View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10221_low_1 (Length: 433)

Name: NF10221_low_1
Description: NF10221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10221_low_1
NF10221_low_1
[»] chr3 (35 HSPs)
chr3 (1-417)||(55117154-55117570)
chr3 (308-396)||(45712410-45712498)
chr3 (308-396)||(31584682-31584771)
chr3 (303-395)||(20495299-20495389)
chr3 (308-396)||(40512337-40512425)
chr3 (323-392)||(34921168-34921236)
chr3 (308-389)||(50672632-50672713)
chr3 (308-396)||(46651177-46651265)
chr3 (331-398)||(33236769-33236836)
chr3 (308-395)||(34503644-34503730)
chr3 (306-395)||(40009306-40009395)
chr3 (308-396)||(40066589-40066678)
chr3 (308-396)||(40791348-40791436)
chr3 (333-396)||(4070529-4070592)
chr3 (333-396)||(24783181-24783244)
chr3 (308-395)||(29006901-29006988)
chr3 (308-383)||(29587098-29587173)
chr3 (308-383)||(33129336-33129411)
chr3 (333-395)||(20189555-20189616)
chr3 (311-384)||(25555467-25555540)
chr3 (333-395)||(40783440-40783502)
chr3 (306-396)||(45970747-45970837)
chr3 (308-396)||(9104000-9104088)
chr3 (308-396)||(22847920-22848008)
chr3 (308-353)||(31585333-31585378)
chr3 (308-396)||(35234839-35234928)
chr3 (308-353)||(40792416-40792461)
chr3 (308-353)||(55481338-55481382)
chr3 (333-396)||(13269208-13269269)
chr3 (308-396)||(20819220-20819307)
chr3 (308-395)||(36026969-36027057)
chr3 (307-395)||(40163037-40163124)
chr3 (309-353)||(42803226-42803270)
chr3 (308-399)||(45258714-45258806)
chr3 (331-395)||(55154142-55154206)
[»] chr2 (23 HSPs)
chr2 (307-396)||(28636101-28636190)
chr2 (308-396)||(39500266-39500354)
chr2 (319-395)||(7778530-7778606)
chr2 (308-396)||(27481238-27481327)
chr2 (308-396)||(34926070-34926158)
chr2 (316-386)||(3362698-3362767)
chr2 (310-396)||(18736637-18736722)
chr2 (307-396)||(9758283-9758371)
chr2 (308-396)||(3364064-3364151)
chr2 (306-395)||(122269-122358)
chr2 (307-396)||(15829908-15829996)
chr2 (336-396)||(10575108-10575168)
chr2 (308-383)||(14252636-14252709)
chr2 (308-395)||(28242613-28242701)
chr2 (333-396)||(10317665-10317727)
chr2 (333-395)||(7777485-7777547)
chr2 (308-353)||(7277800-7277845)
chr2 (308-396)||(17816237-17816325)
chr2 (308-396)||(20463698-20463787)
chr2 (308-384)||(22064677-22064753)
chr2 (301-353)||(27693845-27693897)
chr2 (333-396)||(29366569-29366633)
chr2 (308-384)||(45629919-45629995)
[»] chr4 (50 HSPs)
chr4 (308-396)||(34732548-34732636)
chr4 (308-396)||(1613445-1613533)
chr4 (319-396)||(21858491-21858568)
chr4 (319-396)||(21914354-21914431)
chr4 (308-396)||(36112245-36112333)
chr4 (306-395)||(55497273-55497361)
chr4 (308-396)||(24792527-24792615)
chr4 (305-396)||(53139976-53140067)
chr4 (308-396)||(55082433-55082520)
chr4 (308-395)||(30317558-30317645)
chr4 (306-384)||(13966694-13966772)
chr4 (310-395)||(6194908-6194993)
chr4 (319-396)||(25490232-25490309)
chr4 (308-396)||(26171677-26171765)
chr4 (308-395)||(28255147-28255235)
chr4 (308-395)||(13994521-13994608)
chr4 (333-392)||(18436412-18436470)
chr4 (308-395)||(22535197-22535283)
chr4 (308-395)||(23475129-23475216)
chr4 (333-395)||(25706139-25706201)
chr4 (306-353)||(31559030-31559077)
chr4 (333-396)||(35194893-35194956)
chr4 (333-388)||(36928479-36928534)
chr4 (333-396)||(40278268-40278330)
chr4 (333-396)||(52647423-52647485)
chr4 (307-353)||(1614984-1615030)
chr4 (306-384)||(6194119-6194196)
chr4 (333-395)||(30288681-30288743)
chr4 (308-396)||(36870097-36870186)
chr4 (319-396)||(48084023-48084101)
chr4 (333-394)||(6239131-6239192)
chr4 (333-394)||(6259835-6259896)
chr4 (308-396)||(6337070-6337159)
chr4 (318-383)||(6507488-6507551)
chr4 (308-353)||(7971922-7971967)
chr4 (308-384)||(10663793-10663868)
chr4 (308-384)||(10877938-10878013)
chr4 (308-353)||(15031880-15031925)
chr4 (308-396)||(21312199-21312287)
chr4 (308-353)||(23591297-23591342)
chr4 (308-396)||(44097656-44097744)
chr4 (308-353)||(48800470-48800515)
chr4 (363-396)||(53806725-53806758)
chr4 (308-396)||(56444226-56444314)
chr4 (308-396)||(23520100-23520185)
chr4 (308-384)||(26172468-26172543)
chr4 (333-389)||(29616742-29616797)
chr4 (308-396)||(39334424-39334510)
chr4 (308-396)||(54445578-54445665)
chr4 (333-396)||(56473801-56473865)
[»] chr7 (38 HSPs)
chr7 (309-395)||(36786641-36786727)
chr7 (333-398)||(28294264-28294329)
chr7 (308-400)||(33697351-33697444)
chr7 (308-384)||(11455417-11455493)
chr7 (308-396)||(22113870-22113957)
chr7 (308-388)||(26342596-26342676)
chr7 (308-396)||(40525484-40525571)
chr7 (308-395)||(21175961-21176048)
chr7 (333-395)||(37731621-37731683)
chr7 (308-384)||(21458608-21458682)
chr7 (308-396)||(33228591-33228679)
chr7 (307-396)||(42793779-42793867)
chr7 (308-388)||(44472847-44472926)
chr7 (333-396)||(45856509-45856570)
chr7 (308-384)||(48936155-48936230)
chr7 (333-396)||(24212330-24212393)
chr7 (333-384)||(44378814-44378865)
chr7 (333-384)||(44387681-44387732)
chr7 (306-396)||(38184170-38184260)
chr7 (331-396)||(40259591-40259657)
chr7 (319-389)||(45259670-45259739)
chr7 (323-396)||(2750292-2750365)
chr7 (333-394)||(6804934-6804995)
chr7 (308-353)||(15753371-15753416)
chr7 (308-385)||(34995628-34995704)
chr7 (331-384)||(37007078-37007131)
chr7 (319-383)||(5198236-5198300)
chr7 (341-396)||(17945835-17945891)
chr7 (308-396)||(21366241-21366329)
chr7 (333-389)||(21459522-21459578)
chr7 (308-396)||(31308240-31308325)
chr7 (309-353)||(34993642-34993686)
chr7 (333-396)||(39766844-39766908)
chr7 (332-395)||(41642270-41642334)
chr7 (333-389)||(43759510-43759566)
chr7 (308-384)||(47170991-47171067)
chr7 (320-396)||(48611298-48611374)
chr7 (308-384)||(48937224-48937300)
[»] chr6 (13 HSPs)
chr6 (308-396)||(34657803-34657892)
chr6 (308-395)||(15145776-15145863)
chr6 (308-353)||(14608051-14608096)
chr6 (306-384)||(11098926-11099004)
chr6 (307-400)||(13045613-13045707)
chr6 (308-396)||(5339869-5339956)
chr6 (308-383)||(32155343-32155418)
chr6 (333-395)||(20856738-20856800)
chr6 (308-353)||(1562895-1562940)
chr6 (308-353)||(1897206-1897251)
chr6 (308-353)||(23075390-23075435)
chr6 (308-395)||(15146567-15146655)
chr6 (333-389)||(34658537-34658593)
[»] chr5 (24 HSPs)
chr5 (308-396)||(5790535-5790622)
chr5 (308-388)||(26242777-26242855)
chr5 (308-396)||(36499239-36499327)
chr5 (333-396)||(29235477-29235540)
chr5 (333-396)||(38978442-38978505)
chr5 (333-395)||(4104982-4105044)
chr5 (308-396)||(1144403-1144492)
chr5 (308-389)||(27342040-27342121)
chr5 (308-396)||(33159872-33159961)
chr5 (327-396)||(40988907-40988975)
chr5 (307-396)||(41084208-41084297)
chr5 (308-384)||(9587508-9587584)
chr5 (308-395)||(2060582-2060669)
chr5 (307-382)||(4001152-4001227)
chr5 (333-396)||(13544581-13544644)
chr5 (306-384)||(4843659-4843737)
chr5 (330-396)||(10818355-10818421)
chr5 (308-353)||(6865434-6865479)
chr5 (319-384)||(6914138-6914202)
chr5 (319-384)||(17648399-17648464)
chr5 (308-389)||(32273155-32273236)
chr5 (308-396)||(746339-746426)
chr5 (309-353)||(6915464-6915508)
chr5 (333-389)||(41085364-41085419)
[»] chr1 (35 HSPs)
chr1 (316-396)||(29487294-29487372)
chr1 (306-384)||(45141465-45141543)
chr1 (308-396)||(16798260-16798349)
chr1 (308-396)||(6783128-6783215)
chr1 (307-395)||(13158840-13158928)
chr1 (309-396)||(11201899-11201986)
chr1 (308-391)||(31676436-31676519)
chr1 (331-389)||(31058691-31058749)
chr1 (319-396)||(7287552-7287629)
chr1 (308-353)||(8896920-8896965)
chr1 (308-396)||(32815091-32815180)
chr1 (308-396)||(44210088-44210176)
chr1 (308-396)||(46294437-46294526)
chr1 (308-389)||(52869658-52869739)
chr1 (308-396)||(16834365-16834452)
chr1 (308-384)||(24253138-24253214)
chr1 (333-396)||(28297319-28297383)
chr1 (316-396)||(32186325-32186403)
chr1 (333-400)||(1024215-1024282)
chr1 (308-395)||(51619409-51619496)
chr1 (333-395)||(25227430-25227492)
chr1 (319-396)||(36723295-36723372)
chr1 (307-396)||(44209100-44209190)
chr1 (308-353)||(1799816-1799861)
chr1 (319-395)||(4470246-4470323)
chr1 (308-396)||(18806631-18806720)
chr1 (308-396)||(21247547-21247635)
chr1 (308-353)||(36305119-36305164)
chr1 (363-395)||(10386892-10386924)
chr1 (308-388)||(13243011-13243091)
chr1 (309-389)||(17272907-17272987)
chr1 (333-396)||(45216775-45216839)
chr1 (333-396)||(48720792-48720856)
chr1 (308-396)||(48721525-48721612)
chr1 (331-383)||(52870683-52870735)
[»] chr8 (21 HSPs)
chr8 (308-395)||(14053188-14053275)
chr8 (308-396)||(44444809-44444896)
chr8 (307-385)||(12703936-12704014)
chr8 (308-395)||(24573272-24573359)
chr8 (308-383)||(43284982-43285057)
chr8 (308-401)||(38713363-38713457)
chr8 (333-389)||(5794606-5794662)
chr8 (333-397)||(10970421-10970485)
chr8 (308-396)||(11179996-11180082)
chr8 (308-396)||(32448942-32449028)
chr8 (333-396)||(12503186-12503249)
chr8 (308-395)||(17733931-17734018)
chr8 (333-384)||(20165974-20166025)
chr8 (333-396)||(20831815-20831877)
chr8 (308-395)||(39324460-39324547)
chr8 (308-353)||(23563880-23563923)
chr8 (308-396)||(3178556-3178644)
chr8 (308-384)||(9736109-9736186)
chr8 (308-396)||(15565624-15565713)
chr8 (320-396)||(17925259-17925336)
chr8 (308-384)||(2656814-2656890)
[»] scaffold0031 (1 HSPs)
scaffold0031 (308-393)||(95010-95094)
[»] scaffold0340 (1 HSPs)
scaffold0340 (333-396)||(2397-2459)
[»] scaffold0140 (1 HSPs)
scaffold0140 (322-384)||(4383-4445)
[»] scaffold0219 (1 HSPs)
scaffold0219 (363-396)||(22181-22214)
[»] scaffold0006 (2 HSPs)
scaffold0006 (320-353)||(41337-41370)
scaffold0006 (308-384)||(43425-43501)
[»] scaffold0004 (1 HSPs)
scaffold0004 (307-396)||(130880-130968)
[»] scaffold0036 (1 HSPs)
scaffold0036 (308-384)||(12291-12367)


Alignment Details
Target: chr3 (Bit Score: 323; Significance: 0; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 1 - 417
Target Start/End: Complemental strand, 55117570 - 55117154
Alignment:
Q  1 catttaaaatgacaatgcagcaacgttatgttgtttgatagaaaactttgttattgattgttaatttgtcctaccatattttgaaggattactctttgta 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55117570 catttaaaatgacaatgcagcaacgttaagttgtttgatagaaaactttgttattgattgttaatttgtcctaccatattttgaaggattactctttgta 55117471  T
Q  101 gtctcacaccacggatatccaatccagttnnnnnnnnnnnnnnnnnntgaatacccaaattaagtaaagatcgtgatattcgtatataagtaggaggatt 200  Q
    |||||||||||||||||||||||||||||                  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55117470 gtctcacaccacggatatccaatccagttaaaaaaaaacataaaaaatgaatacccaaattaagtaaagatcgtgatattcgtatataagtaggaggatt 55117371  T
Q  201 gggtttaatatacaacacaaattaaagtatatgatgagttacatatatgaccacagtaggtcttgtacggactgcaagttggcttcatgctcacaacaat 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  55117370 gggtttaatatacaacacaaattaaagtatatgatgagttacatatatgaccacagtaggtcttgtacggactgcaagttggcttcatgctcacagcaat 55117271  T
Q  301 agaagacgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattgaaca 400  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| | ||||||||||||    
T  55117270 agaagacgagtaaagagacaattatcctcttaaaattgtaagtttcgtcaatttatcttataaaattaacaaaatttcaattacttcttgaaattgaaca 55117171  T
Q  401 tgaagttttacaaatac 417  Q
    ||| |||||||||||||    
T  55117170 tgacgttttacaaatac 55117154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 45712410 - 45712498
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| |||||||||||||| | |||||||||||||||||||||  |  ||| |||||||||||| ||||||||| |||||||||||    
T  45712410 gagtaaatagacaattaccctcatgaaattgtaagtttcgtcaattacccccatgaaattaacaaaacttcaattaccccctgaaattg 45712498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 31584682 - 31584771
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||  | || | |||||||||||| |||||||| | |||||||||||    
T  31584682 gagtaaatagacaattatcctcataaaattgtaagtttcgtcaattatcttcttgaaattaacaaaacttcaattacccccctgaaattg 31584771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 395
Target Start/End: Original strand, 20495299 - 20495389
Alignment:
