View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10219_high_13 (Length: 308)
Name: NF10219_high_13
Description: NF10219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10219_high_13 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 275; Significance: 1e-154; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 20 - 298
Target Start/End: Complemental strand, 16662557 - 16662279
Alignment:
| Q |
20 |
aacgtctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatg |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16662557 |
aacgtctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatg |
16662458 |
T |
|
| Q |
120 |
ctcttgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacacccc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16662457 |
ctcttgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacacccc |
16662358 |
T |
|
| Q |
220 |
ccttgtccatctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttcttc |
298 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
16662357 |
ccttgtccatctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggcccatattgatttcttc |
16662279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 30 - 298
Target Start/End: Original strand, 14703021 - 14703289
Alignment:
| Q |
30 |
agcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcaca |
129 |
Q |
| |
|
|||||||| || ||||||| ||| | | |||||||||||| |||||| || ||||||||||||||||| ||||| ||||||||||| ||||| ||||||| |
|
|
| T |
14703021 |
agcaccaacttcggaacattcttgacgtcttcactcaacaaagcagcctgaacagctgccccataagctacagcttcatcagggttaatgctgttgcaca |
14703120 |
T |
|
| Q |
130 |
actccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtccat |
229 |
Q |
| |
|
|||||||||| | ||| |||| | ||||||| ||| ||||| ||||||| ||| || || ||||||||||||| ||||| ||| | | ||||||||| |
|
|
| T |
14703121 |
actccttcccctggaaaaagtcctgtaataattgctgtactttgggaatccgagaagacccaccgacaagaacaacatcatctactctactcttgtccat |
14703220 |
T |
|
| Q |
230 |
ctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttcttc |
298 |
Q |
| |
|
||| | ||| | || |||||||||||||||||||| |||||| ||||||| ||||||||| |||||||| |
|
|
| T |
14703221 |
cttagcatcaataagacaactctcaacaatcttcacacactcattaaaaaagtccatattcatttcttc |
14703289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 32 - 268
Target Start/End: Original strand, 11999023 - 11999258
Alignment:
| Q |
32 |
caccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaac |
131 |
Q |
| |
|
|||||| |||||||||| ||||| |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
11999023 |
caccaaatttggaacattcttaacatcttcactcaacaaagcagcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaac |
11999122 |
T |
|
| Q |
132 |
tccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtccatct |
231 |
Q |
| |
|
|||||||| ||||| |||| | | |||| | || || ||||| |||||||| || || || ||||| |||| ||||| || | | ||||||||||| |
|
|
| T |
11999123 |
tccttcccgttgaaaaagtcatgtaatagctgttggac-tttgggatcctagaagatccaccaacaagtacaacatcatctatagtactcttgtccatct |
11999221 |
T |
|
| Q |
232 |
ttgaatccacaaaacaactctcaacaatcttcataca |
268 |
Q |
| |
|
||| ||||| || ||||||||||||| |||| ||||| |
|
|
| T |
11999222 |
ttgcatccataatacaactctcaacagtctttataca |
11999258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 32 - 268
Target Start/End: Complemental strand, 12245959 - 12245723
Alignment:
| Q |
32 |
caccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaac |
131 |
Q |
| |
|
|||||| |||||||||| ||||| ||| |||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
12245959 |
caccaaatttggaacattcttaacatctttactcaacaaagcagcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaat |
12245860 |
T |
|
| Q |
132 |
tccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtccatct |
231 |
Q |
| |
|
|||||||| ||||| |||| | |||| | || ||||| ||||||||||| || || || ||||| |||| ||||| || | | ||||||||||| |
|
|
| T |
12245859 |
tccttcccgttgaaaaagtcctgtaatagctgttggactttgggaatcctagaagatccaccaacaagtacaaaatcatctatagtactcttgtccatct |
12245760 |
T |
|
| Q |
232 |
ttgaatccacaaaacaactctcaacaatcttcataca |
268 |
Q |
| |
|
||| ||||| || ||||||||||||| |||| ||||| |
|
|
| T |
12245759 |
ttgcatccataatacaactctcaacagtctttataca |
12245723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 295
Target Start/End: Complemental strand, 16658070 - 16657807
Alignment:
| Q |
32 |
caccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaac |
131 |
Q |
| |
|
|||||| | ||| |||| ||||| |||||||||||| | ||||||||| |||||||| || ||||||||||| ||||| |||||||| || ||||| || |
|
|
| T |
16658070 |
caccaaatctgggacattcttaaagccttcactcaaaatagcagcttgaacagctgcaccgtaagcaacagcttcatccgggttgatacttttgcataaa |
16657971 |
T |
|
| Q |
132 |
tccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtccatct |
231 |
Q |
| |
|
||||| || ||||| |||| |||||| ||||||||||| ||||||||||| ||||| || |||||||||| |||| | | | || ||| ||||| |
|
|
| T |
16657970 |
tccttgcccttgaaaaagtcttgcaatagatcctgcactttgggaatcctagatgagccacccacaagaacaacgtcatcaatatcaccaatgtgcatct |
16657871 |
T |
|
| Q |
232 |
ttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
||||||| || |||| |||||||| | ||||||||||| || ||||| |||||||| ||||| |
|
|
| T |
16657870 |
ttgaatcacgaagacaattctcaacagttttcatacactcattgaaaagatccatattaatttc |
16657807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 295
