatatccttaaccatttattatttctttttatttttttctct 27707119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 38805245 - 38805298
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    |||||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  38805245 tactccctccgttttaaaatacatgtccattttagagaaattgcagtaaccaag 38805298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 48963155 - 48963225
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttat 236  Q
    ||||||||||||||||||||||||| || |||||| |||||||||  ||||||| ||||||||||| ||||||    
T  48963155 atactccctccgtttcaaaatacatatctattttggagaaattgc--taaccaataaatcaaataatttttat 48963225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 1455374 - 1455297
Alignment:
Q  216 aagaaatcaaataaattttattatttttgatgaaaatatgtgtgtt--ttctataatacccttaaccatttattattt 291  Q
    ||||||||||||||||||| ||||||||||| ||| ||| ||||||  ||||||||| | ||| ||||||||||||||    
T  1455374 aagaaatcaaataaattttgttatttttgataaaattatttgtgtttcttctataattctcttcaccatttattattt 1455297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 19897152 - 19897067
Alignment:
Q  217 agaaatcaaataaattttattatttttgatgaaaatatgtgtgtttt--ctataatacccttaaccatttattatttcattttatt 300  Q
    |||||||||||||||||| |||||||| |||||| | | ||||||||  ||||||||||||||  | |||||||||||||| ||||    
T  19897152 agaaatcaaataaattttgttattttttatgaaattctttgtgttttttctataatacccttactcttttattatttcattctatt 19897067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 26105079 - 26105180
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaaatatgt-gtgttttct-ataatacccttaaccatttattatttcattttattttcttctctc 310  Q
    ||||| |||||||||||||||| |||||||| ||||   | | | ||||||| | | |||||||||||||||||||||||||||| |||||| |||||||    
T  26105079 accaataaatcaaataaattttgttatttttaatgatttttttttgtgtttttttacaatacccttaaccatttattatttcattatatttttttctctc 26105178  T
Q  311 tc 312  Q
    ||    
T  26105179 tc 26105180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 300
Target Start/End: Complemental strand, 53559880 - 53559750
Alignment:
Q  172 tccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctata--a 269  Q
    ||||||||| ||||| |||   ||||||||||||| ||   | ||||||| ||||||||| || ||||||||||||||| | | |||||||| | ||  |    
T  53559880 tccgtttcacaatacttgttgcttttgaagaaattacacatatcaagaaaacaaataaatgttgttatttttgatgaaattctctgtgttttatttacga 53559781  T
Q  270 tacccttaaccatttattatttcattttatt 300  Q
    || ||||| || |||||||||||||||||||    
T  53559780 tatccttacccgtttattatttcattttatt 53559750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 19912216 - 19912174
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaatt 206  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  19912216 atactccctccgtttcaaaatacatgtccattttagagaaatt 19912174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 38806383 - 38806341
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaatt 206  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  38806383 atactccctccgtttcaaaatacatgtccattttagagaaatt 38806341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 48820512 - 48820444
Alignment:
Q  182 aatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa 250  Q
    |||||||||  |||||| ||||||| | ||| |||| ||| |||||||||||| |||||||||||||||    
T  48820512 aatacatgtttattttggagaaattacggtatccaataaaccaaataaattttgttatttttgatgaaa 48820444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 193
Target Start/End: Complemental strand, 42490461 - 42490430
Alignment:
Q  162 tgatactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||||    
T  42490461 tgatactccctccgtttcaaaatacatgtcca 42490430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 18355868 - 18355906
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaa 203  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  18355868 tactccctccgtttcacaatacttgtccattttgaagaa 18355906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 300
Target Start/End: Original strand, 24064315 - 24064361
Alignment:
Q  254 tgtgtgttttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||| |||||||||||||||||| ||||||||||||| ||| ||||    
T  24064315 tgtgttttttctataatacccttacccatttattattttattctatt 24064361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 12095464 - 12095423
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaatt 206  Q
    ||||||||||||||||||||| |||||||||||  |||||||    
T  12095464 tactccctccgtttcaaaatatatgtccattttagagaaatt 12095423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 27010473 - 27010502
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  27010473 atactccctccgtttcaaaatacatgtcca 27010502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 27010737 - 27010708
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  27010737 atactccctccgtttcaaaatacatgtcca 27010708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 44276775 - 44276816
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaatt 206  Q
    ||||| |||||||||||||||||||||||||||  |||||||    
T  44276775 tactctctccgtttcaaaatacatgtccattttagagaaatt 44276816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 4226716 - 4226759
Alignment:
Q  174 cgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||    
T  4226716 cgtttcaaaatacatgtcg-ttttggagaaattgcagtaaccaag 4226759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 6910596 - 6910568
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  6910596 tactccctccgtttcaaaatacatgtcca 6910568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 13499597 - 13499569
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  13499597 tactccctccgtttcaaaatacatgtcca 13499569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 19823900 - 19823928
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  19823900 tactccctccgtttcaaaatacatgtcca 19823928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 20765458 - 20765430
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  20765458 tactccctccgtttcaaaatacatgtcca 20765430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 42761483 - 42761511
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  42761483 tactccctccgtttcaaaatacatgtcca 42761511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 42761745 - 42761717
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  42761745 tactccctccgtttcaaaatacatgtcca 42761717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 8e-61; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 8626482 - 8626631
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgttt 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||  |||||||||    
T  8626482 tactccctccgtttcaaaatacatgtccattttgaagaaattgcattaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 8626581  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  8626582 tctataatacccttaatcatttattatttcattttatttttttctctctc 8626631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 164 - 312
Target Start/End: Original strand, 29260191 - 29260341
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgtt 261  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||  ||||||||    
T  29260191 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 29260290  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  29260291 ttctataatacccttaatcatttattatttcattttatttttttctctctc 29260341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 164 - 302
Target Start/End: Original strand, 7761300 - 7761438
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgtttt 263  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||  ||||||||||| ||||||||||||||||||||||||||||    