Q  303 aagacgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||||||||| || ||||| ||||||| |||||||||||||| |||| |||  || | |||||||||||||||||||||| ||||||||||    
T  20495299 aagacgagtaaatagtcaatttccctcttgaaattgtaagtttcatcaa-ttatctcctgaaattaacaaaatttcaattac-ccctgaaatt 20495389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 40512337 - 40512425
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatc-ataaaattaacaaaatttcaattactcc-ctgaaattg 396  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||| |||||||  |||||||||||||| ||||||||| || |||||||||    
T  40512337 gagtaaatagacaattaccctctgaaa-ttgtaagtttcgtcaa-ttacatctttaaaattaacaaaacttcaattacccctctgaaattg 40512425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 392
Target Start/End: Original strand, 34921168 - 34921236
Alignment:
Q  323 taccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaa 392  Q
    ||||||| ||||||||||||||||||||| ||||  | | |||||||||||||||||||||| |||||||    
T  34921168 taccctcctaaaattgtaagtttcgtcaa-ttactccttgaaattaacaaaatttcaattaccccctgaa 34921236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 389
Target Start/End: Complemental strand, 50672713 - 50672632
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccct 389  Q
    ||||||| || |||||| |||||| |||||||||||||||||||||  |  | | |||||||||||||||||||||| ||||    
T  50672713 gagtaaataggcaattatcctcttgaaattgtaagtttcgtcaattacccccctgaaattaacaaaatttcaattaccccct 50672632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 46651265 - 46651177
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||||||| | | |||||||||||||||||||||  |  | | |||||||||||| ||||||||| |||||||||||    
T  46651265 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaattaccccctgaaattg 46651177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 398
Target Start/End: Original strand, 33236769 - 33236836
Alignment:
Q  331 taaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattgaa 398  Q
    |||||||||| ||||||||||||  || | | |||||||||||| ||||||||| |||||||||||||    
T  33236769 taaaattgtaggtttcgtcaattaccaccctgaaattaacaaaacttcaattaccccctgaaattgaa 33236836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 395
Target Start/End: Complemental strand, 34503730 - 34503644
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||| |||||||||||| | | ||||| ||||||||||||| ||||  | | |||||||||||| ||||||||| ||||||||||    
T  34503730 gagtaaatagacaattacccccctgaaattttaagtttcgtcaa-ttactccctgaaattaacaaaacttcaattaccccctgaaatt 34503644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 395
Target Start/End: Original strand, 40009306 - 40009395
Alignment:
Q  306 acgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||||| ||| ||||| |||||| ||||| |||||||||||||||  |  | | |||||||||||| ||| ||||| ||||||||||    
T  40009306 acgagtaaatagataattatcctcttgaaattataagtttcgtcaattatccccctgaaattaacaaaacttcgattaccccctgaaatt 40009395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 40066678 - 40066589
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || ||||||||| | | |||||||||||||||||||||  |  | | |||||||||||| |||||||| |||||||||||||    
T  40066678 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaattatctccctgaaattg 40066589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 40791348 - 40791436
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || ||||||||||  | ||||||||||||||||||| |||| || | |||||||||||| |||||||| | |||||||||||    
T  40791348 gagtaaataggcaattacccttctgaaattgtaagtttcgtcaa-ttacctcctgaaattaacaaaacttcaattacccccctgaaattg 40791436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 396
Target Start/End: Complemental strand, 4070592 - 4070529
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattact-ccctgaaattg 396  Q
    |||||||| |||||||||||| || |||| |||||||||||| |||||||||| |||||||||||    
T  4070592 aaattgtaggtttcgtcaatt-acctcatgaaattaacaaaacttcaattactcccctgaaattg 4070529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 396
Target Start/End: Complemental strand, 24783244 - 24783181
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||||||||||||  | || | ||||||| |||| ||||||||| |||||||||||    
T  24783244 aaattgtaagtttcgtcaattaccttcctgaaattaataaaacttcaattaccccctgaaattg 24783181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 395
Target Start/End: Complemental strand, 29006988 - 29006901
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||| || ||||| ||| ||| |||||||||||||| ||||||  |  | | |||||||||||| ||||||||| ||||||||||    
T  29006988 gagtaaatagtcaatttcccccttgaaattgtaagtttcatcaattatccccctgaaattaacaaaacttcaattaccccctgaaatt 29006901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 383
Target Start/End: Original strand, 29587098 - 29587173
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta 383  Q
    ||||||| || ||||||||||| | |||||||||||||||||||||  | |  | |||||||||||| ||||||||    
T  29587098 gagtaaataggcaattaccctcctgaaattgtaagtttcgtcaattaccttattgaaattaacaaaacttcaatta 29587173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 383
Target Start/End: Complemental strand, 33129411 - 33129336
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta 383  Q
    ||||||| ||||||||| ||| |||| |||||||||||||||||||  | |  |||||||||||||| || |||||    
T  33129411 gagtaaatagacaattatccttttaagattgtaagtttcgtcaattacctttttaaaattaacaaaactttaatta 33129336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 20189616 - 20189555
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||||||||||| |||||| ||  | | |||||||||||| ||||||||||||||||||||    
T  20189616 aaattgtaagtttcatcaatt-accccctgaaattaacaaaacttcaattactccctgaaatt 20189555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 384
Target Start/End: Original strand, 25555467 - 25555540
Alignment:
Q  311 taaaaagacaatta-ccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||  | |  | ||||||||||||||||||||||    
T  25555467 taaatagacaattatccctct-aaaattgtaagtttcgtcaattacccttctgaaattaacaaaatttcaattac 25555540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 40783502 - 40783440
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||||||||||| ||||||  | || | |||||||||||| ||||||||| ||||||||||    
T  40783502 aaattgtaagtttcatcaattatcctcctgaaattaacaaaacttcaattaccccctgaaatt 40783440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 396
Target Start/End: Complemental strand, 45970837 - 45970747
Alignment:
Q  306 acgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||||| || ||||| || || | |||||||| ||||||||||||  |  | | |||||||||||| ||||||||| |||||||||||    
T  45970837 acgagtaaatagtcaatttccttcctgaaattgtaggtttcgtcaattaccccccttaaattaacaaaacttcaattaccccctgaaattg 45970747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 9104088 - 9104000
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || ||||||||| || ||| ||||||||||||||||||  |  | ||||||||||||||| ||||||| | |||||||||||    
T  9104088 gagtaaatagtcaattaccccctgaaa-ttgtaagtttcgtcaattacccccctaaaattaacaaaatgtcaattacccccctgaaattg 9104000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 22848008 - 22847920
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactc-cctgaaattg 396  Q
    ||||||| || ||||| ||||| | |||||||| |||||||||| ||||  ||| ||||||| |||| ||||||||||| ||||||||||    
T  22848008 gagtaaatagtcaatttccctcctcaaattgtaggtttcgtcaa-ttaccccatgaaattaataaaacttcaattactctcctgaaattg 22847920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 31585378 - 31585333
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || ||||||||| ||| |||||||||||||||||||||    
T  31585378 gagtaaataggcaattacccccttgaaattgtaagtttcgtcaatt 31585333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 35234839 - 35234928
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || ||||||||| | | |||||||||||||||||||||  |  | | |||||||||||| |||||||| | |||||||||||    
T  35234839 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattg 35234928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 40792461 - 40792416
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || ||||||||| ||| |||||||||||||||||||||    
T  40792461 gagtaaataggcaattacccccttgaaattgtaagtttcgtcaatt 40792416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 55481338 - 55481382
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||||    
T  55481338 gagtaaatagacaattacccccttaaa-ttgtaagtttcgtcaatt 55481382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 396
Target Start/End: Complemental strand, 13269269 - 13269208
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||||||||||||  | |||  ||||||| |||| ||||||||| |||||||||||    
T  13269269 aaattgtaagtttcgtcaattaccttca--aaattaataaaacttcaattaccccctgaaattg 13269208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 20819220 - 20819307
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || |||||||||||  ||| ||||||||||||||||||  | || | |||||||||||| | ||||||  |||||||||||    
T  20819220 gagtaaatagtcaattaccctccgaaa-ttgtaagtttcgtcaattaccctcttgaaattaacaaaactccaattatcccctgaaattg 20819307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 36026969 - 36027057
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaatt 395  Q
    ||||||| || ||||||||| | | |||||||||||||||||||||  |  | | |||||||||||| |||||||| | ||||||||||    
T  36026969 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattatccccctgaaatt 36027057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 395
Target Start/End: Original strand, 40163037 - 40163124
Alignment:
Q  307 cgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||||| || ||||| ||| | | |||||||||||||| |||||| ||  | | |||||||||||| ||||||||| ||||||||||    
T  40163037 cgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaatt-actccttgaaattaacaaaacttcaattaccccctgaaatt 40163124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 42803270 - 42803226
Alignment:
Q  309 agtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    |||||| | ||||||||||| || |||||||||||||||||||||    
T  42803270 agtaaataaacaattaccctattgaaattgtaagtttcgtcaatt 42803226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 399
Target Start/End: Complemental strand, 45258806 - 45258714
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattgaac 399  Q
    ||||||| || ||||||||  | | |||||||||||||||||||||  |  ||| ||||||||||||  ||||||| | ||||||||||||||    
T  45258806 gagtaaatagccaattacctccctgaaattgtaagtttcgtcaattacctccatgaaattaacaaaacgtcaattatccccctgaaattgaac 45258714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 55154206 - 55154142
Alignment:
Q  331 taaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||||||||||||| ||||||  |  | | |||||||||||| ||||||||| ||||||||||    
T  55154206 taaaattgtaagtttcatcaattatccccctgaaattaacaaaacttcaattaccccctgaaatt 55154142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 307 - 396
Target Start/End: Original strand, 28636101 - 28636190
Alignment:
Q  307 cgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||| || ||||||||| ||| |||||||||||||||||||||  | || ||||||||||||||| |||||||| |||||||||||    
T  28636101 cgagtaaacagtcaattacccccttgaaattgtaagtttcgtcaattaccttcctaaaattaacaaaatgtcaattaccccctgaaattg 28636190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 39500266 - 39500354
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||||||| | |||||||||||||||||||||||  |  ||||||||||||||||| |||||||| |||||||||||    
T  39500266 gagtaaatagtcaattacccccataaaattgtaagtttcgtcaattatctccataaaattaacaaaatgtcaattaccccctgaaattg 39500354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 395
Target Start/End: Complemental strand, 7778606 - 7778530
Alignment:
Q  319 caattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||| || ||| |||||||||||||||||||||  | || |||||||||||||||||||||||| ||||||||||    
T  7778606 caattaaccccttgaaattgtaagtttcgtcaattaccctcctaaaattaacaaaatttcaattaccccctgaaatt 7778530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 27481238 - 27481327
