View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10227_high_2 (Length: 495)

Name: NF10227_high_2
Description: NF10227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10227_high_2
NF10227_high_2
[»] chr8 (67 HSPs)
chr8 (93-328)||(7612499-7612737)
chr8 (93-324)||(27109732-27109968)
chr8 (82-246)||(2067782-2067951)
chr8 (93-328)||(9022396-9022636)
chr8 (147-328)||(30788936-30789116)
chr8 (147-324)||(22601141-22601316)
chr8 (174-324)||(14541744-14541893)
chr8 (93-324)||(32326637-32326873)
chr8 (380-468)||(11312266-11312354)
chr8 (199-328)||(3095527-3095655)
chr8 (93-324)||(36915372-36915605)
chr8 (174-328)||(11257543-11257694)
chr8 (174-331)||(27416499-27416657)
chr8 (93-246)||(7129359-7129522)
chr8 (174-329)||(18673097-18673252)
chr8 (93-233)||(45187206-45187353)
chr8 (201-324)||(32661310-32661432)
chr8 (203-328)||(8382505-8382629)
chr8 (205-324)||(34461611-34461732)
chr8 (93-233)||(38328967-38329111)
chr8 (92-246)||(11335950-11336103)
chr8 (174-329)||(13108988-13109143)
chr8 (174-324)||(34168210-34168353)
chr8 (214-328)||(35052472-35052587)
chr8 (148-328)||(5588440-5588625)
chr8 (203-324)||(39970330-39970450)
chr8 (90-197)||(24732079-24732191)
chr8 (148-246)||(6839289-6839387)
chr8 (173-246)||(18666542-18666615)
chr8 (173-246)||(16209023-16209096)
chr8 (89-157)||(4760467-4760535)
chr8 (159-246)||(29931224-29931311)
chr8 (264-331)||(33870752-33870819)
chr8 (147-246)||(41790112-41790211)
chr8 (174-251)||(8471335-8471413)
chr8 (266-328)||(38329119-38329181)
chr8 (210-328)||(42946123-42946240)
chr8 (190-233)||(1774085-1774128)
chr8 (173-327)||(5044224-5044378)
chr8 (100-150)||(1774009-1774059)
chr8 (267-328)||(1774150-1774211)
chr8 (91-331)||(41414840-41415074)
chr8 (214-328)||(32271510-32271624)
chr8 (203-325)||(43938124-43938246)
chr8 (269-331)||(7129299-7129361)
chr8 (93-150)||(4530050-4530107)
chr8 (92-157)||(8471435-8471500)
chr8 (267-328)||(29931322-29931383)
chr8 (204-260)||(37185679-37185734)
chr8 (92-151)||(396136-396195)
chr8 (269-324)||(8471286-8471341)
chr8 (92-151)||(11168866-11168925)
chr8 (269-324)||(18666613-18666668)
chr8 (178-233)||(42709991-42710046)
chr8 (92-126)||(14541912-14541946)
chr8 (267-324)||(156246-156303)
chr8 (269-322)||(2812817-2812870)
chr8 (93-126)||(8382399-8382432)
chr8 (100-157)||(9880420-9880477)
chr8 (148-264)||(32737831-32737945)
chr8 (93-126)||(37559699-37559732)
chr8 (90-126)||(18673264-18673300)
chr8 (268-331)||(26438973-26439036)
chr8 (268-328)||(32061515-32061575)
chr8 (93-157)||(34461494-34461558)
chr8 (90-126)||(35052422-35052458)
chr8 (93-157)||(39463434-39463498)
[»] chr4 (79 HSPs)
chr4 (93-323)||(44855245-44855481)
chr4 (102-328)||(52732597-52732819)
chr4 (146-328)||(37445658-37445839)
chr4 (100-230)||(56422921-56423056)
chr4 (100-246)||(21045212-21045361)
chr4 (203-331)||(31987299-31987426)
chr4 (174-328)||(19849082-19849235)
chr4 (146-324)||(30022070-30022246)
chr4 (188-328)||(31941556-31941697)
chr4 (90-246)||(43421036-43421197)
chr4 (90-324)||(24259613-24259853)
chr4 (93-246)||(31817114-31817273)
chr4 (93-328)||(22212339-22212578)
chr4 (174-328)||(47321142-47321298)
chr4 (95-324)||(34096017-34096251)
chr4 (152-331)||(45520437-45520614)
chr4 (93-331)||(54512027-54512260)
chr4 (174-331)||(28116240-28116398)
chr4 (148-246)||(51930655-51930753)
chr4 (146-246)||(34360084-34360184)
chr4 (91-328)||(36805364-36805597)