T  7761300 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaactaaataaattttgttatttttgatgaaaatatgtgtgtttt 7761399  T
Q  264 ctataatacccttaaccatttattatttcattttatttt 302  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  7761400 ctataatacccttaatcatttattatttcattttatttt 7761438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 164 - 312
Target Start/End: Original strand, 1605578 - 1605727
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgtt 261  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||  ||||||||    
T  1605578 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 1605677  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  1605678 ttctataatacccttaatcatttattatttcattttatttt-ttctctctc 1605727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 172 - 312
Target Start/End: Complemental strand, 30734753 - 30734611
Alignment:
Q  172 tccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgttttctataa 269  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||  |||||||||||||    
T  30734753 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttttctataa 30734654  T
Q  270 tacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  30734653 tacccttaatcatttattatttcattttatttttttctctctc 30734611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 162 - 312
Target Start/End: Original strand, 13757205 - 13757356
Alignment:
Q  162 tgatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtg 259  Q
    |||||||| |||||||||||||||||||||||||||| ||||||| || ||||||||||| |||||||||||| ||||||||||||||||||  ||||||    
T  13757205 tgatactctctccgtttcaaaatacatgtccattttggagaaattacactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtg 13757304  T
Q  260 ttttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||||| || |||||||||||||||||||| |||||||||    
T  13757305 ttttctataatacccttaatcaattattatttcattttatttt-ttctctctc 13757356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 30734879 - 30734771
Alignment:
Q  171 ctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataat 270  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  30734879 ctccgtttcaaaatacatgtccattttgaagaaattgcagtaacaaaaaaatcaaataaattttgttatttttgatgaaattatgtgtgttttctataat 30734780  T
Q  271 acccttaac 279  Q
    |||||||||    
T  30734779 acccttaac 30734771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 164 - 312
Target Start/End: Complemental strand, 15064972 - 15064823
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgtt 261  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||||||| |||||||||||||||  || ||||||||    
T  15064972 atactccctccgtttcaaaatacatgtccattttagagaaattgcagcaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtgtt 15064873  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    || |||| |||||||||||||||||||||| ||| |||||| |||||||||    
T  15064872 ttttatactacccttaaccatttattatttgattatatttt-ttctctctc 15064823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 17942442 - 17942593
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaata--aattttattatttttgatgaaaatatgt--gtg 259  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||    |||| ||||||||||||||| |||||  |||    
T  17942442 atactcccttcgtttcaaaatacatgtccatttttgagaaattgcagtaaccaagaaaccaaatatttttttttttatttttgatgaaattatgtgcgtg 17942541  T
Q  260 ttttctataatacccttaaccatttattatttcattttattttcttctctct 311  Q
    || |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17942542 ttctctataatacccttaaccatttattatttcattttatttttttctctct 17942593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 31559998 - 31559865
Alignment:
Q  180 aaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtg--tgttttctataataccctta 277  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||    
T  31559998 aaaatacatgtccattttggagaaattgcattaaccaaaaaatcaaataaattttgttatttttgatgaaaatatgtgtatgttttctgtaataccctta 31559899  T
Q  278 accatttattatttcattttattttcttctctct 311  Q
    | |||||||||||||||||| ||||  |||||||    
T  31559898 atcatttattatttcattttttttttctctctct 31559865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 4129435 - 4129576
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtg--tgttt 262  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||||||||        ||||||||| |||||||| |||||||||||||  |||||    
T  4129435 tactccctccgtttcaaaatacatatccactttggagaaattgcagtaaccaa--------ataaattttgttattttttatgaaaatatgtgtgtgttt 4129526  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4129527 tctataatacccttaaccatttattatttcattttatttttttctctctc 4129576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 165 - 302
Target Start/End: Original strand, 8235624 - 8235763
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgttt 262  Q
    |||||||||  ||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||| ||| |||||||| |||| |  || |||||||||    
T  8235624 tactccctctattttaaaatacatgtacattttgaagaaattgcagtaaccaagaaacgaaataaaatttgttattttttatgatattatgtgtgtgttt 8235723  T
Q  263 tctataatacccttaaccatttattatttcattttatttt 302  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  8235724 tctataatacccttaatcatttattatttcattctatttt 8235763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 162 - 300
Target Start/End: Original strand, 14286986 - 14287125
Alignment:
Q  162 tgatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtg-tgt 260  Q
    ||||||||||||||||||| ||||| |||   ||||||  ||||| ||    |||| |||||||||||||||| |||||||| |||||| | |||| | |    
T  14286986 tgatactccctccgtttcacaatacttgtagtttttgagaaaattacacatgccaataaatcaaataaattttgttattttttatgaaattctgtgcttt 14287085  T
Q  261 tttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  14287086 tttctataatacccttacccctttattatttcattttatt 14287125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 19996769 - 19996715
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  19996769 atactccctccgtttcaaaatacatgtctattttggagaaattgcagtaaccaag 19996715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 26860819 - 26860902
Alignment:
Q  215 caagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||||||||||||| |||| ||||||||||||||| | ||||| | |||||||  ||||||||||||||||||||| ||| ||||    
T  26860819 caagaaatcaaataactttttttatttttgatgaaattttgtgtttattctata--acccttaaccatttattattttattctatt 26860902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 216 - 300
Target Start/End: Complemental strand, 21277659 - 21277574
Alignment:
Q  216 aagaaatcaaataaattttattatttttgatgaaaatatgtgtg-ttttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||||||||||||||||| |||||||| |||||||| | |||| |||||||||||||||||||  ||||| || |||||| ||||    
T  21277659 aagaaatcaaataaattttgttattttttatgaaaatttatgtgtttttctataatacccttaattatttagtacttcattctatt 21277574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 11370711 - 11370630
Alignment:
Q  216 aagaaatcaaataaattttattatttttgatgaaaat--atgtgtgttttctataatacccttaaccatttattatttcatt 295  Q
    ||||||||||||||||||| ||||||||||||| | |   ||||| |||| |||||||| ||||||||||||||||| ||||    
T  11370711 aagaaatcaaataaattttgttatttttgatgatattcattgtgttttttttataatactcttaaccatttattattccatt 11370630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 33845505 - 33845449
Alignment:
Q  220 aatcaaataaattttattatttttgatgaaaatatgtgtgttttctataataccctt 276  Q
    ||||||||||||||| ||||||||||||||| ||||| | ||||||||| |||||||    
T  33845505 aatcaaataaattttgttatttttgatgaaattatgtattttttctatagtaccctt 33845449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 293
Target Start/End: Original strand, 3798151 - 3798233
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaa--aatatgtgtgttttctataatacccttaaccatttattatttca 293  Q