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || ||||| ||| |||||||||||||||||||||||||  |  ||| ||||||||||||||||||||| | |||||||||||    
T  27481238 gagtaaatagtcaatttcccccttaaaattgtaagtttcgtcaattacccccatgaaattaacaaaatttcaattacccccctgaaattg 27481327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 34926158 - 34926070
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||||||||||| |||||||||||||||||||||  |  | | |||||||||||| ||||||||| |||| ||||||    
T  34926158 gagtaaataggcaattaccctcttgaaattgtaagtttcgtcaattatcccctttaaattaacaaaacttcaattaccccctaaaattg 34926070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 3362698 - 3362767
Alignment:
Q  316 agacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactc 386  Q
    ||||||||||||  |||||||||||||||||||||| |||| |||| |||||||||||| || ||||||||    
T  3362698 agacaattacccctttaaaattgtaagtttcgtcaa-ttacctcatgaaattaacaaaactttaattactc 3362767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 396
Target Start/End: Original strand, 18736637 - 18736722
Alignment:
Q  310 gtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||| || ||||||| ||| | |||||||||||||||||||||  | || | |||||||||||||||||||||| |||||||||||    
T  18736637 gtaaataggcaattactctcctgaaattgtaagtttcgtcaattatcctc-tgaaattaacaaaatttcaattaccccctgaaattg 18736722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 396
Target Start/End: Original strand, 9758283 - 9758371
Alignment:
Q  307 cgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||| |||||||||||| | | ||||||||||||||||||| |||   | | |||||||||||| ||||||||| |||||||||||    
T  9758283 cgagtaaatagacaattacccccctgaaattgtaagtttcgtcaa-ttatcccctgaaattaacaaaacttcaattaccccctgaaattg 9758371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 3364151 - 3364064
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || |||||||| || | |||||||||||||||||||||  | || | |||||||||||| ||||||||| |||||||||||    
T  3364151 gagtaaataggcaattacc-tcctgaaattgtaagtttcgtcaattaccttcctgaaattaacaaaacttcaattaccccctgaaattg 3364064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 395
Target Start/End: Complemental strand, 122358 - 122269
Alignment:
Q  306 acgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||||| || ||||| ||||| | |||||||||||||| ||||||  |  | | |||||||||||| ||||||||| ||||||||||    
T  122358 acgagtaaatagtcaatttccctcctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccctgaaatt 122269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 396
Target Start/End: Original strand, 15829908 - 15829996
Alignment:
Q  307 cgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||| |||||||||||| || ||| ||||||||||||||||||  |  | | |||||||||||| ||||| ||| |||||||||||    
T  15829908 cgagtaaatagacaattaccccctgaaa-ttgtaagtttcgtcaattacccccctgaaattaacaaaacttcaactaccccctgaaattg 15829996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 10575168 - 10575108
Alignment:
Q  336 ttgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||| ||||||||||||| | |  |||||||||||||| ||||||||| |||||||||||    
T  10575168 ttgtaggtttcgtcaatttccctactaaaattaacaaaacttcaattaccccctgaaattg 10575108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 383
Target Start/End: Complemental strand, 14252709 - 14252636
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta 383  Q
    ||||||| || |||||| ||||  ||||||||||||||||||||||    | ||||||||||||||||||||||||    
T  14252709 gagtaaataggcaattatcctc--aaaattgtaagtttcgtcaattctttttataaaattaacaaaatttcaatta 14252636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 28242613 - 28242701
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaatt 395  Q
    ||||||| || ||||| || | || |||||||||||||| ||||||    || ||||||||||||||||||||||| ||||||||||||    
T  28242613 gagtaaataggcaatttcctttttgaaattgtaagtttcatcaattactctcctaaaattaacaaaatttcaattatctccctgaaatt 28242701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 396
Target Start/End: Complemental strand, 10317727 - 10317665
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||||||||| |||||||  | || | |||||||||||| |||||||||||||||||||||    
T  10317727 aaattgtaagttttgtcaattatcctc-tgaaattaacaaaaattcaattactccctgaaattg 10317665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 7777485 - 7777547
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||||||||||| ||||||  | || | |||||||||||| ||||||||| ||||||||||    
T  7777485 aaattgtaagtttcatcaattaccttcttgaaattaacaaaacttcaattaccccctgaaatt 7777547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 7277800 - 7277845
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || |||||| |||| |||||||||||||||||||||||    
T  7277800 gagtaaataggcaattaacctcctaaaattgtaagtttcgtcaatt 7277845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 17816325 - 17816237
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || ||||||||| || ||| ||||||||||||||||||  |  | ||||||||||||||| ||||||| | |||||||||||    
T  17816325 gagtaaatagtcaattaccccctgaaa-ttgtaagtttcgtcaattacccccttaaaattaacaaaatgtcaattacccccctgaaattg 17816237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 20463787 - 20463698
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || |||||| || ||| |||||||||||||| ||||||  |  | | |||||||||||| |||||||| |||||||||||||    
T  20463787 gagtaaataggcaattaaccccttgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaattacctccctgaaattg 20463698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 384
Target Start/End: Complemental strand, 22064753 - 22064677
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||| || ||||||||| ||| |||||||||||||| ||||||  |  | |||||||||| |||| ||||||||    
T  22064753 gagtaaatagtcaattacccccttgaaattgtaagtttcatcaattacccccctaaaattaacgaaatgtcaattac 22064677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 27693845 - 27693897
Alignment:
Q  301 agaagacgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    |||||| ||||||| |||||||||| ||   ||||||||||||||||||||||    
T  27693845 agaagaggagtaaatagacaattacacttccaaaattgtaagtttcgtcaatt 27693897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 396
Target Start/End: Complemental strand, 29366633 - 29366569
Alignment:
Q  333 aaattgtaagtttcgtcaatttac-atcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||||||||||||  | ||| | |||||||||||| ||||||||| | |||||||||    
T  29366633 aaattgtaagtttcgtcaattacctatcctgaaattaacaaaacttcaattaccctctgaaattg 29366569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 384
Target Start/End: Original strand, 45629919 - 45629995
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||| || ||||| ||| | |||||||||||||||| ||||||  |  | |||||||||||||| |||||||||    
T  45629919 gagtaaatagtcaatttcccccctaaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaattac 45629995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 34732548 - 34732636
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||||||||||| |||||||||||||| ||||||  |  | ||||||||||||||| |||||||| |||||||||||    
T  34732548 gagtaaatagtcaattaccctcttgaaattgtaagtttcttcaattacccccctaaaattaacaaaatgtcaattaccccctgaaattg 34732636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 1613445 - 1613533
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactcc-ctgaaattg 396  Q
    ||||||| || ||||||||||| | |||||||||||||| |||| |||| || |||||||||||||| ||||||||| || |||||||||    
T  1613445 gagtaaatagtcaattaccctcctgaaattgtaagtttcttcaa-ttacctcctaaaattaacaaaacttcaattacccctctgaaattg 1613533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 396
Target Start/End: Complemental strand, 21858568 - 21858491
Alignment:
Q  319 caattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||| ||||||||||||||||||||||||||||     | |||||||||||||| ||||||||| || ||||||||    
T  21858568 caattatcctcttaaaattgtaagtttcgtcaattactcccttaaaattaacaaaacttcaattaccccttgaaattg 21858491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 396
Target Start/End: Complemental strand, 21914431 - 21914354
Alignment:
Q  319 caattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||| ||||||||||||||||||||||||||||     | |||||||||||||| ||||||||| || ||||||||    
T  21914431 caattatcctcttaaaattgtaagtttcgtcaattactcccttaaaattaacaaaacttcaattaccccttgaaattg 21914354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 36112333 - 36112245
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||||  | || | |||||||||||| |||||||| | |||||||||||    
T  36112333 gagtaaatagacaattaccctctgaaa-ttgtaagtttcgtcaattaccttcctgaaattaacaaaacttcaattatccccctgaaattg 36112245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 395
Target Start/End: Complemental strand, 55497361 - 55497273
Alignment:
Q  306 acgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||||| |||||||||||| || ||| ||||||||||||||||||    || | ||||||||||||  |||||||||||||||||||    
T  55497361 acgagtaaatagacaattaccccctgaaa-ttgtaagtttcgtcaattactttcttgaaattaacaaaacgtcaattactccctgaaatt 55497273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 24792615 - 24792527
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| ||||||||| || ||| |||||||| ||||||||||||    || | |||||||||||| ||||||||| |||||||||||    
T  24792615 gagtaaatagacaattaaccccttgaaattgtatgtttcgtcaattactttcttgaaattaacaaaacttcaattaccccctgaaattg 24792527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 396
Target Start/End: Complemental strand, 53140067 - 53139976
Alignment:
Q  305 gacgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccc-tgaaattg 396  Q
    |||||||||| || ||||||||||| | ||||||||||||||||||| ||||  | | |||||||||||| ||||||||| ||| ||||||||    
T  53140067 gacgagtaaataggcaattaccctcctgaaattgtaagtttcgtcaa-ttaccccctgaaattaacaaaacttcaattacccccatgaaattg 53139976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 55082433 - 55082520
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||||||||||| ||||||||||||||||||| |||   | | |||||||||||| ||||||||| | |||||||||    
T  55082433 gagtaaatagtcaattaccctcttgaaattgtaagtttcgtcaa-ttatcccctgaaattaacaaaacttcaattaccctctgaaattg 55082520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 30317558 - 30317645
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||| || ||||||||| | | |||||||||||||||||||||  | || | |||||||||||| ||||||||  ||||||||||    
T  30317558 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaattaccctcctgaaattaacaaaacttcaattatcccctgaaatt 30317645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 384
Target Start/End: Original strand, 13966694 - 13966772
Alignment:
Q  306 acgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||||| || ||||||||| ||| |||||||||||||||||||||  |  | | |||||||||||| |||||||||    
T  13966694 acgagtaaataggcaattacccccttgaaattgtaagtttcgtcaattatccccctgaaattaacaaaacttcaattac 13966772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 395
Target Start/End: Complemental strand, 6194993 - 6194908
Alignment:
Q  310 gtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||| || ||||||||| | | |||||||||||||||||||||  |  | | |||||||||||| ||||||||| ||||||||||    
T  6194993 gtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattaccccctgaaatt 6194908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 396
Target Start/End: Complemental strand, 25490309 - 25490232
Alignment:
Q  319 caattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||||||| | |||||||||||||| ||||||  | || | ||||||| |||| ||||||||| |||||||||||    
T  25490309 caattaccctcctgaaattgtaagtttcatcaattaccctcctgaaattaagaaaacttcaattaccccctgaaattg 25490232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 26171677 - 26171765
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||||||| | | |||||||||||||||||||||  | || | ||||||| ||||  |||||||| |||||||||||    
T  26171677 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattaccctcttgaaattaataaaacgtcaattaccccctgaaattg 26171765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 28255147 - 28255235
