View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10218_low_20 (Length: 252)
Name: NF10218_low_20
Description: NF10218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10218_low_20 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 252
Target Start/End: Complemental strand, 31044010 - 31043769
Alignment:
| Q |
11 |
gagatgaagtcaccaaagtcattaaattcaaagtcatcgaaatgtaaccccaattataactccggaaattgttagcattagtaaggctcatttcaatgct |
110 |
Q |
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| T |
31044010 |
gagataaagtcaccaaaattactaaattcaaagtcaccgaaatttaaccccgattataacttcggaaattgttagcattagtaaggctcatttcaatgct |
31043911 |
T |
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| Q |
111 |
aagaccagacaaacccttgttttaggtcctcaacaccccaacccaactcccaacatagctcattaattttataacatctattttgatacttatattgcac |
210 |
Q |
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| T |
31043910 |
aagaccagacaaacccttgttttaggtcctcaacaccccaacccaactcccaacatagctcattaattttataacatctattttgatacttatattgcac |
31043811 |
T |
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| Q |
211 |
acggcacctcttcttatgacttgtttaaaatgagatagatct |
252 |
Q |
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| T |
31043810 |
atggcaactcttcttacgacttgtttaatatgagatagatct |
31043769 |
T |
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