View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10213_high_15 (Length: 246)
Name: NF10213_high_15
Description: NF10213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10213_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 20 - 238
Target Start/End: Complemental strand, 55173000 - 55172782
Alignment:
| Q |
20 |
agggacgcccacaaggctttgctcctttgcagaaaggctattctcggtggtgttcccactgtccaaaagctcaacgactaccacgaggtacatataataa |
119 |
Q |
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| T |
55173000 |
agggacgcccacaaggctttgctcctttgcagaaaggctattctcggtggtgttcccactgtccaaaagctcaacgactaccacgaggtacatataataa |
55172901 |
T |
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| Q |
120 |
tcattgttaagctatatatgcaacatgcgtgtatctccatcatgataactttgagaaatatataatgcatcgtgcaggttagaatctttgagaagcctgg |
219 |
Q |
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| T |
55172900 |
tcattgttaagctatatatgcaacatgcgtgtatctctatcatgataactttgagaaatatataatgcatcgtgcaggttagaatctttgagaagcctgg |
55172801 |
T |
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| Q |
220 |
aacaagcacaggttctgct |
238 |
Q |
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| T |
55172800 |
aacaagcacatgttctgct |
55172782 |
T |
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