View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10219_low_20 (Length: 255)
Name: NF10219_low_20
Description: NF10219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10219_low_20 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 255
Target Start/End: Complemental strand, 37573287 - 37573046
Alignment:
| Q |
14 |
gcagagatctgagagatgagaatttgggggaatgggaatggggagtggataaagtgggtgagattgtgttggagaaagtagaggatgccattgttgaggt |
113 |
Q |
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| T |
37573287 |
gcagagatctgagagatgagaatttgggggaatgagaatggggagtggataaagtgggtgagattgtgttggagaaagtagaggatgccattgttgaggt |
37573188 |
T |
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| Q |
114 |
ttagtgagcttgtttgtgatgaactgtgttaaatgcagtttgtgcgagtggtgtgggggtgtaacttgaaattaggggggttaatctagagaaatctata |
213 |
Q |
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| T |
37573187 |
ttagtgagcttgtttgtgatgaactgtgttaaatgcagtttgtgcgagtggtgtgggggtgtaacttgaaattaggggggttaatctagagaaatctata |
37573088 |
T |
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| Q |
214 |
acagaggcggaagtaacaaggatgtaagtgcaactaacgatt |
255 |
Q |
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| T |
37573087 |
acagaggcggaagtaacaaggatgtaagtgcaactaacgatt |
37573046 |
T |
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