View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10213_low_9 (Length: 375)

Name: NF10213_low_9
Description: NF10213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10213_low_9
NF10213_low_9
[»] chr7 (49 HSPs)
chr7 (163-370)||(11685331-11685538)
chr7 (1-293)||(45464691-45464983)
chr7 (5-139)||(11684075-11684209)
chr7 (163-296)||(34784308-34784441)
chr7 (1-293)||(4321375-4321665)
chr7 (2-292)||(2168358-2168649)
chr7 (178-293)||(34692439-34692554)
chr7 (1-338)||(38614341-38614669)
chr7 (64-293)||(1547241-1547467)
chr7 (12-297)||(3690440-3690725)
chr7 (184-293)||(30108857-30108966)
chr7 (1-293)||(48302444-48302736)
chr7 (12-294)||(36756398-36756681)
chr7 (12-294)||(36762195-36762478)
chr7 (222-293)||(19712014-19712085)
chr7 (163-294)||(36766074-36766205)
chr7 (164-278)||(40785216-40785330)
chr7 (1-154)||(30109024-30109177)
chr7 (1-293)||(23954808-23955099)
chr7 (1-278)||(46994970-46995247)
chr7 (163-297)||(46810995-46811129)
chr7 (183-297)||(7403476-7403590)
chr7 (163-291)||(8421712-8421840)
chr7 (271-370)||(19712098-19712197)
chr7 (178-296)||(13036191-13036309)
chr7 (163-297)||(45360929-45361062)
chr7 (163-291)||(35342722-35342850)
chr7 (163-295)||(37791965-37792097)
chr7 (162-296)||(23904917-23905052)
chr7 (163-293)||(6605032-6605162)
chr7 (163-297)||(13169302-13169435)
chr7 (163-297)||(39857999-39858133)
chr7 (163-293)||(47384608-47384738)
chr7 (49-154)||(48705396-48705499)
chr7 (7-92)||(40785079-40785164)
chr7 (163-235)||(48850929-48851001)
chr7 (241-296)||(12904046-12904101)
chr7 (178-296)||(48311427-48311543)
chr7 (207-297)||(3921007-3921096)
chr7 (106-193)||(12903939-12904026)
chr7 (163-293)||(38549845-38549975)
chr7 (164-296)||(22155495-22155626)
chr7 (164-296)||(22211410-22211541)
chr7 (163-295)||(38472573-38472705)
chr7 (165-296)||(34775362-34775493)
chr7 (76-130)||(8421867-8421921)
chr7 (302-348)||(34784243-34784289)
chr7 (229-285)||(27956933-27956988)
chr7 (260-296)||(48227707-48227743)
[»] chr8 (43 HSPs)
chr8 (163-370)||(11031621-11031828)
chr8 (1-293)||(40019448-40019740)
chr8 (85-296)||(25356622-25356834)
chr8 (163-293)||(10269206-10269336)
chr8 (1-284)||(28432520-28432802)
chr8 (1-297)||(33369050-33369348)
chr8 (7-297)||(461467-461756)
chr8 (7-293)||(33158951-33159236)
chr8 (163-293)||(9186302-9186432)
chr8 (1-296)||(9876067-9876361)
chr8 (1-296)||(38881691-38881989)
chr8 (163-293)||(10268093-10268223)
chr8 (63-293)||(44620244-44620472)
chr8 (12-297)||(1321829-1322115)
chr8 (165-297)||(10770636-10770768)
chr8 (191-296)||(25373335-25373440)
chr8 (216-297)||(25705571-25705652)
chr8 (42-297)||(42895061-42895317)
chr8 (163-293)||(15684048-15684178)
chr8 (190-296)||(25402504-25402610)
chr8 (190-296)||(25707013-25707119)
chr8 (163-268)||(12515395-12515499)
chr8 (178-297)||(11719746-11719865)
chr8 (230-297)||(25370798-25370865)
chr8 (273-370)||(9186447-9186544)
chr8 (163-296)||(17807313-17807446)
chr8 (163-294)||(11790496-11790627)
chr8 (163-297)||(31823142-31823276)
chr8 (163-297)||(32823938-32824072)
chr8 (9-154)||(25371636-25371781)
chr8 (1-278)||(33748644-33748921)
chr8 (178-297)||(24527184-24527303)
chr8 (179-297)||(37525149-37525267)
chr8 (163-297)||(41041032-41041166)
chr8 (163-296)||(13484831-13484964)
chr8 (7-92)||(37525333-37525418)
chr8 (85-197)||(8655640-8655752)
chr8 (163-296)||(41824261-41824394)
chr8 (282-370)||(10267998-10268086)
chr8 (163-291)||(31199781-31199909)
chr8 (163-296)||(22273535-22273668)
chr8 (163-295)||(29693963-29694095)
chr8 (12-59)||(32823816-32823863)
[»] chr3 (39 HSPs)
chr3 (75-295)||(30501391-30501610)
chr3 (89-293)||(40962981-40963184)
chr3 (4-297)||(26448037-26448327)
chr3 (1-295)||(1847168-1847462)
chr3 (63-289)||(49494787-49495011)
chr3 (1-295)||(32842721-32843015)
chr3 (1-293)||(41945608-41945898)
chr3 (1-297)||(48634877-48635173)
chr3 (8-297)||(24382004-24382293)
chr3 (178-293)||(37865676-37865791)
chr3 (16-278)||(31885827-31886088)
chr3 (163-297)||(2975749-2975883)
chr3 (184-293)||(33051144-33051253)
chr3 (4-297)||(35861831-35862124)
chr3 (12-297)||(18429030-18429314)
chr3 (1-121)||(37886239-37886359)
chr3 (1-197)||(23775157-23775353)
chr3 (12-297)||(45255773-45256058)
chr3 (1-195)||(33112233-33112427)
chr3 (12-278)||(33851291-33851555)
chr3 (1-139)||(45897487-45897626)
chr3 (1-125)||(2975887-2976010)
chr3 (163-296)||(2378576-2378709)
chr3 (163-296)||(42282135-42282268)
chr3 (71-278)||(10380511-10380719)
chr3 (163-297)||(610850-610984)
chr3 (163-293)||(51686013-51686143)
chr3 (163-296)||(17516608-17516741)
chr3 (163-296)||(21350257-21350390)
chr3 (163-296)||(30598658-30598791)
chr3 (165-297)||(44268301-44268432)
chr3 (163-297)||(23887489-23887622)
chr3 (163-297)||(27897512-27897646)
chr3 (163-296)||(23875963-23876095)
chr3 (171-296)||(45897342-45897467)
chr3 (302-370)||(30501299-30501367)
chr3 (300-370)||(7589470-7589540)
chr3 (163-297)||(23291889-23292023)
chr3 (302-362)||(40963210-40963270)
[»] chr2 (30 HSPs)
chr2 (1-293)||(11021825-11022117)
chr2 (1-293)||(28247682-28247974)
chr2 (163-293)||(363354-363485)
chr2 (4-293)||(11313127-11313402)
chr2 (1-293)||(38149543-38149836)
chr2 (163-293)||(7744932-7745062)
chr2 (85-295)||(10715400-10715607)
chr2 (163-296)||(17948601-17948734)
chr2 (170-293)||(2359394-2359516)
chr2 (1-297)||(37418271-37418569)
chr2 (15-296)||(42880329-42880610)
chr2 (1-293)||(35575-35867)
chr2 (163-297)||(34400628-34400762)
chr2 (163-297)||(42517877-42518011)
chr2 (163-291)||(15373554-15373683)
chr2 (36-196)||(40150664-40150825)
chr2 (85-297)||(40152135-40152346)
chr2 (164-296)||(17697776-17697903)
chr2 (163-297)||(19907036-19907170)
chr2 (12-130)||(42002990-42003108)
chr2 (163-291)||(41708097-41708225)
chr2 (163-277)||(26581316-26581430)
chr2 (216-297)||(16377082-16377163)
chr2 (282-364)||(363509-363585)
chr2 (241-296)||(4047703-4047758)
chr2 (255-296)||(161813-161854)
chr2 (251-296)||(2359542-2359587)
chr2 (1-34)||(10715644-10715677)
chr2 (163-235)||(14387765-14387837)
chr2 (163-291)||(31474719-31474847)
[»] chr1 (27 HSPs)
chr1 (1-293)||(5784374-5784666)
chr1 (63-293)||(51123115-51123342)
chr1 (1-293)||(11152837-11153128)
chr1 (1-296)||(42558248-42558532)
chr1 (163-280)||(25172701-25172818)
chr1 (12-297)||(45379374-45379658)
chr1 (12-291)||(44158807-44159088)
chr1 (1-297)||(31803204-31803500)
chr1 (12-297)||(42135761-42136045)
chr1 (1-297)||(46637056-46637351)
chr1 (165-297)||(6576774-6576906)
chr1 (12-297)||(35478378-35478660)
chr1 (163-297)||(50554500-50554634)
chr1 (166-297)||(33679549-33679680)
chr1 (163-297)||(31237139-31237273)
chr1 (163-296)||(18058121-18058254)
chr1 (7-130)||(18183063-18183185)
chr1 (163-293)||(15105986-15106116)
chr1 (163-296)||(6817200-6817333)
chr1 (164-246)||(18180818-18180900)
chr1 (163-296)||(45045232-45045365)
chr1 (163-278)||(27952167-27952282)
chr1 (163-297)||(2870712-2870845)
chr1 (163-297)||(3012175-3012309)
chr1 (12-130)||(33679696-33679814)
chr1 (302-370)||(25172876-25172944)
chr1 (255-293)||(33599542-33599580)
[»] chr4 (34 HSPs)
chr4 (1-293)||(39922514-39922806)
chr4 (4-293)||(42879576-42879865)
chr4 (1-293)||(39084659-39084951)
chr4 (1-293)||(39190326-39190618)
chr4 (1-293)||(43778681-43778971)
chr4 (1-293)||(5485559-5485851)
chr4 (1-293)||(44993100-44993392)
chr4 (163-292)||(13438146-13438275)
chr4 (97-282)||(25994708-25994897)
chr4 (163-293)||(230740-230869)
chr4 (2-293)||(32653139-32653430)
chr4 (1-297)||(4519973-4520270)
chr4 (12-278)||(44556917-44557183)
chr4 (164-236)||(39294553-39294625)
chr4 (13-297)||(27626246-27626530)
chr4 (7-296)||(51041027-51041314)
chr4 (183-295)||(28100865-28100977)
chr4 (163-295)||(13449984-13450107)
chr4 (163-297)||(2691684-2691818)
chr4 (163-296)||(20820290-20820423)
chr4 (19-297)||(35997284-35997568)
chr4 (270-346)||(39294645-39294721)
chr4 (163-291)||(47942413-47942541)
chr4 (163-296)||(54387537-54387670)
chr4 (163-278)||(44793243-44793358)
chr4 (163-297)||(11254378-11254512)
chr4 (206-291)||(10544693-10544778)
chr4 (216-297)||(26397635-26397715)
chr4 (163-296)||(49524394-49524527)
chr4 (11-101)||(10544515-10544605)
chr4 (163-297)||(35402069-35402202)
chr4 (270-348)||(230650-230728)
chr4 (259-296)||(42982211-42982248)
chr4 (260-296)||(20494146-20494182)
[»] chr6 (12 HSPs)
chr6 (1-293)||(17950853-17951144)
chr6 (3-293)||(35174674-35174964)
chr6 (1-295)||(17936044-17936339)
chr6 (1-293)||(34344832-34345123)
chr6 (165-293)||(4289710-4289838)
chr6 (171-344)||(31210129-31210313)
chr6 (163-297)||(33277101-33277234)
chr6 (163-296)||(7371453-7371586)
chr6 (171-295)||(30639903-30640027)
chr6 (178-297)||(11356803-11356922)
chr6 (216-293)||(33267342-33267419)
chr6 (207-283)||(14337985-14338061)
[»] chr5 (30 HSPs)
chr5 (163-297)||(1344478-1344612)
chr5 (1-293)||(42619581-42619867)
chr5 (168-370)||(24497749-24497969)
chr5 (1-297)||(38176923-38177219)
chr5 (1-297)||(38204147-38204443)
chr5 (1-297)||(18726853-18727150)
chr5 (1-293)||(35291343-35291630)
chr5 (1-278)||(40330018-40330296)
chr5 (163-295)||(1343482-1343614)
chr5 (63-293)||(27350095-27350322)
chr5 (1-297)||(32089425-32089725)
chr5 (63-297)||(6116465-6116700)
chr5 (1-278)||(32836186-32836462)
chr5 (1-140)||(43317176-43317315)
chr5 (163-297)||(18623765-18623899)
chr5 (1-139)||(18341607-18341745)
chr5 (163-297)||(32134556-32134690)
chr5 (15-278)||(35400226-35400489)
chr5 (163-296)||(34328466-34328600)
chr5 (163-296)||(12738337-12738470)
chr5 (163-296)||(12801160-12801293)
chr5 (163-296)||(27077123-27077256)
chr5 (163-296)||(33257426-33257559)
chr5 (166-284)||(41494167-41494285)
chr5 (216-297)||(30464263-30464344)
chr5 (216-296)||(28035772-28035852)
chr5 (207-297)||(28821770-28821860)
chr5 (259-293)||(29620495-29620529)
chr5 (259-295)||(8541036-8541072)
chr5 (216-296)||(19998149-19998229)
[»] scaffold0006 (1 HSPs)
scaffold0006 (63-291)||(37856-38082)
[»] scaffold0070 (1 HSPs)
scaffold0070 (76-297)||(57669-57890)
[»] scaffold1041 (2 HSPs)
scaffold1041 (230-297)||(2643-2710)
scaffold1041 (230-297)||(2356-2423)
[»] scaffold0722 (1 HSPs)
scaffold0722 (168-297)||(4446-4574)
[»] scaffold0564 (1 HSPs)
scaffold0564 (163-296)||(9533-9666)
[»] scaffold0345 (1 HSPs)
scaffold0345 (178-297)||(1164-1283)


Alignment Details
Target: chr7 (Bit Score: 160; Significance: 3e-85; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 163 - 370
Target Start/End: Original strand, 11685331 - 11685538
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  11685331 attaggttttgaagctttttgaattggtgaagaacgttacctctaattattgaaagaaattttggagattttggagtgtagattacagattgtaaaatta 11685430  T
Q  263 gggttccaattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattag 362  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||    
T  11685431 gggttccaattttatatatttgggggagaaagagcaaagcattttctacaaatcaatcaatttgatccttggaaattttggtcgctatcgaccacattag 11685530  T
Q  363 tctctgct 370  Q
    || |||||    
T  11685531 tccctgct 11685538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 45464691 - 45464983
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||||    
T  45464691 aagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttagattca 45464790  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| | |||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  45464791 atttcaacagtattgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttggggaagaacgtg 45464890  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  |||||||||||||||| |||||  |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  45464891 acccttaattattgaaagaaaatttggagattttggagtgtagattacacattgtaaaattagagttccaattttatatatttgaggaagaaa 45464983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 11684075 - 11684209
Alignment:
Q  5 actctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgctttt-gcccttacacccacccctcatcatttcagattcaaat 103  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  11684075 actctcacatcaccattaaacatggagcttaaagatgaagctcgactttcataattgctttttgcccttacacc-acccctcatcatttcggattcaaat 11684173  T
Q  104 tgaacaattttgcttgaagaaattttggtgattttg 139  Q
    |||||||||||||||||||||||||||| |||||||    
T  11684174 tgaacaattttgcttgaagaaattttggggattttg 11684209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 34784441 - 34784308
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||| | |||||||||  |||||||||||||||||| | ||||||||||||    
T  34784441 attagggtttggagttttttgaattggggaagaacgttaccactaattattgacataaattttggagattttggagtgtagattaaagattgtaaaatta 34784342  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    |||||||||||||||||||||| |||||||||||    
T  34784341 gggttccaattttatatatttggggaagaaagag 34784308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 4321665 - 4321375
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||| ||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| |||||||| |||||||    
T  4321665 aagcactctcacatcaacattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccc-catcattttagattca 4321567  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || || | |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  4321566 atttcaatagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgcaattttttgatttggggaagaacgtg 4321468  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| ||| |  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  4321467 acccttaattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 4321375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 2 - 292
Target Start/End: Original strand, 2168358 - 2168649
Alignment:
Q  2 agcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttg--cccttacacccacccctcatcatttcagattc 99  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||| ||||||||||| |  ||||   ||| ||  |||||||| |||||||| ||||||    
T  2168358 agcactctgacatcaccattaaacttggagcttgaagataaagctcgactttcataactattttttttcccatattcccacccc-catcattttagattc 2168456  T
Q  100 aaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgt 199  Q
    || || || | |||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||||||| |||||||||||| |||||||      
T  2168457 aatttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacgaaaaaattagggtttgaagttttttgaattggagaagaactg 2168556  T
Q  200 taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 292  Q
     || ||| ||||||| | ||||||||||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||| |||||||    
T  2168557 gactacttattattggaggaaattttggtgattttagagtgtagattgcagattgtgtaattagggttacaattttatacaattggggaagaa 2168649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 34692439 - 34692554
Alignment:
Q  178 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 277  Q
    ||||||| |||||||||||||| |||||||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||    
T  34692439 tttttgatttggggaagaacgtgaccactaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttat 34692538  T
Q  278 atatttgaggaagaaa 293  Q
    ||||||| ||||||||    
T  34692539 atatttggggaagaaa 34692554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 38614341 - 38614669
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||| || |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||||||||||||||||    
T  38614341 aagcactctcacatcaccattagacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccacccc-catcatttcagattca 38614439  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || || | |||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||||||| ||||||||| || |||||||       
T  38614440 atttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacgaaaaaattagggtttgaagttttttgaatcggagaagaactgg 38614539  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagcaaa 300  Q
    |||||| ||||||| | ||||||||||  ||||       |||||| || |||||  ||||||| ||||||||||||| |  || |||||||||  ||||    
T  38614540 accacttattattggaggaaattttggtgattt-------tagattgcagattgtgtaattaggattccaattttatacagctggggaagaaag-ccaaa 38614631  T
Q  301 gcattttctacaaatcaattaatttgatccttggaaat 338  Q
     |||||||| ||||||||| |||||  ||||| |||||    
T  38614632 acattttctgcaaatcaatcaatttagtcctttgaaat 38614669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 64 - 293
Target Start/End: Original strand, 1547241 - 1547467
Alignment:
Q  64 tttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnnt 162  Q
    ||||||| |||||||||||| |||||||||  |||||| |  |||| ||||| |||||| |||||||| ||||||   |||||| |||||||            
T  1547241 tttgcccatacacccacccc-catcatttcgtattcaattacaacagttttgtttgaaggaattttggggatttttttatttcgaattcaatcaaaaa-- 1547337  T
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||| | | ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| | ||||||||||||    
T  1547338 attagggtttgaggttatttcaatcggggaagaacgttaccactaattattgaaagaa-ttttgggaattttagagtgtggattaaagattgtaaaatta 1547436  T
Q  263 gggttccaattttatatatttgaggaagaaa 293  Q
    ||||| |||||||||| ||||| ||||||||    
T  1547437 gggtttcaattttatacatttggggaagaaa 1547467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 297
Target Start/End: Complemental strand, 3690725 - 3690440
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 111  Q
    |||||||| ||||| |||||||| ||||| |||||||||||||||||    |||| ||| ||  ||||||||   ||||||||||||||| || || | |    
T  3690725 catcaccactaaacttggagcttgaagatgaagcttgactttcataacaattttttcccatattcccaccccatttcatttcagattcaatttcaatagt 3690626  T
Q  112 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 211  Q
    ||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| ||||||||||||||||||||   |||||| ||||    
T  3690625 tttgcttcaagaaattttgtggattttggctttcagattcaatacgaaaaaattagggtttcaagttttttgaattggggaagaactggaccacttatta 3690526  T
Q  212 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  3690525 ttggaggaaatttaggtgattttagaatgtagattgcaaattgtgtaattagggttccaattttatacaattggggaagacagagc 3690440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 30108966 - 30108857
Alignment:
Q  184 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 283  Q
    |||||||||||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30108966 aattggggaagaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatattt 30108867  T
Q  284 gaggaagaaa 293  Q
    | ||||||||    
T  30108866 ggggaagaaa 30108857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 48302736 - 48302444
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||||||||||||||||||||||||   | ||||| || ||||||||| |||  |  |||||||| ||   |||||||  |||||||  | ||||    
T  48302736 aagcactctcacatcaccattaaacatggaagatgaagatgaaacttgactttgatagctctttttgcccatatgaccacccccaatcatttttgtttca 48302637  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| |||||||||||  |||||||  |||||||  ||||  |||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  48302636 atttcaacagttttgcttgaatgaattttgaagattttggttttcatattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacgtg 48302537  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    ||   ||||||||| ||| || |||||  ||||||||||||||| |||| ||||||||||||| ||| |||||||||||||||| ||||||||    
T  48302536 actcttaattattggaagcaaatttggagattttggagtgtagaatacacattgtaaaattagagtttcaattttatatatttggggaagaaa 48302444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 294
Target Start/End: Original strand, 36756398 - 36756681
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 111  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  36756398 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccccatcattttggattttatttcaatagt 36756497  T
Q  112 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 210  Q
    ||||||| |||||||||||  || ||||  |||  ||||||||        | ||||||||||||| ||||||||||||||||||||   |||||| |||    
T  36756498 tttgcttcaagaaattttgaggaatttggttttatgattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactaaaccacttatt 36756597  T
Q  211 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 294  Q
    |||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||    
T  36756598 attggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagggtttcaattttatacaattggggaagaaag 36756681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 294
Target Start/End: Original strand, 36762195 - 36762478
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 111  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  36762195 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccccatcattttggattttatttcaatagt 36762294  T
Q  112 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 210  Q
    ||||||| |||||||||||  || ||||  |||  ||||||||        | ||||||||||||| ||||||||||||||||||||   |||||| |||    
T  36762295 tttgcttcaagaaattttgaggaatttggttttatgattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactaaaccacttatt 36762394  T
Q  211 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 294  Q
    |||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||    
T  36762395 attggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagggtttcaattttatacaattggggaagaaag 36762478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 19712014 - 19712085
Alignment:
Q  222 ttttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  19712014 ttttggaaattttggagtgtagattacagattgtaaaattagggttccaattttatatatttggggaagaaa 19712085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 294
Target Start/End: Original strand, 36766074 - 36766205
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||| |||||    
T  36766074 attagggtttgaagttttttgaattggggaagaactaaaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtataatta 36766173  T
Q  263 gggttccaattttatatatttgaggaagaaag 294  Q