Target Start/End: Original strand, 43625019 - 43625290
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctct |
123 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||| |||||| | |||||| || |||||||| |||||||||||||||||||||||||| ||||| | |
|
|
| T |
43625019 |
tctcgcagcaccaattttggaacattcttaatgcctttactcaaaatagcagcctggacagctgcaccataagcaacagcctcatcagggtttatgcttt |
43625118 |
T |
|
| Q |
124 |
tgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacacccccctt |
223 |
Q |
| |
|
||| | |||||||| ||||| || | |||| | | | ||||||||||| ||||| ||||| || ||||| |||| ||| || | | | | ||| |
|
|
| T |
43625119 |
cgcatgattccttccccttgaaaaactcctgcaacagctgttttacttttggaattctagaggagccgccaacaaggacaacatcgtggatagcactctt |
43625218 |
T |
|
| Q |
224 |
gtccatctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
||||| ||| | ||| | || |||||||| |||| | |||| ||||||||| ||||| |||||||| ||||| |
|
|
| T |
43625219 |
gtccaacttggcatcaataagacaactcttaacagttttcaaacactcgttgaaaagatccatatttatttc |
43625290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 7541837 - 7541959
Alignment:
| Q |
28 |
gcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgca |
127 |
Q |
| |
|
|||||||||| |||||| | | ||||| |||| ||||||||| ||||| || |||||||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
7541837 |
gcagcaccaactttggagcgttcttaacgcctccactcaacaatgcagcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgca |
7541936 |
T |
|
| Q |
128 |
caactccttcccattgaagaagt |
150 |
Q |
| |
|
||| ||||| |||||||| |||| |
|
|
| T |
7541937 |
caagtcctttccattgaaaaagt |
7541959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 81 - 295
Target Start/End: Original strand, 12234354 - 12234567
Alignment:
| Q |
81 |
acagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcc |
180 |
Q |
| |
|
||||||||| |||||||||| ||||| |||||||| || |||||||||| ||||||||| ||||| || | |||||| || ||||||||| ||||||| |
|
|
| T |
12234354 |
acagctgcctcataagcaaccgcctc-tcagggttaatactcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttgggaatcc |
12234452 |
T |
|
| Q |
181 |
tagacgagcccccgacaagaacaatatcatgtacaccccccttgtccatctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaag |
280 |
Q |
| |
|
|||| || || || | ||| |||| |||| || | | ||||||||||| | ||| || ||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
12234453 |
tagaggacccgccaataaggacaacttcatccaccctacttttgtccatcttagcatcactaagacaactctcaacaatcttcatacactcaataagaag |
12234552 |
T |
|
| Q |
281 |
gtccatattgatttc |
295 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
12234553 |
atccatattcatttc |
12234567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 295
Target Start/End: Complemental strand, 12259138 - 12258871
Alignment:
| Q |
28 |
gcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgca |
127 |
Q |
| |
|
||||| |||| |||||||||| || || ||||||| |||| |||||| || | ||| |||||| |||| |||||||||||||| || ||||||||||| |
|
|
| T |
12259138 |
gcagctccaactttggaacattctggatatcttcacttaacaaagcagcctgaatagccgccccaaaagctacagcctcatcaggattaatgctcttgca |
12259039 |
T |
|
| Q |
128 |
caactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtcc |
227 |
Q |
| |
|
|||||| ||||| ||||| || | | |||| | ||||||||| |||||||||| || || || ||||| |||| ||||| |||| | ||||||| |
|
|
| T |
12259038 |
caactctttccccttgaaaaaatcctgtaatagctgctgcactttgagaatcctagaagacccacctacaaggacaacatcatctacattactcttgtcc |
12258939 |
T |
|
| Q |
228 |
atctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
| || | |||| || ||||||||||||| ||||||| || || || ||||| |||| ||| ||||| |
|
|
| T |
12258938 |
gtgttagcatccgtaagacaactctcaacagtcttcatgcattcattgaaaagttccaaatttatttc |
12258871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 7542062 - 7542098
Alignment:
| Q |
253 |
caacaatcttcatacactcgttaaaaaggtccatatt |
289 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
7542062 |
caacaatcgtcatacactcgttaaaaagatccatatt |
7542098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 295
Target Start/End: Original strand, 30774859 - 30775130
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctct |
123 |
Q |
| |
|
|||||||||||||| ||||| ||| |||||||||||||||||| | |||||| || ||||||||||| | |||||| ||||||||||| |||||||||| |
|
|
| T |
30774859 |
tctcgcagcaccaactttggggcattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagcaactgcctcatcaggattgatgctct |
30774958 |
T |
|
| Q |
124 |
tgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacacccccctt |
223 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||| |||||||||||| ||||||||||| || || ||||||||||||||||||| ||||| | ||| |
|
|
| T |
30774959 |
tgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactactctt |
30775058 |
T |
|
| Q |
224 |
gtccatctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
||| | ||||||||| || ||||||||||||| ||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
30775059 |
gtctacctttgaatcagtaagacaactctcaacagtctgtatacactcattaaaaaggtccatattgatttc |
30775130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 32 - 283
Target Start/End: Original strand, 35132071 - 35132323
Alignment:
| Q |
32 |
caccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaac |
131 |
Q |
| |
|
|||||| |||||||||| || ||||||| |||||||| |||||| || || |||||||||||||| ||||||||||| ||||| ||||||||||||||| |
|
|
| T |
35132071 |
caccaactttggaacattttttatgcctttactcaacaaagcagcctgaactgctgccccataagctacagcctcatcggggttaatgctcttgcacaac |
