View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10219_low_17 (Length: 307)
Name: NF10219_low_17
Description: NF10219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10219_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 19 - 301
Target Start/End: Original strand, 27569510 - 27569792
Alignment:
| Q |
19 |
agaatgaggaatgtgtcattaagtggaataattgactttgttactggcattgtaattgtgcacttgcctatgaggggaaggtgcctcatctataatatca |
118 |
Q |
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| T |
27569510 |
agaatgaggaatgtgtcattaagtggaataattgactttgttactggcattgtaattgtgcacttgcctatgaggggaaggtgcctcatctataatatca |
27569609 |
T |
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| Q |
119 |
tgcctaagttatgtacttcaaaaaagaatatactttagcaaatttatctttcactttcaccttttgtcctaggaaaaataactgtgttatgcccttgcta |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27569610 |
tgcctaagttatgtacttcaaaaaagaatatactttagcaaatttatctttcactttcaccttttgtcctaggaaaaataactgtgttatgcccttgcta |
27569709 |
T |
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| Q |
219 |
ggaatcatgtgttactcctacttcgaaatttctcaggataccaagtcccnnnnnnncttatagcaagcaatgttacttatata |
301 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
27569710 |
ggaatcatgtgttactgctacttcgaaatttctcaggataccaagtccctttttttcttatagcaagcaatgttacttatata |
27569792 |
T |
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