View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10219_low_24 (Length: 252)
Name: NF10219_low_24
Description: NF10219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10219_low_24 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 11 - 252
Target Start/End: Original strand, 8509391 - 8509633
Alignment:
| Q |
11 |
gagatgaagaatttaaacacatccaatttcagttacttacattttaggtcacatgttaagtgagtgagataggaaagaagcaaaactaatgcatgaaaa- |
109 |
Q |
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| T |
8509391 |
gagatgaagaatttaaacacatccaatttcagttacttacattttaggtcacatgttaagtgagtgagataggaaagaagcaaaactaatgcatgaaaaa |
8509490 |
T |
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| Q |
110 |
aatttggtggctaattttcatacttttcccttaacttgatgatggccacttctcaaaatgctttgtttatttggagggattattcttcaagtcaattaac |
209 |
Q |
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| T |
8509491 |
aatttggtggctaattttcatacttttcccttaacatgatgatggccacttctcaaaatgctttgtttatttggagggattattcttcaagtcaattaac |
8509590 |
T |
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| Q |
210 |
ttcttagagggaaaaagaaagagaatctagcttaccttgaatt |
252 |
Q |
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| T |
8509591 |
ttcttagagggaaaaagaaagagaatctagcttaccttgaatt |
8509633 |
T |
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