    ||||| |||||||||| | ||| |||||||||    
T  36766174 gggtttcaattttatacaattggggaagaaag 36766205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 164 - 278
Target Start/End: Original strand, 40785216 - 40785330
Alignment:
Q  164 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 263  Q
    ||||||||||||| ||||||||||||||||||||   |||||| |||| || | ||||||||||  ||||||||||||||||| || |||||| ||||||    
T  40785216 ttagggtttgaagatttttgaattggggaagaactggaccacttattagtggaggaaattttggtgattttggagtgtagattgcagattgtacaattag 40785315  T
Q  264 ggttccaattttata 278  Q
    |||| ||||||||||    
T  40785316 ggttacaattttata 40785330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 30109177 - 30109024
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| |||||||||||| ||| ||  |||||||| ||   ||||| | |||||||| |||||||    
T  30109177 aagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagttctttttgcccatatgaccacctcccatcattttagattca 30109078  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat 154  Q
    | || |||| |||||||||||  |||||||  |||||||| |||| ||||||||    
T  30109077 atttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaat 30109024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 23954808 - 23955099
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||| ||| ||||||||||| |||||||  ||||| ||||| || |||||||| || ||||  || ||  | |||||| | ||||||||||||||    
T  23954808 aagcactctaacaacaccattaaacttggagctcgaagatgaagctcgattttcataactgtttttttccatattctcacccc-cgtcatttcagattca 23954906  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    |  | || | |||||||| |||||||||||  ||||||   |||| ||||||||        |||||||||||||| || ||||||||| |||||||       
T  23954907 atgtcaatagttttgcttcaagaaattttgaggattttagctttcagattcaataccaagaaattagggtttgaagtttgttgaattggcgaagaactgg 23955006  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||||| ||||||| | |||||||| |  ||||| ||||||||| |  | |||||  ||||||||||||||||||||| | ||| ||||||||    
T  23955007 accacttattattggaggaaatttttgttattttagagtgtagactgaagattgtgtaattagggttccaattttatacaattggggaagaaa 23955099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 46995247 - 46994970
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | || |  || ||  |||||||| ||||||||||||||||    
T  46995247 aagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccg-ttatttccatattcccaccccacatcatttcagattca 46995149  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaattggggaagaacgt 199  Q
    | || || | |||||||| |||||||||||  |||| ||  ||||  ||||| |         ||||||||||| || |||||||||||||| |||||      
T  46995148 atttcaatagttttgcttcaagaaattttgaggattctggctttcaaattcactacgaaaaaaattagggtttggagttttttgaattggggcagaactg 46995049  T
Q  200 taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 278  Q
     |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  ||||| |||||||||||||||    
T  46995048 aaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaaggttccaattttata 46994970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 46811129 - 46810995
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || | |||  |||||    
T  46811129 attagggtttgaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagactgtgtaatta 46811030  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    | |||||||||||||| | ||| | ||||||||||    
T  46811029 gagttccaattttatacaattgggaaagaaagagc 46810995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 7403476 - 7403590
Alignment:
Q  183 gaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 282  Q
    ||||||| ||||||||||  ||  ||||| || ||||||| ||||  |||||||| | ||||||||||||||||||| |||||||||||||| ||| |||    
T  7403476 gaattggagaagaacgttgtcatcaattaatggaagaaatcttggagattttggactctagattacatattgtaaaactagggttccaatttaatagatt 7403575  T
Q  283 tgaggaagaaagagc 297  Q
    || | ||||||||||    
T  7403576 tgggaaagaaagagc 7403590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 291
Target Start/End: Complemental strand, 8421840 - 8421712
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  8421840 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 8421741  T
Q  263 gggttccaattttatatatttgaggaaga 291  Q
    ||||| |||||||||||| ||| ||||||    
T  8421740 gggtttcaattttatataattggggaaga 8421712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 370
Target Start/End: Original strand, 19712098 - 19712197
Alignment:
Q  271 attttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgct 370  Q
    |||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||||  ||||| ||| || |||||||| ||  | | |||||||||||||    
T  19712098 attttatatatttggggaagaaagggcaaaacattttcaacaaatcaattaatttagtcctttgaagttatggtcactatcagctaaattagtctctgct 19712197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 296
Target Start/End: Original strand, 13036191 - 13036309
Alignment:
Q  178 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 277  Q
    |||||||||||||||||||| ||  ||  ||||| || ||||||||||||| |||||| | | ||| | ||| ||| |||||| ||| |||||| |||||    
T  13036191 tttttgaattggggaagaactttgtcatcaattaatggaagaaattttggggattttgaactctaggtgacaaattataaaataaggattccaaatttat 13036290  T
Q  278 atatttgaggaagaaagag 296  Q
    ||||||| |||||||||||    
T  13036291 atatttggggaagaaagag 13036309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 297
Target Start/End: Original strand, 45360929 - 45361062
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  |||| ||| ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  45360929 attagggttttaagttttttgaattggggaagaacattgacatcaattcttgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 45361028  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| |||| ||||||| ||||||||||||    
T  45361029 gggttccaaattta-atatttggggaagaaagagc 45361062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 291
Target Start/End: Complemental strand, 35342850 - 35342722
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| ||||||||||||||||||||   || ||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  35342850 attagggttttaagttttttgaattggggaagaactggactacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 35342751  T
Q  263 gggttccaattttatatatttgaggaaga 291  Q
    |||||||||||||||| | ||| ||||||    
T  35342750 gggttccaattttatacaattggggaaga 35342722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 295
Target Start/End: Complemental strand, 37792097 - 37791965
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| || |||  | ||   | |||||||||| || |||||| | | ||| | ||| ||| ||| ||||    
T  37792097 attagggttttaagttttttgaattggggaagaactttgccataagttcagggaagaaatttttgggattttgaactctaggtgacaaattataacatta 37791998  T
Q  263 gggttccaattttatatatttgaggaagaaaga 295  Q
    ||||||||| |||||||||||| ||||||||||    
T  37791997 gggttccaaatttatatatttggggaagaaaga 37791965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 296
Target Start/End: Complemental strand, 23905052 - 23904917
Alignment:
Q  162 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 261  Q
    ||||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| |||    
T  23905052 tattagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctagttgacaaattataacatt 23904953  T
Q  262 agggttccaattttatatattt-gaggaagaaagag 296  Q
    |||||||||| ||||||||||| | |||||||||||    
T  23904952 agggttccaaatttatatatttgggggaagaaagag 23904917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 293
Target Start/End: Original strand, 6605032 - 6605162
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||| ||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  6605032 attagggttttaagttttttgaattggggaaaaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtaacaaattataacatta 6605131  T
Q  263 gggttccaattttatatatttgaggaagaaa 293  Q
    ||||||||| |||||||||||| ||||||||    
T  6605132 gggttccaaatttatatatttggggaagaaa 6605162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 297
Target Start/End: Original strand, 13169302 - 13169435
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  13169302 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 13169401  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||| ||||| |||||||||||| ||||||||||||    
T  13169402 ggg-tccaaatttatatatttggggaagaaagagc 13169435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 39858133 - 39857999
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||| ||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  39858133 attagggttttaagttttttgaattggtgaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 39858034  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||| | |||||||||||| ||||||||||||    
T  39858033 gggttccgaatttatatatttggggaagaaagagc 39857999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 293
Target Start/End: Complemental strand, 47384738 - 47384608
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||| |||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  47384738 attagggttttaagttttttgaattggggaagaactttgacatcaattcatggaagacattttggggattttgaactctaggtgacaaattataacatta 47384639  T
Q  263 gggttccaattttatatatttgaggaagaaa 293  Q
    ||||||||| |||||||| ||| ||||||||    
T  47384638 gggttccaaatttatataattggggaagaaa 47384608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 49 - 154
Target Start/End: Original strand, 48705396 - 48705499
Alignment:
Q  49 actttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcgga 148  Q
    ||||| ||||||  |||||||| ||  ||||||||  |||||||| ||||||| ||||||| ||||||||||||||||| ||| |||| ||  |||||||    
T  48705396 actttgataattctttttgcccatatgcccacccc--atcatttcggattcaatttgaacagttttgcttgaagaaattatggagattctggttttcgga 48705493  T
Q  149 ttcaat 154  Q
    ||||||    
T  48705494 ttcaat 48705499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 40785079 - 40785164
Alignment:
Q  7 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 92  Q
    ||||||||||||||||||| |||||||| ||||  ||||| |||||||||||||| ||||  || ||  |||||||| ||||||||    
T  40785079 tctcacatcaccattaaacttggagcttgaagaagaagctcgactttcataattgtttttttccatattcccaccccccatcattt 40785164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 48851001 - 48850929
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttg 235  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||| || ||||||||||||||||||||    
T  48851001 attagggttttaagttttttgaattggggaagaactttggcatcaattaatggaagaaattttgggaattttg 48850929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 12904046 - 12904101
Alignment:
Q  241 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||  ||||||||||    
T  12904046 tagattacagattgtaaaattagggttcaaattttatagatttggagaagaaagag 12904101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 296
Target Start/End: Original strand, 48311427 - 48311543
Alignment:
Q  178 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 277  Q
    |||||||||||||||||||| ||  ||  ||||| |||||||||||||| | |||||| | | ||| | ||| ||| |||||||| ||||||||   |||    
T  48311427 tttttgaattggggaagaactttgtcatcaattaatgaaagaaattttgaggattttgaattctaggtgacaaattataaaattaaggttccaa--atat 48311524  T
Q  278 atatttgaggaagaaagag 296  Q
    ||||||| |||||||||||    
T  48311525 atatttggggaagaaagag 48311543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 297
Target Start/End: Complemental strand, 3921096 - 3921007
Alignment:
Q  207 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||| || ||||||||||||| |||||| | | ||||||||| |||||| ||||| |||| |||||||||| ||| | ||||||||||||    
T  3921096 aattaatggaagaaattttggggattttgtactatagattacagattgtagaatta-ggtttcaattttatagattcggggaagaaagagc 3921007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 12903939 - 12904026
Alignment:
Q  106 aacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaa 193  Q
    |||||||||||||||||||||||||| || |||| ||||||| ||||||        |||||||||||| | |||| |||||||||||    
T  12903939 aacaattttgcttgaagaaattttggagactttggatttcgggttcaataaaaacaaattagggtttgacgtttttagaattggggaa 12904026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 293
Target Start/End: Complemental strand, 38549975 - 38549845
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||| ||| ||| |||||||||||||||||||| ||   |  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  38549975 attaggattttaagttttttgaattggggaagaactttggtatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacatta 38549876  T
Q  263 gggttccaattttatatatttgaggaagaaa 293  Q
    ||||||||| |||||||||||  ||||||||    
T  38549875 gggttccaaatttatatatttagggaagaaa 38549845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 22155495 - 22155626
Alignment:
Q  164 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 263  Q
    ||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | ||| ||| ||| ||||     
T  22155495 ttagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaagtgacaaattataacattaa 22155594  T
Q  264 ggttccaattttatatatttgaggaagaaagag 296  Q
    |||||||| |||||||||||| |||||||||||    
T  22155595 ggttccaa-tttatatatttggggaagaaagag 22155626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 22211410 - 22211541
Alignment:
Q  164 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 263  Q
    ||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | ||| ||| ||| ||||     
T  22211410 ttagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaagtgacaaattataacattaa 22211509  T
Q  264 ggttccaattttatatatttgaggaagaaagag 296  Q
    |||||||| |||||||||||| |||||||||||    
T  22211510 ggttccaa-tttatatatttggggaagaaagag 22211541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 295
Target Start/End: Complemental strand, 38472705 - 38472573
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||  ||| |||||| | | ||| | ||| ||| ||| ||||    
T  38472705 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaattcgggggattttgaactctaggtgacaaattataacatta 38472606  T
Q  263 gggttccaattttatatatttgaggaagaaaga 295  Q
     |||||||| |||||||||||| |||| |||||    
T  38472605 aggttccaaatttatatatttggggaataaaga 38472573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 296
Target Start/End: Complemental strand, 34775493 - 34775362
Alignment:
Q  165 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 264  Q
    |||||||| ||| ||| |||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||    
T  34775493 tagggttttaagttttctgaattggggaagaacattgacatcaattcatgtaagaaatttgggagattttgaactctaggtaacaaattataacattagg 34775394  T
Q  265 gttccaattttatatatttgaggaagaaagag 296  Q
    ||||||| |||||||||||  |||||||||||    
T  34775393 gttccaaatttatatatttagggaagaaagag 34775362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 8421921 - 8421867
Alignment:
Q  76 cccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttg 130  Q
    |||||||||||||||||||||||||| || ||   |||||||| |||||||||||    
T  8421921 cccacccctcatcatttcagattcaatttcaagcgttttgcttcaagaaattttg 8421867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 34784289 - 34784243
Alignment:
Q  302 cattttctacaaatcaattaatttgatccttggaaattttggtcact 348  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  34784289 cattttctgcaaatcaatcaatttcgtccttggaaattttggtcact 34784243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 27956933 - 27956988
Alignment:
Q  229 aattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 285  Q
    |||||||||||||||||| || |||||  |||||| ||||||| |||||||||||||    
T  27956933 aattttggagtgtagattgcagattgtgtaattagagttccaa-tttatatatttga 27956988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 48227707 - 48227743
Alignment:
Q  260 ttagggttccaattttatatatttgaggaagaaagag 296  Q
    |||||||||||| |||||||||||| |||||||||||    
T  48227707 ttagggttccaaatttatatatttggggaagaaagag 48227743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 7e-71; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 163 - 370
Target Start/End: Complemental strand, 11031828 - 11031621
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| | ||||||||||||    
T  11031828 attagggtttgaagttttttgaattagggaagaacgttaccactaattattggaagaaattttggggattttggagtgtagattatagattgtaaaatta 11031729  T
Q  263 gggttccaattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattag 362  Q
    || ||||||||||||||||||| |||||||| |||||| |||||| | ||||||||| |||||  ||||||||||||||||||||| ||| ||| |||||    
T  11031728 ggcttccaattttatatatttggggaagaaaaagcaaaacattttatgcaaatcaataaatttagtccttggaaattttggtcactatcggccaaattag 11031629  T
Q  363 tctctgct 370  Q
    ||||||||    
T  11031628 tctctgct 11031621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 40019740 - 40019448
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||||    
T  40019740 aagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttagattca 40019641  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  40019640 atttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacgtg 40019541  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| |||||  ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  40019540 acccttaattattggaagaaaatttggagattttggggtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 40019448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 85 - 296
Target Start/End: Complemental strand, 25356834 - 25356622
Alignment:
Q  85 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttg 183  Q
    ||||||||| ||||||| || || | |||||||| |||||||||||| ||||||| ||||| ||||||||        | ||||||||||||| ||||||    
T  25356834 catcatttctgattcaatttcaatagttttgcttcaagaaattttggggattttggatttcagattcaataaaaaagaaattagggtttgaagttttttg 25356735  T
Q  184 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 283  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||  ||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||    
T  25356734 aattggggaagaacgttaccacttattattggaagaaattttggtgattttggagtgtagattacatatagtataattagagttccagttttatatattt 25356635  T
Q  284 gaggaagaaagag 296  Q
    | |||||||||||    
T  25356634 ggggaagaaagag 25356622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 163 - 293
Target Start/End: Original strand, 10269206 - 10269336
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||  | ||||||||||||    
T  10269206 attagcgtttgaagttttttgaattggggaagaacgttaccactaattattggaagaaattttggggattttggtgtgtagattgtagattgtaaaatta 10269305  T
Q  263 gggttccaattttatatatttgaggaagaaa 293  Q
    || ||||||||||||||||||| | ||||||    
T  10269306 ggcttccaattttatatatttgggaaagaaa 10269336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 28432802 - 28432520
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| || |||||||||  ||  |  |||||||| ||   ||||||| |||||||| |||||||    
T  28432802 aagcactctcacatcaccattaaacatggaggatgaagatgaaacttgactttggtagctctttttgcccatatgaccacccc-catcattttagattca 28432704  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || ||||  ||||||||||  |||||||  |||||||  |||| ||||||||        | || |||||| |  ||||||| ||||||||||||||     
T  28432703 atttcaacagatttgcttgaatgaattttgtagattttggttttcagattcaattaaaaaaaaatacggtttgcaattttttgatttggggaagaacgtg 28432604  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 284  Q
    |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28432603 acccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttg 28432520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 33369348 - 33369050
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||| |||||||||||||||||||  |||||||| |||||||||||  ||||||||||  | |||| | | ||  |||||  | ||||||||||||||||    
T  33369348 aagcgctctcacatcaccattaaatttggagcttgaagataaagctcaactttcataaccgttttttctcatattcccacgtcccatcatttcagattca 33369249  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta--ttagggtttgaagctttttgaattggggaagaacg 198  Q
    | || || | |||||||| ||||| ||||||  ||||||  |||| ||||||||        |  || |||||||||| ||||||||||||||||||||     
T  33369248 atttcaatagttttgcttcaagaagttttgggaattttggctttcagattcaataagaaaaaaaattcgggtttgaagttttttgaattggggaagaact 33369149  T
Q  199 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
      |||||| ||||||| ||||| ||||||  ||||||||||||||||| || ||| |  ||||||||||||||||||||||||||| ||||||||||||    
T  33369148 ggaccacttattattggaagaagttttggtgattttggagtgtagattgcagattatgtaattagggttccaattttatatatttggggaagaaagagc 33369050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 7 - 297
Target Start/End: Complemental strand, 461756 - 461467
Alignment:
Q  7 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 106  Q
    ||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || || | ||| ||  ||||| || ||||||||||||||||| || |    
T  461756 tctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgtttcttcccatattcccacaccccatcatttcagattcaatttca 461657  T
Q  107 acaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 206  Q
    | | ||||| || || ||||||||  |||||||| |||| ||||||||         ||||||||||||| ||||||||||||||||||||   ||||||    
T  461656 atagttttgtttcaa-aaattttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttttgaattggggaagaactggaccact 461558  T
Q  207 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
     ||||  | | ||||||||||  |||||||||||||||||  | |||||  |||||||||| |||||||||| | ||||||||||||||||    
T  461557 tattacaggaggaaattttggtgattttggagtgtagattggagattgtgtaattagggttacaattttatacaattgaggaagaaagagc 461467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 7 - 293
Target Start/End: Complemental strand, 33159236 - 33158951
Alignment:
Q  7 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 106  Q
    ||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||| || | |  ||||||||  |||||||||||||||| || |    