35132170 |
T |
|
| Q |
132 |
tccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacac-cccccttgtccatc |
230 |
Q |
| |
|
|||||||| ||||| ||||| |||||| | ||||||||| ||||||||||| || || || |||||||||| ||||| ||| | | |||||||||| |
|
|
| T |
35132171 |
tccttccctttgaaaaagttttgcaatagctgctgcactttgggaatcctagaagaccctccaacaagaacaacatcatctacccttgctcttgtccatc |
35132270 |
T |
|
| Q |
231 |
tttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtc |
283 |
Q |
| |
|
|| | ||| | | ||||||||| || | ||||||||||| ||||||||||| |
|
|
| T |
35132271 |
ttagcatcaatgagacaactctctacggtattcatacactcattaaaaaggtc |
35132323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 210
Target Start/End: Complemental strand, 9336452 - 9336266
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctct |
123 |
Q |
| |
|
||||| ||||||||||| || ||| ||||| |||||||||||| | ||||||||| |||||||| |||||||||||||||||||| |||||||| | | |
|
|
| T |
9336452 |
tctcgtagcaccaagttgggcgcattcttaaagccttcactcaaaatagcagcttgaacagctgcaccataagcaacagcctcatctgggttgataccca |
9336353 |
T |
|
| Q |
124 |
tgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcat |
210 |
Q |
| |
|
|| | || |||||||| ||||| || | |||||| ||| |||||||| ||||||||||||||||| || |||||||||||||||| |
|
|
| T |
9336352 |
tgaataattccttccccttgaaaaattctagcaatagttcttgcactttcggaatcctagacgagccacccacaagaacaatatcat |
9336266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 148
Target Start/End: Complemental strand, 23597099 - 23597022
Alignment:
| Q |
71 |
agcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaa |
148 |
Q |
| |
|
||||||||| || || || ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| |
|
|
| T |
23597099 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaa |
23597022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 23588257 - 23588170
Alignment:
| Q |
61 |
cactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaa |
148 |
Q |
| |
|
||||||| | ||||||||| || ||||||||||| |||||||| ||||| |||||||||||||| || | |||||| ||||||||||| |
|
|
| T |
23588257 |
cactcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaa |
23588170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 54396081 - 54396154
Alignment:
| Q |
75 |
gcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaa |
148 |
Q |
| |
|
||||| ||||| || |||||||||||||| ||||||||||| || |||||||| | ||| |||||||||||||| |
|
|
| T |
54396081 |
gcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaa |
54396154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 121; Significance: 5e-62; HSPs: 30)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 24 - 295
Target Start/End: Original strand, 8616285 - 8616559
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcact---caacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgc |
120 |
Q |
| |
|
||||||||| ||||||||||||||| ||||| | || | | ||||| |||||| || || ||||||||| |||||||||||||||||| |||||| |
|
|
| T |
8616285 |
tctcgcagcgccaagtttggaacattcttaaagtctgtagtacccaacaaagcagcctgaactgctgccccactagcaacagcctcatcaggattgatgt |
8616384 |
T |
|
| Q |
121 |
tcttgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccc |
220 |
Q |
| |
|
|||||||||| |||||||||| ||| |||| || ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| | |
|
|
| T |
8616385 |
tcttgcacaaatccttcccatcgaaaaagtcactcaatagttcctgcactttaggaatcctagacgagccaccgacaagaacaatatcatctacactact |
8616484 |
T |
|
| Q |
221 |
cttgtccatctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
||| || ||||| ||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
8616485 |
cttctctatcttagaatcattaaaacaactctcaacagtctttatacactcgttaaaaaggtccatattgatttc |
8616559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 24 - 295
Target Start/End: Complemental strand, 8586267 - 8585996
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctct |
123 |
Q |
| |
|
||||||||||||||||||||||| | ||||| | ||| || || || || ||| || || || |||||| |||||||||||||||||| |||||| ||| |
|
|
| T |
8586267 |
tctcgcagcaccaagtttggaactttcttaaagtctttacacagcaaagaagcctgaactgcagccccactagcaacagcctcatcaggattgatgttct |
8586168 |
T |
|
| Q |
124 |
tgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacacccccctt |
223 |
Q |
| |
|
|||| || || |||||||||||||||| || ||||| |||||| ||||| ||||| || |||||||| |||||||| |||||||| | |||||| ||| |
|
|
| T |
8586167 |
tgcataaatctttcccattgaagaagtcactcaatagttcctgtactttgggaattctggacgagccaccgacaaggacaatatcgtctacaccattctt |
8586068 |
T |
|
| Q |
224 |
gtccatctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
|| ||||| ||||| || ||||||||||||| | || |||||||| ||||||||||||||||||||||| |
|
|
| T |
8586067 |
ctctatcttagaatcggtaagacaactctcaacagtatttatacactcattaaaaaggtccatattgatttc |
8585996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 32 - 295
Target Start/End: Complemental strand, 27831428 - 27831165
Alignment:
| Q |
32 |
caccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaac |
131 |
Q |
| |
|
||||||||||||||||| | ||||| | |||||||||| |||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
27831428 |
caccaagtttggaacattcataatgtcatcactcaacaaagcagcctgcacagctgcaccaaaagcaacagcctcatcaggattgatgctcttgcacaaa |
27831329 |
T |
|
| Q |
132 |
tccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtccatct |
231 |
Q |
| |
|
