View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10220_low_8 (Length: 231)

Name: NF10220_low_8
Description: NF10220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10220_low_8
NF10220_low_8
[»] chr1 (38 HSPs)
chr1 (22-207)||(19451802-19451985)
chr1 (64-207)||(6304246-6304387)
chr1 (22-204)||(35279695-35279875)
chr1 (70-207)||(49198263-49198398)
chr1 (22-207)||(50192544-50192728)
chr1 (22-195)||(21222170-21222341)
chr1 (26-207)||(45760003-45760182)
chr1 (64-207)||(47654345-47654486)
chr1 (25-182)||(45535970-45536125)
chr1 (26-195)||(49418111-49418278)
chr1 (70-204)||(35679125-35679257)
chr1 (70-207)||(31572191-31572326)
chr1 (22-207)||(28824367-28824549)
chr1 (26-207)||(47780738-47780917)
chr1 (70-187)||(32588967-32589082)
chr1 (22-208)||(29556127-29556312)
chr1 (22-194)||(6312597-6312767)
chr1 (22-194)||(29396395-29396565)
chr1 (73-194)||(9577439-9577558)
chr1 (22-166)||(730171-730314)
chr1 (127-208)||(33025629-33025710)
chr1 (22-187)||(51701603-51701766)
chr1 (73-206)||(37014635-37014766)
chr1 (26-172)||(48524346-48524490)
chr1 (70-194)||(48177469-48177591)
chr1 (70-194)||(25612228-25612350)
chr1 (22-174)||(46328065-46328215)
chr1 (70-194)||(9322507-9322629)
chr1 (70-194)||(15835060-15835182)
chr1 (70-194)||(28387400-28387522)
chr1 (22-112)||(18798514-18798604)
chr1 (72-133)||(955823-955882)
chr1 (22-112)||(49230909-49230999)
chr1 (70-112)||(38536176-38536218)
chr1 (70-112)||(38558394-38558436)
chr1 (70-112)||(48668862-48668904)
chr1 (118-186)||(38320023-38320091)
chr1 (70-157)||(51085866-51085951)
[»] chr2 (30 HSPs)
chr2 (22-208)||(24776386-24776570)
chr2 (22-207)||(16269722-16269905)
chr2 (22-207)||(20605267-20605450)
chr2 (22-207)||(31170620-31170803)
chr2 (22-207)||(14198573-14198756)
chr2 (22-208)||(22551758-22551942)
chr2 (22-207)||(5093043-5093226)
chr2 (22-207)||(12407411-12407594)
chr2 (22-207)||(35317093-35317276)
chr2 (22-207)||(43847677-43847860)
chr2 (64-174)||(1789515-1789623)
chr2 (22-204)||(305464-305644)
chr2 (70-195)||(32125332-32125455)
chr2 (22-162)||(44765806-44765944)
chr2 (73-207)||(9120208-9120340)
chr2 (22-194)||(28844586-28844756)
chr2 (22-174)||(33135654-33135804)
chr2 (70-186)||(10657485-10657599)
chr2 (70-194)||(18177346-18177468)
chr2 (70-194)||(25288238-25288360)
chr2 (70-174)||(26788865-26788967)
chr2 (22-112)||(7026635-7026725)
chr2 (22-112)||(28740372-28740462)
chr2 (69-135)||(379015-379079)
chr2 (22-112)||(3574878-3574968)
chr2 (84-174)||(43078656-43078744)
chr2 (70-112)||(6224636-6224678)
chr2 (70-112)||(13833511-13833553)
chr2 (129-206)||(10125297-10125374)
chr2 (64-112)||(10125379-10125427)
[»] chr8 (33 HSPs)
chr8 (22-207)||(24501806-24501989)
chr8 (64-207)||(42937423-42937564)
chr8 (22-207)||(26374423-26374606)
chr8 (22-207)||(42938110-42938293)
chr8 (22-207)||(2704812-2704995)
chr8 (22-207)||(7506892-7507075)
chr8 (22-208)||(23115161-23115344)
chr8 (23-208)||(10392229-10392412)
chr8 (24-207)||(42735270-42735451)
chr8 (70-208)||(5576612-5576748)
chr8 (22-207)||(41479127-41479300)
chr8 (22-194)||(14782141-14782311)
chr8 (22-194)||(44725816-44725986)
chr8 (22-207)||(10295373-10295557)
chr8 (70-194)||(4403185-4403307)
chr8 (70-194)||(9288463-9288585)
chr8 (22-181)||(18958746-18958903)
chr8 (70-207)||(43959735-43959860)
chr8 (70-194)||(43166696-43166818)
chr8 (22-194)||(19717887-19718057)
chr8 (71-208)||(4950008-4950143)
chr8 (22-124)||(32711358-32711458)
chr8 (70-174)||(26856145-26856247)
chr8 (22-187)||(39467481-39467644)
chr8 (22-112)||(4031344-4031434)
chr8 (22-112)||(31623725-31623815)
chr8 (72-194)||(39189822-39189940)
chr8 (70-109)||(42305874-42305913)
chr8 (70-112)||(16362274-16362316)
chr8 (22-112)||(18306047-18306137)
chr8 (22-112)||(32497555-32497645)
chr8 (135-195)||(9770445-9770505)
chr8 (72-173)||(13478277-13478376)
[»] chr7 (52 HSPs)
chr7 (22-207)||(12893439-12893622)
chr7 (23-207)||(30440828-30441010)
chr7 (22-208)||(7718354-7718538)
chr7 (22-207)||(40996642-40996825)
chr7 (22-207)||(7719253-7719436)
chr7 (22-207)||(18914728-18914911)
chr7 (22-195)||(43581095-43581266)
chr7 (70-207)||(7113531-7113666)
chr7 (25-207)||(34695307-34695487)
chr7 (22-207)||(973215-973398)
chr7 (26-207)||(47914301-47914480)
chr7 (22-207)||(20275256-20275439)
chr7 (22-207)||(44343389-44343572)
chr7 (70-207)||(34009092-34009227)
chr7 (22-207)||(39219370-39219552)
chr7 (26-207)||(47879203-47879382)
chr7 (70-207)||(32142910-32143045)
chr7 (70-171)||(43679493-43679592)
chr7 (70-206)||(10068539-10068673)
chr7 (22-194)||(23101322-23101492)
chr7 (70-194)||(28342419-28342541)
chr7 (70-173)||(12963773-12963874)
chr7 (22-194)||(29614770-29614940)
chr7 (22-194)||(39784123-39784293)
chr7 (70-194)||(3022998-3023120)
chr7 (70-170)||(25805764-25805862)
chr7 (70-194)||(28034811-28034933)
chr7 (22-187)||(33382661-33382824)
chr7 (22-205)||(12740397-12740577)
chr7 (64-187)||(43187370-43187491)
chr7 (128-206)||(9179998-9180076)
chr7 (70-194)||(18838461-18838583)
chr7 (22-194)||(7993166-7993336)
chr7 (26-133)||(31638910-31639015)
chr7 (22-112)||(10676506-10676596)
chr7 (22-194)||(8675357-8675527)
chr7 (22-174)||(9882262-9882412)
chr7 (127-182)||(727637-727692)
chr7 (70-182)||(19251611-19251711)
chr7 (128-194)||(19810917-19810983)
chr7 (70-112)||(17001109-17001151)
chr7 (70-112)||(44121986-44122028)
chr7 (70-112)||(47066776-47066818)
chr7 (22-112)||(509680-509770)
chr7 (70-182)||(1470252-1470361)
chr7 (84-187)||(37972880-37972981)
chr7 (70-112)||(37327999-37328041)
chr7 (70-112)||(40460793-40460835)
chr7 (70-112)||(44256852-44256894)
chr7 (137-206)||(3797061-3797129)
chr7 (70-111)||(29585586-29585627)
chr7 (70-157)||(32883854-32883939)
[»] chr6 (14 HSPs)
chr6 (22-207)||(6197471-6197654)
chr6 (22-208)||(1391653-1391837)
chr6 (22-208)||(2300730-2300914)
chr6 (22-207)||(28002694-28002877)
chr6 (72-207)||(29076678-29076811)
chr6 (72-207)||(29111652-29111785)
chr6 (73-206)||(7051925-7052056)
chr6 (70-194)||(31895773-31895895)
chr6 (70-194)||(34773486-34773608)
chr6 (22-194)||(7497105-7497274)
chr6 (70-194)||(14262439-14262561)
chr6 (70-194)||(34759056-34759178)
chr6 (70-112)||(30385143-30385185)
chr6 (70-112)||(31067570-31067612)
[»] chr5 (23 HSPs)
chr5 (22-207)||(21147097-21147280)
chr5 (22-208)||(33656033-33656217)
chr5 (22-181)||(849177-849334)
chr5 (22-207)||(7016732-7016915)
chr5 (22-207)||(5272912-5273095)
chr5 (26-195)||(139307-139474)
chr5 (64-207)||(27458943-27459084)
chr5 (64-195)||(32157899-32158031)
chr5 (22-206)||(1152097-1152279)
chr5 (22-194)||(14000111-14000281)
chr5 (65-167)||(6460865-6460965)
chr5 (70-174)||(13926009-13926111)
chr5 (70-194)||(39852423-39852545)
chr5 (24-187)||(4550270-4550431)
chr5 (73-194)||(7947579-7947698)
chr5 (70-165)||(14465262-14465355)
chr5 (22-112)||(4240538-4240628)
chr5 (70-208)||(9689736-9689871)
chr5 (70-112)||(5949186-5949228)
chr5 (126-208)||(9220709-9220791)
chr5 (73-112)||(1461224-1461263)
chr5 (71-112)||(37013993-37014034)
chr5 (73-109)||(40013791-40013827)
[»] chr3 (52 HSPs)
chr3 (22-207)||(3206199-3206382)
chr3 (22-207)||(10139140-10139323)
chr3 (22-207)||(20498238-20498421)
chr3 (22-207)||(996080-996263)
chr3 (22-207)||(19253856-19254039)
chr3 (22-195)||(52114557-52114729)
chr3 (22-207)||(6589593-6589776)
chr3 (25-208)||(40246876-40247057)
chr3 (22-195)||(33807804-33807976)
chr3 (22-207)||(3999639-3999822)
chr3 (22-207)||(29448852-29449035)
chr3 (23-207)||(37820471-37820653)
chr3 (23-195)||(54625622-54625792)
chr3 (22-187)||(35337764-35337926)
chr3 (22-208)||(25418395-25418579)
chr3 (22-195)||(33996547-33996718)
chr3 (30-207)||(44762031-44762206)
chr3 (69-208)||(5825138-5825275)
chr3 (22-207)||(53929122-53929305)
chr3 (23-186)||(51699495-51699655)
chr3 (22-206)||(40897173-40897355)
chr3 (113-208)||(6131226-6131321)
chr3 (73-206)||(6035048-6035179)
chr3 (70-208)||(27899421-27899547)
chr3 (22-157)||(29030035-29030167)
chr3 (70-194)||(18749689-18749811)
chr3 (22-194)||(36674137-36674307)
chr3 (65-166)||(22057834-22057933)
chr3 (25-146)||(1440007-1440126)
chr3 (70-194)||(32580253-32580375)
chr3 (70-194)||(34484037-34484159)
chr3 (88-207)||(1439888-1440005)
chr3 (22-194)||(11431555-11431725)
chr3 (22-194)||(17946317-17946487)
chr3 (22-194)||(26107290-26107460)
chr3 (22-194)||(44906520-44906690)
chr3 (70-194)||(54628921-54629043)
chr3 (22-174)||(51737753-51737903)
chr3 (22-157)||(52618009-52618142)
chr3 (64-169)||(55235255-55235359)
chr3 (70-181)||(31646304-31646413)
chr3 (22-112)||(23753473-23753563)
chr3 (70-194)||(48379234-48379356)
chr3 (70-194)||(50903247-50903369)
chr3 (127-207)||(52080049-52080123)
chr3 (148-195)||(33807686-33807733)
chr3 (70-112)||(10660612-10660654)
chr3 (65-112)||(52079999-52080046)
chr3 (70-112)||(539491-539533)
chr3 (70-112)||(37454938-37454980)
chr3 (70-181)||(20833069-20833178)
chr3 (126-194)||(39842501-39842569)
[»] scaffold0151 (1 HSPs)
scaffold0151 (22-207)||(38599-38781)
[»] chr4 (56 HSPs)
chr4 (22-208)||(42786713-42786897)
chr4 (22-207)||(25331160-25331343)
chr4 (70-207)||(41881076-41881211)
chr4 (22-207)||(1044836-1045019)
chr4 (22-207)||(12112974-12113157)
chr4 (26-195)||(55302876-55303043)
chr4 (26-195)||(32950842-32951009)
chr4 (64-207)||(34228577-34228718)
chr4 (22-207)||(1112922-1113105)
chr4 (26-207)||(7007407-7007586)
chr4 (70-207)||(39479349-39479484)
chr4 (22-207)||(22202044-22202227)
chr4 (26-207)||(30009671-30009850)
chr4 (23-207)||(3436623-3436805)
chr4 (64-195)||(41320881-41321010)
chr4 (23-172)||(25446080-25446227)
chr4 (64-171)||(7249795-7249900)
chr4 (22-171)||(28541727-28541874)
chr4 (64-207)||(37046444-37046586)
chr4 (26-180)||(19740929-19741081)
chr4 (22-174)||(53275868-53276018)
chr4 (22-207)||(46635642-46635819)
chr4 (84-207)||(24130975-24131097)
chr4 (64-207)||(31314736-31314867)
chr4 (22-194)||(5441433-5441603)
chr4 (22-194)||(27768085-27768255)
chr4 (22-194)||(54341173-54341343)
chr4 (70-184)||(27454095-27454207)
chr4 (70-194)||(37828409-37828531)
chr4 (73-207)||(9163156-9163280)
chr4 (64-157)||(23465026-23465117)
chr4 (23-144)||(25504696-25504815)
chr4 (69-197)||(44770857-44770983)
chr4 (70-194)||(48261204-48261326)
chr4 (70-194)||(54853475-54853597)
chr4 (22-194)||(51320950-51321120)
chr4 (22-181)||(37915856-37916013)
chr4 (128-206)||(11090437-11090515)
chr4 (118-194)||(8711989-8712065)
chr4 (118-206)||(24736458-24736546)
chr4 (70-195)||(40537166-40537279)
chr4 (70-135)||(23987291-23987354)
chr4 (70-194)||(32322168-32322290)
chr4 (24-112)||(49834900-49834988)
chr4 (70-112)||(32684075-32684117)
chr4 (22-112)||(28483928-28484018)
chr4 (22-112)||(29649754-29649844)
chr4 (64-112)||(12913295-12913343)
chr4 (120-208)||(39307246-39307334)
chr4 (69-112)||(56445432-56445475)
chr4 (70-112)||(5800055-5800097)
chr4 (64-157)||(28370995-28371086)
chr4 (70-112)||(30967386-30967428)
chr4 (128-194)||(36479249-36479314)
chr4 (70-112)||(36479318-36479360)
chr4 (128-194)||(56445362-56445428)
[»] scaffold0400 (1 HSPs)
scaffold0400 (22-207)||(15027-15210)
[»] scaffold0365 (1 HSPs)
scaffold0365 (22-207)||(15670-15853)
[»] scaffold0004 (1 HSPs)
scaffold0004 (22-207)||(102125-102308)
[»] scaffold0113 (1 HSPs)
scaffold0113 (22-208)||(38888-39072)
[»] scaffold0037 (1 HSPs)
scaffold0037 (22-195)||(100241-100412)
[»] scaffold0276 (1 HSPs)
scaffold0276 (70-195)||(545-668)
[»] scaffold0543 (1 HSPs)
scaffold0543 (70-194)||(10638-10760)
[»] scaffold0110 (1 HSPs)
scaffold0110 (70-194)||(39624-39746)
[»] scaffold0054 (1 HSPs)
scaffold0054 (71-194)||(36914-37035)
[»] scaffold1504 (1 HSPs)
scaffold1504 (70-207)||(942-1076)
[»] scaffold0042 (1 HSPs)
scaffold0042 (70-194)||(58083-58205)
[»] scaffold0922 (1 HSPs)
scaffold0922 (22-112)||(4230-4320)
[»] scaffold0347 (1 HSPs)
scaffold0347 (128-206)||(14894-14972)


Alignment Details
Target: chr1 (Bit Score: 102; Significance: 8e-51; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 19451985 - 19451802
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||||||||||||||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||| ||||||||||  |||||||    
T  19451985 gtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaa--tcagatt 19451888  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||    
T  19451887 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgtttttt 19451802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 6304387 - 6304246
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcatta 163  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||||||| |    
T  6304387 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttgatggattttgtgggattttctagtgaaattttagcatga 6304290  T
Q  164 aaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||||||||| |||||||||||  |||||||| ||||||||||    
T  6304289 aaaagtctttcatgaaaacatgaaatttcttatgattgtttttt 6304246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 204
Target Start/End: Original strand, 35279695 - 35279875
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| ||| |||||||| ||||||||||||||||  |||||||    
T  35279695 gtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaa--tcagatt 35279792  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttt 204  Q
    ||||| |||||||| |||||||||| |||||||| | ||| |||||||||||| |||||||||||| |||||||  |||||||    
T  35279793 ttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagatttcttagaattgttt 35279875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 70 - 207
Target Start/End: Complemental strand, 49198398 - 49198263
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||||||| |||||||    
T  49198398 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 49198301  T
Q  170 ctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||||||  |||||||  ||||||||||    
T  49198300 ctttcatgaaaacatgatatttcttaggattgtttttt 49198263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 50192728 - 50192544
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnn-gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagat 120  Q
    ||||||||||||| |||||||||| ||||||| ||        ||||| ||||||||||||| |||||||||| | ||||||||||||||||  ||||||    
T  50192728 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaa--tcagat 50192631  T
Q  121 tttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    |||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| ||| |||  ||||||||||    
T  50192630 tttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattttttaggattgtttttt 50192544  T

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Target: chr1; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 22 - 195
Target Start/End: Original strand, 21222170 - 21222341
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       |||||  |||||||||||| |||||||||||| |||||||||||||||| |  |||||    
T  21222170 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatcattcaaatttcgaaggattgtttaataaata--agatt 21222267  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctta 195  Q
    ||||| |||||||| ||||||| || |||||||||||||| |||||||||||| |||||||||||| |||||||    
T  21222268 ttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 21222341  T

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Target: chr1; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 26 - 207
Target Start/End: Complemental strand, 45760182 - 45760003
Alignment:
Q  26 tgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttga 125  Q
    ||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| ||||||| |||| ||||||||||||||||  |||||||||||    
T  45760182 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaacttcgaaggattgtttaataaa--tcagattttga 45760085  T
Q  126 tagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    | |||||||| |||||||||| |||||||||||||| ||||||| |||  |||||||||||| |||||||  ||||||||||    
T  45760084 tggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagatttcttaggattgtttttt 45760003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 47654486 - 47654345
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcatta 163  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||||| | ||||||||  ||||||||||||| |    
T  47654486 gtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaa--tcagattttgatggattttgtggaattttctagggaaattttagcatga 47654389  T
Q  164 aaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    |||||| |||| |||||||||||| |||||||  ||||||||||    
T  47654388 aaaagtatttcatgaaaacatgagatttcttaggattgtttttt 47654345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 45535970 - 45536125
Alignment:
Q  25 ttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttg 124  Q
    |||||||||| |||||||||| ||||||  ||       ||||| ||||||||||||| |||||||||||| | ||||||||||||||  ||||||||||    
T  45535970 ttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaa--tcagattttg 45536067  T
Q  125 atagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaac 182  Q
    || |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||    
T  45536068 atggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 45536125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 26 - 195
Target Start/End: Original strand, 49418111 - 49418278
Alignment:
Q  26 tgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttga 125  Q
    ||||||||| ||| |||||| ||||||| ||       ||||| ||||||||||||| |||||||||||  ||||||||||||||||  |||||||||||    
T  49418111 tgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaa--tcagattttga 49418208  T
Q  126 tagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctta 195  Q
    | |||||||| |||||||||| |||||||||||||| ||||| |||||| |||||| ||||| |||||||    
T  49418209 tggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgagatttctta 49418278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 70 - 204
Target Start/End: Complemental strand, 35679257 - 35679125
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||  | |||||||||| |||||||||||||| |||||||    
T  35679257 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagt 35679160  T
Q  170 ctttcgtgaaaacatgagctttcttattattgttt 204  Q
    ||||| |||| ||||||| |||||||  |||||||    
T  35679159 ctttcatgaagacatgagatttcttaagattgttt 35679125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 70 - 207
Target Start/End: Complemental strand, 31572326 - 31572191