T  33159236 tctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgctttttccat-attcccaccccctatcatttcagattcaatttca 33159138  T
Q  107 acaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 206  Q
    | | |||||||| || ||| ||||  |||||||| |||| ||||||||         ||||||||||||| ||||||||||||||||||||   ||||||    
T  33159137 atagttttgcttcaaaaaaatttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttttgaattggggaagaaccgaaccact 33159038  T
Q  207 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
     |||| || | ||||||||||  ||||||||||||||||| || |||||  |||||||||| |||||||||| | ||| ||||||||    
T  33159037 tattactggaggaaattttggtgattttggagtgtagattgcagattgtgtaattagggttacaattttatacaattggggaagaaa 33158951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 163 - 293
Target Start/End: Original strand, 9186302 - 9186432
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| ||||||||||||| |||||||||| |||||||||||| |||||||||  || |||||||||||||||||||| ||||||||||||    
T  9186302 attagggtttaaagttttttgaattgggtaagaacgttatcactaattattggaagaaatttatgggattttggagtgtagattacagattgtaaaatta 9186401  T
Q  263 gggttccaattttatatatttgaggaagaaa 293  Q
    ||||| |||||||| ||||||| ||||||||    
T  9186402 gggtttcaattttaaatatttggggaagaaa 9186432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 9876067 - 9876361
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||| |||||||  |||||||||| |||||| | ||||| |||||||||||||||||  | |||| ||| ||  |||||||| ||||||||||||||||    
T  9876067 aagcattctcacaataccattaaacttggagcctgaagatgaagcttgactttcataacagttttttcccatattcccacccc-catcatttcagattca 9876165  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || || | |||||||| || ||||||||  |||||||  |||| |||||| |        |||||||||||||| |||||||||||||| |||||       
T  9876166 atttcaatagttttgcttcaaaaaattttgaggattttggctttcagattcactacgaaaaaattagggtttgaagttttttgaattggggcagaactgg 9876265  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 296  Q
    |||||| ||||||| | |||||||| |  ||| | ||||||||||| || |||||| |||||||||| |||||||||| | ||| |||||||||||    
T  9876266 accacttattattggaggaaatttttgtgattatagagtgtagattgcagattgtataattagggtttcaattttatacaattggggaagaaagag 9876361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 38881989 - 38881691
Alignment:
Q  1 aagcactctca--catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacc-cctcatcatttcagat 97  Q
    |||||||||||  ||||||| |||||| |||||||| ||||| ||||| |||||||||||||| |||| ||| ||  | |||| || |||||||||||||    
T  38881989 aagcactctcatacatcaccgttaaacttggagcttgaagatgaagctcgactttcataattgttttttcccatattctcacctccccatcatttcagat 38881890  T
Q  98 tcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaac 197  Q
    |||| || || | |||||||| |||||||||||  |||||||  |||  || | |          |||||||||| ||| ||||||||||||||||||||    
T  38881889 tcaatttcaatagttttgcttcaagaaattttgaggattttggcttttagaataagaaaaaaaaaattagggtttcaagttttttgaattggggaagaac 38881790  T
Q  198 gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 296  Q
       |||||| ||||||| ||||||||| ||   |||||||||||| ||| ||||||||  ||||| ||||||||||||||||||||| |||||||||||    
T  38881789 tggaccacttattattggaagaaatttgggtggttttggagtgtacattgcatattgtgtaattaaggttccaattttatatatttggggaagaaagag 38881691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 293
Target Start/End: Complemental strand, 10268223 - 10268093
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||| | |||  |||||||||||| ||||| ||||||||||| ||||||||| ||| |||||||||||||||||| | |||| |||||||    
T  10268223 attagggtttgaagttatttacattggggaagaatgttactactaattattggaagaaatttgggggattttggagtgtagattatagattgaaaaatta 10268124  T
Q  263 gggttccaattttatatatttgaggaagaaa 293  Q
    ||||||||||| |||||||||| ||||||||    
T  10268123 gggttccaattctatatatttggggaagaaa 10268093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 63 - 293
Target Start/End: Original strand, 44620244 - 44620472
Alignment:
Q  63 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 161  Q
    |||||||  |||||||||||| ||||||||||||||||| |  |||| ||||| |||||| |||||||| ||||||   |||| | |||||||           
T  44620244 ttttgccgatacacccacccc-catcatttcagattcaattacaacagttttgtttgaaggaattttggagatttttttattttgaattcaatcaaaaaa 44620342  T
Q  162 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 261  Q
     |||||||||||| | | ||| ||||||| |||||| |||||||||||||||| ||||| ||||| |||||||||||||| ||||| | |||||||||||    
T  44620343 -attagggtttgaggttatttcaattggg-aagaacattaccactaattattggaagaatttttgtgaattttggagtgtggattaaagattgtaaaatt 44620440  T
Q  262 agggttccaattttatatatttgaggaagaaa 293  Q
    |||||| |||||||||| ||||| ||||||||    
T  44620441 agggtttcaattttatacatttggggaagaaa 44620472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 297
Target Start/End: Original strand, 1321829 - 1322115
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 111  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  1321829 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccatattcccaccccccttcatttcagattcaatttcaatagt 1321928  T
Q  112 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 210  Q
    ||||||| |||||||||||  |||||||  ||||  |||||||        | ||||||||| ||| ||||||||||||||||||||   |||||| |||    
T  1321929 tttgcttcaagaaattttgtggattttggctttcatattcaatacgaaaaaaattagggtttcaagttttttgaattggggaagaactgaaccacttatt 1322028  T
Q  211 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    |||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  1322029 attggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttccaattttatacaattggggaagacagagc 1322115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 165 - 297
Target Start/End: Complemental strand, 10770768 - 10770636
Alignment:
Q  165 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 264  Q
    |||||||||||| |||| |||||| |||| ||||||  || |||||| | |||||||||||||| |||||||||||  ||||||| ||||||||||||||    
T  10770768 tagggtttgaagtttttagaattgaggaaaaacgttgtcattaattaattaaagaaattttggggattttggagtgcggattacagattgtaaaattagg 10770669  T
Q  265 gttccaattttatatatttgaggaagaaagagc 297  Q
    | |||||||||||| ||||| ||||||||||||    
T  10770668 gctccaattttatagatttggggaagaaagagc 10770636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 191 - 296
Target Start/End: Original strand, 25373335 - 25373440
Alignment:
Q  191 gaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaag 290  Q
    |||||| ||||| ||| ||||||| ||||||||||||  ||||||||||||||||||||||| | | ||| ||||||||||||| |||||||||||||||    
T  25373335 gaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacatatagcacaatcagggttccaatttcatatatttgaggaag 25373434  T
Q  291 aaagag 296  Q
    ||||||    
T  25373435 aaagag 25373440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 25705652 - 25705571
Alignment:
Q  216 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  25705652 aagaaattttggtgattttggagtgtagattacatatagtataattagggttccaattttatatatttggggaagaaagagc 25705571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 297
Target Start/End: Complemental strand, 42895317 - 42895061
Alignment:
Q  42 aagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaa 141  Q
    ||||| ||||||||| | || |||| ||| ||  |||||||| ||||||||||||||||| || || | |||||||| |||||||||||  |||||||      
T  42895317 aagctcgactttcatgactgttttttcccatattcccaccccccatcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattttggc 42895218  T
Q  142 tttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtg 240  Q
    ||||  |||||||        | ||||||||||||| ||||||||||||||||||||   |||| | || |||| |||| |||||||  ||||| |||||    
T  42895217 tttcaaattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactggaccatttataattggaagatattttggtgattttagagtg 42895118  T
Q  241 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    || ||| || |||||  ||||||||||||||| ||||| | ||| ||||||||||||    
T  42895117 taaattgcagattgtgtaattagggttccaatgttatacaattggggaagaaagagc 42895061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 163 - 293
Target Start/End: Complemental strand, 15684178 - 15684048
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||| ||||||  |||| ||||||||||||||||||  ||  ||||| || |||||||||| ||||||||| | | ||||||||| |||||||||||     
T  15684178 attaggttttgaaatttttagaattggggaagaacgttgtcatcaattaatggaagaaatttttggaattttgaactctagattacagattgtaaaattg 15684079  T
Q  263 gggttccaattttatatatttgaggaagaaa 293  Q
    |||||||||||||||| ||||| ||||||||    
T  15684078 gggttccaattttatagatttggggaagaaa 15684048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 190 - 296
Target Start/End: Original strand, 25402504 - 25402610
Alignment:
Q  190 ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaa 289  Q
    ||||||| ||||| ||| ||||||| ||||||||||||  |||||||||||||||||||| || ||| ||| |||||| |||||||||||||||| ||||    
T  25402504 ggaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacagatagtacaatcagggtttcaattttatatatttggggaa 25402603  T
Q  290 gaaagag 296  Q
    |||||||    
T  25402604 gaaagag 25402610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 190 - 296
Target Start/End: Original strand, 25707013 - 25707119
Alignment:
Q  190 ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaa 289  Q
    ||||||| ||||| ||| ||||||| ||||||||||||  |||||||||||||||||||| || ||| ||| |||||| |||||||||||||||| ||||    
T  25707013 ggaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacagatagtacaatcagggtttcaattttatatatttggggaa 25707112  T
Q  290 gaaagag 296  Q
    |||||||    
T  25707113 gaaagag 25707119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 163 - 268
Target Start/End: Complemental strand, 12515499 - 12515395
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||| ||||||||| |||||||||||||| | |||||||  ||| ||||||||||| |||||||||||||||||| | ||||||||||||    
T  12515499 attagggtttgaagttttttgaatcggggaagaacgttatcgctaattagggaa-gaaattttggggattttggagtgtagattaaagattgtaaaatta 12515401  T
Q  263 gggttc 268  Q
     |||||    
T  12515400 cggttc 12515395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 297
Target Start/End: Complemental strand, 11719865 - 11719746
Alignment:
Q  178 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 277  Q
    |||||||||||||||||||||||  ||  ||||| || ||||||||||||| |||||||| | ||| | | | ||||||||||| |||||||||||||||    
T  11719865 tttttgaattggggaagaacgttgtcatcaattaatggaagaaattttggggattttggactctaggtgataaattgtaaaattggggttccaattttat 11719766  T
Q  278 atatttgaggaagaaagagc 297  Q
    | ||||| ||||||||||||    
T  11719765 agatttggggaagaaagagc 11719746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 25370865 - 25370798
Alignment:
Q  230 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  25370865 attttggagtgtagattacatatagtataattagggttccaattttatatatttggggaagaaagagc 25370798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 273 - 370
Target Start/End: Original strand, 9186447 - 9186544
Alignment:
Q  273 tttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgct 370  Q
    |||||||||||| ||||||||||||||  |||||||| ||||||||| |||||  || |||||||||||||||||| ||| ||| |||||||||||||    
T  9186447 tttatatatttggggaagaaagagcaagtcattttctgcaaatcaatcaatttagtcattggaaattttggtcactatcggccaaattagtctctgct 9186544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 17807446 - 17807313
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||| ||||||| ||||||||||||||||||| |||  ||  ||||| || ||||| ||||||| |||||| | | ||| | ||| ||| ||||||||    
T  17807446 attaggttttgaagttttttgaattggggaagaatgttgtcatcaattaatggaagaatttttggggattttgaactctaggtgacaaattataaaatta 17807347  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||| |||||||||||| |||||||||||    
T  17807346 gggttccaaatttatatatttgtggaagaaagag 17807313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 294
Target Start/End: Original strand, 11790496 - 11790627
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||| ||||||| |||| ||||| |||||||| |||  ||  ||||| || ||||||||||||| |||||||| | ||||| ||| |||||||||| |    
T  11790496 attaggttttgaagtttttagaatttgggaagaaggttgtcatcaattaatggaagaaattttggggattttggactatagataacaaattgtaaaatca 11790595  T
Q  263 gggttccaattttatatatttgaggaagaaag 294  Q
     ||||||| ||||||| |||||||||||||||    
T  11790596 aggttccatttttatagatttgaggaagaaag 11790627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 163 - 297
Target Start/End: Original strand, 31823142 - 31823276
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||| |||||||||||||| |||||   |||||||||||||  | ||||||||    ||| | ||||||||||| || |||||  |||||    
T  31823142 attagggtttgaagttttttgaattggggcagaactgaaccactaattatttgaggaaattttcatgattatagagtgtagattgcagattgtgtaatta 31823241  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    |||||||||||||||| | ||| ||||||||||||    
T  31823242 gggttccaattttatacaattggggaagaaagagc 31823276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 163 - 297
Target Start/End: Original strand, 32823938 - 32824072
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||| |||||||||||||||| |||   |||||| ||||||| | ||||||| ||  |||||  |||||||||| || |||||  |||||    
T  32823938 attagggtttgaagttttttgaattggggaaaaactgaaccacttattattggaggaaatttaggcgattttatagtgtagattgcagattgtgtaatta 32824037  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    |||||||||||||| | | ||| ||||||||||||    
T  32824038 gggttccaattttaaacaattggggaagaaagagc 32824072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 25371636 - 25371781
Alignment:
Q  9 tcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaac 108  Q
    ||||||||||||||||| |||||||| ||||| ||||| ||| ||||||| || |||| ||| ||  |||||||||||||||||| ||||||| || ||     
T  25371636 tcacatcaccattaaacttggagcttgaagatgaagctcgacattcataactgttttttcccatatgcccacccctcatcatttcggattcaatttcaat 25371735  T
Q  109 aattttgcttgaagaaattttggtgattttgaatttcggattcaat 154  Q
    | |||||||  || |||||||   ||||||| ||||| ||||||||    
T  25371736 agttttgctgcaataaattttttggattttggatttcagattcaat 25371781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 33748921 - 33748644
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||||||| ||| ||||||| |||||||| ||||| || ||||||||||||||  | |||| || | |  |||||||| ||||||||||||||||    
T  33748921 aagcactctcacaacactattaaacttggagcttgaagatgaaacttgactttcataaccgttttttccat-attcccaccccacatcatttcagattca 33748823  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgt 199  Q
    | || || | |||||||| |||||||||||   ||| ||  ||||  ||||| |        | ||||||||||||  |||||||||||||| |||||      
T  33748822 atttcaatagttttgcttcaagaaattttgagtattctggctttcaaattcactacgaaaaaaattagggtttgaatttttttgaattggggcagaactg 33748723  T
Q  200 taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 278  Q
     |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  ||||| |||||||||||||||    
T  33748722 aaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaaggttccaattttata 33748644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 178 - 297
Target Start/End: Complemental strand, 24527303 - 24527184
Alignment:
Q  178 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 277  Q
    ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||    
T  24527303 tttttgaattggggaagaactggaccacttattattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttccaattttat 24527204  T
Q  278 atatttgaggaagaaagagc 297  Q
    | | ||| |||||| |||||    
T  24527203 acaattggggaagatagagc 24527184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 297
Target Start/End: Complemental strand, 37525267 - 37525149
Alignment:
Q  179 ttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 278  Q
    |||||||||||||||||||   |||||| |||| || | ||||||||||  |||||||||||||||||  | |||||  |||||||||| ||||||||||    
T  37525267 ttttgaattggggaagaactgaaccacttattagtggaggaaattttggtgattttggagtgtagattgaagattgtgcaattagggttacaattttata 37525168  T
Q  279 tatttgaggaagaaagagc 297  Q
     | ||| |||| |||||||    
T  37525167 caattggggaataaagagc 37525149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 41041166 - 41041032
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| | |||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  41041166 attagggttttaagttatttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 41041067  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| |||||||||||| ||||||||||||    
T  41041066 gggttccaaatttatatatttggggaagaaagagc 41041032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 13484964 - 13484831
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  13484964 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 13484865  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
     |||||||| |||||||||||| |||||||||||    
T  13484864 aggttccaaatttatatatttggggaagaaagag 13484831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 37525418 - 37525333
Alignment:
Q  7 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 92  Q
    ||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||||||||    
T  37525418 tctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccaccccccatcattt 37525333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 8655640 - 8655752
Alignment:
Q  85 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttga 184  Q
    ||||||||||||||||| || || | |||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| |||||||    
T  8655640 catcatttcagattcaatttcaatagttttgcttcaagaaattttgtggattttggctttcagattcaatacgaaaaaattagggtttcaagttttttga 8655739  T
Q  185 attggggaagaac 197  Q
    |||||||||||||    
T  8655740 attggggaagaac 8655752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 41824394 - 41824261
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||  | ||| ||| ||| ||||    
T  41824394 attagggttttaagttttttgaattggggaagaactttgacatcaattcatggaagaaattttggggattttgaactctacgtgacaaattataacatta 41824295  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||| ||| | |||||||||| |||||||||||    
T  41824294 gggtttcaaatatatatatttggggaagaaagag 41824261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 370
Target Start/End: Complemental strand, 10268086 - 10267998
Alignment:
Q  282 ttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgct 370  Q
    ||||||||||||||||||| |||||||   |||||||| |||||  || ||||||||| |||||||| ||  ||| |||||||||||||    
T  10268086 ttgaggaagaaagagcaaaacattttcagtaaatcaatcaatttagtcattggaaattatggtcactatcagccaaattagtctctgct 10267998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 291
Target Start/End: Complemental strand, 31199909 - 31199781
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| || |||||||| ||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  31199909 attagggttttaagtttgttgaattgaggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 31199810  T
Q  263 gggttccaattttatatatttgaggaaga 291  Q
    |||||||||||||||| | ||| ||||||    
T  31199809 gggttccaattttatacaattggggaaga 31199781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 22273535 - 22273668
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||| ||| ||| || ||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||    
T  22273535 attaggattttaagtttcttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtgacaaattataacatta 22273634  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||| |||||||||||| |||||||||||    
T  22273635 gggttccaaatttatatatttggggaagaaagag 22273668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 29693963 - 29694095
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| ||||| |||||| ||||||| ||  ||  ||||  || ||||||| ||| | |||||| | | ||| | ||| ||| ||| ||||    
T  29693963 attagggttttaagttttttaaattggagaagaactttgtcatcaattcatggaagaaatcttgcggattttgaactctaggtgacaaattataacatta 29694062  T
Q  263 gggttccaattttatatatttgaggaagaaaga 295  Q
    ||||||||| |||||||||||| ||||||||||    
T  29694063 gggttccaaatttatatatttggggaagaaaga 29694095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 32823816 - 32823863
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataat 59  Q
    |||||||||||||| || ||||| ||||||||||| ||||||||||||    
T  32823816 catcaccattaaacttgaagcttgaagataaagctcgactttcataat 32823863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 1e-63; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 75 - 295
Target Start/End: Complemental strand, 30501610 - 30501391
Alignment:
Q  75 acccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttga 174  Q
    ||||||||  ||||||||||||||||| ||||||| ||||||||||||||||||| | || | ||| |||||||||||||        || ||||||||     
T  30501610 acccacccaccatcatttcagattcaatttgaacagttttgcttgaagaaattttagggaatctgattttcggattcaataaaaaaaaat-agggtttgg 30501512  T
Q  175 agctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattt 274  Q
     | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  30501511 ggttttttgaattggggaagtacgttaccactaattattgaaagaaattttgggaattttggagtgtagattaaagattgtaaaattagggttccaattt 30501412  T
Q  275 tatatatttgaggaagaaaga 295  Q
    |||||||| ||||||||||||    
T  30501411 tatatattggaggaagaaaga 30501391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 89 - 293
Target Start/End: Original strand, 40962981 - 40963184
Alignment:
Q  89 atttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattg 188  Q
    ||||||||||||| ||||||||||||||||||||||||||||  |||| ||   ||||||||||||        |||||||||||||  |||||||||||    
T  40962981 atttcagattcaatttgaacaattttgcttgaagaaattttgtggattctggtattcggattcaataaaaaaa-attagggtttgaatttttttgaattg 40963079  T
Q  189 gggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgagga 288  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||    