    ||||| |||||||||||||||| |||||||| |||||   || ||||| |||||||||| |||||||  ||||||||||||||    
T  3798151 accaaaaaatcaaataaattttgttatttttcatgaagttatttgtgttttttctataacacccttacacatttattatttca 3798233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 19996321 - 19996363
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaatt 206  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  19996321 atactccctccgtttcaaaatacatgtccattttagagaaatt 19996363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 1814594 - 1814680
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa 250  Q
    ||||||| ||||||||| ||||| ||||  ||||||  ||||| ||   | |||||||||||||||| ||| |||||||||||||||    
T  1814594 atactccatccgtttcacaatacttgtcgcttttgagaaaattacacatatcaagaaatcaaataaactttgttatttttgatgaaa 1814680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 4147930 - 4147959
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  4147930 atactccctccgtttcaaaatacatgtcca 4147959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 18668687 - 18668716
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  18668687 atactccctccgtttcaaaatacatgtcca 18668716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 18668951 - 18668922
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  18668951 atactccctccgtttcaaaatacatgtcca 18668922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 19087957 - 19087986
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  19087957 atactccctccgtttcaaaatacatgtcca 19087986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 19088221 - 19088192
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  19088221 atactccctccgtttcaaaatacatgtcca 19088192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 20437016 - 20437045
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  20437016 atactccctccgtttcaaaatacatgtcca 20437045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 24623940 - 24623969
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  24623940 atactccctccgtttcaaaatacatgtcca 24623969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 32414942 - 32414913
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  32414942 atactccctccgtttcaaaatacatgtcca 32414913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 32420783 - 32420754
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  32420783 atactccctccgtttcaaaatacatgtcca 32420754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 32671815 - 32671844
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  32671815 atactccctccgtttcaaaatacatgtcca 32671844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 22055034 - 22055006
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  22055034 tactccctccgtttcaaaatacatgtcca 22055006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 25476070 - 25476042
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  25476070 tactccctccgtttcaaaatacatgtcca 25476042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 8e-61; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 161 - 312
Target Start/End: Complemental strand, 40783938 - 40783785
Alignment:
Q  161 ttgatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gt 258  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||  ||    
T  40783938 ttgatactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgt 40783839  T
Q  259 gttttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  40783838 gttttctataatacccttaatcatttattatttcattttatttttttctctctc 40783785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 165 - 312
Target Start/End: Complemental strand, 47038127 - 47037980
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttc 264  Q
    |||||| ||||||||||||||||||||||||||| |||||||| | |||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47038127 tactccatccgtttcaaaatacatgtccattttggagaaattgtactaactaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgttttc 47038028  T
Q  265 tataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  47038027 tataatacccttaatcatttattatttcattttatttttttctctctc 47037980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 165 - 312
Target Start/End: Complemental strand, 23045556 - 23045407
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgttt 262  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||  ||||||    
T  23045556 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 23045457  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  23045456 tctataatacccttaatcatttattatttcattttatttttttctctctc 23045407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 284333 - 284482
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgttt 262  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||  ||||||||||||    
T  284333 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatatgtgtgttt 284432  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||| ||||||||||||||||||| |||  ||||||||    
T  284433 tctataatacccttaatcatttattatttcattttacttttctctctctc 284482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 165 - 302
Target Start/End: Complemental strand, 24772182 - 24772043
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtg--ttt 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| ||||||||  |||    
T  24772182 tactccctccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtattt 24772083  T
Q  263 tctataatacccttaaccatttattatttcattttatttt 302  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  24772082 tctataatacccttaaccatttattattttattctatttt 24772043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 321626 - 321775
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgttt 262  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||  |||||||||    
T  321626 tactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 321725  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||| |||||| ||||||||||||||||||||||| || ||||||    
T  321726 tctataatatccttaatcatttattatttcattttatttttttttctctc 321775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 166 - 302
Target Start/End: Complemental strand, 27211240 - 27211102
Alignment:
Q  166 actccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgtttt 263  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||| ||||  |||||||||||||    
T  27211240 actccctccgtttcaaaatacatgtccattttggagaaattgcaataaccaagaaaccaaataaattttgttatttttgaggaaattatatgtgtgtttt 27211141  T
Q  264 ctataatacccttaaccatttattatttcattttatttt 302  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  27211140 ctataatacccttaaccatttattattttattctatttt 27211102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 46771644 - 46771776
Alignment:
Q  172 tccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgttttctataa 269  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||  || ||||||||||||||||    
T  46771644 tccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaattaaataaattttgttatttttgatgaaattatgtgtgtgttttctataa 46771743  T
Q  270 tacccttaaccatttattatttcattttatttt 302  Q
    |||||||||||||||||| ||||||| ||||||    
T  46771744 tacccttaaccatttattttttcattctatttt 46771776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 164 - 302
Target Start/End: Original strand, 23526239 - 23526379
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgtt 261  Q
    ||||||| ||| ||||||||||||||| ||||||| |||||||||||||| ||||||| |||||||||||| |||||||||||||||  || ||||||||    
T  23526239 atactccttccatttcaaaatacatgttcattttggagaaattgcagtaatcaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtgtt 23526338  T