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| ||| |||||||| ||||||||||||||||  |||||||||||| |||||||| ||||||| || ||||||||||| || |||||||    
T  31572326 tggtattcaaaatcatttaaatttcgaaggattgtttaataaa--tcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagt 31572229  T
Q  170 ctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| ||||| |||||| |||||||  ||||||||||    
T  31572228 ctttcatgaaatcatgagatttcttagaattgtttttt 31572191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 28824549 - 28824367
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||  ||||||||||||| |||||||||||| || |||||||||||||  |||||||    
T  28824549 gtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatcattcaaatttcgaag-attgtttaataaa--tcagatt 28824453  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| ||||||||||  ||||||||| ||| |||||||||||  | |||||||||| |||||||  ||||||||||    
T  28824452 ttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgagatttcttaggattgtttttt 28824367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 47780738 - 47780917
Alignment:
Q  26 tgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttga 125  Q
    ||||||||| |||||||||| ||||||| ||       ||||| || |||||||||| ||||||| ||   ||||||||||||||||  |||||||||||    
T  47780738 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgtttaataaa--tcagattttga 47780835  T
Q  126 tagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    | |||||||| |||||||||| |||||||||| ||| ||||||| |||| |||||||||||| |||||||  ||||||||||    
T  47780836 tggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattgtttttt 47780917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 70 - 187
Target Start/End: Complemental strand, 32589082 - 32588967
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||| | ||||||||||||||||  || ||||||||| ||||||||  ||||||||| |||||||||||||| |||||||    
T  32589082 tggtattcaaaatcattcaaattttgaaggattgtttaataaa--tcggattttgatggattttgtgagattttctagtgaaattttagcataaaaaagt 32588985  T
Q  170 ctttcgtgaaaacatgag 187  Q
    ||||| ||||||||||||    
T  32588984 ctttcatgaaaacatgag 32588967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 29556127 - 29556312
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||||| |||| |||||||||| ||||||| ||        |||| || |||||||||| |||||||||||| | ||||||||||||||  | |||||    
T  29556127 gtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaaagattgtttaataaa--ttagatt 29556224  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaa-acatgagctttcttattattgttttttc 208  Q
    ||||| |||||| | ||||||||||||||||||||||| | |||||||||||  ||||| ||||||| |||||||  |||||||||||    
T  29556225 ttgatggattttatgggattttctaatgaaattttagcttgaaaaagtcttttatgaaacacatgagatttcttaggattgttttttc 29556312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 6312597 - 6312767
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  6312597 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 6312694  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  6312695 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6312767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 29396565 - 29396395
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  29396565 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 29396468  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  29396467 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 29396395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 9577558 - 9577439
Alignment:
Q  73 tattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtctt 172  Q
    |||||||||| |||||||||| | ||||||||||||||||  |  ||||||||| ||||||||  ||||||||| ||||||||||| || ||||| ||||    
T  9577558 tattcaaaatcattcaaatttagaaggattgtttaataaa--ttggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctt 9577461  T
Q  173 tcgtgaaaacatgagctttctt 194  Q
    || |||||||||||| ||||||    
T  9577460 tcatgaaaacatgagatttctt 9577439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 730171 - 730314
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnn-gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagat 120  Q
    ||||||||||||| |||||||||| ||||||| ||        ||||| ||||||||||||| ||||||||||||  | |||||||||||||  ||||||    
T  730171 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgacgaattgtttaataaa--tcagat 730268  T
Q  121 tttgatagattttgttggattttctaatgaaattttagcattaaaa 166  Q
    |||||| ||||||||  ||||||||| |||||||||||||| ||||    
T  730269 tttgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 33025629 - 33025710
Alignment:
Q  127 agattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||| |||||||||||| |||||||| ||||| |||||    
T  33025629 agattttgtgggattttctaataaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgtgttttc 33025710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 51701603 - 51701766
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  51701603 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 51701700  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgag 187  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| |||||    
T  51701701 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 51701766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 206
Target Start/End: Complemental strand, 37014766 - 37014635
Alignment:
Q  73 tattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtctt 172  Q
    |||||||||| |||||||||||  | |||||||| |||||  |   |||||||| |||||||| |||||||||| |||||||||||||| |||||||||     
T  37014766 tattcaaaatcattcaaatttctaaagattgttttataaa--ttgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctc 37014669  T
Q  173 tcgtgaaaacatgagctttcttattattgttttt 206  Q
    || | |||||||||| |||||||  |||||||||    
T  37014668 tcataaaaacatgagatttcttaagattgttttt 37014635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 48524346 - 48524490
Alignment:
Q  26 tgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttga 125  Q
    |||||||||||||||| ||| ||||||| ||       ||||  || |||||||||| |||||||||| | | |||||||||||  ||||||| ||||||    
T  48524346 tgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaatcattcaaattttgaaagattgtttaat--aaatcagtttttga 48524443  T
Q  126 tagattttgttggattttctaatgaaattttagcattaaaaagtctt 172  Q
    | |||||||| |||||||||| |||||||||| ||| ||||||||||    
T  48524444 tggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 48177591 - 48177469
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| | ||||||||||||||  |  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  48177591 tggtattcaaaatcattcaaatttcgaatgattgtttaataaa--ttggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 48177494  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  48177493 ctttcatgaaaagatgagatttctt 48177469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 25612228 - 25612350
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||  |||||||||||||  ||||  ||||||||| |||||||| ||||||| || |  ||||||| ||  |||||||    
T  25612228 tggtattcaaaatcattcaaatttcaaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagt 25612325  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  25612326 ctttcatgaaaagatgagatttctt 25612350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 46328065 - 46328215
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||   |||  ||||    
T  46328065 gtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaat--taattggatt 46328162  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttc 174  Q
    ||||| |||||||| ||||||| || || ||||||| ||  ||||||||||||    
T  46328163 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 46328215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 9322629 - 9322507
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||| | ||||||||||||||||  |   |||||||| |||||| | ||||||| || || ||||||| ||  |||||||    
T  9322629 tggtattcaaaatcattcaaatttagaaggattgtttaataaa--ttgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagt 9322532  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  9322531 ctttcatgaaaagatgagatttctt 9322507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 15835182 - 15835060
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| ||||||||| |  ||||||||||||||||  |  ||||||||| |||||| | ||||||| || || ||||||| ||  |||||||    
T  15835182 tggtattcaaaatcattcaaattgcaaaggattgtttaataaa--ttggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagt 15835085  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  15835084 ctttcatgaaaagatgagatttctt 15835060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 28387522 - 28387400
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||| | |||||||||||| |||||||||||||  ||||  ||||||||| |||||||| ||||||| || |  ||||||| ||  |||||||    
T  28387522 tggtattcaaattcattcaaatttcgaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagt 28387425  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| | |||| ||||| ||||||    
T  28387424 ctttcataaaaagatgagatttctt 28387400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 18798514 - 18798604
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| ||||||||||||||||    
T  18798514 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 18798604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  72 gtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagatttt 133  Q
    ||||||||||| |||||||||||| ||| |||||||||  ||||||||||||||| ||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaat--aaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 49230909 - 49230999
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||| |||||||||    
T  49230909 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaa 49230999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 38536218 - 38536176
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||  ||||||||||||||||    
T  38536218 tggtattcaaaattattcaaatttcaaaggattgtttaataaa 38536176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 38558436 - 38558394
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||  ||||||||||||||||    
T  38558436 tggtattcaaaattattcaaatttcaaaggattgtttaataaa 38558394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 48668904 - 48668862
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| | ||||||||||||||    
T  48668904 tggtattcaaaattattcaaatttcgaaagattgtttaataaa 48668862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 38320023 - 38320091
Alignment:
Q  118 gattttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatga 186  Q
    ||||||||||||||||||||| |||| | |   ||||||||||  |||||||||||| |||||| ||||    
T  38320023 gattttgatagattttgttgggtttttttagtgaattttagcacaaaaaagtctttcatgaaaatatga 38320091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 157
Target Start/End: Original strand, 51085866 - 51085951
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaatttta 157  Q
    |||||||||||||||||||||||| | |||||| || |||  ||||  |||||||||  ||||||| | |||||||  ||||||||||    
T  51085866 tggtattcaaaataattcaaattttgaaggattattaaat--aaattggattttgatgaattttgtggaattttcttgtgaaatttta 51085951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 5e-49; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 24776386 - 24776570
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  24776386 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 24776483  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  |||||||||||    
T  24776484 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttttc 24776570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 16269722 - 16269905
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  16269722 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 16269819  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| ||||||| || |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  16269820 ttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 16269905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 20605267 - 20605450
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| ||| |||||||| ||||||||||||||||  |||||||    
T  20605267 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaa--tcagatt 20605364  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  20605365 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 20605450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 31170803 - 31170620
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||  ||||||||||||||||  |||||||    
T  31170803 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaa--tcagatt 31170706  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  31170705 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 31170620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 14198756 - 14198573
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||| | ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  14198756 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 14198659  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| ||||| |||||| |||||||||||| |||||||  ||||||||||    
T  14198658 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaggattgtttttt 14198573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 22551942 - 22551758
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||||||||||| ||       ||||| ||||||||||||| |||||||||||| | ||||||||| ||||  | | |||    
T  22551942 gtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaatgattgtttattaaa--ttaaatt 22551845  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    ||||| |||||||| |||||||||| |||||||||||||| ||||||| |||| |||||||||||| |||||||| |||||||||||    
T  22551844 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttatgattgttttttc 22551758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 5093226 - 5093043
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||  ||||||| ||       ||||| | ||||||||||| |||||||||| | ||||||||||||||||  |||||||    
T  5093226 gtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattttgaaggattgtttaataaa--tcagatt 5093129  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| ||||||||||||||||||||||||| |||||||||||| | |||||||||| |||||||  ||||||||||    
T  5093128 ttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttt 5093043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 12407411 - 12407594
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||| ||||| ||||||| ||       ||||| ||||||||||||| |||||||||| | ||||||||||||||||  |||||||    
T  12407411 gtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaa--tcagatt 12407508  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||| ||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  12407509 ttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttt 12407594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 35317093 - 35317276
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||||  |||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  35317093 gtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 35317190  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| | |||||||| |||||||||||||| |||||||||||| ||||||||| || |||||||  ||||||||||    
T  35317191 ttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaacattgtttttt 35317276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 43847677 - 43847860
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| | ||||||||||| |||||||||||| ||||||||||||||||  ||||| |    
T  43847677 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagaat 43847774  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| | |||||||| |||||||||||||| ||||||||| || |||||||||||| |||||||  ||||||||||    
T  43847775 ttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatttcttaggattgtttttt 43847860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 1789515 - 1789623
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcatta 163  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||||| ||||||||||||||||||||||||| |    
T  1789515 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttgatggattttgtgggattttctaatgaaattttagcatga 1789612  T
Q  164 aaaagtctttc 174  Q
    |||||||||||    
T  1789613 aaaagtctttc 1789623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 204
Target Start/End: Complemental strand, 305644 - 305464
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||| | | ||||||||||||||  |||||||    
T  305644 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaatgattgtttaataaa--tcagatt 305547  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttt 204  Q
    | ||| ||||||||  ||||||||| ||||||||||| || |||||||||||| |||||||||||| |||||||  |||||||    
T  305546 tcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatttcttaggattgttt 305464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 70 - 195
Target Start/End: Original strand, 32125332 - 32125455
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||||| |||||||||| | |||||||||||| |||||||    
T  32125332 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagt 32125429  T
Q  170 ctttcgtgaaaacatgagctttctta 195  Q
    ||||| |||||| ||||| |||||||    
T  32125430 ctttcatgaaaatatgagatttctta 32125455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 44765806 - 44765944
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||| ||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| | |||||||||||||| |  |||||    
T  44765806 gtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaata--agatt 44765903  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcatt 162  Q
    ||||| |||||||| |||||||||| |||||||||||||||    
T  44765904 ttgatggattttgtgggattttctagtgaaattttagcatt 44765944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 73 - 207
Target Start/End: Original strand, 9120208 - 9120340
Alignment:
Q  73 tattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtctt 172  Q
    |||||||||| ||||| ||||   ||||||||||||||||  | |||||||||| |||||||| |||||||||| ||||||||||| ||  |||| ||||    
T  9120208 tattcaaaatcattcagattttaaaggattgtttaataaa--ttagattttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctt 9120305  T
Q  173 tcgtgaaaacatgagctttcttattattgtttttt 207  Q
    || |||||||||||| |||||||  ||||||||||    