T  40963080 gggaagaacgttaccactaattattgtaagaaattttgggaattttggagtgtagattaaagattgtaaaattagggttccaattttatatatttgggga 40963179  T
Q  289 agaaa 293  Q
    |||||    
T  40963180 agaaa 40963184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 4 - 297
Target Start/End: Complemental strand, 26448327 - 26448037
Alignment:
Q  4 cactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaat 103  Q
    ||||||||||||||||||||| ||||||||| ||| | |||||||||||| |||| |  || ||||| ||  ||||||| |||||||||||||||||| |    
T  26448327 cactctcacatcaccattaaagatggagcttgaaggtgaagcttgactttgataactctttgtgcccatatgcccaccc-tcatcatttcagattcaatt 26448229  T
Q  104 tgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttacc 203  Q
    |||||| |||||||||||||||||||||  ||| ||  |||  ||||||||        |||||||||||||| ||||||||||| | ||| ||||||||    
T  26448228 tgaacagttttgcttgaagaaattttgggtattctggtttttagattcaataaaaaaa-attagggtttgaagttttttgaattgagaaaggacgttacc 26448130  T
Q  204 actaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||||| |||||||||| ||  ||||||||| ||||| | |||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  26448129 actaattattggaagaaattttaggg-ttttggagtatagataaaatattgtaaaattaaggttccaattttatatatttgaggatgaaagagc 26448037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 1847168 - 1847462
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||| |||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||||||||||||||||    
T  1847168 aagctctctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccaccccccatcatttcagattca 1847267  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    |  | || | |||||||| |||||||||||  |||||||  ||||  |||||||        ||||||||||| || ||||| ||||||||||||||       
T  1847268 atatcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgtagttttttaaattggggaagaactga 1847367  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 295  Q
    |||| |  |||||| | ||||||||||  |||||| ||||||||||||| |||||  ||||||||||||||||||||| ||||| ||||||||||    
T  1847368 accattttttattggatgaaattttggtgattttgaagtgtagattacaaattgtgtaattagggttccaattttatacatttggggaagaaaga 1847462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 63 - 289
Target Start/End: Complemental strand, 49495011 - 49494787
Alignment:
Q  63 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 161  Q
    |||||||| |||||||||||| ||||||||||||||||| |  |||| ||||| |||||| |||||| | ||||||   ||||||||||||||           
T  49495011 ttttgcccatacacccacccc-catcatttcagattcaattataacagttttgtttgaaggaattttcgggatttttttatttcggattcaatcaaaaa- 49494914  T
Q  162 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 261  Q
     |||||||||||| | | ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||    
T  49494913 -attagggtttgaggttatttgaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatt 49494815  T
Q  262 agggttccaattttatatatttgaggaa 289  Q
    ||||||||||||||||| ||||| ||||    
T  49494814 agggttccaattttatacatttggggaa 49494787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 32843015 - 32842721
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||| ||| |||||||||||||||||  || || ||||| ||||| |||||| | || |  | |||||| ||| |||||| | |||||||||  |||||    
T  32843015 aagcattctgacatcaccattaaacataaagtttgaagatgaagctcgactttgagaacttgtgttgcccatacgcccaccacccatcatttcgcattca 32842916  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    |  ||||||||||||||||||    |||||| ||||||| ||||| ||||||||        |||||||||||||| |||| ||| |  |||||||||||    
T  32842915 atctgaacaattttgcttgaattttttttggggattttggatttcagattcaatcaaaacaaattagggtttgaagtttttagaagtaaggaagaacgtt 32842816  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 295  Q
      || |||||| || |||||||||||||||||||||| ||||||||| | |||| ||||||||||||||||||||||| ||||||||||||||||    
T  32842815 gtcattaattaatggaagaaattttgggaattttggattgtagattagagattgaaaaattagggttccaattttatagatttgaggaagaaaga 32842721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 41945608 - 41945898
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| | |||||| |||||||    
T  41945608 aagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccaccccccttcattttagattca 41945707  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| ||||||||||| || |||||  |||||||  |||| ||||||||        |||||| |||| |  ||||||| ||||||||||||||     
T  41945708 atttcaacagttttgcttgaataa-ttttgcagattttggttttcagattcaattaaaaaa-attaggatttgcaattttttgatttggggaagaacgtg 41945805  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| ||| |  |||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  41945806 acccttaattattggaagaaaatttagagattttggagtgtagattacacatcgtaaaattagggttccaattttatatatttggggaagaaa 41945898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 48634877 - 48635173
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| || ||||  || ||  |||||||| ||||||||||||||||    
T  48634877 aagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactgtttttttccatattcccaccccccatcatttcagattca 48634976  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || || | |||||||| |||||||||||  |||||||| ||||  |||||||        |||||||||||||| ||||||||||||||||||||       
T  48634977 atttcaatagttttgctttaagaaattttgaggattttgactttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaactgg 48635076  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    |||| | || |||| | || ||||| |  ||||| ||||||| |||  | |||||  ||||||||||||||| ||||| | ||| ||||||||||||    
T  48635077 accatttataattggaggatattttagtgattttagagtgtaaattgtagattgtgtaattagggttccaatgttatacaattggggaagaaagagc 48635173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 8 - 297
Target Start/End: Complemental strand, 24382293 - 24382004
Alignment:
Q  8 ctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaa 107  Q
    ||||||||||||||| || |||||||| ||||| ||| |  ||||||||||  | ||||  || ||  |||||||| ||||||||||||||||| || ||    
T  24382293 ctcacatcaccattatacttggagcttcaagatgaagttaaactttcataacagtttttttccatattcccaccccccatcatttcagattcaatttcaa 24382194  T
Q  108 caattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccacta 207  Q
     | |||||||| || |||| |||  |||||||| |||| ||||||||        |||||||||||||| ||||| ||||||||||||||   | ||||     
T  24382193 tagttttgcttcaaaaaatcttgaggattttgactttcagattcaatgcgaaaaaattagggtttgaagattttttaattggggaagaactggatcactt 24382094  T
Q  208 attattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    |||| |||| ||||||||||  |||||||||||||||||  | |||||  |||||||||| ||| |||||| | ||| ||||||||||||    
T  24382093 attactgaaggaaattttggtgattttggagtgtagattgaagattgtgtaattagggttacaactttatacaattggggaagaaagagc 24382004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 37865791 - 37865676
Alignment:
Q  178 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 277  Q
    ||||||| |||||||||||||| |||  ||||||||  |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  37865791 tttttgatttggggaagaacgtgacccttaattattagaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttat 37865692  T
Q  278 atatttgaggaagaaa 293  Q
    ||||||| ||||||||    
T  37865691 atatttggggaagaaa 37865676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 278
Target Start/End: Complemental strand, 31886088 - 31885827
Alignment:
Q  16 accattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttg 115  Q
    |||||||||| |||| ||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| | |||||| |||||||| || || | | |||    
T  31886088 accattaaacttggatcttgaagatgaagctcgactttcataactgttttttcccatattcccacccc-cgtcattttagattcaatttcaatagtcttg 31885990  T
Q  116 cttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattattga 215  Q
    ||| |||||||||||  |||||||  ||||  |||||||        |||||||||||||| ||||| ||||||||||||||   |||||| |||||||     
T  31885989 cttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttcaattggggaagaactgaaccacttattattgg 31885890  T
Q  216 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 278  Q
    | ||||||||||  ||||| ||||||||||| || |||||  |||||| ||||||||||||||    
T  31885889 aggaaattttggtgattttagagtgtagattgcagattgtgtaattagagttccaattttata 31885827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 2975883 - 2975749
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||| ||||||||||||||||||||   ||| || ||||||| ||||||||||||  ||||||||||||||| |  | |||||  |||||    
T  2975883 attagggtttgaagttttttgaattggggaagaactggaccgcttattattggaagaaattttggtgattttggagtgtagaatgaagattgtgtaatta 2975784  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
      |||||||||||||||||||| ||||||||||||    
T  2975783 aagttccaattttatatatttggggaagaaagagc 2975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 33051144 - 33051253
Alignment:
Q  184 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 283  Q
    ||||||||||||| ||||||||||||||||| ||||  |||||| ||||||||||||| ||||| |||||||| ||||| |||||| |||||||| ||||    
T  33051144 aattggggaagaatgttaccactaattattggaagattttttggaaattttggagtgtggattaaatattgtataattatggttcctattttatacattt 33051243  T
Q  284 gaggaagaaa 293  Q
    | ||||||||    
T  33051244 ggggaagaaa 33051253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 297
Target Start/End: Complemental strand, 35862124 - 35861831
Alignment:
Q  4 cactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaat 103  Q
    |||||||||||||||||||||||| |||||| ||||| ||  |  ||||| ||||||| |||||||| |||  ||||| | |||||||||||||||||      
T  35862124 cactctcacatcaccattaaacatagagcttgaagatgaaaatcaactttgataattgtttttgcccatacgtccaccacccatcatttcagattcaacc 35862025  T
Q  104 tgaacaattttgcttgaagaaattttggtgat-tttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttac 202  Q
    ||||||      ||||||| |||||||| ||| |||||||||||||||||||        | |||| || |||| ||||| || |||||||||| |||      
T  35862024 tgaacaccaaaacttgaaggaattttggggatctttgaatttcggattcaataaaaaaa-aataggtttagaag-ttttttaaatggggaagaatgttgt 35861927  T
Q  203 cactaattattgaaaga-aattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||  |||||  | |||| | ||||||| |||||||| | ||||||||| ||| || |||||||||| |||||||||| ||||| ||||||||||||    
T  35861926 catcaattaaaggaagatatttttggggattttggactatagattacaaattttataattagggtttcaattttatagatttggggaagaaagagc 35861831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 297
Target Start/End: Complemental strand, 18429314 - 18429030
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 111  Q
    ||||||| |||||| |||||||| ||||| ||||| |||||||||||    |||| ||||||  | ||||||   |||||||| |||||| || || | |    
T  18429314 catcaccgttaaacttggagcttgaagatgaagctcgactttcataacaattttttcccttattctcaccccgt-tcatttcaaattcaatttcaatagt 18429216  T
Q  112 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 211  Q
    ||||||| |||||||||||  |||||||| |||| ||||||||        ||| |||||| ||| ||||||||||||||||||||   |||||| ||||    
T  18429215 tttgcttcaagaaattttgtagattttgactttcagattcaatacaaaaaaattcgggtttcaagttttttgaattggggaagaactggaccacttatta 18429116  T
Q  212 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||  | ||||||| ||  ||||| || | |||||| || |||||  |||||||||| |||||||||| | ||| |||||| |||||    
T  18429115 ttagaggaaatttaggtgattttagaatatagattgcagattgtgtaattagggtttcaattttatacaattggggaagacagagc 18429030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 37886359 - 37886239
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   |||||||||||||||| |||||||    
T  37886359 aagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccctcatcattttagattca 37886260  T
Q  101 aattgaacaattttgcttgaa 121  Q
    | || |||| |||||||||||    
T  37886259 atttcaacagttttgcttgaa 37886239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 23775157 - 23775353
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||||||| ||||||| ||| | |||||  ||||| ||||| ||||||||||| || |||| ||| ||  |||| ||| ||||||||||||||||    
T  23775157 aagcactctcacaacaccattgaacttagagctcgaagatgaagctcgactttcataactgttttttcccatattcccatcccccatcatttcagattca 23775256  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaac 197  Q
    | || || | |||||||| |||||||||||  |||||||  ||||  ||| |||        |||||||||||||| |||||||| |||||||||||    
T  23775257 atttcaatagttttgcttcaagaaattttgaggattttggctttcaaattaaatacgaaaaaattagggtttgaagttttttgaagtggggaagaac 23775353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 297
Target Start/End: Complemental strand, 45256058 - 45255773
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataat--tgcttttgcccttacacccacccctcatcatttcagattcaaattgaaca 109  Q
    |||||||||||||| |||||||| || || ||||| |||||||||||   |  |||| ||| ||  | |||||| | ||||||||||||||| || || |    
T  45256058 catcaccattaaacttggagcttgaaaatgaagctcgactttcataacaattttttttcccatattctcacccc-cttcatttcagattcaatttcaata 45255960  T
Q  110 attttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaat 209  Q
     ||||| || |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| ||||||||||||||||||||   |||||| ||    
T  45255959 gttttgtttcaagaaattttgtggattttggctttcagattcaatacgaaaa-attagggtttcaagttttttgaattggggaagaactggaccacttat 45255861  T
Q  210 tattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||| ||||||||| | ||| |||||| |||||    
T  45255860 tattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttcaaattttatacaattggggaagacagagc 45255773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 33112427 - 33112233
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacaccca-cccctcatcatttcagattc 99  Q
    ||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| || |||| ||| ||  |||| |||| ||||||||||||| |    
T  33112427 aagcactctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgttttttcccatattcccacccccccatcatttcagatcc 33112328  T
Q  100 aaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 195  Q
    || || || | |||||||| ||||||||||   ||||||||  |||  |||||||         ||||||||||||| ||||||||||||||||||    
T  33112327 aatttcaatagttttgcttcaagaaattttaaggattttgacattcaaattcaatgcaaaaa-gttagggtttgaagttttttgaattggggaaga 33112233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 278
Target Start/End: Complemental strand, 33851555 - 33851291
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 111  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| |||  |  || ||||| | ||||||||||||||| || || | |    
T  33851555 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccagattcc-accccccttcatttcagattcaatttcaatagt 33851457  T
Q  112 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 211  Q
    ||| ||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||  ||||||||||||||||||||   |||||| ||||    
T  33851456 ttttcttcaagaaattttgtggattttggctttcagattcaatacaaaaaaattagggtttcaaattttttgaattggggaagaactggaccacttatta 33851357  T
Q  212 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 278  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||| |||||||||||||||    
T  33851356 ttggaggaaatttaggtgattttagaatgtagattgcagattgtgtaatta-ggttccaattttata 33851291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 45897626 - 45897487
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattg-cttttgcccttacacccacccctcatcatttcagattc 99  Q
    ||||||||||||| ||||||||||| |||||||| ||||| |||||||||||| ||||  |  |||| ||| ||  |||||||| |||||||||| ||||    
T  45897626 aagcactctcacaacaccattaaacttggagcttgaagatgaagcttgacttttataaccgtttttttcccatattcccaccccacatcatttcatattc 45897527  T
Q  100 aaattgaacaattttgcttgaagaaattttggtgattttg 139  Q
    || || || | |||||||| |||||||||||  |||||||    
T  45897526 aatttcaatagttttgcttcaagaaattttgaggattttg 45897487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 2976010 - 2975887
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||| ||||||||||||||||||| |||| ||| ||||| ||||| |||||| |||| || |||| ||| ||  ||||||||| |||||||||||||||    
T  2976010 aagcaatctcacatcaccattaaacttggaacttgaagatgaagctcgactttgataactg-tttttcccatattcccaccccttatcatttcagattca 2975912  T
Q  101 aattgaacaattttgcttgaagaaa 125  Q
    | || || | |||||||| ||||||    
T  2975911 atttcaatagttttgcttcaagaaa 2975887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 2378576 - 2378709
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||| ||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  2378576 attagggttttaagttttttgaattagggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataatatta 2378675  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||| |||||||||||| |||||||||||    
T  2378676 gggttccaaatttatatatttggggaagaaagag 2378709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 42282135 - 42282268
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||  | ||| ||| ||| ||||    
T  42282135 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttggggattttgaattctatgtgacaaattataacatta 42282234  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||| |||||||||||  |||||||||||    
T  42282235 gggttccaaatttatatatttagggaagaaagag 42282268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 278
Target Start/End: Original strand, 10380511 - 10380719
Alignment:
Q  71 ttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttaggg 169  Q
    ||||||||||||| ||| |||| |||||||| || || | |||||||| |||||||||||  |||||||  ||||  |||||||        | ||||||    
T  10380511 ttacacccaccccccatgattttagattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatatgaaaaaaattaggg 10380610  T
Q  170 tttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcc 269  Q
    ||||||| ||||||||||||||||||||   |||| | || |||| | || |||||||  |||||  |||||| |||||| |||||  |||||||||| |    
T  10380611 tttgaagatttttgaattggggaagaactggaccatttataattggaggatattttggagattttaaagtgtaaattacagattgtgtaattagggtttc 10380710  T
Q  270 aattttata 278  Q
    ||| |||||    
T  10380711 aatgttata 10380719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 297
Target Start/End: Original strand, 610850 - 610984
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  |||||||||||||||| ||| || | | | | | ||| ||| ||| ||||    
T  610850 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgaaagaaattttggggattgtgaactcttggtgacaaattataacatta 610949  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
     ||||||||  ||||||||||| ||||||||||||    
T  610950 aggttccaaaattatatatttggggaagaaagagc 610984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 293
Target Start/End: Original strand, 51686013 - 51686143
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  51686013 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacatta 51686112  T
Q  263 gggttccaattttatatatttgaggaagaaa 293  Q
    |||||  || |||||||||||| ||||||||    
T  51686113 gggttagaaatttatatatttggggaagaaa 51686143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 17516608 - 17516741
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||| ||||||||| ||  ||  ||||  || ||||||||| | | |||||| | | ||| ||||| ||| ||| ||||    
T  17516608 attagggttttaagttttttgaattagggaagaacattgacatcaattcatggaagaaatttggaggattttgaactctaggttacaaattataacatta 17516707  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    | ||||||| |||||||||||| |||||||||||    
T  17516708 gagttccaaatttatatatttggggaagaaagag 17516741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 21350257 - 21350390
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| ||||||||||||||||| || ||  ||  ||||  || ||||||||| ||| |||||  | | ||| | ||| ||| ||| ||||    
T  21350257 attagggttttaagttttttgaattggggaagtacattgacatcaattcatggaagaaatttgggggattttaaactctaggtgacaaattataacatta 21350356  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||| |||||||||||| |||||||||||    
T  21350357 gggttccaaatttatatatttggggaagaaagag 21350390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 30598791 - 30598658
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||    
T  30598791 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtgacaaattataacatta 30598692  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||| |||||||||||| || ||||||||    
T  30598691 gggttccaaatttatatatttggggtagaaagag 30598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 297
Target Start/End: Complemental strand, 44268432 - 44268301
Alignment:
Q  165 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 264  Q
    |||||||| ||| ||||||||||||| |||||| ||  || |||||  || ||||||||| ||| |||||| | | | | | ||| ||| ||| ||||||    
T  44268432 tagggttt-aagttttttgaattgggaaagaacattgacattaattcatggaagaaatttgggggattttgaactctgggtgacaaattataacattagg 44268334  T
Q  265 gttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||| |||||||||||| ||||||||||||    
T  44268333 gttccaaatttatatatttggggaagaaagagc 44268301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 23887622 - 23887489
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||  |||||||||||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  |||||    
T  23887622 attagggtttgaaattttttgaattggggcagaactcaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaatta 23887523  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    || || |||||||||| | ||| ||||||||||||    
T  23887522 ggatttcaattttatacaattg-ggaagaaagagc 23887489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 27897646 - 27897512
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||| ||||| ||| ||||| |||||||||||||| ||  ||  ||||  || |||||||||  || |||||| | | ||| | ||| ||| ||| ||||    
T  27897646 attatggttttaagtttttttaattggggaagaacattgacatcaattcatgtaagaaatttgagggattttgaactctaggtaacaaattataacatta 27897547  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| |||||||||||| ||||||||||||    
T  27897546 gggttccaaatttatatatttggggaagaaagagc 27897512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 23876095 - 23875963
