View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10222_low_5 (Length: 363)
Name: NF10222_low_5
Description: NF10222
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10222_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 333; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 1 - 345
Target Start/End: Complemental strand, 36475817 - 36475473
Alignment:
| Q |
1 |
aagcgtgtagagaaagctactaaaatcattttctttcacttcattcgaagaaaagataaagaatcatcttctccaccattttcttactcttcattcacaa |
100 |
Q |
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| T |
36475817 |
aagcgtgtagagaaagctactaaaatcattttctttcacttcattcaaagaaaagataaagaatcatcttctccaccattttcttactcttcattcacaa |
36475718 |
T |
|
| Q |
101 |
caaacatatggataatgaaactcatgaaaggattctctgtaatttggtactttctccaaacgaagaaacacgtgataagggtaaacatagctacgatttg |
200 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
36475717 |
caaacatatggataatgaaactcatgaaaggtttctctgtaatttggtactttctccaaacgaagaaacacgtgataagggtaaacatagctgcgatttg |
36475618 |
T |
|
| Q |
201 |
ctcaaatccgttgatctacaaggtgttttctacgatgaattggttaaactcctaagttctctagataaagcaaccagaaggttagccgtcattgttcttt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36475617 |
ctcaaatccgttgatctacaaggtgttttctacgatgaattggttaaactcctaagttctctagataaagcaaccagaaggttagccgtcattgttcttt |
36475518 |
T |
|
| Q |
301 |
gtgatgctctctcgacgcaataactcctcaaaatcattcacgagt |
345 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36475517 |
gtgatgctctctcgacgcaataactcctcaaaatcattcacgagt |
36475473 |
T |
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