View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10215_low_11 (Length: 255)
Name: NF10215_low_11
Description: NF10215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10215_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 12692285 - 12692512
Alignment:
| Q |
18 |
atacctacaactgacaaagaaaccaatgtaaagaacaccgacgagatcgacaaacacttgttaactcagtcactatatcaacgtccatgtgatgtgtcca |
117 |
Q |
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| T |
12692285 |
atacctacaactgacaaagaaaccaatgtaaagaacaccgacgagatcgacaaacacttgttaactcagtcactatatcaacgtccatgtgatgcgtcca |
12692384 |
T |
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| Q |
118 |
tgagacactgaacgtcttcgacattgttgattctagatatgactaagatgggttgcctcgagcaaaaaattcttgtatagtactcttctgcaatgaagga |
217 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12692385 |
tgagacactgaacgtcttcgacattgttgattctggatatgactaagatgggttgcctcgagcaaaaaattcttgtatagtactcttctgcaatgaagga |
12692484 |
T |
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| Q |
218 |
aaccaacggttatgacctccccttcatc |
245 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
12692485 |
aaccaacggttatgacctccccttcatc |
12692512 |
T |
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