View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10215_high_10 (Length: 267)
Name: NF10215_high_10
Description: NF10215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10215_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 8927181 - 8927427
Alignment:
| Q |
1 |
ttaaaaagaatcatggtcaagtgcagatacacttgagacgctacttcaatgtgctgagttcgaattccctaaagaccattgtaaaatggtcgtaccactt |
100 |
Q |
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| T |
8927181 |
ttaaaaagaatcatggtcaagtgcagatacacttgagacgctacttcaatgtgctgagttcgaattccctaaagaccattgtaaaatggtcgtaccactt |
8927280 |
T |
|
| Q |
101 |
tattaataaaaattcatcatttttggtcgaatcatggatcagataccgagnnnnnnnnnnnnnnnnnntgttgaaaggaagctgatgcattttaaatctc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |
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| T |
8927281 |
tattaataaaaattcatcatttttggtcgaatcatggatcagataccgag--ttttttaaaaaaaaaatgttgaaaggaagctgatgcattttaaatcgc |
8927378 |
T |
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| Q |
201 |
acctttttacttaaaacatcgcatgtgcacatagccacatactctacta |
249 |
Q |
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||||||||||||||||||||||||| |||||||||||| |||||||||| |
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| T |
8927379 |
acctttttacttaaaacatcgcatgggcacatagccacttactctacta |
8927427 |
T |
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