T  9120306 tcatgaaaacatgagatttcttaggattgtttttt 9120340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 28844586 - 28844756
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  |||| |||||    
T  28844586 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattagatt 28844683  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| | ||||| || || |||||||  |  |||||||||||| | |||| ||||| ||||||    
T  28844684 ttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgagatttctt 28844756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 33135654 - 33135804
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  33135654 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 33135751  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttc 174  Q
    ||||| |||||||| ||||||| || || ||||||| ||  ||||||||||||    
T  33135752 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 33135804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 10657485 - 10657599
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| | |||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  10657485 tggtattcaaaatcattcaaatttcgaatgattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 10657582  T
Q  170 ctttcgtgaaaacatga 186  Q
     |||| |||||| ||||    
T  10657583 atttcatgaaaagatga 10657599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 18177346 - 18177468
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| |||||||||||||   |||  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  18177346 tggtattcaaaatcattcaaatttcgaaggattgtttaat--taattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 18177443  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||  | |||| ||||| ||||||    
T  18177444 ctttaataaaaagatgagatttctt 18177468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 25288238 - 25288360
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||||  |||||||||  ||||||| ||||||| || || ||||||| ||  | || ||    
T  25288238 tggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgt 25288335  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  25288336 ctttcatgaaaagatgagatttctt 25288360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 26788865 - 26788967
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||| | |||||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  26788865 tggtattcaaaatcattcaaattttgaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 26788962  T
Q  170 ctttc 174  Q
    |||||    
T  26788963 ctttc 26788967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 7026635 - 7026725
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| ||||||||||||||||    
T  7026635 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 7026725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 28740462 - 28740372
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| ||||||||||||||||    
T  28740462 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 28740372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 379015 - 379079
Alignment:
Q  69 atggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgt 135  Q
    |||||||||||||| |||||||||| | |||||||||||||  ||||  ||||||||||||||||||    
T  379015 atggtattcaaaatcattcaaattttgaaggattgtttaat--aaattggattttgatagattttgt 379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 3574878 - 3574968
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  || |||||||||| |||||||||||| ||||||||||||||||    
T  3574878 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaa 3574968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 43078656 - 43078744
Alignment:
Q  84 attcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttc 174  Q
    |||||||||||| | ||||||||||||||  |  |||||| || |||||||| ||||||| || || ||||||| ||| ||||||||||||    
T  43078656 attcaaatttcgaatgattgtttaataaa--ttggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttc 43078744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 6224678 - 6224636
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| |||||| |||||||||    
T  6224678 tggtattcaaaattattcaaatttcgaaggattatttaataaa 6224636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 13833553 - 13833511
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||| | ||||||||||||||||    
T  13833553 tggtattcaaaatcattcaaattttgaaggattgtttaataaa 13833511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 10125374 - 10125297
Alignment:
Q  129 attttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttt 206  Q
    ||||||| ||||||| || |||||||||| ||  |||||||||||| | |||||| ||| |||||||  |||||||||    
T  10125374 attttgtgggattttttagtgaaattttaacaagaaaaagtctttcataaaaacacgagatttcttaagattgttttt 10125297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 10125427 - 10125379
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||| ||| |||||||||| |||||||||||  ||||||||||||||||    
T  10125427 gtctcatgatattcaaaatcattcaaatttcaaaggattgtttaataaa 10125379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 24501989 - 24501806
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  24501989 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 24501892  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  24501891 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 24501806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 42937423 - 42937564
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcatta 163  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||||| |||||||||| ||||||||||||||||    
T  42937423 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttgatggattttgtgggattttctagtgaaattttagcatta 42937520  T
Q  164 aaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||    
T  42937521 aaaagtctttcatgaaaacatgagatttcttatgattgtttttt 42937564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 26374606 - 26374423
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| |||||||||||||||| |  |||||    
T  26374606 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaata--agatt 26374509  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  26374508 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 26374423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 42938293 - 42938110
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  42938293 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 42938196  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||| | |||||||||||| |||||||||||| |||||||  ||||||||||    
T  42938195 ttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 42938110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 2704995 - 2704812
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| | ||||||||||||||  ||| |||    
T  2704995 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaa--tcaaatt 2704898  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| ||| |||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  2704897 ttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 2704812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 7507075 - 7506892
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||  |||||||||| | ||||||||||||||||  |||||||    
T  7507075 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaaattttgaaggattgtttaataaa--tcagatt 7506978  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| || ||||||||| |||||||  ||||||||||    
T  7506977 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttcttaggattgtttttt 7506892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 23115344 - 23115161
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||| | |||||||||| | ||||||||||||||||  |||||||    
T  23115344 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa-tcattcaaatttggaaggattgtttaataaa--tcagatt 23115248  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    ||||| |||||||| |||||||||||||||||||| |||| |||||||||||| |||||||||||| || ||||  |||||||||||    
T  23115247 ttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattgttttttc 23115161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 23 - 208
Target Start/End: Complemental strand, 10392412 - 10392229
Alignment:
Q  23 tcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattt 122  Q
    ||||||| |||| |||||||||||||||||| ||       ||||| ||||||||| ||| |||||||||||| ||||||||||||||||  ||||||||    
T  10392412 tcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattcaaatttcgaaggattgtttaataaa--tcagattt 10392315  T
Q  123 tgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    |||| |||||||| |||||||||| |||||||||||||| ||||| |||||| |||||||||||| ||| |||  ||| |||||||    
T  10392314 tgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttattaggatttttttttc 10392229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 207
Target Start/End: Complemental strand, 42735451 - 42735270
Alignment:
Q  24 cttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatttt 123  Q
    ||||||||||| ||| |||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| || |||||||||||||  |||||||||    
T  42735451 cttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagtattgtttaataaa--tcagatttt 42735354  T
Q  124 gatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||| |||||||| |||||||||| |||||||||||| | |||||||||||| | |||||||||| |||||||  ||||||||||    
T  42735353 gatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatgagatttcttaggattgtttttt 42735270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 70 - 208
Target Start/End: Complemental strand, 5576748 - 5576612
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| || |||||||||||||   ||||||||||| |||||||| |||||||||| |||||||||||||| |||||||    
T  5576748 tggtattcaaaatcattcaaatttcgaagaattgtttaataaac--cagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 5576651  T
Q  170 ctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    ||||  |||||||||||| |||||||  |||||||||||    
T  5576650 cttttatgaaaacatgagatttcttaggattgttttttc 5576612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 41479127 - 41479300
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||||||||||||||||| |||||||||||| | |||||||||||  |||||         
T  41479127 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaatgattgtttaat--aaatc----- 41479219  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
         ||||||||| |||||||||| | |||||||||||| ||||| |||||| |||||||||||| |||||||  ||||||||||    
T  41479220 -----agattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgtttttt 41479300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 14782311 - 14782141
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||| | ||||||||||||||||  |  ||||    
T  14782311 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaa--ttggatt 14782214  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  14782213 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 14782141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 44725986 - 44725816
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||| | ||||||||||||||||  |  ||||    
T  44725986 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaa--ttggatt 44725889  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  44725888 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 44725816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 10295557 - 10295373
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  10295557 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 10295460  T
Q  122 ttgataga-ttttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| || |||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||   ||||||||||    
T  10295459 ttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttt 10295373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 4403185 - 4403307
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| ||||||||||||||||  |  | ||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  4403185 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa--ttgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagt 4403282  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  4403283 ctttcatgaaaatatgagatttctt 4403307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 9288585 - 9288463
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||||  |||||||||  ||||||| ||||||| || || ||||||| ||  |||||||    
T  9288585 tggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagt 9288488  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  9288487 ctttcatgaaaagatgagatttctt 9288463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 18958903 - 18958746
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  18958903 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 18958806  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaa 181  Q
    || || |||||||| ||||||| || || ||||||| ||  |||||||||||| ||||||    
T  18958805 ttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 18958746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 207
Target Start/End: Original strand, 43959735 - 43959860
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| | ||||||||||||||  |||||||||||| |||||||| |          |||||||||||||| |||||||    
T  43959735 tggtattcaaaatcattcaaatttcgaatgattgtttaataaa--tcagattttgatggattttgtgg----------tgaaattttagcatgaaaaagt 43959822  T
Q  170 ctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||  | |||||||||| |||||||| ||||||||||    
T  43959823 ctttaattaaaacatgagatttcttatgattgtttttt 43959860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 43166818 - 43166696
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||||||| |||||||| ||||||| |  || ||||||| ||  |||||||    
T  43166818 tggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagt 43166721  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
     |||| |||||| ||||| ||||||    
T  43166720 ttttcatgaaaagatgagatttctt 43166696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 19718057 - 19717887
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| || ||||||||||  ||||  ||||    
T  19718057 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagaattgtttaat--aaattggatt 19717960  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    || || |||||||| ||||||| || || ||||||| ||  |||||||||||  |||||| ||||| ||||||    
T  19717959 ttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttctt 19717887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 4950143 - 4950008
Alignment:
Q  71 ggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtc 170  Q
    |||||||||||| |||||| ||||  | |||| |||||||||  | |||||||||| || ||||| | |||||||| |||||||||||||| ||||| |     
T  4950143 ggtattcaaaatcattcaagtttcaaaagattatttaataaa--ttagattttgatggaatttgtggaattttctagtgaaattttagcatgaaaaaata 4950046  T
Q  171 tttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    |||| || |||||| || |||||||  |||||||||||    
T  4950045 tttcatgcaaacataagatttcttaaaattgttttttc 4950008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 32711458 - 32711358
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| ||| |||||||| |||||||||||||  ||||||||||    
T  32711458 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaaggattgtttaat--aaatcagatt 32711361  T
Q  122 ttg 124  Q
    |||    
T  32711360 ttg 32711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 26856145 - 26856247
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| || ||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  26856145 tggtattcaaaatcattcaaatttcgaagtattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 26856242  T
Q  170 ctttc 174  Q
    |||||    
T  26856243 ctttc 26856247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 39467644 - 39467481
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||   |||    
T  39467644 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattgaatt 39467547  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgag 187  Q
    ||||| |||||| | ||||||| || || ||||||| ||  ||||| |||||| |||||| |||||    
T  39467546 ttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgag 39467481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 4031434 - 4031344
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| || ||||       ||||  ||||||||||||| |||||||||||| ||||||||||||||||    
T  4031434 gtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 4031344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 31623725 - 31623815
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| ||||||||||||||||    
T  31623725 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 31623815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 39189940 - 39189822
Alignment:
Q  72 gtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtct 171  Q
    |||||||| || |||||||||||| ||||||||||||||||     || |||||| ||||||| || |||||||| | |||||||| ||  ||||| |||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaa---ttgaatttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatct 39189845  T
Q  172 ttcgtgaaaacatgagctttctt 194  Q
    ||| |||||||||||| ||||||    
T  39189844 ttcatgaaaacatgagatttctt 39189822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 109
Target Start/End: Complemental strand, 42305913 - 42305874
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaat 109  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  42305913 tggtattcaaaataattcaaatttcgaaggattgtttaat 42305874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 16362274 - 16362316
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  16362274 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa 16362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 18306137 - 18306047
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| | ||||||||||||||    
T  18306137 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaa 18306047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 32497555 - 32497645
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| | ||||||||||||||    
T  32497555 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaa 32497645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 9770505 - 9770445
Alignment:
Q  135 ttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctta 195  Q
    ||||||||||||||||||||||| ||| ||||| | |||| | |||||||||| |||||||    