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||| ||||||| |||||||||||||||||||  ||  ||  ||||| || ||||||||||| |||||||| | | || || ||| ||  |||||| |    
T  23876095 attaggttttgaagttttttgaattggggaagaagattgtcatcaattaatggaagaaattttgagaattttgaactcta-atgacaaatgataaaataa 23875997  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||||||| || ||||  |||||||||||    
T  23875996 gggttccaattttgtagattttgggaagaaagag 23875963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 296
Target Start/End: Complemental strand, 45897467 - 45897342
Alignment:
Q  171 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 270  Q
    |||||| |||||||||||| | |||||   | |||| ||||||| | ||||||||    ||| | ||||||||||| ||||||||  ||||||||||| |    
T  45897467 ttgaagttttttgaattggagcagaactgaagcacttattattggaggaaattttcatgattatagagtgtagattgcatattgtgtaattagggttcta 45897368  T
Q  271 attttatatatttgaggaagaaagag 296  Q
    |||||||| | ||| |||||||||||    
T  45897367 attttatacaattggggaagaaagag 45897342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 370
Target Start/End: Complemental strand, 30501367 - 30501299
Alignment:
Q  302 cattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgct 370  Q
    |||||||| ||||||||| |||||  ||||||||||||||||||||| ||  ||| |||||||| ||||    
T  30501367 cattttctgcaaatcaatcaatttcgtccttggaaattttggtcactatcagccaaattagtctttgct 30501299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 370
Target Start/End: Complemental strand, 7589540 - 7589470
Alignment:
Q  300 agcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgct 370  Q
    |||||||||| ||||||||| |||||  || |||||||||||| ||| | ||||||| ||||||| |||||    
T  7589540 agcattttctgcaaatcaatcaattttgtcattggaaattttgatcattatcgaccaaattagtccctgct 7589470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 23292023 - 23291889
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| |||  ||||||||||||||||||| ||  |  |||||  || ||||||||| ||  |||||| | | ||||| ||  ||| ||| ||||    
T  23292023 attagggttttaagtcttttgaattggggaagaacattgacgttaattcatggaagaaatttgggagattttgaactctagatgacgaattataacatta 23291924  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| |||||||||||   |||||||||||    
T  23291923 gggttccaaatttatatatttatagaagaaagagc 23291889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 362
Target Start/End: Original strand, 40963210 - 40963270
Alignment:
Q  302 cattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattag 362  Q
    |||||||| ||||||||| ||||| ||| |||||||||||||| ||| ||| ||| |||||    
T  40963210 cattttctgcaaatcaatcaatttcatctttggaaattttggttactatcggccaaattag 40963270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 3e-61; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 11022117 - 11021825
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||| || ||   |||||||||||||||| |||||||    
T  11022117 aagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgtccatatgaccacccctcatcattttagattca 11022018  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| |||||||||||  |||||||  |||||||| |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  11022017 atttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacgtg 11021918  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  11021917 acccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 11021825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 28247682 - 28247974
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||||    
T  28247682 aagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttagattca 28247781  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  28247782 atttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacgtg 28247881  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  28247882 acccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 28247974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 163 - 293
Target Start/End: Original strand, 363354 - 363485
Alignment:
Q  163 attagggtttgaagctttt-tgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 261  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||    
T  363354 attagggtttgaagtttttttgaattggagaagaacgttaccactaattattggaagaaattttgaggattttggagtgtagattacatattgtaaaatt 363453  T
Q  262 agggttccaattttatatatttgaggaagaaa 293  Q
    ||||||||||||||||||||||| ||||||||    
T  363454 agggttccaattttatatatttggggaagaaa 363485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 293
Target Start/End: Complemental strand, 11313402 - 11313127
Alignment:
Q  4 cactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaat 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| || | |  |||||||| ||  |||||||| ||||| ||   |||||| |    
T  11313402 cactctcacatcaccattaaacatggagcttgaagataaagcttgactttgatgactctttttgcccatatgcccacccc-catcagtttctattcaatt 11313304  T
Q  104 tgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttacc 203  Q
    |||||| |||||||||||||||||||||  ||| |   |||||||||||||        || |||||||| || ||||| ||||||||||||||||||||    
T  11313303 tgaacagttttgcttgaagaaattttgggaattctagttttcggattcaataaaaaaaaatgagggtttggagtttttttaattggggaagaacgttacc 11313204  T
Q  204 actaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||             |||| |||| ||||||||||||| |||| | |||||||||||||||||| ||||||||||||||| ||||||||    
T  11313203 act-------------aattgtggggattttggagtgtacattaaagattgtaaaattagggttctaattttatatatttggggaagaaa 11313127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 38149543 - 38149836
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||| |||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||||    
T  38149543 aagcattctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttagattca 38149642  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntatt-agggtttgaagctttttgaattggggaagaacgt 199  Q
    | || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        | | ||| |||| |  ||||||| |||||||| |||||    
T  38149643 atttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaaatcaggatttgcaattttttgatttggggaataacgt 38149742  T
Q  200 taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
     |||  ||||||||| |||||| |||||  ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||    
T  38149743 gacccttaattattggaagaaaatttggagattttagagtgtagattacacattgtaaaattagggttccaattttatatatttgggaaagaaa 38149836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 163 - 293
Target Start/End: Original strand, 7744932 - 7745062
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| | ||||||||||||    
T  7744932 attagggtttgaggttatttcaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaaagattgtaaaatta 7745031  T
Q  263 gggttccaattttatatatttgaggaagaaa 293  Q
    ||||| |||||||||| ||||| | ||||||    
T  7745032 gggtttcaattttatacatttgggaaagaaa 7745062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 85 - 295
Target Start/End: Complemental strand, 10715607 - 10715400
Alignment:
Q  85 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttga 184  Q
    |||||||||  |||||| ||||||| ||||||||||||||||||||| |||| |   ||| |||||||||        |||||||||||||| |||||||    
T  10715607 catcatttcgaattcaatttgaacagttttgcttgaagaaattttggggattctagtttttggattcaataaaaaa--attagggtttgaagttttttga 10715510  T
Q  185 attggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 284  Q
    |||||| || ||||||||  |||||||| | ||| |||||||||||||||  || |||||||| | ||||||||||||||||||||||||||||||||||    
T  10715509 attggg-aacaacgttactgctaattatcggaaggaattttgggaattttttagggtagattaaagattgtaaaattagggttccaattttatatatttg 10715411  T
Q  285 aggaagaaaga 295  Q
     |||| |||||    
T  10715410 gggaaaaaaga 10715400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 17948601 - 17948734
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||| | | ||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||||| | ||||||||||||    
T  17948601 attagggtttgaggttatttcaattggggaagaacgttaccaccaattattggaagaatttttgggaattttggagtgtggattaaagattgtaaaatta 17948700  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||| |||||||||| ||||| | |||||||||    
T  17948701 gggtttcaattttatacatttgggaaagaaagag 17948734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 170 - 293
Target Start/End: Complemental strand, 2359516 - 2359394
Alignment:
Q  170 tttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcc 269  Q
    ||||||| |||| ||||||||||||||||||  ||  ||||| ||| ||||||||||||| ||||||| | ||||| ||| ||||||||||||||||| |    
T  2359516 tttgaagtttttagaattggggaagaacgttgtcatcaattaatgatagaaattttggga-ttttggactctagatgacaaattgtaaaattagggtttc 2359418  T
Q  270 aattttatatatttgaggaagaaa 293  Q
    ||||||||| ||||| ||||||||    
T  2359417 aattttatagatttggggaagaaa 2359394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 37418271 - 37418569
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgc-ccttacacccacccctcatcatttcagattc 99  Q
    ||||||||||||| ||||||||||| || ||||  ||||| || || ||||||||||| || ||||   || ||  |||||||| |||||||||||||||    
T  37418271 aagcactctcacaacaccattaaacttgaagctcgaagatgaaactcgactttcataactgttttttttccatattcccaccccccatcatttcagattc 37418370  T
Q  100 aaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacg 198  Q
    || || || | |||||||| |||||| ||||  |||||||  ||||  |||||||        | ||||||||||||| |||||||||||| |||||||     
T  37418371 aatttcaatagttttgcttcaagaaactttgaggattttggctttcaaattcaatacgaaaaaaattagggtttgaagttttttgaattggcgaagaact 37418470  T
Q  199 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
      |||| | || |||| | || |||||||  ||||| ||||||| ||| || |||||  ||||||||||||||| ||||| | ||| ||||||||||||    
T  37418471 ggaccatttataattggaggatattttggtgattttagagtgtaaattgcagattgtgtaattagggttccaatgttatacaattggggaagaaagagc 37418569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 296
Target Start/End: Original strand, 42880329 - 42880610
Alignment:
Q  15 caccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaatttt 114  Q
    ||||||||||| | ||||| |||||| ||||| ||||||||||| || |||| ||| ||  |||| ||| ||| ||||| ||||||| || || | ||||    
T  42880329 caccattaaacttagagctcaaagatgaagctcgactttcataactgttttttcccatattcccaacccccatgatttctgattcaatttcaatagtttt 42880428  T
Q  115 gcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattattg 214  Q
    |||| |||||||||||  |||||||  ||||  ||| |||        |||||||||||||| ||||| ||||||||||||||   |||| | || ||||    
T  42880429 gcttcaagaaattttgaggattttggctttcaaatttaatacgaaaaaattagggtttgaagttttttaaattggggaagaactggaccatttataattg 42880528  T
Q  215 aaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 296  Q
     | || |||||||  ||||| ||||||| ||| || |||||  |||||||||| |||| ||||| | ||| |||||||||||    
T  42880529 gaggatattttggtgattttagagtgtaaattgcagattgtgtaattagggtttcaatgttatacaattggggaagaaagag 42880610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 35867 - 35575
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||||||| ||||||||||| |||||||| ||||| || ||| ||||||||||  | |||| || | |  ||||| || ||||||||||||||||    
T  35867 aagcactctcacaacaccattaaacttggagcttgaagatgaaacttaactttcataaccgttttttccat-attcccactccacatcatttcagattca 35769  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgt 199  Q
    | || || | |||||||| |||||||||||  |||| ||  |||| |||||| |        | ||||||||||||| |||||||||||||| |||||      
T  35768 atttcaatagttttgcttcaagaaattttgaggattctggctttcagattcactacgaaaaaaattagggtttgaagttttttgaattggggcagaactg 35669  T
Q  200 taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
     |||||| ||||||| | ||||||||    ||| | ||||||| ||| || |||||  ||||| ||||| ||||||||| | ||| ||||||||    
T  35668 aaccacttattattggaggaaattttcatgattatagagtgtatattgcagattgtgtaattaaggttcgaattttatacaattggggaagaaa 35575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 34400762 - 34400628
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | | | | ||| ||| ||| ||||    
T  34400762 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctgggtgacaaattataacatta 34400663  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| |||||||||||| ||||||||||||    
T  34400662 gggttccaaatttatatatttggggaagaaagagc 34400628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 42518011 - 42517877
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||||| || ||| |||||| | | ||| | ||| ||| ||| ||||    
T  42518011 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaaattgggggattttgaactctaggtgacaaattataacatta 42517912  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| |||||||||||| ||||||||||||    
T  42517911 gggttccaaatttatatatttggggaagaaagagc 42517877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 15373554 - 15373683
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgt-taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 261  Q
    |||||||||| ||| |||||||||||||||||||| |  |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  ||||    
T  15373554 attagggttttaagttttttgaattggggaagaacttggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatt 15373653  T
Q  262 agggttccaattttatatatttgaggaaga 291  Q
    ||||||||||||||||| | ||| ||||||    
T  15373654 agggttccaattttatacaattggggaaga 15373683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 196
Target Start/End: Complemental strand, 40150825 - 40150664
Alignment:
Q  36 aagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttg-cttgaagaaattttggtga 134  Q
    ||||| || ||||||||| | ||||| |||||||| |||  ||||| | |||||||| ||||||||  ||||||||||||  ||||||||||||||  ||    
T  40150825 aagatgaaacttgactttgagaattgtttttgcccatacggccaccacccatcattttagattcaatctgaacaattttgatttgaagaaattttgaaga 40150726  T
Q  135 ttttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaa 196  Q
    ||||| |||| |||||||||        | |||||||||||| |||| |||| |||||||||    
T  40150725 ttttggattttggattcaatgaaaacaaaatagggtttgaagtttttagaataggggaagaa 40150664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 297
Target Start/End: Original strand, 40152135 - 40152346
Alignment:
Q  85 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttga 184  Q
    ||||||||  |||||||  |||||||||||| |||||||||||||   ||||||| ||||||||||||||        |||||||||| ||| |||| ||    
T  40152135 catcattttggattcaatctgaacaattttggttgaagaaattttcaggattttggatttcggattcaatcaaatcaaattagggttttaagtttttaga 40152234  T
Q  185 attggggaagaa--cgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 282  Q
    ||||||||||||   |||     |||||| || |||||||| |||  ||||||||  |||||| | | |||| |||||| ||||| |||||||||| |||    
T  40152235 attggggaagaaatggtt---gttaattaatggaagaaattgtggagattttggaccgtagatgagagattgaaaaatttgggtttcaattttatagatt 40152331  T
Q  283 tgaggaagaaagagc 297  Q
    || | ||||||||||    
T  40152332 tgggaaagaaagagc 40152346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 17697776 - 17697903
Alignment:
Q  164 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 263  Q
    ||||||||| ||| ||||||||||||||||||||    |||  | |||| ||| ||||||||||| |||||| | | ||| | ||| ||| ||| |||||    
T  17697776 ttagggttttaagttttttgaattggggaagaac----ccatcatttatggaa-gaaattttggggattttgaactctaggtgacaaattataacattag 17697870  T
Q  264 ggttccaattttatatatttgaggaagaaagag 296  Q
    |||||||| |||||||||||| |||||||||||    
T  17697871 ggttccaaatttatatatttggggaagaaagag 17697903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 19907170 - 19907036
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||| ||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  19907170 attagggttttaagttttttgaattggtgaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 19907071  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||| | |||||||||||| ||||||||||||    
T  19907070 gggttccgaatttatatatttggggaagaaagagc 19907036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 42002990 - 42003108
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 111  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  ||||||||  |||||||||||||  | || || | |    
T  42002990 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccctatcatttcagattttatttcaatagt 42003089  T
Q  112 tttgcttgaagaaattttg 130  Q
    ||||||| |||||||||||    
T  42003090 tttgcttcaagaaattttg 42003108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 41708097 - 41708225
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| ||||||||||| ||||||||   |||||| ||||| | | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  41708097 attagggttttaagttttttgaattgaggaagaactggaccacttattatgggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 41708196  T
Q  263 gggttccaattttatatatttgaggaaga 291  Q
    |||||||||||||||| | ||| ||||||    
T  41708197 gggttccaattttatacaattggggaaga 41708225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 277
Target Start/End: Complemental strand, 26581430 - 26581316
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||| ||||||| |||||||||||||||| | ||||  ||  ||||| || |||||||||||||||||||| | | ||| | ||| ||| ||||||||    
T  26581430 attaggttttgaagttttttgaattggggaacagcgttgtcatcaattaatggaagaaattttgggaattttgaactctaggtgacaaattataaaatta 26581331  T
Q  263 gggttccaattttat 277  Q
    || ||| ||| ||||    
T  26581330 ggattctaatcttat 26581316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 16377163 - 16377082
Alignment:
Q  216 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| | | |||||| | ||||| | ||| ||| ||| ||||||||||||| |||||||||||| ||||||||||||    
T  16377163 aagaaatttagaggattttgaactgtaggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagc 16377082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 364
Target Start/End: Original strand, 363509 - 363585
Alignment:
Q  282 ttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtc 364  Q
    ||||||||||||||||||| |||||||| ||||||||||       |||||| |||||||||||||| ||| ||| |||||||    
T  363509 ttgaggaagaaagagcaaaacattttctgcaaatcaatt------gtccttgaaaattttggtcactatcggccaaattagtc 363585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 4047703 - 4047758
Alignment:
Q  241 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 296  Q
    ||||| ||| ||| ||||||||||||| |||||||||| ||||| |||||||||||    
T  4047703 tagatgacaaattataaaattagggtttcaattttatagatttggggaagaaagag 4047758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 161813 - 161854
Alignment:
Q  255 taaaattagggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||||||||||| ||| |||||||| |||||||||||    
T  161813 taaaattagggttccaaatttttatatttggggaagaaagag 161854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 2359542 - 2359587
Alignment:
Q  251 attgtaaaattagggttccaattttatatatttgaggaagaaagag 296  Q
    ||||| |||||||||||||||||| ||| ||||| |||||||||||    
T  2359542 attgtcaaattagggttccaatttaatagatttggggaagaaagag 2359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10715677 - 10715644
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagctt 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  10715677 aagcactctcacagcaccattaaacatggagctt 10715644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 14387837 - 14387765
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttg 235  Q
    |||||||||  ||| |||||||||||||||||||  ||  ||  |||||||| ||||||||||||| ||||||    
T  14387837 attagggttctaagttttttgaattggggaagaaaattgacatcaattattggaagaaattttggggattttg 14387765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 31474719 - 31474847
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| | | ||||||||||||| |||| | ||  ||||||||  || ||||||| ||| | |||||| | |  || | ||| ||| ||| ||||    
T  31474719 attagggttttaggttttttgaattgggaaagatctttgtcactaattcatggaagaaatcttgaggattttgaactcaaggtcacaaattataatatta 31474818  T
Q  263 gggttccaattttatatatttgaggaaga 291  Q
    ||||||||| |||||||||||| ||||||    
T  31474819 gggttccaaatttatatatttggggaaga 31474847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 3e-61; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 5784374 - 5784666
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||| || ||   |||||||||||||||| |||||||    
T  5784374 aagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgtccatatgaccacccctcatcattttagattca 5784473  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| |||||||||||  |||||||  |||||||| |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  5784474 atttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacgtg 5784573  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  5784574 acccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 5784666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 63 - 293
Target Start/End: Original strand, 51123115 - 51123342
Alignment:
Q  63 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnt 162  Q
    |||||||| |||||||||||| ||||||||||||||||| |  |||| ||||  |||||| |||||||| ||||||    ||||||||||||            
T  51123115 ttttgcccatacacccacccc-catcatttcagattcaattacaacagttttatttgaaggaattttggggattttttgattcggattcaatcaaaaa-- 51123211  T
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||| | | ||| |||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| |||||   ||||||||||||    
T  51123212 attagggtttgaggttatttcaattggggaagaacgttacctctaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatta 51123311  T
Q  263 gggttccaattttatatatttgaggaagaaa 293  Q
    |||||||||||||||| ||||||||||||||    
T  51123312 gggttccaattttatacatttgaggaagaaa 51123342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 11153128 - 11152837
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||| |||||||||||||||||||||||||  | ||||| ||| |||||||| |||  |  |||||||| ||   ||||||| |||||||| |||||||    