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaatt 395  Q
    ||||||| || |||||  |||||| |||||||||||||| ||||||  || | | |||||||||||| |||||||| ||||||||||||    
T  28255147 gagtaaatagtcaattttcctcttgaaattgtaagtttcatcaattaccaccctgaaattaacaaaacttcaattacctccctgaaatt 28255235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 395
Target Start/End: Complemental strand, 13994608 - 13994521
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||| || ||||| ||| | | |||||||||||||| ||||||  |  | | |||||||||||||||||||||| ||||||||||    
T  13994608 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacctccctgaaattaacaaaatttcaattaccccctgaaatt 13994521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 18436412 - 18436470
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaa 392  Q
    |||||||||||||| |||||| || || | |||||||||||||||||||||| |||||||    
T  18436412 aaattgtaagtttcatcaatt-acctcctgaaattaacaaaatttcaattaccccctgaa 18436470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 22535197 - 22535283
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||| || ||||| ||| | | |||||||||||||| |||||| || |  | |||||||||||||||||||||| ||||||||||    
T  22535197 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaatt-actttctgaaattaacaaaatttcaattaccccctgaaatt 22535283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 23475129 - 23475216
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||| || ||||| ||| | | |||||||||||||| ||||||  | || | |||||||||||| ||||||||| ||||||||||    
T  23475129 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattatcctcctgaaattaacaaaacttcaattaccccctgaaatt 23475216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 25706201 - 25706139
Alignment:
Q  333 aaattgtaagtttcgtcaatt-tacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||||||||||||||||| | | || | |||||||||||| ||||||||||||||||||||    
T  25706201 aaattgtaagtttcgtcaattatccctc-tgaaattaacaaaacttcaattactccctgaaatt 25706139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 353
Target Start/End: Original strand, 31559030 - 31559077
Alignment:
Q  306 acgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||||| | |||||||||||| | |||||||||||||||||||||    
T  31559030 acgagtaaataaacaattaccctcctgaaattgtaagtttcgtcaatt 31559077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 396
Target Start/End: Complemental strand, 35194956 - 35194893
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||||||||||||  |  | | |||||||||||| ||||||||| |||||||||||    
T  35194956 aaattgtaagtttcgtcaattatccccctgaaattaacaaaacttcaattaccccctgaaattg 35194893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 388
Target Start/End: Complemental strand, 36928534 - 36928479
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccc 388  Q
    |||||||||||||||||||||  |  | |||||||||||||| |||||||||||||    
T  36928534 aaattgtaagtttcgtcaattacctccctaaaattaacaaaacttcaattactccc 36928479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 40278268 - 40278330
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||| |||||||||||| || |||| |||||||||||| ||||||||  |||||||||||    
T  40278268 aaattgtaggtttcgtcaatt-acctcatgaaattaacaaaacttcaattatcccctgaaattg 40278330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 52647423 - 52647485
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||||||||||||||||| ||  |  ||||||||||||| ||||||||| |||||||||||    
T  52647423 aaattgtaagtttcgtcaatt-accccccaaaattaacaaaacttcaattacgccctgaaattg 52647485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 353
Target Start/End: Complemental strand, 1615030 - 1614984
Alignment:
Q  307 cgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    |||||||| || ||||||||| | |||||||||||||||||||||||    
T  1615030 cgagtaaatagtcaattacccccataaaattgtaagtttcgtcaatt 1614984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 384
Target Start/End: Original strand, 6194119 - 6194196
Alignment:
Q  306 acgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||||| || |||||||||||| ||| ||||||||||| ||||||  || | | |||||||||||| |||||||||    
T  6194119 acgagtaaataggcaattaccctctgaaa-ttgtaagtttcatcaattaccaccctgaaattaacaaaacttcaattac 6194196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 30288681 - 30288743
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||||||||||||||||||  | || | |||||||||||| ||||||||  ||||||||||    
T  30288681 aaattgtaagtttcgtcaattaccctcctgaaattaacaaaacttcaattatcccctgaaatt 30288743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 36870097 - 36870186
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatca-taaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| |||||||||||| | | ||||||||||||||||||| ||||  || | |||||||||||| |||||||| | |||||||||||    
T  36870097 gagtaaatagacaattacccccctgaaattgtaagtttcgtcaa-ttaccccactgaaattaacaaaacttcaattacccccctgaaattg 36870186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 396
Target Start/End: Complemental strand, 48084101 - 48084023
Alignment:
Q  319 caattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactcc-ctgaaattg 396  Q
    |||||| ||| || |||||||||||||||||||||  | |  | |||||||||||||||||||||| || |||||||||    
T  48084101 caattatccttttgaaattgtaagtttcgtcaattacccttctgaaattaacaaaatttcaattacacctctgaaattg 48084023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 394
Target Start/End: Complemental strand, 6239192 - 6239131
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaat 394  Q
    |||||||||||||| ||||||  | || | |||||||||||| ||||||||| |||||||||    
T  6239192 aaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattaccccctgaaat 6239131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 394
Target Start/End: Complemental strand, 6259896 - 6259835
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaat 394  Q
    |||||||||||||| ||||||  | || | |||||||||||| ||||||||| |||||||||    
T  6259896 aaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattaccccctgaaat 6259835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 6337159 - 6337070
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || ||||||| | | | |||||||||||||||||||||  | || | |||||||||||| |||||||| | |||||||||||    
T  6337159 gagtaaagagtcaattactcccctgaaattgtaagtttcgtcaattatcctccttaaattaacaaaacttcaattatccccctgaaattg 6337070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 6507488 - 6507551
Alignment:
Q  318 acaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta 383  Q
    |||||||||| ||||||||||||||||||||||| |||  || | ||||||| |||||||||||||    
T  6507488 acaattaccc-cttaaaattgtaagtttcgtcaa-ttatttcttgaaattaataaaatttcaatta 6507551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 7971922 - 7971967
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || ||||||||||| | |||||||||||||||||||||    
T  7971922 gagtaaataggcaattaccctcctgaaattgtaagtttcgtcaatt 7971967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 384
Target Start/End: Complemental strand, 10663868 - 10663793
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacat-cataaaattaacaaaatttcaattac 384  Q
    ||||||| || |||||||| |||| ||||||||||||||||||| |||| | ||| |||||||||||| |||||||||    
T  10663868 gagtaaataggcaattacc-tcttgaaattgtaagtttcgtcaa-ttacttccatgaaattaacaaaacttcaattac 10663793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 384
Target Start/End: Complemental strand, 10878013 - 10877938
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacat-cataaaattaacaaaatttcaattac 384  Q
    ||||||| || |||||||| |||| ||||||||||||||||||| |||| | ||| |||||||||||| |||||||||    
T  10878013 gagtaaataggcaattacc-tcttgaaattgtaagtttcgtcaa-ttacttccatgaaattaacaaaacttcaattac 10877938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 15031925 - 15031880
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || ||||||||| | |||||||||||||||||||||||    
T  15031925 gagtaaataggcaattacccccctaaaattgtaagtttcgtcaatt 15031880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 21312287 - 21312199
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || ||||||||| ||| |||||||||||||||| || ||||  | | |||||||||||| |||||||| | |||||||||||    
T  21312287 gagtaaataggcaattacccccttgaaattgtaagtttcgttaa-ttaccccctgaaattaacaaaacttcaattacccccctgaaattg 21312199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 23591342 - 23591297
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || ||||||||| | |||||||||||||||||||||||    
T  23591342 gagtaaataggcaattacccccctaaaattgtaagtttcgtcaatt 23591297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 44097656 - 44097744
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacat-cataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || |||||||||  ||||||||||||||||| || | |||||| | ||||||||||||||  |||||||| ||| |||||||    
T  44097656 gagtaaataggcaattacccctttaaaattgtaagtttcatc-agttacatccttaaaattaacaaaacgtcaattaccccccgaaattg 44097744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 48800515 - 48800470
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || ||||||||||| | |||||||||||||||||||||    
T  48800515 gagtaaatagtcaattaccctcctgaaattgtaagtttcgtcaatt 48800470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 396
Target Start/End: Complemental strand, 53806758 - 53806725
Alignment:
Q  363 aaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||| |||||||||||||||||||||    
T  53806758 aaattaacaaaacttcaattactccctgaaattg 53806725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 56444314 - 56444226
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccc-tgaaattg 396  Q
    ||||||| || ||||||||||| | |||||||||||||  |||||| ||  | | |||||||||||| ||||||||||||| ||||||||    
T  56444314 gagtaaatagtcaattaccctcctgaaattgtaagttttatcaatt-accccctgaaattaacaaaacttcaattactcccatgaaattg 56444226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 23520185 - 23520100
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||||||| || ||| ||||||||||| |||||| ||  | |||||||||||||| ||||||||| |||||||||||    
T  23520185 gagtaaataggcaattaccccctgaaa-ttgtaagtttcatcaatt-acgccctaaaattaacaaaacttcaattac-ccctgaaattg 23520100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 384
Target Start/End: Complemental strand, 26172543 - 26172468
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||| || ||||||||| ||| |||||||||||||||||||||  |  | ||||||||||||||  ||||||||    
T  26172543 gagtaaatagtcaattaccc-cttgaaattgtaagtttcgtcaattacccccctaaaattaacaaaaagtcaattac 26172468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 29616742 - 29616797
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccct 389  Q
    ||||||||||||||||||||| ||  | | | |||||||||||||||||||||||||    
T  29616742 aaattgtaagtttcgtcaatt-accccctgatattaacaaaatttcaattactccct 29616797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 39334510 - 39334424
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||||||| || ||| ||||||||||||||||||  |  | | |||||||||||| ||||||||| |||||||||||    
T  39334510 gagtaaataggcaattaccccctgaaa-ttgtaagtttcgtcaattatccacctgaaattaacaaaacttcaattac-ccctgaaattg 39334424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 54445665 - 54445578
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||| ||| ||| |||||||||||||||||||||  |  | | |||||||||||| ||||||||| || ||||||||    
T  54445665 gagtaaatagtcaatttccc-cttgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattaccccttgaaattg 54445578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 396
Target Start/End: Complemental strand, 56473865 - 56473801
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattact-ccctgaaattg 396  Q
    ||||||||||||| |||||||  |  | | ||||||||||||||||||||||| |||||||||||    
T  56473865 aaattgtaagttttgtcaattacccccctgaaattaacaaaatttcaattactcccctgaaattg 56473801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 395
