View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10211_high_21 (Length: 287)
Name: NF10211_high_21
Description: NF10211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10211_high_21 |
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Alignment Details
Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 8511606 - 8511865
Alignment:
| Q |
15 |
atgaattacaatcaattttaattttaagatggtattaaaacttatctaagatctgtttgatcgtttattatcaatcattgatgtccattgtatatgtcca |
114 |
Q |
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| T |
8511606 |
atgaattacaatcaattttaattttaagatggtatcaaaacttatctaagatctgtttgatcgtctattatcaatcattaagatccattgtatatgttca |
8511705 |
T |
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| Q |
115 |
ggactgaacatcagagatgtgtgttaagaattacacgaggtcaacattccatctttcccctcatcaatatgacttccattaataaactcatatatgaggg |
214 |
Q |
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| T |
8511706 |
ggactgaacataagagatgtgtgttaagaattacacgaggtcaacattccatctttcccctcatcaatatgacttccattaataaactcatatatgaggg |
8511805 |
T |
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| Q |
215 |
tcaatggtagaatatgattagtatatgtgatcttaaatttaaagaaatataggttttgtg |
274 |
Q |
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| T |
8511806 |
tcaatggtagaatatgattagtatatgtgatcttaaatttaaagaaatataggttttgtg |
8511865 |
T |
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