View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10216_low_16 (Length: 227)
Name: NF10216_low_16
Description: NF10216
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10216_low_16 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 24329180 - 24329406
Alignment:
| Q |
1 |
tggttgtgtcccctacaaaaaagctttgatacagtgagaatgagctttctcctcgtgcttctttaagattttgtcattttttaattgaaaacaacaactg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
24329180 |
tggttgtgtcccctacaaaaaagctttgatacagtgagaatgagctttctcctcgtgcttctttaagattttgtcattttctaattgaaaacaacaacta |
24329279 |
T |
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| Q |
101 |
aaattctcaatgtctcaatattttctgaatatgaacagaatgtcagaaccttaataattccaaaacaatgataaaatttaccgcggttatttgttacata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
24329280 |
aaattctcaatgtctcaatattttctgaatatgaacagaatgtcagaaccttaataattccaaaacaatgattaaatttaccgcggttatttgttacata |
24329379 |
T |
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| Q |
201 |
atcataaataataatcatgtttgtaaa |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
24329380 |
atcataaataataatcatgtttgtaaa |
24329406 |
T |
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