Target Start/End: Original strand, 36786641 - 36786727
Alignment:
Q  309 agtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||| || ||||||||||||| |||||||||||||| ||||||  | |  | |||||||||||||||||||||| ||||||||||    
T  36786641 agtaaatagtcaattaccctcttgaaattgtaagtttcatcaattacctttctgaaattaacaaaatttcaattaccccctgaaatt 36786727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 398
Target Start/End: Original strand, 28294264 - 28294329
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattgaa 398  Q
    |||||||||||||||||||||  |  | |||||||||||||| ||||||||| |||||||||||||    
T  28294264 aaattgtaagtttcgtcaattacccccctaaaattaacaaaacttcaattaccccctgaaattgaa 28294329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 400
Target Start/End: Complemental strand, 33697444 - 33697351
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccc-tgaaattgaaca 400  Q
    ||||||| || ||||||| | | | |||||||||||||||||||||  |  | | |||||||||||||||||||||||||| ||||||||||||    
T  33697444 gagtaaataggcaattactcccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaatttcaattactcccttgaaattgaaca 33697351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 384
Target Start/End: Original strand, 11455417 - 11455493
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||| || ||||||||||| | |||||||||||||||||||||  |  ||| |||||||||||| |||||||||    
T  11455417 gagtaaataggcaattaccctcctgaaattgtaagtttcgtcaattacccccatgaaattaacaaaacttcaattac 11455493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 22113870 - 22113957
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||||||| | | |||||||||||||||||||||  ||   | |||||||||||||||||||||| |||||||||||    
T  22113870 gagtaaataggcaattaccc-catgaaattgtaagtttcgtcaattaccactttgaaattaacaaaatttcaattaccccctgaaattg 22113957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 388
Target Start/End: Original strand, 26342596 - 26342676
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccc 388  Q
    ||||||| || ||||| ||||||| |||||||||||||| ||||||  | || | |||||||||||| |||||||||||||    
T  26342596 gagtaaatagtcaatttccctcttgaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattactccc 26342676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 40525571 - 40525484
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||||||| | | |||||||||||||||||||||  ||   | |||||||||||||||||||||| |||||||||||    
T  40525571 gagtaaataggcaattaccc-catgaaattgtaagtttcgtcaattaccactttgaaattaacaaaatttcaattaccccctgaaattg 40525484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 21175961 - 21176048
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||| || ||||| ||| |||||||||||||||||| ||||||  |  | | |||||||||||| ||||||||| ||||||||||    
T  21175961 gagtaaatagtcaatttcccccttaaaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaattaccccctgaaatt 21176048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 37731683 - 37731621
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||||| ||||||||||||  | || | |||||||||||||||||||||| ||||||||||    
T  37731683 aaattgtaggtttcgtcaattaccctcctgaaattaacaaaatttcaattaccccctgaaatt 37731621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 384
Target Start/End: Original strand, 21458608 - 21458682
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||| ||||||||||||   | |||||||||||||||||||||  |||| | |||||||||||| |||||||||    
T  21458608 gagtaaatagacaattacccc--tgaaattgtaagtttcgtcaattaccatcctgaaattaacaaaacttcaattac 21458682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 33228679 - 33228591
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || ||||||||| || ||| ||||||||||||||||||  | |||| |||||||||||| |||||||| |||| ||||||||    
T  33228679 gagtaaataggcaattaccccctgaaa-ttgtaagtttcgtcaattaccctcatgaaattaacaaaacttcaattacctccttgaaattg 33228591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 396
Target Start/End: Original strand, 42793779 - 42793867
Alignment:
Q  307 cgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||| |||||||| | | | ||||||||||||||||||||| ||||  ||| | |||||||||| |||||||||||| | ||||||    
T  42793779 cgagtaaatagacaatttctcccctaaaattgtaagtttcgtcaa-ttaccccatgatattaacaaaacttcaattactccttcaaattg 42793867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 388
Target Start/End: Complemental strand, 44472926 - 44472847
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccc 388  Q
    ||||||| || |||||||||||   ||||||||||||||||||| ||||  | | |||||||||||| |||||||||||||    
T  44472926 gagtaaataggcaattaccctccagaaattgtaagtttcgtcaa-ttaccccctgaaattaacaaaacttcaattactccc 44472847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 45856509 - 45856570
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||||||||||||  |||  |||||||||||||| ||||||||| || ||||||||    
T  45856509 aaattgtaagtttcgtcaattatcat--taaaattaacaaaacttcaattaccccatgaaattg 45856570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 384
Target Start/End: Original strand, 48936155 - 48936230
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||| ||||||||||| || | |||||||||||||| |||| |||| | || |||||||||||| |||||||||    
T  48936155 gagtaaatagacaattaccttcctgaaattgtaagtttcatcaa-ttaccttatgaaattaacaaaacttcaattac 48936230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 24212330 - 24212393
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||||||||||||  |  | | |||||||||||||||||||||| || ||||||||    
T  24212330 aaattgtaagtttcgtcaattacccccttgaaattaacaaaatttcaattaccccttgaaattg 24212393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 44378814 - 44378865
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||||||||||||||||| || || ||||| ||||||||| ||||||||    
T  44378814 aaattgtaagtttcgtcaattaacctcctaaaagtaacaaaatgtcaattac 44378865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 44387681 - 44387732
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||||||||||||||||| || || ||||| ||||||||| ||||||||    
T  44387681 aaattgtaagtttcgtcaattaacctcctaaaagtaacaaaatgtcaattac 44387732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 396
Target Start/End: Original strand, 38184170 - 38184260
Alignment:
Q  306 acgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||||| || |||||  || ||| |||||||| ||||||||||||  ||   | |||||||||||| ||||||||| |||||||||||    
T  38184170 acgagtaaatagtcaattttccccttgaaattgtaggtttcgtcaattaccacattgaaattaacaaaacttcaattaccccctgaaattg 38184260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 396
Target Start/End: Original strand, 40259591 - 40259657
Alignment:
Q  331 taaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    |||||||||| ||||||||||||  | || |||||||||||||| |||||||| | |||||||||||    
T  40259591 taaaattgtaggtttcgtcaattatcctcttaaaattaacaaaacttcaattatccccctgaaattg 40259657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 389
Target Start/End: Complemental strand, 45259739 - 45259670
Alignment:
Q  319 caattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccct 389  Q
    ||||||||| ||| |||||||||||||||||||||  |  | ||||||||||||||| |||||||| ||||    
T  45259739 caattaccc-cttgaaattgtaagtttcgtcaattatccccctaaaattaacaaaatgtcaattaccccct 45259670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 396
Target Start/End: Original strand, 2750292 - 2750365
Alignment:
Q  323 taccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||| ||| |||||||||||||||||||||  |  | | ||||||| |||| ||||||||| |||||||||||    
T  2750292 tacccccttgaaattgtaagtttcgtcaattatccccctgaaattaataaaacttcaattaccccctgaaattg 2750365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 394
Target Start/End: Complemental strand, 6804995 - 6804934
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaat 394  Q
    |||||||||||||| ||||||  | || | |||||||||||| ||||||||| |||||||||    
T  6804995 aaattgtaagtttcatcaattatcctcctgaaattaacaaaacttcaattaccccctgaaat 6804934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 15753416 - 15753371
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || ||||||||||| |||||||||||||||||| ||||    
T  15753416 gagtaaataggcaattaccctcctaaaattgtaagtttcgttaatt 15753371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 385
Target Start/End: Complemental strand, 34995704 - 34995628
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattact 385  Q
    ||||||| ||||||||||| || | |||||||||||||| ||||||  | || | |||||||||||| ||||||||||    
T  34995704 gagtaaatagacaattacc-tcctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattact 34995628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 37007078 - 37007131
Alignment:
Q  331 taaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    |||||||||||||||| ||||||    || ||||||||||||||||||||||||    
T  37007078 taaaattgtaagtttcatcaattactttcttaaaattaacaaaatttcaattac 37007131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 383
Target Start/End: Original strand, 5198236 - 5198300
Alignment:
Q  319 caattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta 383  Q
    ||||||||| ||| |||||||||||||||| |||   | || | |||||||||||||||||||||    
T  5198236 caattacccccttgaaattgtaagtttcgttaatcaccctcttgaaattaacaaaatttcaatta 5198300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 396
Target Start/End: Original strand, 17945835 - 17945891
Alignment:
Q  341 agtttcgtcaatttacatcataaaattaacaaaatttcaattactcc-ctgaaattg 396  Q
    ||||||||| ||| || || ||||||||||||||||||||||| ||| |||||||||    
T  17945835 agtttcgtcgattaacctcttaaaattaacaaaatttcaattattcctctgaaattg 17945891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 21366241 - 21366329
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || |||||  || ||||||||||||  |||||||||||  | || | |||||||||||| ||||||||| | |||||||||    
T  21366241 gagtaaatagtcaattttccccttaaaattgtagatttcgtcaattaccctcctgaaattaacaaaacttcaattaccctctgaaattg 21366329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 21459578 - 21459522
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccct 389  Q
    |||||||||||||||||||||  | || | |||||||||||| ||||||||| ||||    
T  21459578 aaattgtaagtttcgtcaattaccctcctgaaattaacaaaacttcaattaccccct 21459522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 31308240 - 31308325
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| ||||||||||| ||  |||||||||||||| ||||||| || || | | ||||||||||||||||||||  ||||||||||    
T  31308240 gagtaaatagacaattacc-tcccaaaattgtaagttttgtcaatt-acctc-tgacattaacaaaatttcaattacctcctgaaattg 31308325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 353
Target Start/End: Original strand, 34993642 - 34993686
Alignment:
Q  309 agtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    |||||| ||||||||| |||| | |||||||||||||||||||||    
T  34993642 agtaaatagacaattatcctcatgaaattgtaagtttcgtcaatt 34993686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 39766844 - 39766908
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccc-tgaaattg 396  Q
    |||||||| ||||||||||||  | |||| |||||||||||| ||||||||| ||| ||||||||    
T  39766844 aaattgtaggtttcgtcaattaccctcatgaaattaacaaaacttcaattacccccatgaaattg 39766908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 395
Target Start/End: Complemental strand, 41642334 - 41642270
Alignment:
Q  332 aaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaatt 395  Q
    |||||| |||||||| ||||||  | || | ||||||||||||||||||||| ||||||||||||    
T  41642334 aaaattataagtttcatcaattaccctcctgaaattaacaaaatttcaattacctccctgaaatt 41642270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 43759510 - 43759566
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccct 389  Q
    |||||||||||||||||||||  |  | | |||||||||||| ||||||||||||||    
T  43759510 aaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattactccct 43759566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 384
Target Start/End: Complemental strand, 47171067 - 47170991