T  9770505 ttggattttctaatgaaattttaacataaaaaaatatttcatcaaaacatgagatttctta 9770445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 13478376 - 13478277
Alignment:
Q  72 gtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtct 171  Q
    |||||||||||  || |||||||| |||||||||||||  |||| |||||| | | |||||||| ||||||| ||   |||||||||||| | |||||||    
T  13478376 gtattcaaaatcttttaaatttcgaaggattgtttaat--aaattagatttcgttggattttgtaggattttttagctaaattttagcatgataaagtct 13478279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 12893439 - 12893622
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||||||||||||||||||||| ||||||| ||       ||||||||||||||||||| |||||||||||| || |||||||||||||  |||||||    
T  12893439 gtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaagaattgtttaataaa--tcagatt 12893536  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| ||||||||  ||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  12893537 ttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 12893622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 30440828 - 30441010
Alignment:
Q  23 tcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattt 122  Q
    |||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  ||||||||    
T  30440828 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattt 30440925  T
Q  123 tgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    |||| |||||||| |||||||||| ||||||||||| || ||||||||||||||||||||||||| |||||||  ||||||||||    
T  30440926 tgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgagatttcttaggattgtttttt 30441010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 7718538 - 7718354
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  7718538 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 7718441  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    ||||| |||||||| |||||||||| |||||||||||||| ||||| |||||| |||||||||||| |||||||  |||||||||||    
T  7718440 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgttttttc 7718354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 40996825 - 40996642
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||  ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  40996825 gtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 40996728  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  40996727 ttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 40996642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 7719436 - 7719253
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||        |||| ||||||||||||| |||||||||||| | ||||||||||||||  |||||||    
T  7719436 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaa--tcagatt 7719339  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  7719338 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 7719253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 18914911 - 18914728
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||  ||| ||||||||||||  |||||||    
T  18914911 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggtttgtttaataaa--tcagatt 18914814  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  18914813 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 18914728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 195
Target Start/End: Complemental strand, 43581266 - 43581095
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||| ||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  43581266 gtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 43581169  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctta 195  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||    
T  43581168 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 43581095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 70 - 207
Target Start/End: Original strand, 7113531 - 7113666
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||   |||||||||||| |||||||    
T  7113531 tggtattcaaaataattcaaatttcgcaggattgtttaataaa--tcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagt 7113628  T
Q  170 ctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||||||  |||||||  ||||||||||    
T  7113629 ctttcatgaaaacatgaaatttcttaggattgtttttt 7113666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 25 - 207
Target Start/End: Original strand, 34695307 - 34695487
Alignment:
Q  25 ttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttg 124  Q
    |||||||||| |||||||||| ||||||| ||       ||| | ||||||||||||  |||||||||||| ||||||||||||||||  ||||||||||    
T  34695307 ttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaa--tcagattttg 34695404  T
Q  125 atagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    || |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  34695405 atggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 34695487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 973215 - 973398
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||        | || ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  973215 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 973312  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||  |||||||||||| |||||||||||| |||||||  ||||||||||    
T  973313 ttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 973398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 47914301 - 47914480
Alignment:
Q  26 tgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttga 125  Q
    ||||||||| |||||||||| ||||||| ||       ||||| || |||||||||| |||||||||||| |||||||||||||||| |  |||||||||    
T  47914301 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaata--agattttga 47914398  T
Q  126 tagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    | |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  47914399 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttt 47914480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 20275439 - 20275256
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||| ||||||| |||||||||| ||||||| ||       |||| |||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  20275439 gtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 20275342  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| ||||||| || |||||||||||||| ||||||||| || ||||| |||||| |||||||  ||||||||||    
T  20275341 ttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagatttcttagcattgtttttt 20275256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 44343572 - 44343389
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||||| |||| |||||||||| ||||||| ||       || || ||||||| ||||| |||||||||||| ||||||||||||||||  |||||||    
T  44343572 gtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 44343475  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| ||||||||||||  ||||||||||| |||||||  ||||||||||    
T  44343474 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgagatttcttaggattgtttttt 44343389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 70 - 207
Target Start/End: Original strand, 34009092 - 34009227
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||||| | |||||||||| |||||||||||| |||||||    
T  34009092 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagt 34009189  T
Q  170 ctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    |||||  ||||||||||| |||||||  ||||||||||    
T  34009190 ctttcaagaaaacatgagatttcttaggattgtttttt 34009227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 39219552 - 39219370
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||||| |||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||| | | ||||||||||||||  |||||||    
T  39219552 gtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattttg-atgattgtttaataaa--tcagatt 39219456  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| | |||||||||| |||||||  ||||||||||    
T  39219455 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttt 39219370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 47879203 - 47879382
Alignment:
Q  26 tgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttga 125  Q
    ||||||||| |||||||||| ||||||| ||       ||||| || |||||||||| ||||||||||   ||||||||||||||||  |||||||||||    
T  47879203 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttaaaaggattgtttaataaa--tcagattttga 47879300  T
Q  126 tagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    | |||||||| | |||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  47879301 tggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttt 47879382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 70 - 207
Target Start/End: Complemental strand, 32143045 - 32142910
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||| | ||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||||||| |||||||    
T  32143045 tggtattcaaaatcattcaaattttgaaggattgtttaataaa--tcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 32142948  T
Q  170 ctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||| | | |||||||||| |||||||  ||||||||||    
T  32142947 cttccataaaaacatgagatttcttaagattgtttttt 32142910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 43679493 - 43679592
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||||||| |||||||    
T  43679493 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 43679590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 70 - 206
Target Start/End: Original strand, 10068539 - 10068673
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||| | ||||||||||||||||  | | |||||||| |||||||| |||||||||| |||||||||||||| |||||||    
T  10068539 tggtattcaaaatcattcaaattttgaaggattgtttaataaa--ttaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 10068636  T
Q  170 ctttcgtgaaaacatgagctttcttattattgttttt 206  Q
     |||| | |||||||||| ||| |||  |||||||||    
T  10068637 atttcataaaaacatgagatttgttaggattgttttt 10068673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 23101322 - 23101492
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  23101322 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 23101419  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  23101420 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 23101492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 28342419 - 28342541
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  28342419 tggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 28342516  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  28342517 ctttcatgaaaagatgagatttctt 28342541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 70 - 173
Target Start/End: Original strand, 12963773 - 12963874
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    |||||| |||||| |||||||||||| ||||||||||||||||  | |||||||||| |||||||| |||||||||| ||||||||||| |  |||||||    
T  12963773 tggtatccaaaatcattcaaatttcgaaggattgtttaataaa--ttagattttgatggattttgtgggattttctagtgaaattttagtaagaaaaagt 12963870  T
Q  170 cttt 173  Q
    ||||    
T  12963871 cttt 12963874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 29614940 - 29614770
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  || |||||||||| |||||||||||| ||||||||||||||||  |  ||||    
T  29614940 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaa--ttggatt 29614843  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  29614842 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 29614770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 39784123 - 39784293
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| ||| |||||||| ||||||||||||||||  |  ||||    
T  39784123 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaa--ttggatt 39784220  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  39784221 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 39784293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 3022998 - 3023120
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  3022998 tggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 3023095  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
     |||| |||||| ||||| ||||||    
T  3023096 ttttcatgaaaagatgagatttctt 3023120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 25805764 - 25805862
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| ||||||||||||||||  |   ||| |||| |||||||| |||||||||||| |||||||||||| |||||||    
T  25805764 tggtattcaaaatcattcaaatttcgtaggattgtttaataaa--ttgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagt 25805861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 28034933 - 28034811
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||  ||||||||||||||||  |  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  28034933 tggtattcaaaattattcaaatttcaaaggattgtttaataaa--ttggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagt 28034836  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  28034835 ctttcatgaaaagatgagatttctt 28034811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 33382661 - 33382824
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       |||| |||||||||||||| ||| |||||||| |||||||||||||  ||||  ||||    
T  33382661 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaatttcgaaggattgtttaat--aaattggatt 33382758  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgag 187  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||  |||||| |||||    
T  33382759 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgag 33382824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 205
Target Start/End: Original strand, 12740397 - 12740577
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| ||||||||||||||| |||| |||| ||       ||||  ||||||||||||| |||||||||||  ||||||||||||||||     ||||    
T  12740397 gtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaatg---gatt 12740493  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttt 205  Q
    |||||||||||||| ||||||| || || ||||||| ||  | |||||||||| | |||| ||||| |||||||  ||||||||    
T  12740494 ttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgagatttcttaagattgtttt 12740577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 43187491 - 43187370
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcatta 163  Q
    |||| |||||||||||||| |||||||||| | || |||||||||||||  |  |||||||||  ||||||| |||||||||| |||||||||| ||  |    
T  43187491 gtctcatggtattcaaaatcattcaaattttgaagcattgtttaataaa--ttggattttgatgaattttgtcggattttctagtgaaattttaacaaga 43187394  T
Q  164 aaaagtctttcgtgaaaacatgag 187  Q
    ||||||||||| |||| |||||||    
T  43187393 aaaagtctttcatgaagacatgag 43187370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 9179998 - 9180076
Alignment:
Q  128 gattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttt 206  Q
    |||||||| |||||||||| |||| ||||||||| |||||||||||| |||||||||||| |||||||  |||||||||    
T  9179998 gattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 9180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 18838461 - 18838583
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| | |||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  18838461 tggtattcaaaatcattcaaatttcgaaagattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 18838558  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
     |||| |||||| ||||| ||||||    
T  18838559 atttcatgaaaagatgagatttctt 18838583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 7993166 - 7993336
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| |||||| |||||| |||| ||       |||| |||||||||||||| |||||||||||| ||||||||||||||||  |   |||    
T  7993166 gtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaa--ttgaatt 7993263  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||| ||| ||||||| || || ||||||| ||  |||||||||||| |||||| || || ||||||    
T  7993264 ttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttctt 7993336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 31638910 - 31639015
Alignment:
Q  26 tgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttga 125  Q
    |||||||||  ||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| |||||||||||||  ||||||||||||||    
T  31638910 tgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaatcagattttga 31639007  T
Q  126 tagatttt 133  Q
    | ||||||    
T  31639008 tggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 10676596 - 10676506
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| ||||||||||||| |||| ||       |||| || ||||||||||| |||||||||||| ||||||||||||||||    
T  10676596 gtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcgaaggattgtttaataaa 10676506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 8675357 - 8675527
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| ||| ||| |||| |||||||||||||  ||||  ||||    
T  8675357 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaacttcgaaggattgtttaat--aaattggatt 8675454  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| ||||||| || || ||||||| ||  ||||| |||||  |||||| ||||| ||||||    
T  8675455 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttctt 8675527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 9882412 - 9882262
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| | |||||||||||  ||||  ||||    
T  9882412 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaat--aaattggatt 9882315  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttc 174  Q
    ||||| |||||||| ||||||| || || |||||||  |  ||||||||||||    
T  9882314 ttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttc 9882262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 727637 - 727692
Alignment:
Q  127 agattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaac 182  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||||| |||||||    
T  727637 agattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 19251611 - 19251711
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| ||||||||||||||||         |||   ||||||| ||||||||||  ||||||||||||| ||||||||    
T  19251611 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa---------ttg---gattttgatggattttcttgtgaaattttagcaataaaaagt 19251698  T
Q  170 ctttcgtgaaaac 182  Q
    ||||| |||||||    
T  19251699 ctttcatgaaaac 19251711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 19810917 - 19810983
Alignment:
Q  128 gattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    |||||||| | |||||||| |||||||||||||| |||| ||||||| |||||||||||| ||||||    
T  19810917 gattttgtggaattttctagtgaaattttagcataaaaatgtctttcatgaaaacatgagatttctt 19810983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 17001151 - 17001109
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  17001151 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa 17001109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 44122028 - 44121986
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  44122028 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa 44121986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 47066776 - 47066818
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  47066776 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa 47066818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 509680 - 509770
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| | ||||||||||||||    
T  509680 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaacgattgtttaataaa 509770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 182
Target Start/End: Complemental strand, 1470361 - 1470252
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    |||||||||||||  |||||||||   || |||||||||| ||  | |||||||||||| |||||| ||||||||| || |||||||||||| ||||| |    
T  1470361 tggtattcaaaatcgttcaaattttaaagcattgtttaatgaa--ttagattttgatag-ttttgtgggattttctgataaaattttagcatgaaaaaat 1470265  T
Q  170 ctttcgtgaaaac 182  Q
    ||||  |||||||    
T  1470264 cttttttgaaaac 1470252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 37972981 - 37972880
Alignment:
Q  84 attcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaaca 183  Q
    |||||||||||| |||||| |||||||||  |  ||||||||| |||||||  ||||||| || || ||||||| ||  |||||||||||| |||||| |    
T  37972981 attcaaatttcgaaggattatttaataaa--ttggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaaga 37972884  T
Q  184 tgag 187  Q
    ||||    
T  37972883 tgag 37972880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 37327999 - 37328041
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||  ||||||||||||||||    
T  37327999 tggtattcaaaatcattcaaatttcaaaggattgtttaataaa 37328041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 40460835 - 40460793
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| | ||||||||||||||    
T  40460835 tggtattcaaaatcattcaaatttcgaatgattgtttaataaa 40460793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 44256894 - 44256852
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| | ||||||||||||||    
T  44256894 tggtattcaaaatcattcaaatttcgaatgattgtttaataaa 44256852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 3797129 - 3797061
Alignment:
Q  137 ggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttt 206  Q
    |||||||||| |||||||||||||| |||||||||||   |||||||| || |||||||  |||||||||    
T  3797129 ggattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-agatttcttaggattgttttt 3797061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 29585586 - 29585627
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataa 111  Q
    ||||||||||||| |||||||||| | |||||||||||||||    
T  29585586 tggtattcaaaatcattcaaattttgaaggattgtttaataa 29585627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 157
Target Start/End: Original strand, 32883854 - 32883939
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaatttta 157  Q
    ||||||||||||| |||||||||||| | ||||||||| |  ||||  ||||||||| ||||| || ||||||| || || |||||||    
T  32883854 tggtattcaaaatcattcaaatttcgaatgattgtttatt--aaattggattttgatggatttcgtgggattttgtagtgtaatttta 32883939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 6197654 - 6197471
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  6197654 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 6197557  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  6197556 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 6197471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 1391653 - 1391837
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||| | ||||||||||||||||  |||||||    
T  1391653 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaa--tcagatt 1391750  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    ||||| |||||||| |||||||||| ||||||||| |||| |||||||||||| |||||||||||| || ||||  |||||||||||    
T  1391751 ttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattgttttttc 1391837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 2300914 - 2300730
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| || |||| ||       ||||| ||||||| ||||| |||||||||||| |||||||||||||||| |  |||||    
T  2300914 gtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaatcattcaaatttcgaaggattgtttaataaata--agatt 2300817  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||| |||||||    
T  2300816 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatttttttttc 2300730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 28002694 - 28002877
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||| ||||||| |||||||||| ||||||| ||       ||||| || |||||||||| |||||||||| | ||||||||||||||||  |||||||    
T  28002694 gtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaa--tcagatt 28002791  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| ||||||||   |||||||| |||||||||||||| |||||||||||| |||||||||||   ||||||  ||||||||||    
T  28002792 ttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaagcttcttaggattgtttttt 28002877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 72 - 207
Target Start/End: Original strand, 29076678 - 29076811
Alignment:
Q  72 gtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtct 171  Q
    ||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||| | |||||||||| |||||||||||||| ||||| |||    
T  29076678 gtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatct 29076775  T
Q  172 ttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||| | |||||||||| ||| |||  ||||||||||    
T  29076776 ttcataaaaacatgagattttttaggattgtttttt 29076811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 72 - 207
Target Start/End: Original strand, 29111652 - 29111785
Alignment:
Q  72 gtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtct 171  Q
    ||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||| | |||||||||| |||||||||||||| ||||| |||    
T  29111652 gtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatct 29111749  T
Q  172 ttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||| | |||||||||| ||| |||  ||||||||||    
T  29111750 ttcataaaaacatgagattttttaggattgtttttt 29111785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 206
Target Start/End: Original strand, 7051925 - 7052056
Alignment:
Q  73 tattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtctt 172  Q
    |||||||||| |||||||||||| ||||||||||||||||  |  ||||||||| |||||||| |||||||||| | |||||||||||| ||||||| ||    
T  7051925 tattcaaaatcattcaaatttcgaaggattgtttaataaa--ttggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttt 7052022  T
Q  173 tcgtgaaaacatgagctttcttattattgttttt 206  Q
    || | ||| |||||| |||||||  |||||||||    
T  7052023 tcataaaatcatgagatttcttagaattgttttt 7052056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 31895773 - 31895895
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| ||||||||||||||||  |  ||||||||| |||||||| |||||||||| || ||||||| ||  |||||||    
T  31895773 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa--ttggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagt 31895870  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  31895871 ctttcatgaaaagatgagatttctt 31895895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 34773486 - 34773608
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||||||| |||||||| |||||||  | || ||||||| ||  |||||||    
T  34773486 tggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagt 34773583  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  34773584 ctttcatgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 7497105 - 7497274
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||| |||| |||| ||       ||||  ||||||||||||| |||||||||||| |||| ||||||||  ||||  ||||    
T  7497105 gtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaat--aaattggatt 7497202  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| ||||||| |||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  7497203 ttgatggattttg-tggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 7497274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 14262561 - 14262439
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| ||| |||||||| |||||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  14262561 tggtattcaaaatcatttaaatttcgaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 14262464  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||| | ||||||    
T  14262463 ctttcatgaaaagatgggatttctt 14262439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 34759178 - 34759056
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||  |||||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  ||||| |    
T  34759178 tggtattcaaaatcattcaaatttccaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaat 34759081  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  34759080 ctttcatgaaaagatgagatttctt 34759056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 30385185 - 30385143
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  30385185 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa 30385143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 31067570 - 31067612
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  31067570 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa 31067612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 21147097 - 21147280
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  21147097 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 21147194  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  21147195 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 21147280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 33656217 - 33656033
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||        |||||||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  33656217 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 33656120  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||| ||||| |||||||  |||||||||||    
T  33656119 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattgttttttc 33656033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 849177 - 849334
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||||||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  849177 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 849274  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaa 181  Q
    |||||||||||||| |||||||||| |||||||||||||| |||||||||||| ||||||    
T  849275 ttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 7016915 - 7016732
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||| ||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  7016915 gtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 7016818  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| | |||||||||| |||||||  ||||||||||    
T  7016817 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagaattgtttttt 7016732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 5273095 - 5272912
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||| ||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| | ||||||||||||||  |||||||    
T  5273095 gtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaa--tcagatt 5272998  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| | |||||||||| ||||||| | |||||||||    
T  5272997 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaattttgtttttt 5272912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 195
Target Start/End: Original strand, 139307 - 139474
Alignment:
Q  26 tgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttga 125  Q
    ||||||||| |||||||||||||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||   ||||||||||    
T  139307 tgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaac--cagattttga 139404  T
Q  126 tagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctta 195  Q
    | ||||||||||||||||| | ||||||||||  || |||||||||||| | |||||||||| |||||||    
T  139405 tggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttctta 139474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 27459084 - 27458943
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcatta 163  Q
    ||||| ||||||||||||| ||||| |||| | ||||||||||||||||  | |||||||||| |||||||| |||||||||| |||||||||||||| |    
T  27459084 gtctagtggtattcaaaatcattcagattttgaaggattgtttaataaa--ttagattttgatggattttgtgggattttctagtgaaattttagcatga 27458987  T
Q  164 aaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    |||| || ||| |||||||||||  |||||||  ||||||||||    
T  27458986 aaaaatcattcatgaaaacatgatatttcttaggattgtttttt 27458943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 195
Target Start/End: Complemental strand, 32158031 - 32157899
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcatta 163  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||  |||| |||||||||  |||||||| |||||||||| | |||||||||||  |    
T  32158031 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattagattttgacggattttgtgggattttctagtaaaattttagcacga 32157934  T
Q  164 aaa---agtctttcgtgaaaacatgagctttctta 195  Q
    |||   |||||||| |||||||||||| |||||||    
T  32157933 aaaaatagtctttcatgaaaacatgagatttctta 32157899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 206
Target Start/End: Complemental strand, 1152279 - 1152097
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| ||||||||||||  |||||||||||||||  |  ||||    
T  1152279 gtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgagggattgtttaataaa--ttggatt 1152182  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttt 206  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||  |||||| ||||| |||||||  |||||||||    
T  1152181 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttcttaagattgttttt 1152097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 14000281 - 14000111
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||| | ||||||||||||||||  |  ||||    
T  14000281 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaa--ttggatt 14000184  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  14000183 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 14000111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 65 - 167
Target Start/End: Original strand, 6460865 - 6460965
Alignment:
Q  65 tctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaa 164  Q
    |||| ||||||||||||| |||||||||||| ||| |||||||||  ||||||||||||||| |||||||  |||||||||| |||||||||| ||| ||    
T  6460865 tctagtggtattcaaaatcattcaaatttcgaaggtttgtttaat--aaatcagattttgatggattttgagggattttctagtgaaattttatcatgaa 6460962  T
Q  165 aaa 167  Q
    |||    
T  6460963 aaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 13926009 - 13926111
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  13926009 tggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 13926106  T
Q  170 ctttc 174  Q
    |||||    
T  13926107 ctttc 13926111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 39852423 - 39852545
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| ||||||||||| |  ||||  ||||||||| |||||| | ||||||| || || ||||||| ||  |||||||    
T  39852423 tggtattcaaaatcattcaaatttcgaaggattgtttact--aaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagt 39852520  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  39852521 ctttcatgaaaagatgagatttctt 39852545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 4550431 - 4550270
Alignment:
Q  24 cttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatttt 123  Q
    |||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||||    
T  4550431 cttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatttt 4550334  T
Q  124 gatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgag 187  Q
    ||| |||||||| | ||||| || || ||||||| ||  ||| |||||||| |||||| |||||    
T  4550333 gatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgag 4550270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 7947698 - 7947579
Alignment:
Q  73 tattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtctt 172  Q
    |||||||||| |||||||||||| |||||||||||||  ||||  ||||||||| |||||||| | ||||| || || ||||||| ||  ||||||||||    
T  7947698 tattcaaaatcattcaaatttcgaaggattgtttaat--aaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctt 7947601  T
Q  173 tcgtgaaaacatgagctttctt 194  Q
    || |||||| | ||| ||||||    
T  7947600 tcatgaaaagaagagatttctt 7947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 165
Target Start/End: Complemental strand, 14465355 - 14465262
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaa 165  Q
    ||||||||||||| |||||||||||| | |||||||||||  ||||| |||||||||  ||||||| | |||||||| | | ||||||||||||||    
T  14465355 tggtattcaaaatcattcaaatttcgaaagattgtttaat--aaatcggattttgatgaattttgtggaattttctagtaatattttagcattaaa 14465262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 4240628 - 4240538
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| ||||||||||||||||    
T  4240628 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 4240538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 208
Target Start/End: Original strand, 9689736 - 9689871
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||| ||||| ||| |||||||| | |||||||| |||||  | |||||||||| |||| |||  ||||||||  | ||||||||  || |||||||    
T  9689736 tggtatttaaaatcatt-aaatttcgaatgattgtttgataaa--ttagattttgatggattgtgtgagattttcttgtaaaattttattatgaaaaagt 9689832  T
Q  170 ctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    ||||| | ||||||| || |||||||| |||||||||||    
T  9689833 ctttcataaaaacataagatttcttatgattgttttttc 9689871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 5949186 - 5949228
