View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10213_low_14 (Length: 273)
Name: NF10213_low_14
Description: NF10213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10213_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 43003277 - 43003535
Alignment:
| Q |
1 |
aaggaactagaaaggtaccttggagagtttgttgagagtactgagaatctgaaagtagtatgcttccaagagcatcctcagctccttaacgacaaaat-- |
98 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
43003277 |
aaggaactagaaaggtaccttggagagtttgttgagagtactgagaatctgaaagtagcatgcttccaagagcatcctcagctccttaacgacaaaatat |
43003376 |
T |
|
| Q |
99 |
-tcttgttggcagtggagtagatagccatatttgattcatcaaacagaaaacgttccaatccctctttcattatttgatttataaagaccttccaaattg |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43003377 |
ttcttgttggcagtggagtagatagccatatttgattcatcaaacagaaaacgttccaatccctctttcattatttgatttataaagaccttccaaattg |
43003476 |
T |
|
| Q |
198 |
ttcaatagttcagttctggtctttgatttcagttcacctagaggagtatgtgcctcttg |
256 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43003477 |
ttcaatagttcagtgctggtctttgatttcagttcacctagaggagtatgtgcctcttg |
43003535 |
T |
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