View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10222_low_2 (Length: 551)
Name: NF10222_low_2
Description: NF10222
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10222_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 514; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 18 - 543
Target Start/End: Original strand, 43487066 - 43487591
Alignment:
| Q |
18 |
aagaaacacaaatgaatactcgagaatgtgataacttacatgttgaaatccaaaacctccaagagtagggctatgaaagatatcaatattccttgatgga |
117 |
Q |
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| T |
43487066 |
aagaaacacaaatgaatactcgagaatgtgataacttacatgttgaaatccaaaacctccaagagtcgggctatgaaagatatcaatattccttgatgga |
43487165 |
T |
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| Q |
118 |
gtaaccctccactttctctcttgctctactgcctcaaacaattcttgactattgtaaaatgcaaaagtttaataacatgataaactaattaaagaactaa |
217 |
Q |
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| T |
43487166 |
gtaaccctccactttctctcttgctctactgcctcaaacaattcttgactattgtaaaatgcaaaagtttaataacatgataaactaattaaagaactaa |
43487265 |
T |
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| Q |
218 |
agcatagataatgtatataattcatgttaagagtaaaattcatgaccaacccagtaggatctttcaagctaataggttgccaacacataggacattggga |
317 |
Q |
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| T |
43487266 |
agcatagataatgtatataattcatgttaagagtaaaattcatgaccaacccagtaggatctttcaagctaataggttgccaacacataggacattggga |
43487365 |
T |
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| Q |
318 |
gcttctttgacccctacaaataagagcaaataccaattgcttaagcatatctgttcattttgaaatatttttatgaaaatttagactttaagatgtaatt |
417 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43487366 |
gcttctttgacccctacaaataagagcaaataccaattgcttaagcatatttgttcattttgaaatatttttatgaaaatttagactttaagatgtaatt |
43487465 |
T |
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| Q |
418 |
agatatatggaaatttagtggataataaaaagtaccattccaggacgcattgcaggtgaaactcgtgccggcaagcagtggcctacaacacaagagaaag |
517 |
Q |
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| T |
43487466 |
agatatatggaaatttagtggataataaaaagtaccattccaggacgcattgcaggtgaaactcgtgccggcaagcagtagcctacaacacaagagaaag |
43487565 |
T |
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| Q |
518 |
aaaataagtaaccaaatgttcttctc |
543 |
Q |
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| T |
43487566 |
aaaataagtaaccaaatgttcttctc |
43487591 |
T |
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