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||| || ||||| ||| | | |||||||||||||| |||||| || || | |||||||||||| |||||||||    
T  47171067 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattaacctcctgaaattaacaaaacttcaattac 47170991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 396
Target Start/End: Complemental strand, 48611374 - 48611298
Alignment:
Q  320 aattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||| | |||||||||||||||||||||    |||| ||||||||||||| | || |||  ||||||||||    
T  48611374 aattaccctcctgaaattgtaagtttcgtcaattactttcatgaaattaacaaaatgttaactacctcctgaaattg 48611298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 384
Target Start/End: Complemental strand, 48937300 - 48937224
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||| || ||||||| | ||| |||||||||||||||||||||  | ||   |||||||||||| |||||||||    
T  48937300 gagtaaataggcaattactcccttgaaattgtaagtttcgtcaattatcctcccgaaattaacaaaacttcaattac 48937224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 34657803 - 34657892
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccc-tgaaattg 396  Q
    ||||||| || ||||||||| ||| |||||||||||||||||||||  |  | ||||||||||||||| |||||||||||| ||||||||    
T  34657803 gagtaaatagtcaattacccccttgaaattgtaagtttcgtcaattacccgcctaaaattaacaaaatgtcaattactcccgtgaaattg 34657892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 15145776 - 15145863
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||| || ||||| |||  || |||||||||||||| ||||||  | |||| |||||||||||||||||||||| ||||||||||    
T  15145776 gagtaaatagtcaatttcccctttgaaattgtaagtttcatcaattaccctcatgaaattaacaaaatttcaattaccccctgaaatt 15145863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 14608051 - 14608096
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  14608051 gagtaaatagacaattaccctcttgaaattgtaagtttcgtcaatt 14608096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 384
Target Start/End: Original strand, 11098926 - 11099004
Alignment:
Q  306 acgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||||| || ||||||||| ||| |||||||||||||||||||||  |  |   ||||||||||||||||||||||    
T  11098926 acgagtaaatagtcaattacccccttgaaattgtaagtttcgtcaattaccccccagaaattaacaaaatttcaattac 11099004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 400
Target Start/End: Original strand, 13045613 - 13045707
Alignment:
Q  307 cgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattgaaca 400  Q
    |||||||| || ||||| ||| |||||||||||||||||  |||||| ||    |||||||||||||| |||||||| |||||||||||| ||||    
T  13045613 cgagtaaatagtcaatttcccccttaaaattgtaagttttatcaattaaccctctaaaattaacaaaacttcaattacctccctgaaatttaaca 13045707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 5339869 - 5339956
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| |||||||| |||||| ||| ||||||||||||||||||  || | | |||||||||||| |||||| || | |||||||||    
T  5339869 gagtaaatagacaatttccctctgaaa-ttgtaagtttcgtcaattaccaccgtgaaattaacaaaacttcaatcaccctctgaaattg 5339956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 383
Target Start/End: Complemental strand, 32155418 - 32155343
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta 383  Q
    ||||||| || ||||||||||| | |||||||||||| ||||||||  |  ||| |||||||||||| ||||||||    
T  32155418 gagtaaataggcaattaccctcctgaaattgtaagttccgtcaattgcccccatgaaattaacaaaacttcaatta 32155343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 20856738 - 20856800
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||||||||||| ||||||  | || | |||||||||||| ||||||||| ||||||||||    
T  20856738 aaattgtaagtttcatcaattatcctcctgaaattaacaaaacttcaattaccccctgaaatt 20856800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 1562895 - 1562940
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || ||||||||||| |||||||||||||||||| ||||    
T  1562895 gagtaaataggcaattaccctcctaaaattgtaagtttcgttaatt 1562940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 1897251 - 1897206
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || |||||| |||||| |||||||||||||||||||||    
T  1897251 gagtaaataggcaattatcctcttgaaattgtaagtttcgtcaatt 1897206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 23075435 - 23075390
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || ||||||||| | |||||||||||||||||||||||    
T  23075435 gagtaaataggcaattacccccctaaaattgtaagtttcgtcaatt 23075390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 395
Target Start/End: Complemental strand, 15146655 - 15146567
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaatt 395  Q
    ||||||| || ||||| ||| | | |||||||||||||| ||||||  |  | |||||||||||||| |||||||| ||||||||||||    
T  15146655 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaattacctccctgaaatt 15146567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 34658593 - 34658537
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccct 389  Q
    |||||||||||||||||||||  |||| | ||||||||||||  |||||||| ||||    
T  34658593 aaattgtaagtttcgtcaattatcatcttgaaattaacaaaacgtcaattaccccct 34658537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 5790622 - 5790535
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| |||||||||||||| | ||||||||||||||||||| ||||  | | |||||||||||| ||||||||| || ||||||||    
T  5790622 gagtaaatagacaattaccctcctgaaattgtaagtttcgtcaa-ttactccctgaaattaacaaaacttcaattaccccttgaaattg 5790535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 388
Target Start/End: Original strand, 26242777 - 26242855
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccc 388  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||| ||  ||| |  ||||||||| |||||||||||||    
T  26242777 gagtaaatagacaattaccc-cttaaaattgtaagtttcgtcaatt-accccatgacgttaacaaaacttcaattactccc 26242855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 36499327 - 36499239
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||| ||||| | |||||||||||||||||||||  |  | | |||||||||||| ||||||||| |||||||||||    
T  36499327 gagtaaatagtcaatttccctcctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattaccccctgaaattg 36499239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 29235477 - 29235540
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||||||||||||  | || | |||||||||||| ||||||||| |||||||||||    
T  29235477 aaattgtaagtttcgtcaattaccctcctgaaattaacaaaacttcaattaccccctgaaattg 29235540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 396
Target Start/End: Complemental strand, 38978505 - 38978442
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||||||||||||  |  | |||||||||||||| ||||||||| |||||||||||    
T  38978505 aaattgtaagtttcgtcaattacccccctaaaattaacaaaacttcaattaccccctgaaattg 38978442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 4105044 - 4104982
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||||||||||||||||||  | |  | |||||||||||||||||||||| ||||||||||    
T  4105044 aaattgtaagtttcgtcaattatccttctgaaattaacaaaatttcaattaccccctgaaatt 4104982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 1144492 - 1144403
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattact-ccctgaaattg 396  Q
    ||||||| || ||| ||||| | | |||||||||||||||||||||  |  | ||||||||||||||| ||||||||| |||||||||||    
T  1144492 gagtaaatagtcaactacccccctgaaattgtaagtttcgtcaattacccccctaaaattaacaaaatgtcaattactcccctgaaattg 1144403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 389
Target Start/End: Complemental strand, 27342121 - 27342040
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccct 389  Q
    ||||||| |||||||||||||||| | |||||||||||| ||||||  | |  | |||||||||||| ||||||||| ||||    
T  27342121 gagtaaatagacaattaccctcttgatattgtaagtttcatcaattacctttttgaaattaacaaaacttcaattaccccct 27342040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 33159961 - 33159872
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcat-aaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||| ||||| | |||||||||||||||||||||  || | | |||||||| |||| ||||||||| |||||||||||    
T  33159961 gagtaaatagtcaatttccctcctgaaattgtaagtttcgtcaattaccaccctcaaaattaataaaacttcaattaccccctgaaattg 33159872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 396
Target Start/End: Complemental strand, 40988975 - 40988907
Alignment:
Q  327 ctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||| ||||||||||||||||||||| || |  |||||||||||||| ||||||||| || ||||||||    
T  40988975 ctcttgaaattgtaagtttcgtcaatt-accttttaaaattaacaaaacttcaattaccccatgaaattg 40988907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 396
Target Start/End: Original strand, 41084208 - 41084297
Alignment:
Q  307 cgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||| || ||||||||| | | |||||||||||||||||||||  |  | | ||||||||||||  |||||||| |||||||||||    
T  41084208 cgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacgtcaattaccccctgaaattg 41084297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 384
Target Start/End: Original strand, 9587508 - 9587584
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||| |||||||||||| | | |||||||||||||||||||||  |    |||||||||||||| |||||||||    
T  9587508 gagtaaatagacaattacccccctgaaattgtaagtttcgtcaattatccctttaaaattaacaaaacttcaattac 9587584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 2060582 - 2060669
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||| || ||||| ||||| | |||||||||||||| ||||||  |  | |||||||||||||| ||||||||| | ||||||||    
T  2060582 gagtaaatagtcaatttccctcctgaaattgtaagtttcatcaattatccccctaaaattaacaaaacttcaattaccctctgaaatt 2060669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 4001227 - 4001152
Alignment:
Q  307 cgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatt 382  Q
    |||||||| || ||||| ||| |||||||||||| ||||||||||||  | || | |||||||||||| |||||||    
T  4001227 cgagtaaatagtcaatttcccccttaaaattgtaggtttcgtcaattatcctcctgaaattaacaaaacttcaatt 4001152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 13544581 - 13544644
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||||||||||||  |  | | |||||||||||| ||||||||| |||||||||||    
T  13544581 aaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattaccccctgaaattg 13544644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 384
Target Start/End: Original strand, 4843659 - 4843737
Alignment:
Q  306 acgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||||| || ||||| ||||||| |||||||||||||| ||||||  |  | | |||||||||||| |||||||||    
T  4843659 acgagtaaatagtcaatttccctcttgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaattac 4843737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 10818421 - 10818355
Alignment:
Q  330 ttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||||||||||||||||||||  | |  |||||||||||||| ||| ||||| | |||||||||    
T  10818421 ttaaaattgtaagtttcgtcaattatccttttaaaattaacaaaacttcgattaccctctgaaattg 10818355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 6865479 - 6865434
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || |||||| || |||||||||||||||||||||||||    
T  6865479 gagtaaataggcaattatccccttaaaattgtaagtttcgtcaatt 6865434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 6914138 - 6914202
Alignment:
Q  319 caattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||||| | | ||||||||||||||||||| |||| || | |||||||||||| |||||||||    
T  6914138 caattacccgcctgaaattgtaagtttcgtcaa-ttacctcctgaaattaacaaaacttcaattac 6914202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 17648464 - 17648399
Alignment:
Q  319 caattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||||||| | |||| ||||||||||||||||  | || | |||||||||||| |||||||||    
T  17648464 caattaccctcctgaaatagtaagtttcgtcaattaccctcttgaaattaacaaaacttcaattac 17648399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 389
Target Start/End: Complemental strand, 32273236 - 32273155
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccct 389  Q
