View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10215_low_16 (Length: 227)
Name: NF10215_low_16
Description: NF10215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10215_low_16 |
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Alignment Details
Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 8072808 - 8072612
Alignment:
| Q |
17 |
atcatttgtgttctggtgtgcattttatttatttgttttctttagaaccaaatatgctgatctaacatattgaataccttcttggtcgccaagagttctt |
116 |
Q |
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| T |
8072808 |
atcatttgtgttcttgtgtgcattttatttatttgttttctttagaaccaaatatgctgatctaacatattgaataccttcttggtcgccaagagttctt |
8072709 |
T |
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| Q |
117 |
tttccaataaatcagctcgattaatagtattatgtagcatttcctccttctcaggtggcattacaacaggctgatgattaatgtttgtcattctctg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
8072708 |
tttccaataaatcagctcgattaatagtattatgtagcatttcctccttctcaggtggcattacaacaggctgatgattaatgtttgtcattttctg |
8072612 |
T |
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