View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10226_low_35 (Length: 208)
Name: NF10226_low_35
Description: NF10226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10226_low_35 |
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Alignment Details
Target: chr5 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 17429223 - 17429049
Alignment:
| Q |
18 |
gagacgattgagtggctgcttcaacaggcagagccagccgtcatcgccgccaccggaacaggaacaattccggccaactttacttcacttaatatttctc |
117 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
17429223 |
gagacgattgagtggctgcttcaacaggcagagccagccgtcatcgccgccaccggaacaggaacaattccggccaactttacttcacttaatatatctc |
17429124 |
T |
|
| Q |
118 |
ttagaagctcaggctcaaccatgtctgcaccgtctcactattttcgaggtaactactttaaccctagctcgttct |
192 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17429123 |
ttagaagctcaggctcaaccatgtctgcgccgtctcactattttcgaggtaactactttaaccctagctcgttct |
17429049 |
T |
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