T  11153128 aagcattctcacatcaccattaaacatggaggatgaagatgaagtttgactttgatagctctttttgcccatatgaccacccc-catcattttagattca 11153030  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| |||||||||||  |||||||  ||||||   |||| ||||||||        ||||||||||| |  ||||||| |||||||||||| |     
T  11153029 atttcaacagttttgcttgaatgaattttgcagattttagttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacatg 11152930  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||||    
T  11152929 acccttaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatacatttggggaagaaa 11152837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 42558532 - 42558248
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||  | ||| |||| || |||||||| ||| |||||| | ||||||||||||||||    
T  42558532 aagcactctcacatcaccattaaacatggagcttgaagatgaagctcaaatttgataactgattttgcccatacgcccaccacccatcatttcagattca 42558433  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    |  ||||||||| |||||||||||||||||  ||||||| |||| |||||||||        |||||||||||||| |||| |||||||| ||||||||     
T  42558432 atctgaacaattatgcttgaagaaattttgcggattttggattttggattcaatcaaaaga-attagggtttgaagtttttagaattgggaaagaacgtc 42558334  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 296  Q
      || |||||| || ||||| ||||||  |          ||||| ||| ||||||||||||||||||||||||| || ||||| |||||||||||    
T  42558333 gtcattaattaatggaagaatttttggaga----------tagatgacagattgtaaaattagggttccaattttctagatttggggaagaaagag 42558248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 163 - 280
Target Start/End: Original strand, 25172701 - 25172818
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||| |||| | ||||||||||||    
T  25172701 attagggtttgaatttttttaaattggggaagaacgttaccactaattattggaagaaattttggagattttggagcgtacattaaagattgtaaaatta 25172800  T
Q  263 gggttccaattttatata 280  Q
    |||||| |||||||||||    
T  25172801 gggttctaattttatata 25172818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 12 - 297
Target Start/End: Complemental strand, 45379658 - 45379374
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 111  Q
    ||||||| |||||| |||||||||||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  45379658 catcaccgttaaacttggagcttaaagatgaagctcgactttcataacaattttttcccatattcccacccc-cttcatttcagattcaatttcaatagt 45379560  T
Q  112 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 211  Q
    ||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| ||| ||||||||||||||||   |||||| ||||    
T  45379559 tttgcttcaagaaattttgtggattttggctttcagattcaatacaaaaaaattagggtttcaagttttctgaattggggaagaactagaccacttatta 45379460  T
Q  212 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||| ||||||||| | ||| |||||| |||||    
T  45379459 ttggaggaaatttaggtgattttagaatgtagattgcaaattgtgtaattagggttctaattttatacaattggggaagacagagc 45379374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 12 - 291
Target Start/End: Original strand, 44158807 - 44159088
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 111  Q
    |||||||||||||| || ||||| ||||| ||||| ||||||||||| |  |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  44158807 catcaccattaaacttgaagcttgaagatgaagctcgactttcataactattttttcccataatcccaccccccttcatttcagattcaatttcaatagt 44158906  T
Q  112 tttgcttgaagaaattttggtgattttgaatttcggattcaat--nnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaat 209  Q
    ||||||| |||||||||||  |||||||  |||| ||||||||          |||||||||| ||| |||||||||||||||||||| | |||||| ||    
T  44158907 tttgcttcaagaaattttgtggattttggctttcagattcaatacgaaaaaaaattagggtttcaagttttttgaattggggaagaacttgaccacttat 44159006  T
Q  210 tattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaaga 291  Q
    ||||| | ||||||| ||  ||||| || |||||||| || |||||  ||| |||||| |||||||||| | ||| ||||||    
T  44159007 tattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaatcagggtttcaattttatacaattggggaaga 44159088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 31803204 - 31803500
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||||||| ||| ||||||| |||||||| ||||| || ||||||||||||||  | |||| || | |  |||||||| ||||||||||||||||    
T  31803204 aagcactctcacaacactattaaacttggagcttgaagatgaaacttgactttcataaccgttttttccat-attcccaccccacatcatttcagattca 31803302  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgt 199  Q
    | || || | |||||||| |||||||||||  |||| ||  |||| |||||| |        | ||||||||||||| |||||||||||||| |||||      
T  31803303 atttcaatagttttgcttcaagaaattttgaggattctggctttcagattcactacgaaaaaaattagggtttgaagttttttgaattggggcagaactg 31803402  T
Q  200 taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
     |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  |||||  |||||||||||||| | ||| ||||||||||||    
T  31803403 aaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaacgttccaattttatacaattggggaagaaagagc 31803500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 297
Target Start/End: Original strand, 42135761 - 42136045
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 111  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  42135761 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccatattcccaccccccttcatttcagattcaatttcaatagt 42135860  T
Q  112 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 211  Q
    ||||||| |||||||||||   ||||||| |||| ||||||||        |||| ||||| ||| ||||||||||||||||||||   | |||| ||||    
T  42135861 tttgcttcaagaaattttgtgaattttgactttcagattcaatacgaaaaaatta-ggtttcaagttttttgaattggggaagaactggagcacttatta 42135959  T
Q  212 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||| |  |||||| ||  ||||| || |||||||| || |||||  ||||||| ||||||||||||| | ||| |||||| |||||    
T  42135960 ttggagaaaatttaggtgattttagaatgtagattgcagattgtgtaattaggattccaattttatacaattggggaagatagagc 42136045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 46637351 - 46637056
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | |||| || | |  |||||||| |||||||| |||||||    
T  46637351 aagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccgttttttccat-attcccaccccacatcattttagattca 46637253  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgt 199  Q
    | || || | |||||||| |||||||||||  |||| ||  ||||  ||||| |        | ||||||||||||| |||||||||||||| |||||      
T  46637252 atttcaatagttttgcttcaagaaattttgaggattctggctttcaaattcactacgaaaaaaattagggtttgaagttttttgaattggggtagaactg 46637153  T
Q  200 taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
     |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  ||||| ||||||||||||||| | ||| ||||||||||||    
T  46637152 aaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaaggttccaattttata-aattggggaagaaagagc 46637056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 297
Target Start/End: Original strand, 6576774 - 6576906
Alignment:
Q  165 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 264  Q
    |||||||||||| ||||||||||||| || |||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||    
T  6576774 tagggtttgaagttttttgaattgggaaaaaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtttaattagg 6576873  T
Q  265 gttccaattttatatatttgaggaagaaagagc 297  Q
    |||||||||||||| | ||| ||||||||||||    
T  6576874 gttccaattttatacaattggggaagaaagagc 6576906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 297
Target Start/End: Complemental strand, 35478660 - 35478378
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 111  Q
    |||||||||||||| || ||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  35478660 catcaccattaaacttgaagcttcaagatgaagctcgactttcataacaattttttcccatattcccaccccccatcattttggattttatttcaatagt 35478561  T
Q  112 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 211  Q
    ||||||| ||||| |||||  |||||||  |||  ||||||||        |||||||||||||| |||||||||||||||| |||   |||||| ||||    
T  35478560 tttgcttcaagaagttttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaaaaactaaaccacttatta 35478461  T
Q  212 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||| | ||||||| ||  ||||| ||||||||||   | |||||  |||||||||| |||||||| | | ||||||||||||||||    
T  35478460 ttggaggaaatttaggtgattttagagtgtagat---agattgtgtaattagggtttcaattttaaacaattgaggaagaaagagc 35478378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 50554634 - 50554500
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| ||| ||| | ||| ||| ||| ||||    
T  50554634 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaagtctaggtaacaaattataacatta 50554535  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| |||||||||||| ||||||||||||    
T  50554534 gggttccaaatttatatatttggggaagaaagagc 50554500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 297
Target Start/End: Complemental strand, 33679680 - 33679549
Alignment:
Q  166 agggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattaggg 265  Q
    ||||||||||| ||||||||||||||||||||   || | | ||||||| | ||||||| ||  ||||| ||||||| ||| || |||||  ||||||||    
T  33679680 agggtttgaagttttttgaattggggaagaactggactagttattattggaggaaatttaggtgattttagagtgtatattgcagattgtgtaattaggg 33679581  T
Q  266 ttccaattttatatatttgaggaagaaagagc 297  Q
    |||||||||| || | ||||||||||||||||    
T  33679580 ttccaattttgtacaattgaggaagaaagagc 33679549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 31237273 - 31237139
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||| || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  31237273 attagggttttaagttttttgaattggggaagaacattgacatcaattaatggaagaaatttgggggattttgaactctaggtaacaaattataacatta 31237174  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    |||||||||  ||||||||||| ||||||||||||    
T  31237173 gggttccaaaattatatatttggggaagaaagagc 31237139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 18058254 - 18058121
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||| ||||||| |||| |||||||||||||| |||  ||  ||||| |  ||||| ||||| | |||||| | | ||||| ||| ||||||||||||    
T  18058254 attaggttttgaagtttttagaattggggaagaatgttgtcatcaattaattgaagaagttttgaggattttgaactctagatgacaaattgtaaaatta 18058155  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
     ||||||||||||||| ||||| |||||||||||    
T  18058154 aggttccaattttataaatttggggaagaaagag 18058121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 18183185 - 18183063
Alignment:
Q  7 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 106  Q
    ||||||||||||||||||| |||||||| ||||| || || ||||||||||| || |||| ||| |   |||||||| ||||||||||||| ||| || |    
T  18183185 tctcacatcaccattaaacttggagcttgaagatgaaactcgactttcataactgttttttcccatgttcccacccc-catcatttcagatccaatttca 18183087  T
Q  107 acaattttgcttgaagaaattttg 130  Q
    | | |||||||| |||||||||||    
T  18183086 atagttttgcttcaagaaattttg 18183063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 293
Target Start/End: Original strand, 15105986 - 15106116
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | ||||| | ||  ||| ||| ||||    
T  15105986 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgtaagaaattttggggattttgaactgtaggtgacgaattataacatta 15106085  T
Q  263 gggttccaattttatatatttgaggaagaaa 293  Q
    || |||||| |||||||||||| ||||||||    
T  15106086 ggattccaaatttatatatttggggaagaaa 15106116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 6817333 - 6817200
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| |||  ||||||||||||||||||| ||  ||  ||||  || |||||||||| ||||||||| | | ||| | ||| ||| ||| ||||    
T  6817333 attagggttttaagtcttttgaattggggaagaacattgacatcaattcatggaagaaattttaggaattttgaactctaggtaacaaattataacatta 6817234  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    |||||| || |||||||||||| |||||||||||    
T  6817233 gggttctaaatttatatatttggggaagaaagag 6817200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 18180900 - 18180818
Alignment:
Q  164 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagatt 246  Q
    ||||||||||||| |||||||||||||||||||    |||||| |||| || | ||||||||||  |||||||||||||||||    
T  18180900 ttagggtttgaagttttttgaattggggaagaatcggaccacttattactggaggaaattttggtgattttggagtgtagatt 18180818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 45045365 - 45045232
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | | | ||| ||| ||||    
T  45045365 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctatgtgataaattataacatta 45045266  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||| |||||||||||| |||||||||||    
T  45045265 gggttccaaatttatatatttggggaagaaagag 45045232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 278
Target Start/End: Original strand, 27952167 - 27952282
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | |||||||  |  || || || ||||||||| | |||||  |||||    
T  27952167 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaagtgatattagaatgtagattaaaaattgtgtaatta 27952266  T
Q  263 gggttccaattttata 278  Q
    ||||| ||||||||||    
T  27952267 gggttacaattttata 27952282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 297
Target Start/End: Original strand, 2870712 - 2870845
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  2870712 attagggttttaag-tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 2870810  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| || ||||||||| | ||||||||||    
T  2870811 gggttccaaattgatatatttgggaaagaaagagc 2870845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 3012309 - 3012175
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| |   |||||| | | ||| | ||| |||  || ||||    
T  3012309 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttggtagattttgaactataggtgacaaattagaacatta 3012210  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| |||||||||||| ||||||||||||    
T  3012209 gggttccaaatttatatatttggggaagaaagagc 3012175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 33679814 - 33679696
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 111  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||  ||  |||||||| ||||||||| ||||  | || || | |    
T  33679814 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcctatattcccaccccccatcatttcggattttatttcaatagt 33679715  T
Q  112 tttgcttgaagaaattttg 130  Q
    ||||||| |||||||||||    
T  33679714 tttgcttcaagaaattttg 33679696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 370
Target Start/End: Original strand, 25172876 - 25172944
Alignment:
Q  302 cattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgct 370  Q
    |||||||| ||||||||| || ||  ||||||||||||||||||||| |||  || |||||||||||||    
T  25172876 cattttctgcaaatcaatcaaattcgtccttggaaattttggtcactatcggtcaaattagtctctgct 25172944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 293
Target Start/End: Complemental strand, 33599580 - 33599542
Alignment:
Q  255 taaaattagggttccaattttatatatttgaggaagaaa 293  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  33599580 taaaattagggttccaaatttatatatttgtggaagaaa 33599542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 6e-59; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 39922514 - 39922806
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  | ||||||||| ||   ||||| | |||||||| |||||||    
T  39922514 aagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctccttttgcccatatgaccacctcccatcattttagattca 39922613  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  39922614 atttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttggggaagaacgtg 39922713  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  39922714 acccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 39922806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 4 - 293
Target Start/End: Complemental strand, 42879865 - 42879576
Alignment:
Q  4 cactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaat 103  Q
    ||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||||| |    
T  42879865 cactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttagattcaatt 42879766  T
Q  104 tgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttacc 203  Q
    | |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||| |||    
T  42879765 tcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacgtgacc 42879666  T
Q  204 actaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
      ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  42879665 cttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 42879576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 39084659 - 39084951
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||||    
T  39084659 aagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttagattca 39084758  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  39084759 atttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttggggaagaacgtg 39084858  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  39084859 acccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagagttccaattttatatatttggggaagaaa 39084951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 39190326 - 39190618
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||||    
T  39190326 aagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttagattca 39190425  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || || | |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  39190426 atttcaatagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacgtg 39190525  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  39190526 acccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 39190618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 43778971 - 43778681
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  | ||||||||| ||   ||||| | |||||||| |||||||    
T  43778971 aagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctccttttgcccatatgaccacctcccatcattttagattca 43778872  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  43778871 atttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgcaattttttga-ttggggaagaacgtg 43778774  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||    
T  43778773 acccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggcgaagaaa 43778681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 5485559 - 5485851
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||  |||||||||||| |||  |  |||||||| ||   || || | |||||||| |||||||    
T  5485559 aagcactctcacatcaccattaaacatggaggatgaagacgaagcttgactttgatagctctttttgcccatatgaccgcctcccatcattttagattca 5485658  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  5485659 atttcaacatttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttggggaagaacgtg 5485758  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| |||||  |||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  5485759 acccttaattattggaagaaaatttggagattttggagtgtagattacacatggtaaaattagggttccaattttatatatttggggaagaaa 5485851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 44993392 - 44993100
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||| |||||||||||||||||||||||  | ||||| || ||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||||    
T  44993392 aagcactttcacatcaccattaaacatggaggatgaagatgaaacttgactttgatagctctttttgcccatatgaccacctcccatcattttagattca 44993293  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  44993292 atttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacgtg 44993193  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| ||||   |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  44993192 acccttaattattggaagaaaatttgaagattttggagtgtagattacacattgtaaaattaggattccaattttatatatttggggaagaaa 44993100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 163 - 292
Target Start/End: Complemental strand, 13438275 - 13438146
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||    
T  13438275 attagggtttgaagttttttgaattggggaagaaagttaccactaattattggaagaaattttgggaattttggagtgtacattaaagattgtaaaatta 13438176  T
Q  263 gggttccaattttatatatttgaggaagaa 292  Q
    ||||| | |||||||||||||| |||||||    
T  13438175 gggtttctattttatatatttggggaagaa 13438146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 97 - 282
Target Start/End: Original strand, 25994708 - 25994897
Alignment:
Q  97 ttcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta----ttagggtttgaagctttttgaattgggga 192  Q
    ||||| ||||||| ||||||||||||||||||||| |||| ||  |||||||||||||        |    | |||||||| || ||||||||||| |||    
T  25994708 ttcaatttgaacagttttgcttgaagaaattttggggattctggttttcggattcaataaaaaaaaaaaaatcagggtttggagttttttgaattgagga 25994807  T
Q  193 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 282  Q
    |||| ||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  25994808 agaatgttaccactaattattggaagaaattttgaggattttggagtgtagattacagattgtaaatttagagttccaattttatatatt 25994897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 163 - 293
Target Start/End: Complemental strand, 230869 - 230740
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||  |||||||||| || ||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||    
T  230869 attagggtttgaaattttttgaattagg-aagaacgttaccactaattattggaagaaattttggggactttggagtgtagattacagattgtaaaatta 230771  T
Q  263 gggttccaattttatatatttgaggaagaaa 293  Q
    || | |||||||||||||||||  |||||||    
T  230770 ggatgccaattttatatatttggagaagaaa 230740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 2 - 293
Target Start/End: Original strand, 32653139 - 32653430
Alignment:
Q  2 agcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaa 101  Q
    ||||||||||||||||||||||||||| ||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| | |||||| ||||||||    
