View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10225_high_28 (Length: 242)
Name: NF10225_high_28
Description: NF10225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10225_high_28 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 33292045 - 33292269
Alignment:
| Q |
1 |
taatctatctgcaatttgtatccccatattaatatttttatggattctacaaccgccgagcaaagcctcgagcacgtcaatgcttggttcaatgggaatt |
100 |
Q |
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| T |
33292045 |
taatctatctgcaatttgtatccccatattaatatttttatggattctgcaaccgccgagcaaagcctcgagcacatcaatgcttggttcaacgggaatt |
33292144 |
T |
|
| Q |
101 |
tgtttaaccaatgcatatgcttcctcaagatagcctgctcgactaagaagatccacaaaacaagcatagtgtttgtcactaggcttaatattatgaactc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33292145 |
tgtttaaccaatgcatatgcttcctcaagatagcctgctcgactaagaagatccacaaaacaagcatagtgtttgtcactaggcttaatattatgaactc |
33292244 |
T |
|
| Q |
201 |
tttccatacagtggaacaaagtcct |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
33292245 |
tttccatacagtggaacaaagtcct |
33292269 |
T |
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