    ||||||| || ||||| | ||| | |||||||||||||| ||||||  | || | |||||||||||| ||||||||||||||    
T  32273236 gagtaaataggcaatttctctcctgaaattgtaagtttcatcaattaccctcttgaaattaacaaaacttcaattactccct 32273155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 746339 - 746426
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||| | | |||||||||||| |||||||||| |||| |  | |||||||||||| |||||||||  ||||||||||    
T  746339 gagtaaatagtcaatttctcccttaaaattgtaggtttcgtcaa-ttaccttctgaaattaacaaaacttcaattacctcctgaaattg 746426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 6915508 - 6915464
Alignment:
Q  309 agtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    |||||| |||||||||||| | | |||||||||||||||||||||    
T  6915508 agtaaatagacaattacccacctgaaattgtaagtttcgtcaatt 6915464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 41085419 - 41085364
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccct 389  Q
    |||||||||||||||||||||  | || ||||||||||||||| |||||||| ||||    
T  41085419 aaattgtaagtttcgtcaattatcctc-taaaattaacaaaatgtcaattaccccct 41085364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 396
Target Start/End: Original strand, 29487294 - 29487372
Alignment:
Q  316 agacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||||| | ||||||||||||||||||| |||| || |||| ||||||||| ||||||||| |||||||||||    
T  29487294 agacaattaccctcctgaaattgtaagtttcgtcaa-ttacctcctaaatttaacaaaacttcaattac-ccctgaaattg 29487372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 384
Target Start/End: Original strand, 45141465 - 45141543
Alignment:
Q  306 acgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||||| || ||||||||| | | |||||||||||||||||||||  |  |||||||||||||||| |||||||||    
T  45141465 acgagtaaataggcaattacccccgtgaaattgtaagtttcgtcaattatccccataaaattaacaaaacttcaattac 45141543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 16798349 - 16798260
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactcc-ctgaaattg 396  Q
    ||||||| || ||||| ||||| | |||||||||||||||||||||  | || |||||||||||||| ||||||||| || |||||||||    
T  16798349 gagtaaataggcaattgccctcctgaaattgtaagtttcgtcaattatcttcctaaaattaacaaaacttcaattacccctctgaaattg 16798260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 6783128 - 6783215
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||||||| | | |||||||| |||||||||||| ||  | ||||||||||||||| |||||||| |||||||||||    
T  6783128 gagtaaatagtcaattacccccctgaaattgtatgtttcgtcaatt-accccctaaaattaacaaaatgtcaattaccccctgaaattg 6783215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 395
Target Start/End: Complemental strand, 13158928 - 13158840
Alignment:
Q  307 cgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||||| |||||||||||| ||| |||||||||||||| ||||||  |  | | |||||||||||| ||||||||| || |||||||    
T  13158928 cgagtaaatagacaattacccccttgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaattaccccttgaaatt 13158840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 396
Target Start/End: Original strand, 11201899 - 11201986
Alignment:
Q  309 agtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||| || ||||||||| | | |||||||||||||||||||||  |  | | |||||||||||| ||||||||| |||||||||||    
T  11201899 agtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaattaccccctgaaattg 11201986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 391
Target Start/End: Complemental strand, 31676519 - 31676436
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctga 391  Q
    ||||||| || ||||||||| ||| |||||||||||||||||||||  |  | | |||||||||||| ||||||||| ||||||    
T  31676519 gagtaaataggcaattacccccttgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaattaccccctga 31676436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 389
Target Start/End: Complemental strand, 31058749 - 31058691
Alignment:
Q  331 taaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccct 389  Q
    |||||||||||||||||||||||  | |  |||||||||||||| ||||||||||||||    
T  31058749 taaaattgtaagtttcgtcaattatccttctaaaattaacaaaacttcaattactccct 31058691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 396
Target Start/End: Original strand, 7287552 - 7287629
Alignment:
Q  319 caattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||||||  | ||||||||||||| |||||||  |  | ||||||||||||||| |||||||| |||||||||||    
T  7287552 caattacccttctgaaattgtaagttttgtcaattacccccctaaaattaacaaaatgtcaattaccccctgaaattg 7287629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 8896920 - 8896965
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || ||||||||||| |||||||||||||||||||||||    
T  8896920 gagtaaatagtcaattaccctcctaaaattgtaagtttcgtcaatt 8896965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 32815180 - 32815091
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| ||||||||||| || | |||||||||||||||||||||  |  | | |||||||||||| |||||||| | |||||||||||    
T  32815180 gagtaaatagacaattaccatcctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaattacccccctgaaattg 32815091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 44210176 - 44210088
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattact-ccctgaaattg 396  Q
    ||||||| || ||||||||||| | ||||||||||||| ||||| ||||  | | |||||||||||| |||||||||| |||||||||||    
T  44210176 gagtaaataggcaattaccctcatgaaattgtaagttttgtcaa-ttaccccctgaaattaacaaaacttcaattactcccctgaaattg 44210088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 46294437 - 46294526
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || ||||||||| | | |||||||||||||||||||||  |  | ||||||||||||||| ||||||| | |||||||||||    
T  46294437 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccctaaaattaacaaaatgtcaattacccccctgaaattg 46294526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 389
Target Start/End: Original strand, 52869658 - 52869739
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccct 389  Q
    ||||||| || ||||||||| | | |||||||||||||||||||||  |  | ||||||||||||||| |||||||| ||||    
T  52869658 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccttaaaattaacaaaatgtcaattaccccct 52869739  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 16834365 - 16834452
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||||||| | | ||||||||||||||||||| ||||  | | |||||||||||| ||||||||| || ||||||||    
T  16834365 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa-ttaccccctgaaattaacaaaacttcaattaccccatgaaattg 16834452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 384
Target Start/End: Complemental strand, 24253214 - 24253138
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||| || ||||||||| | | |||||||||||||||||||||  |  | ||||||||||||||| ||||||||    
T  24253214 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccttaaaattaacaaaatgtcaattac 24253138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 396
Target Start/End: Complemental strand, 28297383 - 28297319
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    |||||||||||||||||||||  |  | ||||||||||||||| ||||||| |||||||||||||    
T  28297383 aaattgtaagtttcgtcaattacccccttaaaattaacaaaatgtcaattacctccctgaaattg 28297319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 396
Target Start/End: Complemental strand, 32186403 - 32186325
Alignment:
Q  316 agacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||| || ||| |||||||||||| ||||| ||  |||||||||||||||| ||||||||| | |||||||||    
T  32186403 agacaattaccccctgaaa-ttgtaagtttcgccaatt-accccataaaattaacaaaacttcaattaccctctgaaattg 32186325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 400
Target Start/End: Complemental strand, 1024282 - 1024215
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattgaaca 400  Q
    |||||||||||||| ||| ||  | |||| |||||||||||||||||||||| |||| ||||| ||||    
T  1024282 aaattgtaagtttcatcatttatcctcatgaaattaacaaaatttcaattaccccctaaaatttaaca 1024215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 51619409 - 51619496
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||| || ||||| ||| | | |||||||||||||| ||||||  |  | | |||||||||||||||||||||| ||||||||||    
T  51619409 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaatttcaattaccccctgaaatt 51619496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 25227430 - 25227492
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||||||||||| ||||||  | || | |||||||||||| ||||||||| ||||||||||    
T  25227430 aaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattaccccctgaaatt 25227492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 396
Target Start/End: Original strand, 36723295 - 36723372
Alignment:
Q  319 caattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccc-tgaaattg 396  Q
    ||||| ||||| | ||||||||||||||||||| ||||  | | |||||||||||||||||||||| ||| ||||||||    
T  36723295 caatttccctcctgaaattgtaagtttcgtcaa-ttaccccttgaaattaacaaaatttcaattacccccatgaaattg 36723372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 396
Target Start/End: Original strand, 44209100 - 44209190
Alignment:
Q  307 cgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaac-aaaatttcaattactccctgaaattg 396  Q
    |||||||| || ||||||||| | | |||||||||||||||||||||  | || | |||||||| |||| ||||||||| |||| ||||||    
T  44209100 cgagtaaataggcaattacccccctgaaattgtaagtttcgtcaattaccctcctgaaattaacaaaaacttcaattaccccctaaaattg 44209190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 1799861 - 1799816
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || ||||||||| ||| |||||||||||||||||||||    
T  1799861 gagtaaatagtcaattacccccttgaaattgtaagtttcgtcaatt 1799816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 395
Target Start/End: Complemental strand, 4470323 - 4470246
Alignment:
Q  319 caattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaatt 395  Q
    ||||| ||| ||| |||||||||||||| ||||||  |  | | ||||||||||||||||||||| ||||||||||||    
T  4470323 caatttcccccttgaaattgtaagtttcatcaattacccccttgaaattaacaaaatttcaattacctccctgaaatt 4470246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 18806631 - 18806720
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || |||||| |||| | |||||||||||||||||||||  |  | | |||||||||||| |||||||| | |||||||||||    
T  18806631 gagtaaataggcaattatcctcctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattatccccctgaaattg 18806720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 21247635 - 21247547
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || ||||||||| |||||| ||||||||||||||||||| |  | | ||| |||||||| |||||||| | |||||||||||    
T  21247635 gagtaaatagtcaattacccccttaaa-ttgtaagtttcgtcaatttcccccttgaaaataacaaaacttcaattacccccctgaaattg 21247547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 36305164 - 36305119
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| || ||||||||||||| ||||||||||||| |||||||    
T  36305164 gagtaaataggcaattaccctcttgaaattgtaagttttgtcaatt 36305119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 10386892 - 10386924
Alignment:
Q  363 aaattaacaaaatttcaattactccctgaaatt 395  Q
    |||||||||||||||||||||| ||||||||||    
T  10386892 aaattaacaaaatttcaattaccccctgaaatt 10386924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 388
Target Start/End: Complemental strand, 13243091 - 13243011
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccc 388  Q
    ||||||| || ||||| ||| | | |||||||||||||| ||||||  | || | |||||||||||| |||||||||||||    
T  13243091 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattactccc 13243011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 389
Target Start/End: Original strand, 17272907 - 17272987
Alignment:
Q  309 agtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccct 389  Q
    |||||| || ||||| ||| | |||||||||||||||| ||||||  |  ||| |||||||||||| ||||||||| ||||    