||||| || ||||| |||| ||||| | ||||||||| |||||||| || ||||| || ||||| |||| ||||| || || | ||||||||||| |
|
|
| T |
27831328 |
tcctttcccttgaaaaagtccgccaatagctgctgcactttgggaatccttgaagagccaccaacaaggacaacatcatctatactactcttgtccatct |
27831229 |
T |
|
| Q |
232 |
ttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
| || || | ||||||||||||| ||| |||||| || || |||||||||||||||||||| |
|
|
| T |
27831228 |
tagagtcagtgagacaactctcaacagtctccatacattcattgaaaaggtccatattgatttc |
27831165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 6789123 - 6789390
Alignment:
| Q |
28 |
gcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgca |
127 |
Q |
| |
|
|||||||||||||||||||| |||| |||||| ||||||| |||||| || |||||||| || |||||||||||||||||||||||||||||| |||| |
|
|
| T |
6789123 |
gcagcaccaagtttggaacactcttagagccttcgctcaacaaagcagcctggacagctgcaccgtaagcaacagcctcatcagggttgatgctcatgca |
6789222 |
T |
|
| Q |
128 |
caactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtcc |
227 |
Q |
| |
|
||| ||||| || |||| | | |||||| || |||||||| ||||| ||||| || || || ||||| |||| ||||| |||| | ||||||| |
|
|
| T |
6789223 |
caaatcctttcccatgaaaacttcttgcaatagttgttgcactttgggaattctagaagacccaccaacaaggacaacatcatttacaatactcttgtcc |
6789322 |
T |
|
| Q |
228 |
atctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
||||| | || |||| |||||||||||| ||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
6789323 |
atcttagcgtcaacaagacaactctcaacggtcttcatacactcattaaaaatatccatattgatttc |
6789390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 295
Target Start/End: Complemental strand, 10494935 - 10494664
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctct |
123 |
Q |
| |
|
||||| ||||||||||| || |||| ||||| |||||||||||| | |||||| || |||||||| |||||||||||||||||||| |||||||| | | |
|
|
| T |
10494935 |
tctcgtagcaccaagttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgca |
10494836 |
T |
|
| Q |
124 |
tgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacacccccctt |
223 |
Q |
| |
|
|| | || |||||||| ||||| || | |||||| ||||||||||| ||||||||||||||||| || |||||||||||||||| | | | ||| |
|
|
| T |
10494835 |
tgaataattccttccccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatcaatatcattctt |
10494736 |
T |
|
| Q |
224 |
gtccatctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
|| |||||||||||| | |||||| |||||||| |||||||||||| | |||| ||| ||||| ||||| |
|
|
| T |
10494735 |
gtatatctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaagtctatattaatttc |
10494664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 32 - 295
Target Start/End: Original strand, 17267554 - 17267817
Alignment:
| Q |
32 |
caccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaac |
131 |
Q |
| |
|
||||||||||||||||| ||| | || | |||| |||| |||||| || ||||| || ||||||||||||||||||||||||||||| || ||||| || |
|
|
| T |
17267554 |
caccaagtttggaacattcttgacgcttccacttaacaaagcagcctgaacagcagcaccataagcaacagcctcatcagggttgatacttttgcataat |
17267653 |
T |
|
| Q |
132 |
tccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtccatct |
231 |
Q |
| |
|
|||||||| ||||||||||| |||||| || ||||||||| ||||||||||| || || || ||||| |||| ||||| || | | |||||| |||| |
|
|
| T |
17267654 |
tccttccccttgaagaagttctgcaatagttgctgcactttcggaatcctagaagacccaccaacaaggacaacatcatcaactctgctcttgtcaatct |
17267753 |
T |
|
| Q |
232 |
ttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
| | ||| || ||| |||||||||||| ||| ||||| | ||||||||||||||||||||| |
|
|
| T |
17267754 |
tagcatcactaagacacttctcaacaatctccatgcactcatcaaaaaggtccatattgatttc |
17267817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 32 - 298
Target Start/End: Original strand, 17259856 - 17260122
Alignment:
| Q |
32 |
caccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaac |
131 |
Q |
| |
|
||||||||||||||||| ||| | || | |||| |||| |||||| || ||||| || |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
17259856 |
caccaagtttggaacattcttgacgcttccacttaacaaagcagcctgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataat |
17259955 |
T |
|
| Q |
132 |
tccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtccatct |
231 |
Q |
| |
|
||||| || |||||||| | |||||| || ||||||||| ||||||||||| || || || ||||| |||| ||||| | | | |||||| |||| |
|
|
| T |
17259956 |
tccttacccttgaagaaatcctgcaatagttgctgcactttcggaatcctagaagatccaccaacaaggacaacatcatcaattctgctcttgtcaatct |
17260055 |
T |
|
| Q |
232 |
ttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttcttc |
298 |
Q |
| |
|
| ||| || ||| |||||||||||| ||| ||||| | |||||||||||||||||||||||| |
|
|
| T |
17260056 |
taccatcactaagacacttctcaacaatctccatgcactcataaaaaaggtccatattgatttcttc |
17260122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 8575941 - 8576054
Alignment:
| Q |
32 |
caccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaac |
131 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||| ||||||||| ||| | || ||||||||||||||||||||||||||||||||||| || || |
|
|
| T |
8575941 |
caccaagtttggaacattcttactgccttcactcaacaaagcagcttggacaacagcaccataagcaacagcctcatcagggttgatgctcttacataat |
8576040 |
T |
|
| Q |
132 |
tccttcccattgaa |
145 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
8576041 |
tccttccccttgaa |
8576054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 32 - 213
Target Start/End: Original strand, 3146879 - 3147060