Q  262 ttctataatacccttaaccatttattatttcattttatttt 302  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  23526339 ttctataatacccttaaccatttattatttcattctatttt 23526379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 52037382 - 52037252
Alignment:
Q  180 aaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataatacccttaac 279  Q
    ||||||||||||||||||  |||||||||| || |||| ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  52037382 aaaatacatgtccattttagagaaattgcattatccaaaaaaccaaataaattttattatttttgataaaattatgtgtgttttctataatactcttaac 52037283  T
Q  280 catttattatttcattttattttcttctctct 311  Q
    |||||||||||||||| |||||| ||||||||    
T  52037282 catttattatttcattctatttt-ttctctct 52037252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 185 - 302
Target Start/End: Original strand, 33082765 - 33082884
Alignment:
Q  185 acatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtg--ttttctataatacccttaaccat 282  Q
    ||||||| |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  33082765 acatgtctattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaattatgtgtgtattttctataatacccttaaccat 33082864  T
Q  283 ttattatttcattttatttt 302  Q
    ||||||||| ||| ||||||    
T  33082865 ttattattttattctatttt 33082884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 311
Target Start/End: Original strand, 1749314 - 1749455
Alignment:
Q  172 tccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgttttctataa 269  Q
    ||||||| ||||||||| |||||||  || ||||  |||||| |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  1749314 tccgttttaaaatacatttccatttaaaaaaaatcacagtaatcaagaaatcaaataaattttgttatttttgatgaaattatatgtgtgttttctataa 1749413  T
Q  270 tacccttaaccatttattatttcattttattttcttctctct 311  Q
    || | ||||||||||||||||| ||| ||||||  |||||||    
T  1749414 tagcattaaccatttattattttattctatttttctctctct 1749455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 1838053 - 1837978
Alignment:
Q  216 aagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattattt 291  Q
    ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||    
T  1838053 aagaaatcaaataaattttgttatttttgatgaaattatgtgttttttctataatacccttacccatttattattt 1837978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 52478016 - 52478103
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattatttcattttatt 300  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||| |||||||||||| ||||||  |||||| |||||||| ||||    
T  52478016 accaagaaatcaaataaattttgttatttttgatgaaattttgtgttttttctataataaccttaaaaatttatcatttcattctatt 52478103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 3943059 - 3943113
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3943059 atactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 3943113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 9588669 - 9588723
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9588669 atactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 9588723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 13985044 - 13984991
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  13985044 tactccatccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 13984991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 41959078 - 41959131
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  41959078 tactccctccgtttcaaaatacatgtccattttggagaaattgcaataaccaag 41959131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 31004012 - 31003926
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaaatatgtgtgtttt--ctataatacccttaaccatttattatttcattttatt 300  Q
    |||||||||||||||||||||||||   ||| |||||| ||||||| ||||  |||||||||||||||||||||||||||| ||| ||||    
T  31004012 accaagaaatcaaataaattttatt---tttaatgaaagtatgtgtattttttctataatacccttaaccatttattatttaattctatt 31003926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 292
Target Start/End: Complemental strand, 40261549 - 40261419
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtg---tt 261  Q
    |||||||||||||||| |||||||||   ||||||  || || ||   |||||||||||||||||||||| ||| ||||||||||| |  |||||   ||    
T  40261549 tactccctccgtttcacaatacatgttgcttttgagaaatttacacataccaagaaatcaaataaattttgttaattttgatgaaattgcgtgtgttttt 40261450  T
Q  262 ttctataatacccttaaccatttattatttc 292  Q
    |||||||||| | ||||||||||||||||||    
T  40261449 ttctataatatcattaaccatttattatttc 40261419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 300
Target Start/End: Complemental strand, 51065033 - 51064893
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttc 264  Q
    |||||||||||||||| ||||| |||||||||| |||||||| ||   |||||| |||||||||||| || | ||||||||||||| | | ||||||||     
T  51065033 tactccctccgtttcacaatacttgtccattttaaagaaattacacataccaaggaatcaaataaatgttgtcatttttgatgaaattctttgtgttttt 51064934  T
Q  265 t-----ataatacccttaaccatttattatttcattttatt 300  Q
    |     ||||||||||||  | |||||||||||||| ||||    
T  51064933 tctataataatacccttactcgtttattatttcattatatt 51064893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 7765072 - 7765154
Alignment:
Q  224 aaataaattttattatttttgatgaaa--atatgtgtgttttctataatacccttaaccatttattatttcattttattttct 304  Q
    ||||||||||| ||||||||| |||||  ||||||||||||||  |||||||| |||||||||||||||| ||||| ||||||    
T  7765072 aaataaattttgttatttttggtgaaattatatgtgtgttttccgtaatacccataaccatttattatttaatttttttttct 7765154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 34458950 - 34458863
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||||||||||||||||||||  ||||||| |||||| | ||||| |||||||||||| |||||   ||||||||||||||| ||||    
T  34458950 accaagaaatcaaataaatttttctattttttatgaaattctgtgttttttctataataaccttactaatttattatttcattctatt 34458863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 3657125 - 3657199
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaaatatg--tgtgttttctataatacccttaaccattta 285  Q
    |||||||||||||||||||||| |||||||| |||||| | ||  ||| |||||||||||| |||||||||||||    
T  3657125 accaagaaatcaaataaattttgttatttttaatgaaattttgtatgttttttctataataaccttaaccattta 3657199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 44227847 - 44227889
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaatt 206  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  44227847 atactccctccgtttcaaaatacatgtccattttggagaaatt 44227889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 44228282 - 44228228
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||||    
T  44228282 atactacctccatttcaaaatacatgtccattttggagaaattgctgtaaccaag 44228228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 1168369 - 1168414
Alignment:
Q  173 ccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    |||||||||||||||||||  |||||||||||||||||||||||||    
T  1168369 ccgtttcaaaatacatgtcgtttttgaagaaattgcagtaaccaag 1168414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 18396749 - 18396832
Alignment:
Q  219 aaatcaaataaattttattatttttgatgaaaatatgtgtg--ttttctataatacccttaaccatttattatttcattttatt 300  Q
    |||| ||||||||||| |||||||| |||||| ||||||||  ||||||||||||   ||||||||| ||||||||||| ||||    
T  18396749 aaattaaataaattttgttattttttatgaaattatgtgtggtttttctataatatatttaaccattcattatttcattctatt 18396832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 292
Target Start/End: Original strand, 25929113 - 25929241
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgtttt 263  Q
    ||||||| || |||||| ||||| | ||  |||||||||| || ||   ||||| |||| ||||||||||| ||| ||||||| ||| | ||||| ||||    
T  25929113 atactccatctgtttcacaatacttatcgcttttgaagaatttacacataccaaaaaattaaataaattttgttaattttgattaaattctgtgtttttt 25929212  T