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  5949186 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa 5949228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 9220791 - 9220709
Alignment:
Q  126 tagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    |||| ||||| ||||||| || | |||||||| ||  ||||||||||||||||||||||||  |||||||  |||||||||||    
T  9220791 tagaatttgtaggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttcttaggattgttttttc 9220709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 112
Target Start/End: Complemental strand, 1461263 - 1461224
Alignment:
Q  73 tattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  1461263 tattcaaaatcattcaaatttcgaaggattgtttaataaa 1461224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 112
Target Start/End: Original strand, 37013993 - 37014034
Alignment:
Q  71 ggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||||||||| |||||||||||| ||| ||||||||||||    
T  37013993 ggtattcaaaatcattcaaatttcgaagggttgtttaataaa 37014034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 40013827 - 40013791
Alignment:
Q  73 tattcaaaataattcaaatttcgcaggattgtttaat 109  Q
    |||||||||| |||||||||||| |||||||||||||    
T  40013827 tattcaaaatcattcaaatttcgaaggattgtttaat 40013791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 3206382 - 3206199
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  3206382 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 3206285  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||  |||||||||||| |||||||||||| |||||||| ||||||||||    
T  3206284 ttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttatgattgtttttt 3206199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 10139323 - 10139140
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  10139323 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 10139226  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  10139225 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 10139140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 20498238 - 20498421
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  20498238 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 20498335  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  20498336 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 20498421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 996263 - 996080
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||| | ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  996263 gtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 996166  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  996165 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 996080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 19253856 - 19254039
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| |||||||||||||||| |  |||||    
T  19253856 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaata--agatt 19253953  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  19253954 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 19254039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 195
Target Start/End: Original strand, 52114557 - 52114729
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnn-gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagat 120  Q
    ||||||||||||| |||||||||||||||||| ||        ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  52114557 gtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaatttcgcaggattgtttaataaa--tcagat 52114654  T
Q  121 tttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctta 195  Q
    ||||||||||||||| | |||||||| | |||||||||||| ||||| ||||| ||||||||||||| |||||||    
T  52114655 tttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaacatgagatttctta 52114729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 6589593 - 6589776
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| || ||| |||||||||  |||||||    
T  6589593 gtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagaattatttaataaa--tcagatt 6589690  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  6589691 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 6589776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 208
Target Start/End: Original strand, 40246876 - 40247057
Alignment:
Q  25 ttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttg 124  Q
    |||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||| | ||||||||||||||||  ||||||||||    
T  40246876 ttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaa--tcagattttg 40246973  T
Q  125 atagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    || |||||||| |||||||||| ||||||||| |||| |||||||||||| |||||||||||| || ||||| |||||||||||    
T  40246974 atggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttatgattgttttttc 40247057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 22 - 195
Target Start/End: Complemental strand, 33807976 - 33807804
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnn-gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagat 120  Q
    ||||||||||||| |||||||||| ||||||| ||        ||||| ||||||||||||| |||||||||||| ||||||||||||||||  ||||||    
T  33807976 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagat 33807879  T
Q  121 tttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctta 195  Q
    |||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||    
T  33807878 tttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 33807804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 3999822 - 3999639
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||        |||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  3999822 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 3999725  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| ||||||||||| || |||||||||||| | |||||||||| |||||||  ||||||||||    
T  3999724 ttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttt 3999639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 29449035 - 29448852
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||||| |||| |||||||||| | ||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  29449035 gtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 29448938  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| | |||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  29448937 ttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 29448852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 37820653 - 37820471
Alignment:
Q  23 tcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattt 122  Q
    |||||||||||| |||||||| | ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  ||||||||    
T  37820653 tcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattt 37820556  T
Q  123 tgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    |||| |||||||| |||||||| | |||||||||||||| |||||||||||| | |||||||||| |||||||  ||||||||||    
T  37820555 tgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaagattgtttttt 37820471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 23 - 195
Target Start/End: Original strand, 54625622 - 54625792
Alignment:
Q  23 tcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattt 122  Q
    |||||| ||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  ||||||||    
T  54625622 tcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaa--tcagattt 54625719  T
Q  123 tgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctta 195  Q
    |||| |||||||| |||||||||| |||||||||||||| ||||||| |||| |||||||||||| |||||||    
T  54625720 tgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttctta 54625792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 35337764 - 35337926
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| |||||||||||| ||||||||||||| ||||||||||||||||  |||||||    
T  35337764 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaatttcgaaggattgtttaataaa--tcagatt 35337861  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgag 187  Q
    ||||| |||||||| |||||||||| |||||||||||||| ||||||| |||| ||||||||||||    
T  35337862 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgag 35337926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 25418395 - 25418579
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||||||||||| ||        ||||  |||||||||||| ||||||||||   ||||||||||||||||  |||||||    
T  25418395 gtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcattcaaatttgaaaggattgtttaataaa--tcagatt 25418492  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    ||||| |||||||| |||||||||| ||||||||| |||| ||||||| |||| |||||||||||| || ||||  |||||||||||    
T  25418493 ttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgagattccttaggattgttttttc 25418579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 22 - 195
Target Start/End: Complemental strand, 33996718 - 33996547
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||        || | ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  33996718 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 33996621  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctta 195  Q
    ||||| |||||||  |||||||||| |||||||||||||| |||||||||||  | |||||||||| |||||||    
T  33996620 ttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatttctta 33996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 30 - 207
Target Start/End: Complemental strand, 44762206 - 44762031
Alignment:
Q  30 gtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgataga 129  Q
    ||||| |||||||||| ||||||| ||       ||||| ||||||| ||||| |||||| ||||| ||||||||||||||||  |||||||||||| ||    
T  44762206 gtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaaggattgtttaataaa--tcagattttgatgga 44762109  T
Q  130 ttttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    |||||| ||||||| || |||||||||||||| |||||||||||  |||||||||||| |||||||  ||||||||||    
T  44762108 ttttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaagattgtttttt 44762031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 69 - 208
Target Start/End: Original strand, 5825138 - 5825275
Alignment:
Q  69 atggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaag 168  Q
    |||||||||||||| |||||||||| | ||||||||||||||||  |  |||||||||||||||||| ||||||| || ||||||| |||||| ||||||    
T  5825138 atggtattcaaaatcattcaaattttgaaggattgtttaataaa--ttggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaag 5825235  T
Q  169 tctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
     ||||| |||||||||||| |||||||| |||||||||||    
T  5825236 gctttcatgaaaacatgagatttcttatgattgttttttc 5825275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 53929305 - 53929122
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| ||| |||| ||| | |||||||||||||| |  |||||    
T  53929305 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatatcgaacgattgtttaataaata--agatt 53929208  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| ||||| |||||  |||||||||||| ||| |||  ||||||||||    
T  53929207 ttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattttttaggattgtttttt 53929122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 51699655 - 51699495
Alignment:
Q  23 tcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattt 122  Q
    |||||||||||| |||||||||| ||||||| ||        |||| ||||||||||||| |||||||||||| ||||||| |||||||| |  ||||||    
T  51699655 tcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattcaaatttcgaaggattggttaataaata--agattt 51699559  T
Q  123 tgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatga 186  Q
    ||||  ||||||| |||||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  51699558 tgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 206
Target Start/End: Original strand, 40897173 - 40897355
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       |||| |||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  40897173 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 40897270  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttt 206  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||  ||||||||||    
T  40897271 ttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgatattgttttt 40897355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 208
Target Start/End: Complemental strand, 6131321 - 6131226
Alignment:
Q  113 aatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    |||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  |||||||||||    
T  6131321 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttttc 6131226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 206
Target Start/End: Complemental strand, 6035179 - 6035048
Alignment:
Q  73 tattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtctt 172  Q
    |||||||||| |||||||||||| || | |||||||||||  | |||||||||| |||||||| |||||||||| | |||||||||||| ||||||||||    
T  6035179 tattcaaaatcattcaaatttcgaagcaatgtttaataaa--ttagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctt 6035082  T
Q  173 tcgtgaaaacatgagctttcttattattgttttt 206  Q
    || | |||||||||| |||||||  |||||||||    
T  6035081 tcataaaaacatgagatttcttaagattgttttt 6035048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 208
Target Start/End: Original strand, 27899421 - 27899547
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| ||||||||||||||||  ||||||||||          | |||||||||| |||||||||||||| |||||||    
T  27899421 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttg----------taggattttctagtgaaattttagcatgaaaaagt 27899508  T
Q  170 ctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    ||||| |||||||||||  |||||||| |||||||||||    
T  27899509 ctttcatgaaaacatgaaatttcttatgattgttttttc 27899547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 29030035 - 29030167
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||  ||||||||||||| |||||||||| | ||||||||||||||||  |||||||    
T  29030035 gtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaa--tcagatt 29030131  T
Q  122 ttgatagattttgttggattttctaatgaaatttta 157  Q
    ||||| |||||||| | |||||||||||||||||||    
T  29030132 ttgatggattttgtggaattttctaatgaaatttta 29030167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 18749689 - 18749811
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  18749689 tggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 18749786  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  18749787 ctttcatgaaaagatgagatttctt 18749811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 36674307 - 36674137
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||| | ||||||||||||||||  |  ||||    
T  36674307 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaa--ttggatt 36674210  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  36674209 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 36674137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 22057834 - 22057933
Alignment:
Q  65 tctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaa 164  Q
    |||| ||||||| ||||| ||||||||||||  |||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||| ||| ||    
T  22057834 tctagtggtatttaaaatcattcaaatttcgatggattgtttaataaa--tcagattttgatggattttgtgggattttctagtgaaattttaacatgaa 22057931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 1440126 - 1440007
Alignment:
Q  25 ttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttg 124  Q
    |||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||  |||||||||||||  |||||||||||||    
T  1440126 ttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaat--aaatcagattttg 1440029  T
Q  125 atagattttgttggattttcta 146  Q
    || |||||| | ||||||||||    
T  1440028 atggattttatgggattttcta 1440007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 32580253 - 32580375
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||||||| |||||||  ||||||| || || ||||||| ||  |||||||    
T  32580253 tggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagt 32580350  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  32580351 ctttcatgaaaagatgagatttctt 32580375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 34484159 - 34484037
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  ||||| |    
T  34484159 tggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaat 34484062  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  34484061 ctttcatgaaaagatgagatttctt 34484037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 1440005 - 1439888
Alignment:
Q  88 aaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgag 187  Q
    |||||| | ||||||||||||||||  | ||||||||||||||||||| |||||||||| | ||||||| | || ||||||||||||  |||||||||||    
T  1440005 aaatttggaaggattgtttaataaa--ttagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgag 1439908  T
Q  188 ctttcttattattgtttttt 207  Q
     ||| |||  ||||||||||    
T  1439907 attttttaggattgtttttt 1439888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 11431555 - 11431725
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| ||| |||||||| |||||||||||||  ||||  ||||    
T  11431555 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaat--aaattggatt 11431652  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||| | |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  11431653 ttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 11431725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 17946317 - 17946487
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  || |||||||||| |||||||||||  ||||||||||||||||  |  ||||    
T  17946317 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcaaaggattgtttaataaa--ttggatt 17946414  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  17946415 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 17946487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 26107290 - 26107460
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||||||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  26107290 gtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 26107387  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| ||||||||  |||||| || || ||||||| ||  ||||||| |||| | |||| ||||| ||||||    