T  17272907 agtaaatagtcaatttcccccctaaaattgtaagtttcatcaattacccccatgaaattaacaaaagttcaattaccccct 17272987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 45216775 - 45216839
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    |||||||||||||||||||||  | || | |||||||||||| |||||||| | |||||||||||    
T  45216775 aaattgtaagtttcgtcaattaccctcctgaaattaacaaaacttcaattacccccctgaaattg 45216839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 48720792 - 48720856
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactc-cctgaaattg 396  Q
    |||||||||||||||||||||  | |  ||||||||||||||| |||||||| | ||||||||||    
T  48720792 aaattgtaagtttcgtcaattatccttctaaaattaacaaaatgtcaattaccctcctgaaattg 48720856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 48721612 - 48721525
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||||||| || ||| ||||||||||||||||||  |  | | ||||||||||||  |||||||| |||||||||||    
T  48721612 gagtaaatagtcaattaccccctgaaa-ttgtaagtttcgtcaattacccccttgaaattaacaaaacgtcaattaccccctgaaattg 48721525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 383
Target Start/End: Complemental strand, 52870735 - 52870683
Alignment:
Q  331 taaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta 383  Q
    |||||||||||||||||||||||  | || ||||||||| ||||| |||||||    
T  52870735 taaaattgtaagtttcgtcaattaccctcctaaaattaataaaatgtcaatta 52870683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 14053188 - 14053275
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||| || ||||| ||||| | |||||||||||||| ||||||  | || | |||||||||||||||||||||| ||||||||||    
T  14053188 gagtaaatagtcaatttccctcctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaatttcaattaccccctgaaatt 14053275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 44444809 - 44444896
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| || ||||||||| || ||| ||||||||||||||||||  |  ||||||||||||||||| |||||||| ||| |||||||    
T  44444809 gagtaaatagtcaattaccccctgaaa-ttgtaagtttcgtcaattacctccataaaattaacaaaatgtcaattacccccagaaattg 44444896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 12703936 - 12704014
Alignment:
Q  307 cgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacat-cataaaattaacaaaatttcaattact 385  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||| |||| | | | |||||||||||| ||||||||||    
T  12703936 cgagtaaatagacaattatcctcttaaaattgtaagtttcatcaa-ttacttccctgaaattaacaaaacttcaattact 12704014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 24573272 - 24573359
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||| || ||||| ||||| | |||||||||||||| ||||||  |  | |||||||||||||| ||||||||| ||||||||||    
T  24573272 gagtaaatagtcaatttccctcctgaaattgtaagtttcatcaattatccccttaaaattaacaaaacttcaattaccccctgaaatt 24573359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 383
Target Start/End: Complemental strand, 43285057 - 43284982
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta 383  Q
    ||||||| || ||||| ||||| | |||||||||||||| ||||||  | |||| |||||||||||||||||||||    
T  43285057 gagtaaatagtcaatttccctcctgaaattgtaagtttcatcaattaccctcatgaaattaacaaaatttcaatta 43284982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 401
Target Start/End: Original strand, 38713363 - 38713457
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattgaacat 401  Q
    ||||||| || ||||||||| | | |||||||||||||||||||||  | || | |||||||||||| |||||||| | ||||||||||| ||||    
T  38713363 gagtaaataggcaattacccccctcaaattgtaagtttcgtcaattaccctcctgaaattaacaaaacttcaattacccccctgaaattgcacat 38713457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 5794606 - 5794662
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccct 389  Q
    |||||||||||||| ||||||  | || | |||||||||||||||||||||||||||    
T  5794606 aaattgtaagtttcatcaattaccctcctgaaattaacaaaatttcaattactccct 5794662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 397
Target Start/End: Original strand, 10970421 - 10970485
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattga 397  Q
    |||||||||||||||||||||  | || | |||||||||||| ||||||||| | ||||||||||    
T  10970421 aaattgtaagtttcgtcaattatcctcttgaaattaacaaaacttcaattaccctctgaaattga 10970485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 11180082 - 11179996
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| |||| ||||||| ||| ||||||||||||||||||||| ||  | | |||||||||||| |||||||||  ||||||||||    
T  11180082 gagtaaatagacgattaccc-cttgaaattgtaagtttcgtcaatt-actccctgaaattaacaaaacttcaattacctcctgaaattg 11179996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 32448942 - 32449028
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    ||||||| ||||||||||||  | ||||||||||||||||||||||    || | |||||||||||| |||||||||| ||||||||||    
T  32448942 gagtaaatagacaattaccccttgaaaattgtaagtttcgtcaattattctc-tgaaattaacaaaacttcaattact-cctgaaattg 32449028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 396
Target Start/End: Complemental strand, 12503249 - 12503186
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||||| ||||||  |  | |||||||||||||| ||||||||| |||||||||||    
T  12503249 aaattgtaagtttcatcaattaccgccctaaaattaacaaaacttcaattaccccctgaaattg 12503186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 395
Target Start/End: Complemental strand, 17734018 - 17733931
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||| ||| ||||| |||| | ||||||||||||| |||||||  |  | | |||||||||||| ||||||||| ||||||||||    
T  17734018 gagtaaatagataattatcctcctgaaattgtaagttttgtcaattacctccttgaaattaacaaaacttcaattaccccctgaaatt 17733931  T

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Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 20165974 - 20166025
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||||||||||||||||| || || ||||| ||||||||| ||||||||    
T  20165974 aaattgtaagtttcgtcaattaacctcctaaaagtaacaaaatgtcaattac 20166025  T

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Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 20831815 - 20831877
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||||| |||||| || || | |||||||||||| ||||||||| |||||||||||    
T  20831815 aaattgtaagtttcatcaatt-acctcctgaaattaacaaaacttcaattaccccctgaaattg 20831877  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 39324460 - 39324547
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaatt 395  Q
    ||||||| || ||||| ||| | | |||||||||||||| ||||||  | || | |||||||||||| ||||||||| ||||||||||    
T  39324460 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattaccccctgaaatt 39324547  T

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Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 23563880 - 23563923
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    ||||||| ||||||||||||||  ||||||||||||||||||||||    
T  23563880 gagtaaacagacaattaccctc--aaaattgtaagtttcgtcaatt 23563923  T

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Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 3178644 - 3178556
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || ||||| ||||| | ||||||||||||||||||||| ||  |  ||||||||||||| |||||||| | |||||||||||    
T  3178644 gagtaaatagtcaatttccctcctgaaattgtaagtttcgtcaatt-accccccaaaattaacaaaacttcaattacccccctgaaattg 3178556  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 384
Target Start/End: Original strand, 9736109 - 9736186
Alignment:
Q  308 gagtaaaaagacaatta-ccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||| || |||||| |||| || |||||||||||||||||||||  | |  | ||||||||||||||||||||||    
T  9736109 gagtaaataggcaattatccctattgaaattgtaagtttcgtcaattatccttttgaaattaacaaaatttcaattac 9736186  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 15565713 - 15565624
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    ||||||| || ||||||||| ||| ||||||||||||| |||||||  |  | | |||||||||||| |||||||| | |||||||||||    
T  15565713 gagtaaatagtcaattacccccttgaaattgtaagttttgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattg 15565624  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 396
Target Start/End: Complemental strand, 17925336 - 17925259
Alignment:
Q  320 aattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaatta-ctccctgaaattg 396  Q
    |||||||| | | |||||||||||||||||||||  |  | ||||||||||||||| ||||||| | |||||||||||    
T  17925336 aattacccccctgaaattgtaagtttcgtcaattacccccctaaaattaacaaaatgtcaattacccccctgaaattg 17925259  T

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Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 384
Target Start/End: Original strand, 2656814 - 2656890
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||| || ||||| || |||| |||||||||||||| ||||||  | || | |||||||||||| |||||||||    
T  2656814 gagtaaatagtcaatttccttcttgaaattgtaagtttcatcaattatcttcctgaaattaacaaaacttcaattac 2656890  T

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Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 393
Target Start/End: Complemental strand, 95094 - 95010
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaa 393  Q
    ||||||| || ||||||||| | | ||||||||||||||||||| ||||  | ||||||||||||||| |||||||| ||||||||    
T  95094 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa-ttaccccctaaaattaacaaaatgtcaattaccccctgaaa 95010  T

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Target: scaffold0340 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 396
Target Start/End: Complemental strand, 2459 - 2397
Alignment:
Q  333 aaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||||||||||||  | |  |||||||||||||| ||||||||| |||||||||||    
T  2459 aaattgtaagtttcgtcaattaccctt-taaaattaacaaaacttcaattacaccctgaaattg 2397  T

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Target: scaffold0140 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 4383 - 4445
Alignment:
Q  322 ttaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    |||||| |||||||||||||||||||||||||  | || | ||||||| |||| |||||||||    
T  4383 ttacccccttaaaattgtaagtttcgtcaattatcctcttgaaattaataaaacttcaattac 4445  T

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Target: scaffold0219 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 396
Target Start/End: Original strand, 22181 - 22214
Alignment:
Q  363 aaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||||||||||||||||| |||||||||||    
T  22181 aaattaacaaaatttcaattaccccctgaaattg 22214  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 41337 - 41370
Alignment:
Q  320 aattaccctcttaaaattgtaagtttcgtcaatt 353  Q
    |||||||||||| |||||||||||||||||||||    
T  41337 aattaccctcttgaaattgtaagtttcgtcaatt 41370  T

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Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 384
Target Start/End: Complemental strand, 43501 - 43425
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||| || ||||||||| | | |||||||||||||||||||||  |  | | |||||||||||| |||||||||    
T  43501 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattac 43425  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 396
Target Start/End: Original strand, 130880 - 130968
Alignment:
Q  307 cgagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattactccctgaaattg 396  Q
    |||||||| || ||||| |||||| ||| ||||||||||||||||||  |  | | |||||||||||| ||||||||| || ||||||||    
T  130880 cgagtaaatagtcaatttccctctgaaa-ttgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattaccccatgaaattg 130968  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 384
Target Start/End: Original strand, 12291 - 12367
Alignment:
Q  308 gagtaaaaagacaattaccctcttaaaattgtaagtttcgtcaatttacatcataaaattaacaaaatttcaattac 384  Q
    ||||||| || ||||| ||||| | |||||||||||||| ||||||  |  | |||||||||||||| |||||||||    
T  12291 gagtaaatagtcaatttccctcctgaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaattac 12367  T

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