Q  264 ctataatacccttaaccatttattatttc 292  Q
    |||  ||| ||||||||||||||||||||    
T  25929213 ctacgatatccttaaccatttattatttc 25929241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 40562797 - 40562733
Alignment:
Q  225 aataaattttattatttttgatgaaa-atatgtgtgttttctataatacccttaaccatttatta 288  Q
    |||||||||| ||||||||||| ||  |||| |||||||||||||||||| ||||||||||||||    
T  40562797 aataaattttgttatttttgataaattatatatgtgttttctataataccattaaccatttatta 40562733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 300
Target Start/End: Complemental strand, 27143239 - 27143151
Alignment:
Q  215 caagaaatcaaataaattttattatttttgatgaaaatatgtg---tgttttctataatacccttaaccatttattatttcattttatt 300  Q
    |||||||||||||||||||| |||||||||| |||| |  |||   | ||||||||||||  ||||| |||||||||||||||| ||||    
T  27143239 caagaaatcaaataaattttgttatttttgaggaaattccgtgagtttttttctataatattcttaatcatttattatttcattctatt 27143151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 41959851 - 41959809
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaatt 206  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  41959851 atactccctccgtttcaaaatacatgtccattttagagaaatt 41959809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 3943804 - 3943763
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaatt 206  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  3943804 tactccctccgtttcaaaatacatgtccattttagagaaatt 3943763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 24876636 - 24876699
Alignment:
Q  236 ttatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||||||||||| | ||||||| |||||||||||||| || ||||||||| |||||||| ||||    
T  24876636 ttatttttgatgatattatgtgt-ttttctataatacctttgaccatttatcatttcattctatt 24876699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 40564293 - 40564241
Alignment:
Q  179 caaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaat 231  Q
    ||||||| |||||||||||| | |||| ||||||||||||||| |||||||||    
T  40564293 caaaatatatgtccattttggaaaaatcgcagtaaccaagaaaccaaataaat 40564241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 9589674 - 9589631
Alignment:
Q  163 gatactccctccgtttcaaaatacatgtccattttgaagaaatt 206  Q
    ||||||||||||||||||||||||||||| |||||  |||||||    
T  9589674 gatactccctccgtttcaaaatacatgtctattttagagaaatt 9589631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 23526517 - 23526478
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaa 203  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  23526517 atactccctccgtttcataatacttgtccattttgaagaa 23526478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 193
Target Start/End: Original strand, 30701715 - 30701746
Alignment:
Q  162 tgatactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||||    
T  30701715 tgatactccctccgtttcaaaatacatgtcca 30701746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 31061659 - 31061594
Alignment:
Q  236 ttatttttgatgaaaatatgtgtgttttct--ataatacccttaaccatttattatttcattttatt 300  Q
    |||||||| |||||| |||||||||||| |  |||||||||| ||||||||||||||||||| ||||    
T  31061659 ttattttttatgaaattatgtgtgttttttccataataccct-aaccatttattatttcattatatt 31061594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 10845479 - 10845513
Alignment:
Q  163 gatactccctccgtttcaaaatacatgtccatttt 197  Q
    ||||||| |||||||||||||||||||||||||||    
T  10845479 gatactcactccgtttcaaaatacatgtccatttt 10845513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 6402673 - 6402644
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  6402673 atactccctccgtttcaaaatacatgtcca 6402644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 11641066 - 11641095
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  11641066 atactccctccgtttcaaaatacatgtcca 11641095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 36399361 - 36399332
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  36399361 atactccctccgtttcaaaatacatgtcca 36399332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 36757485 - 36757514
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  36757485 atactccctccgtttcaaaatacatgtcca 36757514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 37926900 - 37926945
Alignment:
Q  255 gtgtgttttctataatacccttaaccatttattatttcattttatt 300  Q
    |||| ||||||||||||||||| || |||||||| |||||||||||    
T  37926900 gtgttttttctataatacccttgacaatttattacttcattttatt 37926945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 40771771 - 40771800
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  40771771 atactccctccgtttcaaaatacatgtcca 40771800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 40772035 - 40772006
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  40772035 atactccctccgtttcaaaatacatgtcca 40772006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 16120702 - 16120674
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  16120702 tactccctccgtttcaaaatacatgtcca 16120674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 52024288 - 52024260
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  52024288 tactccctccgtttcaaaatacatgtcca 52024260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 167 - 312
Target Start/End: Complemental strand, 36453399 - 36453252
Alignment:
Q  167 ctccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtg--ttttc 264  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||    
T  36453399 ctccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttattatttttgatgaaaatatgtgtgttttttc 36453300  T
Q  265 tataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  36453299 tataatacccttaatcatttattatttcattttatttttttctctctc 36453252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 164 - 312
Target Start/End: Original strand, 27813810 - 27813960
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatg--tgtgtt 261  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||  ||||||    
T  27813810 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtatgtgtt 27813909  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  27813910 ttctataatacccttaatcatttattatttcattttatttttttctctctc 27813960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 164 - 312
Target Start/End: Original strand, 10981507 - 10981657
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgtt 261  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||  ||||||||    
T  10981507 atactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 10981606  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  10981607 ttctataatacccttaatcatttattatttcattttatttttctctctctc 10981657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 40348960 - 40349109
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgttt 262  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  40348960 tactccttccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 40349059  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  40349060 tctataatacccttaatcatttattatttcattttatttttctctctctc 40349109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 165 - 312
Target Start/End: Complemental strand, 25614628 - 25614481
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttc 264  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| ||||||| ||| |||||||||||| |||||||||||||||||||||||||||||    
T  25614628 tactccttccgtttcaaaatacatgtccattttggagaaattgcactaaccaaaaaaccaaataaattttgttatttttgatgaaaatatgtgtgttttc 25614529  T
Q  265 tataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |  ||||||||||| ||||||||||||||||||||||| |||||||||    