Alignment:
| Q |
32 |
caccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaac |
131 |
Q |
| |
|
||||||||||||||||| |||| | |||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||| || |||| |
|
|
| T |
3146879 |
caccaagtttggaacatttttaaagtcttcactcaacaaagcagcttgcacagctgcaccataagcaacggcctcatcagggttgatgctgttacacaga |
3146978 |
T |
|
| Q |
132 |
tccttcccattgaagaagttac-gcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgta |
213 |
Q |
| |
|
| |||||| | || || || | |||||| || |||||||||||||| ||||||||||| |||||||| || | |||||||| |
|
|
| T |
3146979 |
tgcttccc-tgcaaaaaattcctgcaatagttgttgcacttttggaattctagacgagccaccgacaaggacgacatcatgta |
3147060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 29578233 - 29578043
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctct |
123 |
Q |
| |
|
||||||| ||||| |||||||||| ||||||||| ||| |||||| |||||| ||||||||||| ||||||||||||||||| |||||||| |||||| |
|
|
| T |
29578233 |
tctcgcaagaccaaatttggaacattcttaatgccatcaatcaacaaagcagcctgcacagctgcaccataagcaacagcctcgtcagggtttatgctca |
29578134 |
T |
|
| Q |
124 |
tgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtac |
214 |
Q |
| |
|
||||||| ||| | || ||||| |||| |||||| || | ||||||| ||||| ||||| || || || ||||| ||||| |||||||| |
|
|
| T |
29578133 |
tgcacaaatccctacccttgaaaaagtcttgcaatagtttccgcactttgggaattctagatgaacctccaacaaggacaatttcatgtac |
29578043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 29582385 - 29582281
Alignment:
| Q |
41 |
tggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttccca |
140 |
Q |
| |
|
|||||||| || |||||||||| ||| || |||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
29582385 |
tggaacattctcaatgccttcaatcagcaaagcagcctgcacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaaatccttcccc |
29582286 |
T |
|
| Q |
141 |
ttgaa |
145 |
Q |
| |
|
||||| |
|
|
| T |
29582285 |
ttgaa |
29582281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 210
Target Start/End: Original strand, 8609524 - 8609710
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctct |
123 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||| ||||| |||||| || ||||| || ||||||||||| ||||||||||||||||||||| |
|
|
| T |
8609524 |
tctcgcagcaccaagtttggaactgatttgatgccttcacccaacaaagcagcctggacagcagcaccataagcaaccgcctcatcagggttgatgctca |
8609623 |
T |
|
| Q |
124 |
tgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcat |
210 |
Q |
| |
|
| ||||| ||||| |||||||| |||| ||| || | || |||||| ||||||||||| || || || |||||||||| ||||| |
|
|
| T |
8609624 |
tacacaaatcctttccattgaaaaagtcttgcagtagctgcttcactttcggaatcctagaagaacctccaacaagaacaacatcat |
8609710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 27846655 - 27846566
Alignment:
| Q |
36 |
aagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttg |
125 |
Q |
| |
|
||||||||||||| ||||||| | |||||||||| |||||| ||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
27846655 |
aagtttggaacattcttaatgtcatcactcaacaaagcagcctgcacagctgctccaaaagcaacagcctcatcagggttgatgctcttg |
27846566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 8545240 - 8545355
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctct |
123 |
Q |
| |
|
||||| ||||||| |||||| |||| |||| || ||||||||| || |||||| || |||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
8545240 |
tctcgtagcaccatgtttgggacattcttattgtcttcactcagcaaagcagcctggacagctgcaccataagcaacagcctcatcagggttaatgctct |
8545339 |
T |
|
| Q |
124 |
tgcacaactccttccc |
139 |
Q |
| |
|
|||| || |||||||| |
|
|
| T |
8545340 |
tgcataattccttccc |
8545355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 24 - 210
Target Start/End: Original strand, 8667026 - 8667212
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctct |
123 |
Q |
| |
|
||||| ||||||||||| || |||| |||| |||||||||||| | |||||| || |||||||| ||||||||||||||||| || |||||||| | | |
|
|
| T |
8667026 |
tctcgtagcaccaagttggggacattcttacagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcgtctgggttgataccca |
8667125 |
T |
|
| Q |
124 |
tgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcat |
210 |
Q |
| |
|
|| | || |||||||| ||||| | | ||||| |||||||||||| ||||||||||||||||| |||||||| |||| ||||| |
|
|
| T |
8667126 |
tgaataattccttccccttgaaatattctagcaattgttcctgcactttgggaatcctagacgagccaccgacaagtacaacatcat |
8667212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 35 - 139
Target Start/End: Original strand, 8581318 - 8581422
Alignment:
| Q |
35 |
caagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactcc |
134 |
Q |
| |
|
||||||||||||| ||||||||||||||| | || |||||| || | ||| || |||||||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
8581318 |
caagtttggaacactcttaatgccttcactaaccaaagcagcctgaatagcagcaccataagcaacagcctcatcagggttgatgctcttgcataattcc |
8581417 |
T |
|
| Q |
135 |
ttccc |
139 |
Q |
| |
|
||||| |
|
|
| T |
8581418 |
ttccc |
8581422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 8537643 - 8537740
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgct |
121 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||| | ||||||| |||||| || ||||| || |||||||||||||| ||||||||||||||||| |
|
|
| T |
8537643 |
tctcgcagcaccaagttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgct |
8537740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 8658974 - 8659241
Alignment:
| Q |
28 |
gcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgca |
127 |
Q |
| |
|
|||||||||||||||| |||| ||||| ||||| || || ||||||||||| | |||||| |||||||||||||||||||| |||||||| |||||| | |
|
|
| T |
8658974 |
gcagcaccaagtttgggacattcttaaagcctttgcttaaaacagcagcttgaagagctgcaccataagcaacagcctcatctgggttgatactcttgta |
8659073 |
T |
|
| Q |
128 |
caactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtcc |
227 |
Q |
| |
|
|| ||||| ||| | || |||||| || |||||||| |||||||||||||| || || |||||||||||||| | | | | | | | | |
|
|
| T |
8659074 |
taaaaccttctttgggaaaaggtcttgcaatagatcttgcactttgggaatcctagacgaaccacccacaagaacaatatcgtcaatatcactcatctgt |
8659173 |
T |
|
| Q |
228 |
atctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
|| |||||||| || ||||||||||||| | ||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
8659174 |
atttttgaatcgctaagacaactctcaacagttttcatacactcattaaaaagatccatattcatttc |
8659241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 211
Target Start/End: Original strand, 8102311 - 8102461
Alignment:
| Q |
61 |
cactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaagttacgcaataa |
160 |
Q |
| |
|
||||||| | ||||||||| ||||| || ||||||||||||||||| || ||||||||||| ||||| | |||||| ||||||||||||| |||| | |
|
|
| T |
8102311 |
cactcaagatagcagcttgaacagcggcaccataagcaacagcctcgtcggggttgatgcttttgcatagctccttaccattgaagaagtcttgcaacag |
8102410 |
T |
|
| Q |
161 |
ttcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatg |
211 |
Q |
| |
|
|| ||| ||||| |||||||||| || || || |||||||||| |||||| |
|
|
| T |
8102411 |
ttgctgaactttgggaatcctagttgaaccaccaacaagaacaacatcatg |
8102461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 13333929 - 13333835
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgat |
118 |
Q |
| |
|
||||| ||||||||||| || ||| ||||| |||||||||||| | |||||| || |||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
13333929 |
tctcgtagcaccaagttcgggacagtcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat |
13333835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 215
Target Start/End: Original strand, 8590251 - 8590436
Alignment:
| Q |
30 |
agcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcaca |
129 |
Q |
| |
|
|||||||| || ||||||| |||||| || |||| | || ||||||||| |||||||| |||||||||||||||||||| || |||||||| ||| | | |
|
|
| T |
8590251 |
agcaccaaattaggaacattcttaatcccatcacaaagcaaagcagcttgaacagctgcaccataagcaacagcctcatctggattgatgctattgtaaa |
8590350 |
T |
|
| Q |
130 |
actccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtaca |
215 |
Q |
| |
|
|||||||| | || |||| |||||| | ||||||||| ||||||||||| || || || ||||| |||| ||||| |||| |
|
|
| T |
8590351 |
gatccttccccataaaaaagtcttgcaatagctgctgcactttgggaatcctagaagaaccaccaacaagtacaacatcatctaca |
8590436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 8646492 - 8646605
Alignment:
| Q |
32 |
caccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaac |
131 |
Q |
| |
|
||||||||||||| ||| ||||| ||| |||| || | |||||| || || ||||| ||||||||||| ||| |||||||||||||||||| ||| || |
|
|
| T |
8646492 |
caccaagtttggagcattcttaaagccatcacataataaagcagcctgaacggctgcgccataagcaacggccacatcagggttgatgctctcgcataat |
8646591 |
T |
|
| Q |
132 |
tccttcccattgaa |
145 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
8646592 |
tccttctcattgaa |
8646605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 295
Target Start/End: Original strand, 8654063 - 8654328
Alignment:
| Q |
30 |
agcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcaca |
129 |
Q |
| |
|
||||||||||| || |||| ||||| | |||||||||| | |||||| || ||||| || ||||| |||| ||||||||| |||||||| || | ||| |
|
|
| T |
8654063 |
agcaccaagttggggacattcttaaagtcttcactcaaaatagcagcctgaacagcagcgccatatgcaatagcctcatctgggttgatattcataaaca |
8654162 |
T |
|
| Q |
130 |
actccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtccat |
229 |
Q |
| |
|
| ||||||| ||||| || | |||||| ||||||||||| ||||||||||||||||| || || || |||| ||||| | | | ||||| || |
|
|
| T |
8654163 |
aagccttccccttgaaaaactctagcaatagatcctgcactttgggaatcctagacgagccacccacgagtacaacatcatcaatatcattcttgtatat |
8654262 |
T |
|
| Q |
230 |
ctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
||||||||| | |||||| |||||||| || |||||||| || |||| ||||||||| ||||| |
|
|
| T |
8654263 |
ctttgaatctctgagacaactgtcaacaatattgatacactcattgaaaaagtccatattaatttc |
8654328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 210
Target Start/End: Complemental strand, 8636844 - 8636718
Alignment:
| Q |
84 |
gctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctag |
183 |
Q |
| |
|
||||| |||||||||||||||||||||| |||||||||||| |||| |||||| | || || | || | |||| || |||||| ||||||||||||| |
|
|
| T |
8636844 |
gctgctccataagcaacagcctcatcagcgttgatgctcttacacagttccttcgccttaaaaatgtcctgtaatagttgctgcacctttggaatcctag |
8636745 |
T |
|
| Q |
184 |
acgagcccccgacaagaacaatatcat |
210 |
Q |
| |
|
| ||||| || ||||| |||| ||||| |
|
|
| T |
8636744 |
aggagccaccaacaaggacaacatcat |
8636718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 215
Target Start/End: Complemental strand, 7878286 - 7878103
Alignment:
| Q |
32 |
caccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaac |
131 |
Q |
| |
|
|||||| || ||||||| |||||| || |||| | || |||||| || |||||||| |||||||||||||| ||||| ||||||||||| |||| | |
|
|
| T |
7878286 |
