View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10211_high_9 (Length: 419)
Name: NF10211_high_9
Description: NF10211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10211_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 191 - 404
Target Start/End: Complemental strand, 7544777 - 7544564
Alignment:
| Q |
191 |
ggtcttaacagtgtgttaggtggggctttatttgttactactgttgtggttggaactgtttctctttgtgttgcagagagggatgttcaagttgatcgac |
290 |
Q |
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| T |
7544777 |
ggtcttaacagtgtgttaggtggggctttgtttgttactactgttgtggttggaactgtttctctttgtgttgcagagagggatgttcaagttgatcgac |
7544678 |
T |
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| Q |
291 |
gatgctttataagggatttgagtttctccctgttcactattttttcgctgcttttgattttgtttgttggcaagattggtattggggcagcgattggttt |
390 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7544677 |
gatgctttataagggatttgagtttcttcctgttcactattttttcgctgcttttgattttgtttgttggcaagattggtattggggcagcgattggttt |
7544578 |
T |
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| Q |
391 |
tgtatcgatttatg |
404 |
Q |
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|||||||||||||| |
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| T |
7544577 |
tgtatcgatttatg |
7544564 |
T |
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