T  25614528 tgaaatacccttaatcatttattatttcattttatttttttctctctc 25614481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 165 - 302
Target Start/End: Original strand, 47110451 - 47110588
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttc 264  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  47110451 tactccctccatttcaaaatacatgtccattttggagaaattgcactaaccaagaaacaaaataaattttgttatttttgatgaaaatatgtgtgttttc 47110550  T
Q  265 tataatacccttaaccatttattatttcattttatttt 302  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  47110551 tataatacccttaatcatttattattttattttatttt 47110588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 16360438 - 16360511
Alignment:
Q  219 aaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattatttc 292  Q
    |||||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||    
T  16360438 aaatcaaataaattttgttatttttgatgaaattctgtgttttttctataatacccttaaccatttattatttc 16360511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 16662146 - 16662231
Alignment:
Q  215 caagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattatttcattttatt 300  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| ||| ||||    
T  16662146 caagaaataaaataaattttgttatttttgatgaaaatttgtgttttttttataatacccttaaccatttattattttattatatt 16662231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 17636506 - 17636591
Alignment:
Q  215 caagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattatttcattttatt 300  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| ||| ||||    
T  17636506 caagaaataaaataaattttgttatttttgatgaaaatttgtgttttttttataatacccttaaccatttattattttattatatt 17636591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 213 - 295
Target Start/End: Original strand, 3091565 - 3091649
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaaatatgtgtgtttt--ctataatacccttaaccatttattatttcatt 295  Q
    ||||| |||||||||||||||| ||||||||||||||| | | ||||||||  ||||||||||||||||||||||||||||||||    
T  3091565 accaaaaaatcaaataaattttgttatttttgatgaaattctttgtgttttttctataatacccttaaccatttattatttcatt 3091649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 25060187 - 25060133
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25060187 atactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 25060133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 300
Target Start/End: Original strand, 37983179 - 37983289
Alignment:
Q  188 tgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataatacccttaaccatttatt 287  Q
    |||||||||||| |||||| ||   | |||||||||||||||||||| |||||||||||||||   | | |||||| ||||||||| |||||||||||||    
T  37983179 tgtccattttgaggaaattacacatatcaagaaatcaaataaattttgttatttttgatgaaa--ttttatgttttttataatacctttaaccatttatt 37983276  T
Q  288 atttcattttatt 300  Q
    |||||||| ||||    
T  37983277 atttcattatatt 37983289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 7743625 - 7743542
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaaatatgtgtgt-tttctataatacccttaaccatttattatttcatt 295  Q
    ||||||| |||||||||||||| ||||||||||||||| ||||||| | ||||||||||||| ||||  |||||||||||||||    
T  7743625 accaagatatcaaataaattttgttatttttgatgaaattatgtgtttctttctataataccgttaattatttattatttcatt 7743542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 2911602 - 2911548
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  2911602 atactccctccatttcaaaatacatgtccattttggagaaattgcagtaaccaag 2911548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 27942256 - 27942177
Alignment:
Q  225 aataaattttattatttttgatgaaaatatgtgtgtttt--ctataatacccttaaccatttattatttcattttatttt 302  Q
    |||||||||| |||||||| |||| | ||||||||||||  |||||||||| ||||||||||||||||||||| ||||||    
T  27942256 aataaatttttttatttttaatgagattatgtgtgttttttctataatacctttaaccatttattatttcattctatttt 27942177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 3498983 - 3498884
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaaatatgtgtgt--tttctataatacccttaaccatttattatttcattttattttcttctctc 310  Q
    ||||| || |||||| |||||| |||||||| |||||| | | ||| |  ||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  3498983 accaaaaattcaaattaattttgttattttttatgaaattttttgtatcttttctataatacttttaaccatttattatttcattttatttt-ttctctc 3498885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 2910858 - 2910900
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaatt 206  Q
    |||||||||||||||||||||||||||| ||||| ||||||||    
T  2910858 atactccctccgtttcaaaatacatgtctattttaaagaaatt 2910900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 193
Target Start/End: Complemental strand, 38852112 - 38852081
Alignment:
Q  162 tgatactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||||    
T  38852112 tgatactccctccgtttcaaaatacatgtcca 38852081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 8379948 - 8380026
Alignment:
Q  171 ctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaa 249  Q
    |||||||||| ||||| |||| ||||||| |||||| ||   || ||||||||||||||||||| ||||| || |||||    
T  8379948 ctccgtttcacaatacttgtcgattttgaggaaattacatatactaagaaatcaaataaattttgttattgttaatgaa 8380026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 193
Target Start/End: Original strand, 41897986 - 41898016
Alignment:
Q  163 gatactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||||    
T  41897986 gatactccctccgtttcaaaatacatgtcca 41898016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 16778504 - 16778533
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  16778504 atactccctccgtttcaaaatacatgtcca 16778533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 25566547 - 25566576
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  25566547 atactccctccgtttcaaaatacatgtcca 25566576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 28061514 - 28061543
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  28061514 atactccctccgtttcaaaatacatgtcca 28061543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 28061778 - 28061749
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  28061778 atactccctccgtttcaaaatacatgtcca 28061749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 41898251 - 41898222
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  41898251 atactccctccgtttcaaaatacatgtcca 41898222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 47156290 - 47156261
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  47156290 atactccctccgtttcaaaatacatgtcca 47156261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 20885103 - 20885131
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  20885103 tactccctccgtttcaaaatacatgtcca 20885131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 36623308 - 36623336
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  36623308 tactccctccgtttcaaaatacatgtcca 36623336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 36623570 - 36623542
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  36623570 tactccctccgtttcaaaatacatgtcca 36623542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 42877386 - 42877414
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  42877386 tactccctccgtttcaaaatacatgtcca 42877414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 46103370 - 46103398
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  46103370 tactccctccgtttcaaaatacatgtcca 46103398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 46103625 - 46103597
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  46103625 tactccctccgtttcaaaatacatgtcca 46103597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 47156027 - 47156055