caccaaattaggaacattcttaataccatcacaaagcagagcagcctgaacagctgcaccataagcaacagcttcatccgggttgatgctactgcaaata |
7878187 |
T |
|
| Q |
132 |
tccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtaca |
215 |
Q |
| |
|
|||||||| || || |||| |||||| | ||||||||| |||||||||| || || || ||||| |||| ||||| |||| |
|
|
| T |
7878186 |
tccttccccttaaaaaagtcctgcaatagctgctgcactttgagaatcctagatgatccaccaacaagtacaacatcatctaca |
7878103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 8569918 - 8570033
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctct |
123 |
Q |
| |
|
||||||| ||||||||||||||| ||||| || |||||| || | |||| || | |||||| || ||||||||||||||||||||||| ||||| | |
|
|
| T |
8569918 |
tctcgcaaaaccaagtttggaacactcttaacgctttcactatgcaaaacagcctgaatagctgcaccgtaagcaacagcctcatcagggttaatgctgt |
8570017 |
T |
|
| Q |
124 |
tgcacaactccttccc |
139 |
Q |
| |
|
|||| || |||||||| |
|
|
| T |
8570018 |
tgcataattccttccc |
8570033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 210
Target Start/End: Original strand, 1301072 - 1301253
Alignment:
| Q |
28 |
gcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgca |
127 |
Q |
| |
|
|||||||||||||||| |||| ||| | |||| || || | ||||||||| | |||||| ||||||||||||||||| || |||||||| |||||| | |
|
|
| T |
1301072 |
gcagcaccaagtttgggacattcttgaatcctttgcttaaaatagcagcttgaatagctgcaccataagcaacagcctcgtc-gggttgatactcttgta |
1301170 |
T |
|
| Q |
128 |
caactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcat |
210 |
Q |
| |
|
|| | ||| | ||| | || |||||| || |||||||| ||||||||||||||||| || |||||||||||||||| |
|
|
| T |
1301171 |
taaaactttctccgggaaaatgtcttgcaatatatcttgcactttgggaatcctagacgagccacccacaagaacaatatcat |
1301253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 8017923 - 8017850
Alignment:
| Q |
75 |
gcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaa |
148 |
Q |
| |
|
||||| ||||| || ||||||||||||||||| || |||||||| |||||||| | ||| || ||||||||||| |
|
|
| T |
8017923 |
gcttgtacagcggcaccataagcaacagcctcgtctgggttgatactcttgcaaagctctttaccattgaagaa |
8017850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 291
Target Start/End: Complemental strand, 8383390 - 8383170
Alignment:
| Q |
71 |
agcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaagttacgcaataattcctgcact |
170 |
Q |
| |
|
|||||||| || ||||| ||||||||||||||||| ||||| || |||||| || | ||||||| |||||| |||| |||||| || |||||| |
|
|
| T |
8383390 |
agcagctttaactgctgcaccataagcaacagcctcgtcaggatttatgctcacacaaaggtccttccaattgaaaaagtgttgcaatagctcttgcact |
8383291 |
T |
|
| Q |
171 |
tttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtccatctttgaatccacaaaacaactctcaacaatcttcatacact |
270 |
Q |
| |
|
|| |||||||| || || || |||| ||||||| ||||| ||||| | ||||| |||||| | ||| || ||| ||||||||| ||| |||||||| |
|
|
| T |
8383290 |
ttgggaatcctcgaagaaccaccgatgagaacaacatcatctacactactcttgttcatcttagcatcagtaagacagctctcaacagtctccatacact |
8383191 |
T |
|
| Q |
271 |
cgttaaaaaggtccatattga |
291 |
Q |
| |
|
| ||| ||||||||||||| |
|
|
| T |
8383190 |
tttcaaataggtccatattga |
8383170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 136
Target Start/End: Original strand, 39985290 - 39985365
Alignment:
| Q |
61 |
cactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactcctt |
136 |
Q |
| |
|
||||||| | |||||| || ||||| || ||||| ||||||||||||||||| || ||||||||||| | |||||| |
|
|
| T |
39985290 |
cactcaagatagcagcctgaacagcagcaccatatgcaacagcctcatcaggatttatgctcttgcatagctcctt |
39985365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 24 - 265
Target Start/End: Complemental strand, 34467349 - 34467108
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctct |
123 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||| |||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||| | |
|
|
| T |
34467349 |
tctcgcagcaccaagtttggaacattgttaaagcctttactcaacaaagcagcttgcacagctgcgacataagcgacagcctcatcagggttgatgctat |
34467250 |
T |
|
| Q |
124 |
tgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacacccccctt |
223 |
Q |
| |
|
|||| | ||||| |||||||| |||| ||||||| | ||||||||| ||||||||||| |||||||||||||| ||| |||||| |||| | | | |
|
|
| T |
34467249 |
tgcatagatccttaccattgaaaaagtcccgcaatagctgctgcactttgggaatcctagaagagcccccgacaaggacagcatcatgcacactactcgt |
34467150 |
T |
|
| Q |
224 |
gtccatctttgaatccacaaaacaactctcaacaatcttcat |
265 |
Q |
| |
|
||||||||| | ||| |||| ||||||| |||||||| |||| |
|
|
| T |
34467149 |
gtccatcttagcatcaacaagacaactcacaacaatcctcat |
34467108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 32 - 298
Target Start/End: Original strand, 15594649 - 15594915
Alignment:
| Q |
32 |
caccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaac |
131 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
15594649 |
caccaagtttggaacatttttaaaaccttcactcaacaaagcagcctggacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaat |
15594748 |
T |
|
| Q |
132 |
tccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtccatct |
231 |
Q |
| |
|
||||| || | ||| || | ||||| || |||||||| ||||||||||| || || || |||| |||||||||| ||||| | ||| | ||||| |
|
|
| T |
15594749 |
tcctttccctcgaaaaaatccttcaatagttgttgcactttgggaatcctagaagacccaccaacaatgacaatatcatttacactactcttattcatct |
15594848 |
T |
|
| Q |
232 |
ttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttcttc |
298 |
Q |
