View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10212_2 (Length: 344)
Name: NF10212_2
Description: NF10212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10212_2 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 21 - 344
Target Start/End: Complemental strand, 32863899 - 32863576
Alignment:
| Q |
21 |
tagtagattaaaggtagagacaaactgctttttgttagtataatataatatgccgactaaaacaatatttttcatatgatagaaaatcaatacttgttgg |
120 |
Q |
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| T |
32863899 |
tagtaaattaaaggtagagacaaactgctttttgttagtataatataatatgccgactaaaacaatatttttcatatgatagaaaatcaatacttgttgg |
32863800 |
T |
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| Q |
121 |
ttttgttgcatttgaatgatatttccttttagtaagtccaaattaagccactcatttaaagaaaatcactgttatctaattaggaagcttccctaacctt |
220 |
Q |
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| T |
32863799 |
ttttgttgcatttgaatgatatttccttttagtaagtccgaattaagccactcatttaaagaaaatcactgttatctaattaggaagcttccctaacctt |
32863700 |
T |
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| Q |
221 |
gacctaaagcatttatatacagagaactgtggatgaacccagaaaaagttatgaaaacaaacacaagaattcttagtaatgacacgcatgtatcgcacta |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32863699 |
gacctaaagcatttatatacagagaactgtggatgaacccagaaaaagttatgaaaacaaacacaagaattcttagtaatgacacgcatgtatcgcacta |
32863600 |
T |
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| Q |
321 |
ctttatatggattcatatatctaa |
344 |
Q |
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|||||||||||||||||||||||| |
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| T |
32863599 |
ctttatatggattcatatatctaa |
32863576 |
T |
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