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  47156027 tactccctccgtttcaaaatacatgtcca 47156055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 3e-57; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 165 - 302
Target Start/End: Original strand, 25773649 - 25773788
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaata--tgtgtgttt 262  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  25773649 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgatgaaaatatgtgtgtgttt 25773748  T
Q  263 tctataatacccttaaccatttattatttcattttatttt 302  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  25773749 tctataatacccttaatcatttattatttcattttatttt 25773788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 165 - 312
Target Start/End: Complemental strand, 12807130 - 12806981
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgttt 262  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||  ||||||    
T  12807130 tactccctccgtttcaaaatacatgtccattttggagaaattgcattaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 12807031  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  12807030 tctataatacccttaatcatttattatttcattttattttttcctctctc 12806981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 165 - 312
Target Start/End: Complemental strand, 30720769 - 30720620
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgttt 262  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||  ||||||    
T  30720769 tactccctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 30720670  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    | |||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  30720669 tttataatacccttaatcatctattatttcattttatttttttctctctc 30720620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 165 - 312
Target Start/End: Complemental strand, 40886887 - 40886738
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtg--ttt 262  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||  |||    
T  40886887 tactccatccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcgaataaattttgttatttttgatgaaaatatgtgtgtattt 40886788  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  40886787 tctataatacccttaatcatttattatttcattttatttttttctctctc 40886738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 164 - 312
Target Start/End: Complemental strand, 10285335 - 10285185
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgtt 261  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||| |||||||||||  ||||||||||| |||||||||||||||||||||  |||||    
T  10285335 atactccctccgtttcaaaatagatgtctattttggagaaattgcattaaccaagaaactaaataaattttgttatttttgatgaaaatatgtgtgtgtt 10285236  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  10285235 ttctataatacccttaatcatttattatttcattttatttttttctctctc 10285185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 165 - 312
Target Start/End: Complemental strand, 36561376 - 36561227
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgttt 262  Q
    |||||| ||||||||||||||||||||||||||  | |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||  ||||||    
T  36561376 tactccatccgtttcaaaatacatgtccattttagaaaaattgcagtaatcaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgttt 36561277  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  36561276 tctataatacctttaaccatttattatttcattttatttttttctctctc 36561227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 164 - 302
Target Start/End: Complemental strand, 37900902 - 37900762
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgtt 261  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||  |||||||||||  ||||||||||||||  |||||||||||    
T  37900902 atactccctccgtttcaaaatacacatccattttggagaaattgcagtaaccaagaaactaaataaattttgatatttttgatgaaattatatgtgtgtt 37900803  T
Q  262 ttctataatacccttaaccatttattatttcattttatttt 302  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  37900802 ttctataatacccttaaccatttattatttcattctatttt 37900762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 176 - 302
Target Start/End: Complemental strand, 7277688 - 7277560
Alignment:
Q  176 tttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgttttctataatacc 273  Q
    |||||||||||||||| |||||| |||||||| ||||||||| ||| |||||||||||| ||||||||||| |||  || ||||||||||||||||||||    
T  7277688 tttcaaaatacatgtctattttggagaaattggagtaaccaataaaccaaataaattttgttatttttgatcaaattatgtgtgtgttttctataatacc 7277589  T
Q  274 cttaaccatttattatttcattttatttt 302  Q
     ||||||||||||||||||||| ||||||    
T  7277588 tttaaccatttattatttcattatatttt 7277560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 162 - 311
Target Start/End: Original strand, 16983255 - 16983407
Alignment:
Q  162 tgatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataa--attttattatttttgatgaaa--atatgtg 257  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||   |||| || ||||||||||||  |||||||    
T  16983255 tgatactccctctgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataattttttttttttttttgatgaaatgatatgtg 16983354  T
Q  258 tgttttctataatacccttaaccatttattatttcattttattttcttctctct 311  Q
    | ||||||| |||||||||||||| ||||||||| |||||  ||| ||||||||    
T  16983355 ttttttctacaatacccttaacca-ttattattttatttttattttttctctct 16983407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 25683467 - 25683357
Alignment:
Q  203 aattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgt--tttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||| ||| ||||    
T  25683467 aattgcaataaccaagaaaccaaataaattttgttatttttgataaaattatgtgtgtgttttctataatacccttaaccatttattattttattctatt 25683368  T
Q  301 ttcttctctctc 312  Q
    || |||||||||    
T  25683367 tt-ttctctctc 25683357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 300
Target Start/End: Complemental strand, 734611 - 734478
Alignment:
Q  168 tccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtg-ttttcta 266  Q
    ||||||||||||| ||||| ||||||||||||||||||| |    |||||  ||||||||||||||| | ||| ||||||||| | | |||| |||||||    
T  734611 tccctccgtttcacaatacttgtccattttgaagaaattactcataccaaagaatcaaataaattttgtcattattgatgaaattctttgtgtttttcta 734512  T
Q  267 taatacccttaaccatttattatttcattttatt 300  Q
    |||||||||||  |||||||||||||||| ||||    
T  734511 taatacccttactcatttattatttcattctatt 734478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 23098504 - 23098386
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtg--tgtt 261  Q
    ||||||| ||||||||||| |||||||||| |||||||||||| ||       |||||  ||||||||||| ||||||||||||||| ||||||  ||||    
T  23098504 atactccatccgtttcaaa-tacatgtccaatttgaagaaattaca-------agaaactaaataaattttgttatttttgatgaaattatgtgcatgtt 23098413  T
Q  262 ttctataatacccttaaccatttatta 288  Q
    | |||||||||||||||||||||||||    
T  23098412 tcctataatacccttaaccatttatta 23098386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 300
Target Start/End: Original strand, 39070882 - 39071020
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgtt 261  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||| ||   |  ||| |||||||||||| || | |||||||||||||     ||||| ||    
T  39070882 atactccctccgtttcacaatacttgttcattttgaagaaattacacatattaaggaatcaaataaatgttgtcatttttgatgaaatctgttgtgtttt 39070981  T
Q  262 ttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||||||||||||||  |||||||||||||||| ||||    
T  39070982 ttctataatacccttactcatttattatttcattctatt 39071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 15305265 - 15305216
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaac 214  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15305265 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaac 15305216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 300
