View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10218_low_31 (Length: 211)
Name: NF10218_low_31
Description: NF10218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10218_low_31 |
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Alignment Details
Target: chr1 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 26524731 - 26524553
Alignment:
| Q |
18 |
aggaagaggaggcactcctttcaagagcaaaacgaaaaggactttcacagaaaaatccatgaggatcaaaacaagcacaatctacattttctttcttctt |
117 |
Q |
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| T |
26524731 |
aggaagaggaggcactcctttcaagagcaaaacgaaaagggctttcacagaaaaatccatgaggatcaaaacaagcacaatctacattttctttcttctt |
26524632 |
T |
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| Q |
118 |
gctcatcacaaactcaacctcttcaacagattcacaagaatgaccactacttgaagtttccatatccaaagatttatct |
196 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26524631 |
gctcatcacaaactcaacctcttcaacagattcacaagaatgaccactacttgaagtttccatatccaaagatttatct |
26524553 |
T |
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