T  26107388 ttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttctt 26107460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 44906690 - 44906520
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  44906690 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 44906593  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    |||||  ||||||| ||||||| || || ||||||| ||  |||| ||||||| |||||| ||||| ||||||    
T  44906592 ttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgagatttctt 44906520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 54628921 - 54629043
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||  |||||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  54628921 tggtattcaaaatcattcaaatttcaaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 54629018  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| | |||| ||||| ||||||    
T  54629019 ctttcataaaaagatgagatttctt 54629043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 51737903 - 51737753
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  51737903 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 51737806  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttc 174  Q
    ||||| |||||||| ||||||| |  || ||||||| ||  ||||||||||||    
T  51737805 ttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttc 51737753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 157
Target Start/End: Complemental strand, 52618142 - 52618009
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  52618142 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 52618045  T
Q  122 ttgatagattttgttggattttctaatgaaatttta 157  Q
    ||||| |||||||| ||||||| || || |||||||    
T  52618044 ttgatggattttgtgggattttgtagtgtaatttta 52618009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 169
Target Start/End: Original strand, 55235255 - 55235359
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagatttt-gttggattttctaatgaaattttagcatt 162  Q
    |||| ||| |||||||||| |||||||||||| | ||||||||||||||  |  | ||||||| |||||| || |||||||||||||||||||||||||     
T  55235255 gtctcatgatattcaaaatcattcaaatttcgaaagattgtttaataaa--ttggtttttgatggatttttgtgggattttctaatgaaattttagcata 55235352  T
Q  163 aaaaagt 169  Q
    |||||||    
T  55235353 aaaaagt 55235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 181
Target Start/End: Complemental strand, 31646413 - 31646304
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| | ||||||||||| ||  |  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  31646413 tggtattcaaaatcattcaaatttcgaaagattgtttaatgaa--ttggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 31646316  T
Q  170 ctttcgtgaaaa 181  Q
    ||||| ||||||    
T  31646315 ctttcatgaaaa 31646304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 23753563 - 23753473
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| ||||||||||||||||    
T  23753563 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 23753473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 48379234 - 48379356
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||||   |||||||| |||||||| ||||||| || || |||||||  |  |||| ||    
T  48379234 tggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgt 48379331  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| || || ||||||    
T  48379332 ctttcatgaaaagatcagatttctt 48379356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 50903369 - 50903247
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||  | |||||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  ||||| |    
T  50903369 tggtattcaaaatcattcaaattaagaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaat 50903272  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||  |||||| ||||| ||||||    
T  50903271 cttttatgaaaatatgagatttctt 50903247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 52080049 - 52080123
Alignment:
Q  127 agattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||||||| ||||||||||||||||||||||||| |||||||      |||||||||||| |||||||  ||||||||||    
T  52080049 agattttgtgggattttctaatgaaattttagcatgaaaaagt------tgaaaacatgagatttcttaggattgtttttt 52080123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 33807733 - 33807686
Alignment:
Q  148 tgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctta 195  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||||    
T  33807733 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 33807686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 10660612 - 10660654
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  10660612 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa 10660654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 52079999 - 52080046
Alignment:
Q  65 tctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||| ||||||||||||| |||||||||| | ||||||||||||||||    
T  52079999 tctagtggtattcaaaatcattcaaattttgaaggattgtttaataaa 52080046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 539533 - 539491
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| |||||| |||||||||    
T  539533 tggtattcaaaatcattcaaatttcgaaggattatttaataaa 539491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 37454938 - 37454980
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| | ||||||||||||||    
T  37454938 tggtattcaaaatcattcaaatttcgaatgattgtttaataaa 37454980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 181
Target Start/End: Original strand, 20833069 - 20833178
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||  | |||||||||||||  ||||  ||||||||| ||||||||  |||||  || || ||||||| ||  |||||||    
T  20833069 tggtattcaaaatcattcaaattcggaaggattgtttaat--aaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagt 20833166  T
Q  170 ctttcgtgaaaa 181  Q
     |||| ||||||    
T  20833167 atttcatgaaaa 20833178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 39842569 - 39842501
Alignment:
Q  126 tagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    |||||||||  ||||||| ||||| ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  39842569 tagattttgacggattttgtaatgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 39842501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 38781 - 38599
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| |||||||||||||||   |||||||    
T  38781 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa---tcagatt 38685  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  38684 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 38599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 42786713 - 42786897
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  ||| |||    
T  42786713 gtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcatatt 42786810  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    ||||| |||||||| | |||||||| |||||||||| ||| |||||||||||| |||||||||||| |||||||| |||||||||||    
T  42786811 ttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattgttttttc 42786897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 25331160 - 25331343
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| || |||||||||| |||||||||||  ||||||||||||||||  |||||||    
T  25331160 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcaaaggattgtttaataaa--tcagatt 25331257  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  25331258 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 25331343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 70 - 207
Target Start/End: Complemental strand, 41881211 - 41881076
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||||||| |||||||    
T  41881211 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 41881114  T
Q  170 ctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||||||| |||||||  ||||||||||    
T  41881113 ctttcatgaaaacatgagatttcttaggattgtttttt 41881076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 1044836 - 1045019
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||  |||||| ||||| ||||||||||||||||  |||||||    
T  1044836 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaactttcgaaggattgtttaataaa--tcagatt 1044933  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| ||||||||| || |||||||  ||||||||||    
T  1044934 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttagaattgtttttt 1045019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 12112974 - 12113157
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||| ||| ||||||| ||       ||||||||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  12112974 gtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 12113071  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    || || |||||||| | |||||||| |||||||||||||| |||||||||||| |||||||||||| ||||||   ||||||||||    
T  12113072 ttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttgggattgtttttt 12113157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 195
Target Start/End: Original strand, 55302876 - 55303043
Alignment:
Q  26 tgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttga 125  Q
    ||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||    
T  55302876 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttga 55302973  T
Q  126 tagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctta 195  Q
    | ||| |||| |||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||    
T  55302974 tggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 55303043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 26 - 195
Target Start/End: Complemental strand, 32951009 - 32950842
Alignment:
Q  26 tgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttga 125  Q
    ||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||    
T  32951009 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttga 32950912  T
Q  126 tagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctta 195  Q
    |  ||||||| |||||||||| |||||||||||||| ||||| |||||| |||||||||||| |||||||    
T  32950911 tgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttctta 32950842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 34228718 - 34228577
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcatta 163  Q
    ||||| ||||||||||||| ||| |||||||| | ||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||||||| |    
T  34228718 gtctagtggtattcaaaatcattgaaatttcgaatgattgtttaataaa--tcagattttgatggattttgtaggattttctagtgaaattttagcatga 34228621  T
Q  164 aaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||||||||| |||||||||||| |||||||  ||||||||||    
T  34228620 aaaagtctttcatgaaaacatgagatttcttaagattgtttttt 34228577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 1112922 - 1113105
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||  | ||||||||||||||  |||||||    
T  1112922 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaa--tcagatt 1113019  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||| ||| | |||||||| ||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  1113020 ttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttt 1113105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 7007407 - 7007586
Alignment:
Q  26 tgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttga 125  Q
    ||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||    
T  7007407 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttga 7007504  T
Q  126 tagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    |  ||||||| |||||||||| |||||||||||||| ||||  | |||| |||||||||||| |||||||  ||||||||||    
T  7007505 tgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttcttaagattgtttttt 7007586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 70 - 207
Target Start/End: Complemental strand, 39479484 - 39479349
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| || |||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||||||  |||||||    
T  39479484 tggtattcaaaatcattcaaatttcgaagaattgtttaataaa--tcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagt 39479387  T
Q  170 ctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| ||||| |||||| |||||||  ||||||||||    
T  39479386 ctttcatgaaagcatgagatttcttaggattgtttttt 39479349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 22202044 - 22202227
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| ||| |||||||  | |||||||||||||| |  | |||    
T  22202044 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcaaaagattgtttaataaata--aaatt 22202141  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| ||||||||| || |||||||  ||||||||||    
T  22202142 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacattagatttcttagcattgtttttt 22202227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 26 - 207
Target Start/End: Complemental strand, 30009850 - 30009671
Alignment:
Q  26 tgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttga 125  Q
    ||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| ||| ||||||   | ||||||||||||||  |||||||||||    
T  30009850 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattttaaatgattgtttaataaa--tcagattttga 30009753  T
Q  126 tagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    | |||||||| |||||||||| | |||||||||||| |||||||||||| |||||||||||| |||||||  ||||||||||    
T  30009752 tggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttt 30009671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 3436623 - 3436805
Alignment:
Q  23 tcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattt 122  Q
    ||||||| |||| |||||||||| ||||||| ||        |||||||||||||||||| |||||||||||| ||||||||||||||||  ||||||||    
T  3436623 tcttgtgatattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattt 3436720  T
Q  123 tgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||  ||||||| ||||||| || |||||||||| ||| ||||||| |||| ||||||||| || |||||||  ||||||||||    
T  3436721 tgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttcttagaattgtttttt 3436805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 64 - 195
Target Start/End: Original strand, 41320881 - 41321010
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcatta 163  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||||| |||| ||||| ||||||||||| || |    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttgatggattttgtgggatgttctagtgaaattttagtatga 41320978  T
Q  164 aaaagtctttcgtgaaaacatgagctttctta 195  Q
    ||||||||||| | |||||||||| |||||||    
T  41320979 aaaagtctttcataaaaacatgagatttctta 41321010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 25446080 - 25446227
Alignment:
Q  23 tcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattt 122  Q
    |||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| | ||||||||||||||  ||||||||    
T  25446080 tcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaa--tcagattt 25446177  T
Q  123 tgatagattttgttggattttctaatgaaattttagcattaaaaagtctt 172  Q
    |||| |||||||| ||||||| || |||||||||||||| ||||||||||    
T  25446178 tgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcatta 163  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||||||| |    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttgatggattttgtgggattttctagtgaaattttagcatga 7249803  T
Q  164 aaaagtct 171  Q
    ||||||||    
T  7249802 aaaagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 28541727 - 28541874
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||| |||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| | ||||||||||||||  |||||||    
T  28541727 gtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaa--tcagatt 28541824  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtct 171  Q
    ||||| |||||||| | |||||||| |||||||||||||| |||||||||    
T  28541825 ttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 37046586 - 37046444
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaa-ttttagcatt 162  Q
    ||||| || |||| ||||| |||||||||||| ||||||||||||||||  |||||||||||| |||||||| | |||||||| ||||| |||||||||     
T  37046586 gtctagtgatatttaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttgatggattttgtggaattttctagtgaaaattttagcatg 37046489  T
Q  163 aaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    |||||||||||| |||||| ||||| |||||||  ||||||||||    
T  37046488 aaaaagtctttcatgaaaatatgagatttcttaggattgtttttt 37046444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 19741081 - 19740929
Alignment:
Q  26 tgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttga 125  Q
    ||||||||| | |||||||||||||||| ||       ||||  ||||||| ||||| |||||||||||| ||||||||||||||||  | |||||||||    
T  19741081 tgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaatttcgaaggattgtttaataaa--ttagattttga 19740984  T
Q  126 tagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaa 180  Q
    | |||||||| |||||||||| |||||||||||| | |||||||||||| |||||    
T  19740983 tggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 53275868 - 53276018
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||| ||||| |||||||| ||||||||| ||       ||||| || |||| ||||| |||||||||||| |||||||| |||||||  |||||||    
T  53275868 gtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtgtaataaa--tcagatt 53275965  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttc 174  Q
    ||||| ||||||||  ||||||||||| |||||||||||| ||||||||||||    
T  53275966 ttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttc 53276018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 46635819 - 46635642
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       || || | ||||||||||| |||||||||||| |||||||||||||||| |  |||||    
T  46635819 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattcaaatttcgaaggattgtttaataaata--agatt 46635722  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
          |||||||| ||||||| || |||||||||||||| |||||||||||| | |||||||||| |||||||  ||||||||||    
T  46635721 ------gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttt 46635642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 207
Target Start/End: Complemental strand, 24131097 - 24130975
Alignment:
Q  84 attcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcat-taaaaagtctttcgtgaaaac 182  Q
    |||||||||||| | ||||||||||||||  |||||||||||| |||||||| |||||||||| ||||||||||| ||  ||||| |||||| |||||||    