Target Start/End: Original strand, 16054165 - 16054249
Alignment:
Q  216 aagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||||| ||||||||||| |||||||| |||||| | ||||| |||||||||||| |||| |||||||||||||| ||| ||||    
T  16054165 aagaaatgaaataaattttgttattttttatgaaattttgtgttttttctataatatccttgaccatttattattttattctatt 16054249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 30403191 - 30403101
Alignment:
Q  213 accaagaaatcaaataaattttattatttttgatgaaaatatgtg---tgttttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||||||| |||||||||||| ||||||||||||||| | ||||   | ||||||||||||| ||||| ||||| |||||||||||||||    
T  30403191 accaagaaaccaaataaattttgttatttttgatgaaattctgtgtttttttttctataatactcttaatcatttgttatttcattttatt 30403101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 300
Target Start/End: Original strand, 11319558 - 11319696
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa--atatgtgtgtt 261  Q
    ||||| ||||||||||| ||||  ||||||||||||||||||| ||   || ||  |||||||||||| || | |||||| ||||||   | ||| | ||    
T  11319558 atacttcctccgtttcacaatatttgtccattttgaagaaattacacatactaatgaatcaaataaatgttgtaattttttatgaaattctttgtttttt 11319657  T
Q  262 ttctataatacccttaaccatttattatttcattttatt 300  Q
    ||||||||||||||||  |||||||||||||||| ||||    
T  11319658 ttctataatacccttactcatttattatttcattctatt 11319696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 11796450 - 11796536
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaa 250  Q
    ||||||||||| ||||| | ||| ||||  ||||||||||||| |||  |||||||||| |||| |||||| |||||||||||||||    
T  11796450 atactccctccttttcacactacttgtcatttttgaagaaattacagataccaagaaattaaattaattttgttatttttgatgaaa 11796536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 15304821 - 15304863
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaatt 206  Q
    ||||||||||||||| ||||||||||||||||||  |||||||    
T  15304821 atactccctccgttttaaaatacatgtccattttagagaaatt 15304863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 300
Target Start/End: Complemental strand, 1056507 - 1056422
Alignment:
Q  216 aagaaatcaaataaattttattatttttgatgaaaatatgtgtgtttt-ctataatacccttaaccatttattatttcattttatt 300  Q
    |||||||  |||||||||| |||||||| |||||| | | |||||||| |||||||||  || | |||||||||||||||| ||||    
T  1056507 aagaaattgaataaattttgttatttttaatgaaattctttgtgtttttctataatactattgatcatttattatttcattatatt 1056422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 8086293 - 8086264
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  8086293 atactccctccgtttcaaaatacatgtcca 8086264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 9502626 - 9502655
Alignment:
Q  164 atactccctccgtttcaaaatacatgtcca 193  Q
    ||||||||||||||||||||||||||||||    
T  9502626 atactccctccgtttcaaaatacatgtcca 9502655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 978077 - 978105
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  978077 tactccctccgtttcaaaatacatgtcca 978105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 978339 - 978311
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  978339 tactccctccgtttcaaaatacatgtcca 978311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 14634157 - 14634185
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  14634157 tactccctccgtttcaaaatacatgtcca 14634185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 33387481 - 33387453
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  33387481 tactccctccgtttcaaaatacatgtcca 33387453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 164 - 312
Target Start/End: Complemental strand, 177 - 27
Alignment:
Q  164 atactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgt--gtgtt 261  Q
    |||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||  |||||    
T  177 atactctctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgatgaaaatatgtgtgtgtt 78  T
Q  262 ttctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  77 ttctataatacccttaatcatttattatttcattttatttttttctctctc 27  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 163 - 302
Target Start/End: Original strand, 45452 - 45593
Alignment:
Q  163 gatactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtg--t 260  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||| |||||||||||| ||||||||||||||| ||||||||  |    
T  45452 gatactccctccgtttcaaaatacatgttcattttggagaaattgcaccaaccaagaaaccaaataaattttgttatttttgatgaaattatgtgtgtat 45551  T
Q  261 tttctataatacccttaaccatttattatttcattttatttt 302  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  45552 tttctataatacccttaaccatttattattttattctatttt 45593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 165 - 312
Target Start/End: Original strand, 170 - 311
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtg--tgttt 262  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||||||||        ||||||||| |||||||| |||||||||||||  |||||    
T  170 tactccctccgtttcaaaatacatatccactttggagaaattgcagtaaccaa--------ataaattttgttattttttatgaaaatatgtgtgtgttt 261  T
Q  263 tctataatacccttaaccatttattatttcattttattttcttctctctc 312  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  262 tctataatacccttaaccatttattatttcattttatttttttctctctc 311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 525 - 394
Alignment:
Q  180 aaaatacatgtccattttgaagaaattgcagtaaccaagaaatcaaataaattttattatttttgatgaaaatatgtgtgttttctataatacccttaac 279  Q
    ||||||||||| |||||||  ||||||||||||| ||| |||||||||||||||| ||||||||||| ||| |||||||||||| ||||||||||||||     
T  525 aaaatacatgttcattttggcgaaattgcagtaatcaaaaaatcaaataaattttgttatttttgataaaattatgtgtgttttttataatacccttaat 426  T
Q  280 catttattatttcattttattttcttctctct 311  Q
    |||||||||||||||| ||||||  |||||||    
T  425 catttattatttcattctatttttctctctct 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 70874 - 70961
Alignment:
Q  215 caagaaatcaaataaattttattatttttgatgaaaatatgtgtg--ttttctataatacccttaaccatttattatttcattttatt 300  Q
    |||||||||||||||||||| ||||||||||||||| | ||||||  |||||| ||| ||||||||||||||||||||||||| ||||    
T  70874 caagaaatcaaataaattttgttatttttgatgaaattctgtgtgttttttctgtaacacccttaaccatttattatttcattctatt 70961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 23467 - 23520
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 218  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23467 tactccctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 23520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 23913 - 23872
Alignment:
Q  165 tactccctccgtttcaaaatacatgtccattttgaagaaatt 206  Q
    |||||| ||||||||||||||||||||||||||  |||||||    
T  23913 tactccatccgtttcaaaatacatgtccattttagagaaatt 23872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 65375 - 65301
Alignment:
Q  231 ttttattatttttgatgaaaatatgtgtgtttt---ctataatacccttaaccatttattatttcattttatttt 302  Q
    |||||||||||||||||||| ||| ||||||||   |||||||||||||||||||||||||||||||| ||||||    
T  65375 ttttattatttttgatgaaattatatgtgtttttttctataatacccttaaccatttattatttcattctatttt 65301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 15499 - 15465
Alignment:
Q  261 tttctataatacccttaaccatttattatttcatt 295  Q
    ||||||| |||||||||||||||||||||||||||    
T  15499 tttctattatacccttaaccatttattatttcatt 15465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 100647 - 100675
Alignment:
Q  165 tactccctccgtttcaaaatacatgtcca 193  Q
    |||||||||||||||||||||||||||||    
T  100647 tactccctccgtttcaaaatacatgtcca 100675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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