T  32653139 agcactctcacatcaccattaaacatgaaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccc-cttcattttagattcaa 32653237  T
Q  102 attgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgtt 200  Q
     || |||| |||||||||||  |||||||  |||||||  ||||  |||||||        | |||||||||| |  ||||||| |||||||||||| |     
T  32653238 tttcaacagttttgcttgaatgaattttgcagattttggttttcatattcaattaaaaaaaaattagggtttgtaattttttgatttggggaagaacatg 32653337  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||| ||| |||||||||||||||  ||||||||    
T  32653338 acccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagagtttcaattttatatattttgggaagaaa 32653430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 4519973 - 4520270
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||| | ||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||   ||||||| |||||||||| |||||    
T  4519973 aagcactttgacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatatttccacccc-catcatttcatattca 4520071  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta--ttagggtttgaagctttttgaattggggaagaacg 198  Q
      || || | |||||||| |||||||||||  |||||||  |||| ||||||||        |  ||||||||| ||| |||||||||||| |||||||     
T  4520072 ttttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacaaaaaaaaattagggtttcaagttttttgaattggagaagaact 4520171  T
Q  199 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
      |||||| |||||   | ||||||||||  ||||| ||||||||||| || ||| |  ||||||||||||||||||||||| |||  |||||||||||    
T  4520172 gaaccacttattatcagaggaaattttggtgattttagagtgtagattgcaaattttgtaattagggttccaattttatataattggcgaagaaagagc 4520270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 278
Target Start/End: Complemental strand, 44557183 - 44556917
Alignment:
Q  12 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 111  Q
    |||||||||||||| |||||||  ||||| ||||| |||||||||||  | |||| ||| ||  |||||||||||||||||  ||||  | || || | |    
T  44557183 catcaccattaaacttggagctagaagatgaagctcgactttcataacagttttttcccatattcccacccctcatcattttggattttatttcaatagt 44557084  T
Q  112 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 211  Q
    ||||||| ||||| |||||  |||||||  |||  ||||||||        |||||||||||||| ||||||||||||||||||||   |||||| ||||    
T  44557083 tttgcttcaagaatttttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaactggaccacttatta 44556984  T
Q  212 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 278  Q
    ||| | ||||||| ||  ||||| ||||||||||| || |||||  ||||||  |||||||||||||    
T  44556983 ttggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagaattccaattttata 44556917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 39294553 - 39294625
Alignment:
Q  164 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttgg 236  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  39294553 ttagggtttgaagttttttgaattggggaagaacgttaccactaattattggaagaaattttggggattttgg 39294625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 297
Target Start/End: Original strand, 27626246 - 27626530
Alignment:
Q  13 atcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaatt 112  Q
    ||||||||||||| |||||||| ||||| ||||| |||||||||||  | ||||  || ||  |||||||| ||||||||  ||||  | || || | ||    
T  27626246 atcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttgccatattcccaccccccatcattttggattttatttcaatagtt 27626345  T
Q  113 ttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattat 212  Q
    |||||| |||||||||||  |||||||  |||  ||||||||        |||||||||||||| |||||||||||||||||||    |||||| |||||    
T  27626346 ttgcttcaagaaattttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaattggaccacttattat 27626445  T
Q  213 tgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    || | |||||||     ||||| |||||||||||  | |||||  ||||||||||||||||||||| | ||| ||||||||||||    
T  27626446 tggaggaaatttaaatgattttagagtgtagattgtagattgtgtaattagggttccaattttatacaattggggaagaaagagc 27626530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 296
Target Start/End: Complemental strand, 51041314 - 51041027
Alignment:
Q  7 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 106  Q
    ||||||||||||||||||| |||||||| ||||| || || ||||||||||| || |||| ||| ||  |||||||  |||||||||| |||||| || |    
T  51041314 tctcacatcaccattaaacttggagcttgaagatgaaactcgactttcataactgttttttcccatattcccaccc--catcatttcatattcaatttca 51041217  T
Q  107 acaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 206  Q
    | | |||||||| ||    |||||  |||||||| |||| ||||||||         ||||||||||||| ||| ||||| ||||||||||   ||||||    
T  51041216 atagttttgcttcaaatttttttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttatgaataggggaagaaccgaaccact 51041117  T
Q  207 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 296  Q
     ||||  | | |||||  |||  |||||||| |||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||||    
T  51041116 tattaccggaggaaatcatggtgattttggaatgtagattgcagattgtgtaattagggttacaattttatacaattggggaagaaagag 51041027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 28100977 - 28100865
Alignment:
Q  183 gaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 282  Q
    ||||||||||||||||||  ||  ||||| || |||||||||||||||||||||| | ||||||| | |||||| |||||| ||| |||||||||| |||    
T  28100977 gaattggggaagaacgttgtcatcaattaatggaagaaattttgggaattttggactctagattataaattgtacaattagagtttcaattttatagatt 28100878  T
Q  283 tgaggaagaaaga 295  Q
    || ||||||||||    
T  28100877 tggggaagaaaga 28100865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 13449984 - 13450107
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||| ||||||||||||||||||| ||||  | ||||||||| ||||         |||||||||||||| |||| | ||||||||||||    
T  13449984 attagggtttgaagttttttgaattggggaagaatgttaaaaataattattggaaga---------aattttggagtgtacattaaagattgtaaaatta 13450074  T
Q  263 gggttccaattttatatatttgaggaagaaaga 295  Q
    ||||| |||||||||| |||||  |||||||||    
T  13450075 gggtttcaattttatacatttggtgaagaaaga 13450107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 2691818 - 2691684
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||  ||  ||  ||||| || ||||||||||||  |||||| | | ||| | ||| ||| ||| ||||    
T  2691818 attagggttttaagttttttgaattggggaagaattttgtcatcaattaatggaagaaattttggagattttgaactctaggtgacaaattataacatta 2691719  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| |||||||||||| ||||||||||||    
T  2691718 gggttccaaatttatatatttggggaagaaagagc 2691684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 20820423 - 20820290
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||| ||| ||| |||||||||||| ||||||| ||  ||  ||||| || ||||||||||||| |||||  | | ||| | ||| ||| ||||||||    
T  20820423 attaggtttttaagttttttgaattggagaagaactttgtcatcaattagtggaagaaattttggggattttaaactttaggtgacaaattataaaatta 20820324  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||| |||||||||||||| |||||||||    
T  20820323 gggttccaaatttatatatttgagaaagaaagag 20820290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 35997284 - 35997568
Alignment:
Q  19 attaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgctt 118  Q
    ||||||| || ||||| ||||| ||||| ||||||| |||  | |||| ||| ||  |||||||| ||||||||||||||||| || || | ||||||||    
T  35997284 attaaacttgcagcttgaagatgaagctcgactttcttaacagttttttcccatattcccaccccccatcatttcagattcaatttcaatagttttgctt 35997383  T
Q  119 gaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaa------gaacgttaccactaattat 212  Q
     |||||||||||  |||||||  |||| ||||||||         ||||||||| ||| ||||| ||||||||||      ||||   |||||| |||||    
T  35997384 caagaaattttgtggattttggctttcagattcaatacgaaaaatttagggtttcaagttttttaaattggggaagaactggaactggaccacttattat 35997483  T
Q  213 tgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    || | ||||||| ||  || || || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  35997484 tggaggaaatttaggttatattagaatgtagattgcagattgtgtaattagggttccaattttatacaattggggaagacagagc 35997568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 346
Target Start/End: Original strand, 39294645 - 39294721
Alignment:
Q  270 aattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtca 346  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||   | ||||||||||||||||    
T  39294645 aattttatatatttggggaagaaagagaaaagcattttctgcaaatcaatcaatttagcctttggaaattttggtca 39294721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 47942413 - 47942541
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  47942413 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 47942512  T
Q  263 gggttccaattttatatatttgaggaaga 291  Q
    |||||||||||||||| | ||| ||||||    
T  47942513 gggttccaattttatacaattggggaaga 47942541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 54387537 - 54387670
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||| | |||||| | | ||| | ||| ||||||| ||||    
T  54387537 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttgaggattttgaactctaggtgacaaattgtaacatta 54387636  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||| |||||||||||  || ||||||||    
T  54387637 gggttccaaatttatatatttagggcagaaagag 54387670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 44793358 - 44793243
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | |||||||  |  || || || ||||||||| | |||||  |||||    
T  44793358 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttatgtgatattagaatgtagattatagattgtgtaatta 44793259  T
Q  263 gggttccaattttata 278  Q
    ||||||||||||||||    
T  44793258 gggttccaattttata 44793243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 11254512 - 11254378
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    ||||||||||  || |||||||||||||||||||| ||  ||  ||||| || ||||| ||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  11254512 attagggttttgagttttttgaattggggaagaacattgacatcaattaatggaagaattttgggggattttgaactctaggtgacaaattataacatta 11254413  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||| ||| |||||||||||| ||||||||||||    
T  11254412 gggtttcaaatttatatatttggggaagaaagagc 11254378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 10544693 - 10544778
Alignment:
Q  206 taattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaaga 291  Q
    |||||| || ||||||||||||| |||||||| ||||||  |   |||| ||||||||||||||||||||||| ||||| ||||||    
T  10544693 taattaatggaagaaattttggggattttggactgtagacgagggattgaaaaattagggttccaattttatagatttggggaaga 10544778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 26397635 - 26397715
Alignment:
Q  216 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||||||| |||||| | | ||||| ||| ||| |||| ||||||||| ||||||||| ||||||||||||||||||    
T  26397635 aagaaattttggggattttgaactctagatgacaaattataaa-ttagggttctaattttatagatttgaggaagaaagagc 26397715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 49524394 - 49524527
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | |  || | ||| ||| ||| ||||    
T  49524394 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactccaggtgacaaattataacatta 49524493  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||| |||||||| ||| |||||||||||    
T  49524494 gggttccaaatttatatacttggggaagaaagag 49524527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 10544515 - 10544605
Alignment:
Q  11 acatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaa 101  Q
    ||||||||||||||||| |||||| ||||| ||| | |||||| | || || |||||||| ||| |||||| | |||||||||| ||||||    
T  10544515 acatcaccattaaacatagagcttgaagatgaagttcgactttgagaactgtttttgcccatacgcccaccacccatcatttcatattcaa 10544605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 35402202 - 35402069
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| ||||| |||||||||||||| ||  ||  ||||  || ||||||||| ||| |||| | | | ||| | ||| ||| ||| ||||    
T  35402202 attagggttttaagtttttttaattggggaagaacattgacatcaattcatggaagaaatttgggggattt-gaactctaggtgacaaattataacatta 35402104  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| |||||||||||| ||||||||||||    
T  35402103 gggttccaaatttatatatttggggaagaaagagc 35402069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 230728 - 230650
Alignment:
Q  270 aattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcact 348  Q
    ||||||||||| ||| |||||||| ||||||||||||||  |||||||   || ||  |||||||||||| ||||||||    
T  230728 aattttatataattggggaagaaaaagcaaagcattttcagcaaatcagccaaattagtccttggaaattatggtcact 230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 42982211 - 42982248
Alignment:
Q  259 attagggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  42982211 attagggttccaaatttatatatttggggaagaaagag 42982248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 20494182 - 20494146
Alignment:
Q  260 ttagggttccaattttatatatttgaggaagaaagag 296  Q
    |||||||||||| |||||||||||| |||||||||||    
T  20494182 ttagggttccaaatttatatatttggggaagaaagag 20494146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 9e-52; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 17951144 - 17950853
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||||||  |   ||||| | |||||||| |||||||    
T  17951144 aagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccaaatgaccacctcccatcattttagattca 17951045  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  17951044 atttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgtaattttttgatttggggaagaacgtg 17950946  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  17950945 acccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 17950853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 3 - 293
Target Start/End: Complemental strand, 35174964 - 35174674
Alignment:
Q  3 gcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaa 102  Q
    ||||||||| |||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||    |||| | ||| |||| ||||||||     
T  35174964 gcactctcatatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgatcacctcccattattttagattcaat 35174865  T
Q  103 ttgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttac 202  Q
    || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||| ||    
T  35174864 ttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacgtgac 35174765  T
Q  203 cactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  35174764 ccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 35174674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 17936044 - 17936339
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgctttt-gcccttacacccacccctcatcatttcagattc 99  Q
    ||||| ||| |||||||||||||||||  |  || ||||| ||||| |||||| | || || |||| |||| |||  ||||| | ||||||||| |||||    
T  17936044 aagcattctgacatcaccattaaacataaattttgaagatgaagctcgactttgagaactgttttttgcccatacgtccaccacccatcatttcggattc 17936143  T
Q  100 aaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgt 199  Q
    ||  ||||||||||||||||||    |||||| ||||||| ||||| ||||||||        |||||||||||||| |||| ||| | || || |||||    
T  17936144 aatctgaacaattttgcttgaattttttttggggattttggatttcagattcaatcaaaacaaattagggtttgaagtttttagaagtaggcaataacgt 17936243  T
Q  200 taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 295  Q
    |  || |||||| || |||||||||||||||||||||| ||||||||| | |||| |||||||||||| |||||||||| ||||||||||||||||    
T  17936244 tgtcattaattaatggaagaaattttgggaattttggattgtagattagagattgaaaaattagggtttcaattttatagatttgaggaagaaaga 17936339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 34344832 - 34345123
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||| | |||||||||||| |||  |  |||||||| ||   |||||||  ||||||| |||||||    
T  34344832 aagcactctcacatcaccattaaacatggaggatgaagttgaagcttgactttgatagctctttttgcccatatgaccacccca-atcattttagattca 34344930  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| |||||||| ||  |||||||  |||||||  ||||  || ||||        ||||||||||| |  ||||| | | ||||||||||||     
T  34344931 atttcaacacttttgcttaaatgaattttgcagattttggttttcatatccaattaaaaaaaattagggtttgcaatttttttattcggggaagaacgtg 34345030  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| ||||   |||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||    
T  34345031 acccttaattattggaagaaaatttgaagattttggagtgtagattacacattgtaaagttagggttccaattttatatattttaggaagaaa 34345123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 165 - 293
Target Start/End: Complemental strand, 4289838 - 4289710
Alignment:
Q  165 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 264  Q
    ||||||||| |  ||||||| |||||||||||||| |||  ||||||||| |||||| |||||  |||||||||| ||||||||| ||||||||||||||    
T  4289838 tagggtttgcaattttttgatttggggaagaacgtgacccttaattattggaagaaaatttggagattttggagtatagattacacattgtaaaattagg 4289739  T
Q  265 gttccaattttatatatttgaggaagaaa 293  Q
     ||||||||||||||||||| ||||||||    
T  4289738 attccaattttatatatttggggaagaaa 4289710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 171 - 344
Target Start/End: Original strand, 31210129 - 31210313
Alignment:
Q  171 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 270  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| |  | ||||| |  |||||||||||||||||||| |||||||||||||| || ||    
T  31210129 ttgaagttttttgaattggggaagaaagttaccactaattattggataatatttttgagattttggagtgtagattacagattgtaaaattaggttttca 31210228  T
Q  271 atttt--------atata---tttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggt 344  Q
    || ||        | |||    |||||| ||||||||||||||||||||||||||||||| |||||  |||||| ||||||||||    
T  31210229 atatttggggaagaaataaccgttgagggagaaagagcaaagcattttctacaaatcaatcaatttagtccttgaaaattttggt 31210313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 33277234 - 33277101
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| |||  |  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| |||||| |    
T  33277234 attagggttttaagttttttgaattggggaagaactttaatatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataaaatca 33277135  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| ||||||||||||| |||||||||||    
T  33277134 gggttccaaatttatatatttga-gaagaaagagc 33277101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 7371586 - 7371453
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  7371586 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 7371487  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||| |||||||||||| |||||||||||    
T  7371486 gggttccaaatttatatatttggggaagaaagag 7371453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 30640027 - 30639903
Alignment:
Q  171 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 270  Q
    |||||| ||||||||||  ||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||  ||||| |||||||    
T  30640027 ttgaagttttttgaattatggaagaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattatggttcca 30639928  T
Q  271 attttatatatttgaggaagaaaga 295  Q
    |||||||| | || |||||||||||    
T  30639927 attttatacaattaaggaagaaaga 30639903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 297
Target Start/End: Original strand, 11356803 - 11356922
Alignment:
Q  178 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 277  Q
    |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||    
T  11356803 tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtaacaaattataacattagggttccaaatttat 11356902  T
Q  278 atatttgaggaagaaagagc 297  Q
    ||||||| ||||||||||||    
T  11356903 atatttggggaagaaagagc 11356922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 293
Target Start/End: Complemental strand, 33267419 - 33267342
Alignment:
Q  216 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||||||||||| ||| |||||||| ||||||||    
T  33267419 aagaaattttggggattttgaactctaggtgacaaattataacattagggttccaaatttgtatatttggggaagaaa 33267342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 14338061 - 14337985
Alignment:
Q  207 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 283  Q
    ||||| || ||||||||||||| |||||| | | ||  | ||| ||| ||||||||||||||||| |||||||||||    
T  14338061 aattaatggaagaaattttggggattttgaactctatgtgacaaattataaaattagggttccaaatttatatattt 14337985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 9e-49; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 163 - 297
Target Start/End: Original strand, 1344478 - 1344612
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||||| | ||||||||||||    
T  1344478 attagggtttgaagttttttgaattggggaagaacgttaccaccaattattggaagaaattttggagattttggagtgtagattaaagattgtaaaatta 1344577  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    |||||||||||||||||||||  ||||||||||||    
T  1344578 gggttccaattttatatatttagggaagaaagagc 1344612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 42619867 - 42619581
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    |||||||||||||||||||||||||||||||  | ||||| ||||||||||||  ||   |||    ||| ||   ||||||| |||||||| |||||||    
T  42619867 aagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttggta---gctc---cccatatgaccaccccccatcattttagattca 42619774  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||||     
T  42619773 atttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacgtg 42619674  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||  ||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||||    
T  42619673 acccttaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatacatttggggaagaaa 42619581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 168 - 370
Target Start/End: Original strand, 24497749 - 24497969
Alignment:
Q  168 ggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggtt 267  Q