T  24131097 attcaaatttcgaatgattgtttaataaa--tcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaac 24131000  T
Q  183 atgagctttcttattattgtttttt 207  Q
    ||||| |||||||  ||||||||||    
T  24130999 atgagatttcttaggattgtttttt 24130975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 31314867 - 31314736
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcatta 163  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||||  ||||||||||          | |||||||||| |||||||||||||| |    
T  31314867 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagattttg----------tgggattttctagtgaaattttagcatga 31314780  T
Q  164 aaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||||||||| |||||||||||| |||||||  ||||||||||    
T  31314779 aaaagtctttcatgaaaacatgagatttcttaggattgtttttt 31314736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 5441433 - 5441603
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  5441433 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 5441530  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  5441531 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 5441603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 27768085 - 27768255
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  27768085 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 27768182  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  27768183 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 27768255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 54341173 - 54341343
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  54341173 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 54341270  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| ||||||    
T  54341271 ttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 54341343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 184
Target Start/End: Complemental strand, 27454207 - 27454095
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||| | | |||| |||||||||  ||||||||||||  ||||||| | |||||||| ||||||||| |||| |||||||    
T  27454207 tggtattcaaaatcattcaaattttgaaagattatttaataaa--tcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaagt 27454110  T
Q  170 ctttcgtgaaaacat 184  Q
    ||||| |||||||||    
T  27454109 ctttcatgaaaacat 27454095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 37828531 - 37828409
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||||||| |||||||| ||||||| || || |||||||  |  |||||||    
T  37828531 tggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagt 37828434  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  37828433 ctttcatgaaaagatgagatttctt 37828409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 207
Target Start/End: Original strand, 9163156 - 9163280
Alignment:
Q  73 tattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtctt 172  Q
    |||||||||| |||||||||||| |||||||||||||  |||| | |||||||| |||||||| | |||||||| |||||||||||||| ||            
T  9163156 tattcaaaatcattcaaatttcgaaggattgtttaat--aaattaaattttgatggattttgtggaattttctagtgaaattttagcatgaa-------- 9163245  T
Q  173 tcgtgaaaacatgagctttcttattattgtttttt 207  Q
    || |||||||||||| |||||||| ||||||||||    
T  9163246 tcatgaaaacatgagatttcttatgattgtttttt 9163280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 23465026 - 23465117
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaatttta 157  Q
    ||||| ||||||||||||  |||||||||||| |||||||||||||  |||||||| |||||| |||||||| |||||||||| | ||||||||    
T  23465026 gtctagtggtattcaaaaccattcaaatttcgaaggattgtttaat--aaatcagaatttgatggattttgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 25504815 - 25504696
Alignment:
Q  23 tcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattt 122  Q
    ||||||| |||| |||||||||| ||||||| ||       ||| | || |||||||||| |||||||||||| |||||||||||||  |||||||||||    
T  25504815 tcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaatttcgaaggattgtttaat--aaatcagattt 25504718  T
Q  123 tgatagattttgttggattttc 144  Q
    |||| |||||||| ||||||||    
T  25504717 tgatggattttgtgggattttc 25504696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 197
Target Start/End: Complemental strand, 44770983 - 44770857
Alignment:
Q  69 atggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaag 168  Q
    |||||||||||||| |||||||||| | |||||||||||||  ||||  ||||||| | |||||||| |||||||||| ||||||||||  |  ||||||    
T  44770983 atggtattcaaaatcattcaaattttgaaggattgtttaat--aaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaag 44770886  T
Q  169 tctttcgtgaaaacatgagctttcttatt 197  Q
    |||||| |||  ||||||| |||| ||||    
T  44770885 tctttcatgacgacatgagatttcatatt 44770857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 48261204 - 48261326
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||| | |||||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  ||||| |    
T  48261204 tggtattcaaaatcattcaaattttgaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaat 48261301  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  48261302 ctttcatgaaaatatgagatttctt 48261326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 54853597 - 54853475
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||  |||||||||||||  ||||  ||||||||| |||||||| ||||||| || || ||||||| ||  ||||| |    
T  54853597 tggtattcaaaattattcaaatttcaaaggattgtttaat--aaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaat 54853500  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  54853499 ctttcatgaaaagatgagatttctt 54853475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 51320950 - 51321120
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  51320950 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 51321047  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||| ||||||||   ||||| || || ||||||| ||  ||||||| |||| |||||| ||||| ||||||    
T  51321048 ttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttctt 51321120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 37915856 - 37916013
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||||||||||  ||||  ||||    
T  37915856 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattggatt 37915953  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaa 181  Q
    ||||| |||||||| ||||||| || || | ||||| ||  |||||||| ||| ||||||    
T  37915954 ttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaa 37916013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 11090437 - 11090515
Alignment:
Q  128 gattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttt 206  Q
    |||||||| ||||||| || ||||||||||||||||||||||||||  | |||||||||| |||||||  |||||||||    
T  11090437 gattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgttttt 11090515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 8711989 - 8712065
Alignment:
Q  118 gattttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||||||| |||||||| ||||||| || |||||||||||||  |||||||||||| | |||||||||| ||||||    
T  8711989 gattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttctt 8712065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 24736458 - 24736546
Alignment:
Q  118 gattttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttt 206  Q
    ||||||||| ||||||||  ||||||||| |||||||||| ||  || ||||||||| |||||||||||| |||||| | |||||||||    
T  24736458 gattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 195
Target Start/End: Complemental strand, 40537279 - 40537166
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| ||| |||||||| | |||||||||||  ||||| ||||||||| |||||||| |          |||||||||||||| |||||||    
T  40537279 tggtattcaaaatcatttaaatttcgaatgattgtttaat--aaatctgattttgatggattttgtgg----------tgaaattttagcatgaaaaagt 40537192  T
Q  170 ctttcgtgaaaacatgagctttctta 195  Q
    ||||| |||||||||||| |||||||    
T  40537191 ctttcatgaaaacatgagatttctta 40537166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 23987291 - 23987354
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgt 135  Q
    ||||||||||||| |||||||||||| |||||||||||||  |||| |||||||||| ||||||||    
T  23987291 tggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattagattttgatggattttgt 23987354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 32322168 - 32322290
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| |||||||||||||  ||||   |||||||| |||||||| ||||||| || || |||||||  |  |||| ||    
T  32322168 tggtattcaaaatcattcaaatttcgaaggattgtttaat--aaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgt 32322265  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| | |||| ||||| ||||||    
T  32322266 ctttcataaaaagatgagatttctt 32322290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 49834988 - 49834900
Alignment:
Q  24 cttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| ||||||||||||||||    
T  49834988 cttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 49834900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 32684117 - 32684075
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  32684117 tggtattcaaaatcattcaaatttcgaaggattgtttaataaa 32684075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 28483928 - 28484018
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| |||||| |||||||||    
T  28483928 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaa 28484018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 29649844 - 29649754
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||||| | ||||||||||||||    
T  29649844 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaa 29649754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 12913295 - 12913343
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  12913295 gtctcatggtattcaaaatcattcaaattttgaaggattgtttaataaa 12913343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 39307334 - 39307246
Alignment:
Q  120 ttttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    |||||||  ||||||| |||||||||| |||||||||| ||| ||||||| | |  | |||||||||| |||||||  |||||||||||    
T  39307334 ttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaacatgagatttcttagaattgttttttc 39307246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 56445475 - 56445432
Alignment:
Q  69 atggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||||||||||| |||||||||||| | ||||||||||||||    
T  56445475 atggtattcaaaatcattcaaatttcgaatgattgtttaataaa 56445432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 5800055 - 5800097
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||  ||||||||||||||||    
T  5800055 tggtattcaaaatcattcaaatttcaaaggattgtttaataaa 5800097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 28370995 - 28371086
Alignment:
Q  64 gtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaatttta 157  Q
    |||| |||||||||||||| ||||||||||   |||||||||||||  ||||   |||||| |  ||||||| |||||||||| ||||||||||    
T  28370995 gtctcatggtattcaaaatcattcaaattttaaaggattgtttaat--aaattgaattttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 30967428 - 30967386
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||  ||||||||||||||||    
T  30967428 tggtattcaaaatcattcaaatttcaaaggattgtttaataaa 30967386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 36479314 - 36479249
Alignment:
Q  128 gattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    ||||||| |||||||| || |||||||||||||  |||||||||||  |||||||||||| ||||||    
T  36479314 gattttgatggatttt-tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagatttctt 36479249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 36479360 - 36479318
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    ||||||||||||| |||||||||||| |||||| |||||||||    
T  36479360 tggtattcaaaattattcaaatttcgaaggattatttaataaa 36479318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 56445428 - 56445362
Alignment:
Q  128 gattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctt 194  Q
    |||||||| |||||||||| ||||| |||||||  |||||||||||| | || ||||||| ||||||    
T  56445428 gattttgtgggattttctagtgaaactttagcaagaaaaagtctttcataaagacatgagatttctt 56445362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 15210 - 15027
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||| ||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  15210 gtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 15113  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||  |||||||  ||||||||||    
T  15112 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttt 15027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 15853 - 15670
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||| ||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||    
T  15853 gtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaa--tcagatt 15756  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||  |||||||  ||||||||||    
T  15755 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttt 15670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 102125 - 102308
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||| | ||||||||||||||  |||||||    
T  102125 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaa--tcagatt 102222  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| |||||||| |||||||||| |||||||||||||| |||||||||||| | |||| ||||| |||||||| ||||||||||    
T  102223 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttcttatgattgtttttt 102308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 39072 - 38888
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||||| ||| |||||| ||||||| ||       ||||| || |||||||||| |||||||||| | ||||||||||||||||  |||||||    
T  39072 gtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaa--tcagatt 38975  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttttc 208  Q
    ||||| |||||||| |||||||||| ||||||||| |||| |||||||||||| |||||||||||| || ||||  |||||||||||    
T  38974 ttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattgttttttc 38888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 195
Target Start/End: Original strand, 100241 - 100412
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagatt 121  Q
    ||||||||||| | |||||||||| ||||||| ||       ||||| ||||||||||||| |||||||||||  ||||||||||||||||  ||| |||    
T  100241 gtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaa--tcaaatt 100338  T
Q  122 ttgatagattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttctta 195  Q
    ||||| |||||||| || ||||||| |||||||||| ||  |||||||||||| |||||||||||| |||||||    
T  100339 ttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttctta 100412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 70 - 195
Target Start/End: Complemental strand, 668 - 545
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||| | ||||||||||||||||  ||| |||||||| |||||||| | |||||||| ||||||||| | || |||||||    
T  668 tggtattcaaaatcattcaaatttggaaggattgtttaataaa--tcatattttgatggattttgtggaattttctagtgaaattttggtatgaaaaagt 571  T
Q  170 ctttcgtgaaaacatgagctttctta 195  Q
    ||||   ||||||||||| |||||||    
T  570 ctttgacgaaaacatgagatttctta 545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 10638 - 10760
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||  ||||||||||||||||  |   |||||||| |||||| | ||||||| || || ||||||| ||  |||||||    
T  10638 tggtattcaaaatcattcaaatttcaaaggattgtttaataaa--ttgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagt 10735  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  10736 ctttcatgaaaagatgagatttctt 10760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 39746 - 39624
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| ||||||| |||| |||||| |||||||||  |  ||||||||| |||||||| ||||||| || || ||||||| ||  |||||||    
T  39746 tggtattcaaaatcattcaaacttcgaaggattatttaataaa--ttggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 39649  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| || || ||||||    
T  39648 ctttcatgaaaagataagatttctt 39624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 37035 - 36914
Alignment:
Q  71 ggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagtc 170  Q
    |||||||||||| ||| |||||||| || |||||||||||||  |  ||||||||| |||||||| ||||||| || || ||||||| ||  ||||||||    
T  37035 ggtattcaaaatcattaaaatttcgaagcattgtttaataaa--ttggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 36938  T
Q  171 tttcgtgaaaacatgagctttctt 194  Q
    |||| |||||| || || ||||||    
T  36937 tttcatgaaaagataagatttctt 36914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 207
Target Start/End: Original strand, 942 - 1076
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| || ||| |||||||||    |||||||||| |||||||| ||||||| || || ||||||| |   |||||||    
T  942 tggtattcaaaatcattcaaatttcgaagaattatttaataaa---tagattttgatggattttgtgggattttgtagtgtaattttaactagaaaaagt 1038  T
Q  170 ctttcgtgaaaacatgagctttcttattattgtttttt 207  Q
    ||||| | |||| ||||| ||||||   ||||||||||    
T  1039 ctttcattaaaatatgagatttcttgagattgtttttt 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 58205 - 58083
Alignment:
Q  70 tggtattcaaaataattcaaatttcgcaggattgtttaataaaaatcagattttgatagattttgttggattttctaatgaaattttagcattaaaaagt 169  Q
    ||||||||||||| |||||||||||| | |||||||||||  ||||  ||||||||| |||||||| ||||||| || |  ||||||| ||  | ||| |    
T  58205 tggtattcaaaatcattcaaatttcgaatgattgtttaat--aaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaat 58108  T
Q  170 ctttcgtgaaaacatgagctttctt 194  Q
    ||||| |||||| ||||| ||||||    
T  58107 ctttcatgaaaagatgagatttctt 58083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 4230 - 4320
Alignment:
Q  22 gtcttgtggtatttaatcaagacttttaatcaattnnnnnnngtctaatggtattcaaaataattcaaatttcgcaggattgtttaataaa 112  Q
    |||||| |||||| ||||||||||||| |||| ||       ||||  ||||||||||||| |||||||||| | ||||||||||||||||    
T  4230 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaa 4320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 14894 - 14972
Alignment:
Q  128 gattttgttggattttctaatgaaattttagcattaaaaagtctttcgtgaaaacatgagctttcttattattgttttt 206  Q
    |||||||| ||||||| || || ||||||| ||  |||||||||||| |||||| ||||| |||||||  |||||||||    
T  14894 gattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgttttt 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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