| |
|
| | ||| ||| |||||||||||| ||||||||||| || ||||||| |||||| ||||||||||| |
|
|
| T |
15594849 |
tagcatcatcaagacaactctcaactatcttcatacaatccttaaaaaagtccatgttgatttcttc |
15594915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 295
Target Start/End: Complemental strand, 4679118 - 4678847
Alignment:
| Q |
24 |
tctcgcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctct |
123 |
Q |
| |
|
||||||||||| || || || |||| ||||| ||||| ||||| | ||||||||| | |||||| |||||||||||||||||||| |||||||| |||| |
|
|
| T |
4679118 |
tctcgcagcacaaaattcgggacattcttaaaaccttcgctcaaaatagcagcttggatagctgcaccataagcaacagcctcatctgggttgatactct |
4679019 |
T |
|
| Q |
124 |
tgcacaactccttcccattgaagaagttacgcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacacccccctt |
223 |
Q |
| |
|
||||||| ||||||| || || |||| |||||| ||||||||||| |||||||| || || || || |||||||||| ||||| | | | | |
|
|
| T |
4679018 |
tgcacaaatccttccgcttaaaaaagtcttgcaatagatcctgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatattactccc |
4678919 |
T |
|
| Q |
224 |
gtccatctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
| |||||||||||| || |||||||| |||| | | |||||||||||| |||||||||||||| ||||| |
|
|
| T |
4678918 |
gcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttc |
4678847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 52549503 - 52549395
Alignment:
| Q |
28 |
gcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgca |
127 |
Q |
| |
|
|||||||||| |||||||||| || ||||||||||||||||| ||||| || |||||||| |||||||| ||| |||||||||| || |||| |||||| |
|
|
| T |
52549503 |
gcagcaccaactttggaacattctgaatgccttcactcaacaatgcagcctgaacagctgcgccataagctacaacctcatcaggattaatgcccttgca |
52549404 |
T |
|
| Q |
128 |
caactcctt |
136 |
Q |
| |
|
||||||||| |
|
|
| T |
52549403 |
caactcctt |
52549395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 52549352 - 52549302
Alignment:
| Q |
245 |
acaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
52549352 |
acaactttcaacaatcttcatacactccttaaaaaggtccatattcatttc |
52549302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 43744427 - 43744694
Alignment:
| Q |
28 |
gcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgca |
127 |
Q |
| |
|
||||||||| ||||||||| | |||| |||||||||||||| |||||| ||||||||||| ||| |||||| |||||||||||||| ||| |||| || |
|
|
| T |
43744427 |
gcagcaccacgtttggaacttttttaaagccttcactcaacaaagcagcctgcacagctgcaccaatagcaactgcctcatcagggttaatgttcttaca |
43744526 |
T |
|
| Q |
128 |
caactccttcccattgaagaagttac-gcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtc |
226 |
Q |
| |
|
||| |||||||| | || || || | |||||| || || ||||||||||||||||| ||||| || |||||||||| |||||||| | | | |||||| |
|
|
| T |
43744527 |
caaatccttccc-tgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtc |
43744625 |
T |
|
| Q |
227 |
catctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
|||||| | ||| || ||||||||||||||| |||| ||||||||| || || |||||||||||||| |
|
|
| T |
43744626 |
catcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatttc |
43744694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 54 - 289
Target Start/End: Original strand, 12528141 - 12528376
Alignment:
| Q |
54 |
atgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaagttac |
153 |
Q |
| |
|
|||||||||||||||| |||||| || ||||| || |||||||||||||||||||||||||||||||||||| | |||||||| || ||||| || | |
|
|
| T |
12528141 |
atgccttcactcaacaaagcagcctgaacagcggcaccataagcaacagcctcatcagggttgatgctcttgtataactccttgcccttgaaaaactcct |
12528240 |
T |
|
| Q |
154 |
gcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtccatctttgaatccacaaaacaactctc |
253 |
Q |
| |
|
|||||| | || |||||| ||||||||||||||||| || ||||| |||||||||| ||||| | |||||||||||| | ||| |||||||| || |
|
|
| T |
12528241 |
gcaatagctgcttcactttgggaatcctagacgagccaccaacaagtacaatatcatctacactactcttgtccatcttagcatcggtcaaacaactttc |
12528340 |
T |
|
| Q |
254 |
aacaatcttcatacactcgttaaaaaggtccatatt |
289 |
Q |
| |
|
||| ||| |||||||| | ||| ||||||||||| |
|
|
| T |
12528341 |
aacggtctccatacacttttcaaagaggtccatatt |
12528376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 295
Target Start/End: Original strand, 28219529 - 28219796
Alignment:
| Q |
28 |
gcagcaccaagtttggaacatccttaatgccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgca |
127 |
Q |
| |
|
|||||||||| || ||||| | |||| |||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| |||||||| || |
|
|
| T |
28219529 |
gcagcaccaacttcggaacttttttaaagccttcactcaacaaagcagcctgcacagctgcaccataagcaacagcctcatcagggttaatgctcttaca |
28219628 |
T |
|
| Q |
128 |
caactccttcccattgaagaagttac-gcaataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtc |
226 |
Q |
| |
|
||| |||||||| | || || || | ||| || || || ||||||||||| ||||| ||||| || |||||||||| ||| |||||| ||| |||||| |
|
|
| T |
28219629 |
caattccttccc-tccaaaaaattcctgcagtagttgttgtacttttggaattctagaggagcctccaacaagaacaacatcgtgtacagccctcttgtc |
28219727 |
T |
|
| Q |
227 |
catctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggtccatattgatttc |
295 |
Q |
| |
|
||| || | ||| | ||| ||||||||| | |||| |||||| || ||||| |||||||||||||| |
|
|
| T |
28219728 |
catattggcatcagtgagacacctctcaacagttttcaaacactcattgaaaagatccatattgatttc |
28219796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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