    ||||||||| |||||||||||||||||||||||| || | ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  24497749 ggtttgaaggtttttgaattggggaagaacgttatcattgattattggaagaaattttgggaattttggagtgtagattacttattgtaaaattagagtt 24497848  T
Q  268 ccaattttatatattt------------------gaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactg 349  Q
     |||||||||||||||                  | ||||||||||||||| |||||| | ||||||||| |||||| |||||| |||||||| |||||     
T  24497849 tcaattttatatatttagggaagaaatagccattggggaagaaagagcaaaacattttatgcaaatcaatcaatttggtccttgtaaattttgatcacta 24497948  T
Q  350 tcgaccacattagtctctgct 370  Q
    ||| ||| |||||||||||||    
T  24497949 tcggccaaattagtctctgct 24497969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 38177219 - 38176923
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| ||||||||||||||||    
T  38177219 aagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactattttttcccatatttccaccccccatcatttcagattca 38177120  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || || | |||||||| |||||||||||  |||||||  ||||  |||||||        |||||||||||||| ||||||||||||||||||||       
T  38177119 atttcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaactgg 38177020  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    |||| | || |||| | || ||||||| |||||| ||||||| |||    |||||  ||||||||||||||| ||||| | ||| ||||||||||||    
T  38177019 accatttataattggaggatattttggtaattttagagtgtaaattgttgattgtgtaattagggttccaatgttatacaattggggaagaaagagc 38176923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 38204443 - 38204147
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| ||||||||||||||||    
T  38204443 aagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactattttttcccatatttccaccccccatcatttcagattca 38204344  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || || | |||||||| |||||||||||  |||||||  ||||  |||||||        |||||||||||||| ||||||||||||||||||||       
T  38204343 atttcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaactgg 38204244  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    |||| | || |||| | || ||||||| |||||| ||||||| |||    |||||  ||||||||||||||| ||||| | ||| ||||||||||||    
T  38204243 accatttataattggaggatattttggtaattttagagtgtaaattgttgattgtgtaattagggttccaatgttatacaattggggaagaaagagc 38204147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 18727150 - 18726853
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||||||| ||||||||||| |||||||| ||||| |||||| ||||||||||  | |||| ||  ||  |||||||| ||||||||||||||||    
T  18727150 aagcactctcacaacaccattaaacttggagcttgaagatgaagctttactttcataaccgttttttcctatattcccaccccacatcatttcagattca 18727051  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgt 199  Q
    | || || | | |||||| |||||||||||  |||||||  |||  |||||| |        | ||||||||||||| |||||||||||||| |||||      
T  18727050 atttcaatagtcttgcttcaagaaattttgaggattttggctttgagattcactacgaaaaaaattagggtttgaagttttttgaattggggcagaactg 18726951  T
Q  200 taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
     |||||| ||||||| |  |||||||    ||| | |||||||||||||| |||||  ||||||||||||||||||||| | ||| ||||||||||||    
T  18726950 aaccacttattattggagaaaattttcatgattatagagtgtagattacagattgtgtaattagggttccaattttatacaattggggaagaaagagc 18726853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 35291630 - 35291343
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||| ||||||||||||||||| |||||||| ||||| || |||||||||||||| || |||| ||| ||  |||||||| ||||||||||||| ||    
T  35291630 aagcactatcacatcaccattaaacttggagcttgaagatgaaacttgactttcataactgttttttcccatattcccacccc-catcatttcagatcca 35291532  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || || | |||||||| |||||||||||  ||||||||  |||  |||||||         ||||||||||||| ||| ||||||||||||||||       
T  35291531 atttcaatagttttgcttcaagaaattttgaggattttgacattcaaattcaatgcaaaaa-gttagggtttgaagttttgtgaattggggaagaaccgg 35291433  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 293  Q
    |||||| |||| || | ||||||||||  ||||||||||||||||| |   ||||  ||| |||||| |||||||||| | ||| ||||||||    
T  35291432 accacttattactggaggaaattttggtgattttggagtgtagattgc---ttgtgtaatcagggtttcaattttatacaattggggaagaaa 35291343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 40330018 - 40330296
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||||||||||||||||||| ||||  || ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| |||||||||||| |||    
T  40330018 aagcactctcacatcaccattaaacttggaaattgaagatgaagctcgactttcataactattttttcccatatttccaccccccatcatttcagaatca 40330117  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgt 199  Q
    | || || | |||||||| ||||||||||   |||||||  ||||  |||||||        | ||||||||| ||| || ||||||||||||||| |      
T  40330118 atttcaatagttttgcttcaagaaattttcaagattttggctttcatattcaatacggaaaaaattagggtttcaagtttgttgaattggggaagagctg 40330217  T
Q  200 taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 278  Q
     |||||| ||||||| | |||||||| |  ||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  40330218 gaccacttattattggaggaaatttttgtgattttggagtgtagattgcatattgtgtaattagggttccaattttata 40330296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 163 - 295
Target Start/End: Complemental strand, 1343614 - 1343482
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    ||||||||||| || ||||| |||||||||| |||||||||||||| ||||| ||||||||||||  |||||||||||||| ||| | ||| ||||||||    
T  1343614 attagggtttggagttttttaaattggggaaaaacgttaccactaactattggaagaaattttggagattttggagtgtagtttaaagattataaaatta 1343515  T
Q  263 gggttccaattttatatatttgaggaagaaaga 295  Q
    ||||  |||||||||||||||  ||||||||||    
T  1343514 gggtgtcaattttatatatttagggaagaaaga 1343482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 63 - 293
Target Start/End: Original strand, 27350095 - 27350322
Alignment:
Q  63 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 161  Q
    |||||||| |||||||||||| |||||||||  |||||| |  |||| ||||| ||||||||||||||| ||||||   |||| |||||||||           
T  27350095 ttttgcccatacacccacccc-catcatttcttattcaattacaacagttttgtttgaagaaattttggggatttttttattttggattcaataaaaaa- 27350192  T
Q  162 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 261  Q
     | |||||||||| | | ||| ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||||  |||| | ||| |||||||    
T  27350193 -aatagggtttgaggttatttcaattggggatgaacgttac-actaattattgaaagaatttttgggaattttggcgtgtgaattaaagattataaaatt 27350290  T
Q  262 agggttccaattttatatatttgaggaagaaa 293  Q
    ||||||||||||||||| ||||| | ||||||    
T  27350291 agggttccaattttatacatttgggaaagaaa 27350322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 32089425 - 32089725
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt--cag-at 97  Q
    ||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | |||| ||| ||  |||||||| ||||||||   || ||    
T  32089425 aagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccgttttttcccatattcccaccccacatcattttgaagtat 32089524  T
Q  98 tcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaattggggaagaa 196  Q
    |||| || || | |||||||| |||||||||||  |||||||  |||| |||||| |         |||||||||||||| |||||||||||||| ||||    
T  32089525 tcaatttcaatagttttgcttcaagaaattttgaggattttggctttcagattcactacgaaaaaaattagggtttgaagttttttgaattggggcagaa 32089624  T
Q  197 cgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 296  Q
    |   ||| || ||||||| |  |||||||    ||| | ||||||||||| || |||||  ||||||||||||||||||||| | ||| |||||||||||    
T  32089625 ctgaacctcttattattggagtaaattttcatgattatagagtgtagattgcagattgtgtaattagggttccaattttatacaattggggaagaaagag 32089724  T
Q  297 c 297  Q
    |    
T  32089725 c 32089725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 63 - 297
Target Start/End: Original strand, 6116465 - 6116700
Alignment:
Q  63 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnt 162  Q
    |||||||  |||||||| | | ||||||||| ||||||| |||||||||||||  |||||||||||||| ||||||| |||||  |||||||            
T  6116465 ttttgcctatacacccatcacccatcatttcggattcaatttgaacaattttgaatgaagaaattttggggattttggatttcatattcaatcaaaacaa 6116564  T
Q  163 a--ttagggtttgaagctttttgaattggggaagaac--gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaa 258  Q
    |  ||||||||||||| |||| ||||  ||||||||   |||     |||||| || ||||||||||||| ||||| || ||||||||| | |||| |||    
T  6116565 aaattagggtttgaagtttttagaatcagggaagaaatggttgt---taattaatggaagaaattttggggatttttgactgtagattagagattgaaaa 6116661  T
Q  259 attagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| |||||||||| ||||| ||||||||||||    
T  6116662 attagggtttcaattttatagatttggggaagaaagagc 6116700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 32836462 - 32836186
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| || |||| | | ||  |||||||| ||||||||||||||||    
T  32836462 aagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactgttttttcacatattcccacccc-catcatttcagattca 32836364  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 200  Q
    | || || | |||||||| || |  |||||  |||||||  |||   |||||||        |||||||||||||| |||||||||||||||||||| |     
T  32836363 atttcaatagttttgcttcaaaattttttgaggattttggcttttaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaacttg 32836264  T
Q  201 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 278  Q
    |||| | ||  ||| | || |||||||  |||||  |||||| ||| || |||||  ||||||||||||||| |||||    
T  32836263 accatttatatttggaggatattttggtgattttatagtgtaaattgcagattgtgtaattagggttccaatgttata 32836186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 43317315 - 43317176
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| || ||||  || ||  |||||||| ||||||||||||| ||    
T  43317315 aagcactctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgtttttttccatattcccaccccccatcatttcagatcca 43317216  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttga 140  Q
    | || |  | |||||||| |||||||||||  ||||||||    
T  43317215 atttcactagttttgcttcaagaaattttgaggattttga 43317176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 18623899 - 18623765
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||  ||| ||| ||||    
T  18623899 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgtaagaaattttggggattttgaactctaggtgacgaattataacatta 18623800  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| |||||||||||| ||||||||||||    
T  18623799 gggttccaaatttatatatttggggaagaaagagc 18623765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 18341607 - 18341745
Alignment:
Q  1 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 100  Q
    ||||| ||| |||||||| |||||||| ||| || | ||| |||||  | ||| | || || |||||||| |||  ||||| | ||||||||||||||||    
T  18341607 aagcattcttacatcaccgttaaacatagagtttgaggatgaagctcaagtttgagaactgtttttgcccatacgaccaccacccatcatttcagattca 18341706  T
Q  101 aattgaacaattttgcttgaagaaattttggtgattttg 139  Q
    |  |||||||||||| ||||||||||||||| |||||||    
T  18341707 atctgaacaattttgattgaagaaattttggggattttg 18341745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 32134690 - 32134556
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  32134690 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactataggtgacaaattataacatta 32134591  T
Q  263 gggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| ||||||||||||  |||||||||||    
T  32134590 gggttccaaatttatatatttgtagaagaaagagc 32134556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 278
Target Start/End: Original strand, 35400226 - 35400489
Alignment:
Q  15 caccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaatttt 114  Q
    ||||||||||| ||||| || ||||| || ||||||||||| ||    |||| ||| ||  |||||||| ||||||||||||||||| || || | ||||    
T  35400226 caccattaaacttggagtttgaagatgaaacttgactttcaaaacctttttttcccatattcccaccccccatcatttcagattcaatttcaatagtttt 35400325  T
Q  115 gcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattattg 214  Q
    |||| |||||||||||  |||||||  |||| || ||| |        | |  ||||||||| ||||| |||||||  ||||    |||||| |||||||    
T  35400326 gcttcaagaaattttgaggattttggctttcagactcactacgaaaaaaattaggtttgaagttttttaaattgggacagaattggaccacttattattg 35400425  T
Q  215 aaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 278  Q
     | ||||||||   |||| | ||||||||||| ||||||||  |||||||||||||||||||||    
T  35400426 gaggaaattttcataattatagagtgtagattgcatattgtgtaattagggttccaattttata 35400489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 34328466 - 34328600
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttggga-attttggagtgtagattacatattgtaaaatt 261  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||||||||||||  |||||| | | |||   ||| ||| ||| |||    
T  34328466 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaattttgggggattttgaactctaggcgacaaattataatatt 34328565  T
Q  262 agggttccaattttatatatttgaggaagaaagag 296  Q
    |||||||||| |||||||||||| |||||||||||    
T  34328566 agggttccaaatttatatatttggggaagaaagag 34328600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 12738337 - 12738470
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  12738337 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 12738436  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||| ||||||| |||  |||||||||||    
T  12738437 gggttccaaatttatatgtttagggaagaaagag 12738470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 12801160 - 12801293
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  12801160 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 12801259  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||| ||||||| |||  |||||||||||    
T  12801260 gggttccaaatttatatgtttagggaagaaagag 12801293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 27077123 - 27077256
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||| ||||||| |||||||||||||||||||||||  ||  ||||| || |||||||||| |  |||||| | | |   | ||| ||| ||||||||    
T  27077123 attaggttttgaagttttttgaattggggaagaacgttgtcatcaattaatggaagaaattttagagattttgaactctcagtgacaaattataaaatta 27077222  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    |||||||||| ||||  ||||| |||||||||||    
T  27077223 gggttccaatgttatggatttggggaagaaagag 27077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 33257426 - 33257559
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||||||| |||||||||||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||| ||| || |||||  ||| |    
T  33257426 attagggtttgaagttttttgaattggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtatattgcagattgtgtaatca 33257525  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||| |||||||||| | ||| |||||||||||    
T  33257526 gggttacaattttatacaattggggaagaaagag 33257559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 284
Target Start/End: Complemental strand, 41494285 - 41494167
Alignment:
Q  166 agggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattaggg 265  Q
    ||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||| |||    
T  41494285 agggttttaagttttttgaattggggaagaactttgtcatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacattcggg 41494186  T
Q  266 ttccaattttatatatttg 284  Q
    |||||| ||||||||||||    
T  41494185 ttccaaatttatatatttg 41494167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 30464344 - 30464263
Alignment:
Q  216 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||||||||| ||||||||||||    
T  30464344 aagaaatttgggggattttgaactctaggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagc 30464263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 28035852 - 28035772
Alignment:
Q  216 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 296  Q
    |||||||||||| ||||||  | |||| |||| | |||| ||| ||| |||| ||||||||||||| ||||||||||||||    
T  28035852 aagaaattttggaaattttaaactgtaaattagagattgaaaagttaaggtttcaattttatatatctgaggaagaaagag 28035772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 297
Target Start/End: Original strand, 28821770 - 28821860
Alignment:
Q  207 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||| || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||||||| ||| |||||||||||| ||||||||||||    
T  28821770 aattaatggaagaaatttgggggattttgaactctaggtgacaaattataacattagggtttcaaatttatatatttggggaagaaagagc 28821860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 293
Target Start/End: Complemental strand, 29620529 - 29620495
Alignment:
Q  259 attagggttccaattttatatatttgaggaagaaa 293  Q
    ||||||||||||| |||||||||||||||||||||    
T  29620529 attagggttccaaatttatatatttgaggaagaaa 29620495  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 8541036 - 8541072
Alignment:
Q  259 attagggttccaattttatatatttgaggaagaaaga 295  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  8541036 attagggttccaaatttatatatttggggaagaaaga 8541072  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 19998149 - 19998229
Alignment:
Q  216 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 296  Q
    ||||||||||| |||||||  | | ||| | ||| ||| ||||||||||||| | |||||||| ||||| |||||||||||    
T  19998149 aagaaattttgagaattttaaactctaggtgacaaattataaaattagggtttccattttatagatttggggaagaaagag 19998229  T

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Target: scaffold0006 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 63 - 291
Target Start/End: Original strand, 37856 - 38082
Alignment:
Q  63 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 161  Q
    |||||||| ||||||||||| |||||||||||||||||| |  |||| ||||| |||||| |||||||| ||||||   ||||||||||||||           
T  37856 ttttgcccatacacccaccc-tcatcatttcagattcaattacaacagttttgtttgaaggaattttggggattttttgatttcggattcaatcaaaaa- 37953  T
Q  162 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 261  Q
     |||||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||    
T  37954 -attagggtttgaggttatttcaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatt 38052  T
Q  262 agggttccaattttatatatttgaggaaga 291  Q
    ||||||||||||||||| ||||| ||||||    
T  38053 agggttccaattttatacatttggggaaga 38082  T

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Target: scaffold0070 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 76 - 297
Target Start/End: Complemental strand, 57890 - 57669
Alignment:
Q  76 cccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaa 175  Q
    |||||||||||| ||||| ||||||| || || | |||||||  ||||||||||   ||||||| ||||| ||||||||        || ||||||||||    
T  57890 cccacccctcatgatttcggattcaatttcaatagttttgctgaaagaaattttttggattttggatttcagattcaataaaaaaaaat-agggtttgaa 57792  T
Q  176 gctttttgaattgg-ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattt 274  Q
    | |||||||||| | ||||||| ||||||||| ||||||  ||||||||||||  |||||||||||||||||||| || ||| ||| |||||| ||||||    
T  57791 gttttttgaattagaggaagaatgttaccacttattattcgaagaaattttggttattttggagtgtagattacagatagtataatcagggtttcaattt 57692  T
Q  275 tatatatttgaggaagaaagagc 297  Q
    |||||||||| ||||||||||||    
T  57691 tatatatttggggaagaaagagc 57669  T

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Target: scaffold1041 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 2643 - 2710
Alignment:
Q  230 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||| ||||||||||||    
T  2643 attttggagtgtagattacatatagtataattagagttccagttttatatatttggggaagaaagagc 2710  T

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Target: scaffold1041; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 2423 - 2356
Alignment:
Q  230 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 297  Q
    |||||||||||||||||||  || ||| ||| ||||||||||||||||||||||| ||||||||||||    
T  2423 attttggagtgtagattactgatagtataatgagggttccaattttatatatttggggaagaaagagc 2356  T

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Target: scaffold0722 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 297
Target Start/End: Complemental strand, 4574 - 4446
Alignment:
Q  168 ggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggtt 267  Q
    ||||||||| |||| | |||| |||||||||||  ||  ||||| || ||||| ||||||  |||||  | | ||||| ||| ||||||||||||| |||    
T  4574 ggtttgaagtttttagcattgaggaagaacgttgtcatcaattaatggaagaa-ttttggagattttaaactctagatgacaaattgtaaaattagagtt 4476  T
Q  268 ccaattttatatatttgaggaagaaagagc 297  Q
    ||||||||||| ||||||| ||||||||||    
T  4475 ccaattttatagatttgagaaagaaagagc 4446  T

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Target: scaffold0564 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 296
Target Start/End: Original strand, 9533 - 9666
Alignment:
Q  163 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 262  Q
    |||||||||| ||| |||||||||||||||| ||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  9533 attagggttttaagttttttgaattggggaaaaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 9632  T
Q  263 gggttccaattttatatatttgaggaagaaagag 296  Q
    ||||| ||| |||||||||||| |||||||||||    
T  9633 gggtttcaaatttatatatttggggaagaaagag 9666  T

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Target: scaffold0345 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 297
Target Start/End: Original strand, 1164 - 1283
Alignment:
Q  178 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 277  Q
    |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||    
T  1164 tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtaacaaattataacattagggttccaaatttat 1263  T
Q  278 atatttgaggaagaaagagc 297  Q
    ||||||| ||||||||||||    
T  1264 atatttggggaagaaagagc 1283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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