View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10216_low_15 (Length: 241)
Name: NF10216_low_15
Description: NF10216
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10216_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 24329526 - 24329757
Alignment:
| Q |
1 |
ttcgagttgaattaattcaaatttaaagttatcctttggagagtttttgctacaaatttagagtagtggtgaaaaattccacaatgacatcaataatac- |
99 |
Q |
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| T |
24329526 |
ttcgagttgaattaattcaaatttaaagttatcctttggagagtttttgctacaaatttagagtagtggtgaaaaattccacaatgactccaataatacg |
24329625 |
T |
|
| Q |
100 |
-------gcgacaatgacgactgaaatagataaattctacattgttgtaagagcaaacatacaagtg-attaaagcttatattttgatccaaagtcttaa |
191 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || |||||||| ||||||| ||| |
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| T |
24329626 |
aagcaatgcgacaatgacaactgaaatagataaattctacattgttgtaagagcaaccatacaagtgaattaaacctcgtattttgacccaaagttctaa |
24329725 |
T |
|
| Q |
192 |
ttaaactattagacatgtgaatcatcgtattc |
223 |
Q |
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||||| |||||| ||||||||||||||||||| |
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| T |
24329726 |
ttaaattattaggcatgtgaatcatcgtattc |
24329757 |
T |
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