View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10211_low_41 (Length: 263)
Name: NF10211_low_41
Description: NF10211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10211_low_41 |
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Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 11711428 - 11711182
Alignment:
| Q |
1 |
caataactaaataaacaaataaccaatattcatgcaaatatattctactttaatgtttcaatctttcagtggtttggcagataaagggtgaagagcacac |
100 |
Q |
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| T |
11711428 |
caataactaaataaacaaataaccaatattcatgcaaatatattctactttaatgtttcaatctttcagtggtttggcagataaagggtgaagagcacac |
11711329 |
T |
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| Q |
101 |
aattcctaattaatttaaattaacatgagatgaaaagagataaggactatcacttactcacaagtaannnnnnnnnnnnacgcacttgcacatgatctta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
11711328 |
aattcctaattaatttaaattaacatgagatgaaaagagataaggactatcacttactcacaagtaagtgtgtgtgtgtacgcacttgcacatgatctta |
11711229 |
T |
|
| Q |
201 |
aattaataatataagtagctagctccatgcagctgacatgagaagat |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11711228 |
aattaataatataagtagctagctccatgcagctgacatgagaagat |
11711182 |
T |
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