View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10227_high_10 (Length: 258)
Name: NF10227_high_10
Description: NF10227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10227_high_10 |
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Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 9325601 - 9325840
Alignment:
| Q |
1 |
gtcaaattaaaagggacatggatttatttatatatttagtgtcttctataacaaaagggacaaattaaaaggttaaaaaactcttttcttcacatttaaa |
100 |
Q |
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| T |
9325601 |
gtcaaattaaaagggacatggatttatttatatatttagtgtcttctataacaaaagggacaaattaaaaggttaaaaaattcttttcttcacatttaaa |
9325700 |
T |
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| Q |
101 |
aatcttagttgcatgatgtggcttgtttctagttggtgttgtgaaatattagtagttgaaaaaggtttaatatataatatacagaccaaattctcattat |
200 |
Q |
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||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |
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| T |
9325701 |
aatcttaattgcataatgtggcttgtttctagttggtgttgtgaaatattagtagttgaaaaaggttgaatatataatatacagaacaaattctcattat |
9325800 |
T |
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| Q |
201 |
tatccctaaccacattttctaaggtaaaatatgattaaac |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
9325801 |
tatccctaaccacattttctaaggtaaaatatgattaaac |
9325840 |
T |
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