chr4 (174-328)||(34124293-34124448)
chr4 (92-251)||(50072332-50072492)
chr4 (90-324)||(17499627-17499867)
chr4 (203-331)||(29289921-29290047)
chr4 (174-305)||(45889584-45889716)
chr4 (188-328)||(51434270-51434411)
chr4 (148-324)||(15501129-15501295)
chr4 (148-312)||(42672404-42672566)
chr4 (203-328)||(54091956-54092080)
chr4 (84-324)||(19282314-19282560)
chr4 (86-331)||(3093348-3093591)
chr4 (203-322)||(30492732-30492851)
chr4 (174-328)||(55126495-55126650)
chr4 (91-246)||(56556192-56556349)
chr4 (173-312)||(35928505-35928641)
chr4 (190-324)||(6510120-6510253)
chr4 (202-331)||(11835102-11835228)
chr4 (148-246)||(32140961-32141059)
chr4 (174-324)||(4408176-4408328)
chr4 (188-324)||(6462011-6462153)
chr4 (147-320)||(17317821-17317989)
chr4 (235-324)||(29840077-29840166)
chr4 (148-246)||(39671081-39671179)
chr4 (203-246)||(38692469-38692512)
chr4 (189-243)||(54233900-54233954)
chr4 (148-331)||(45903391-45903562)
chr4 (203-331)||(45049704-45049831)
chr4 (269-324)||(32141057-32141112)
chr4 (269-324)||(50072283-50072338)
chr4 (88-126)||(2728309-2728347)
chr4 (87-157)||(38991673-38991743)
chr4 (266-324)||(43421207-43421265)
chr4 (90-151)||(7905920-7905981)
chr4 (89-126)||(38510168-38510205)
chr4 (92-157)||(53814412-53814477)
chr4 (90-126)||(54042095-54042131)
chr4 (89-157)||(55126672-55126740)
chr4 (269-324)||(56556347-56556403)
chr4 (90-157)||(29519438-29519505)
chr4 (92-151)||(37624728-37624787)
chr4 (269-324)||(51930602-51930657)
chr4 (91-125)||(19282581-19282615)
chr4 (100-150)||(34124477-34124527)
chr4 (92-146)||(47321331-47321385)
chr4 (92-157)||(6462189-6462254)
chr4 (89-126)||(28116192-28116229)
chr4 (92-157)||(40345262-40345327)
chr4 (92-125)||(45043759-45043792)
chr4 (93-126)||(50203032-50203065)
chr4 (100-157)||(52957713-52957770)
chr4 (93-157)||(2493279-2493343)
chr4 (269-324)||(21045158-21045214)
chr4 (91-151)||(22220284-22220344)
chr4 (91-119)||(30022018-30022046)
chr4 (93-157)||(37654587-37654651)
chr4 (93-125)||(42672023-42672055)
chr4 (93-157)||(45889738-45889802)
chr4 (90-126)||(52915712-52915748)
[»] scaffold0119 (2 HSPs)
scaffold0119 (100-324)||(1548-1776)
scaffold0119 (93-125)||(1499-1531)
[»] chr7 (68 HSPs)
chr7 (104-328)||(41905858-41906085)
chr7 (92-321)||(34002043-34002277)
chr7 (91-328)||(42259459-42259699)
chr7 (148-328)||(3680895-3681074)
chr7 (87-328)||(36447517-36447753)
chr7 (147-328)||(28044112-28044283)
chr7 (174-324)||(1103490-1103639)
chr7 (146-324)||(17869243-17869420)
chr7 (148-246)||(18886728-18886826)
chr7 (174-310)||(26963499-26963636)
chr7 (85-324)||(32345738-32345983)
chr7 (93-324)||(5723009-5723227)
chr7 (189-328)||(31416763-31416903)
chr7 (146-331)||(19920253-19920426)
chr7 (93-324)||(40298853-40299079)
chr7 (174-324)||(10684827-10684978)
chr7 (174-324)||(19906420-19906569)
chr7 (88-331)||(26527307-26527551)
chr7 (188-324)||(30514979-30515116)
chr7 (146-285)||(34733356-34733492)
chr7 (148-331)||(30833067-30833248)
chr7 (214-331)||(42044016-42044134)
chr7 (190-324)||(36447083-36447218)
chr7 (174-324)||(39117486-39117636)
chr7 (108-324)||(42121556-42121768)
chr7 (205-324)||(36836065-36836184)
chr7 (146-324)||(32275210-32275378)
chr7 (98-246)||(33056201-33056355)
chr7 (93-310)||(33845337-33845544)
chr7 (266-328)||(43813434-43813496)
chr7 (93-328)||(6521820-6522060)
chr7 (146-324)||(22627324-22627494)
chr7 (203-324)||(18733459-18733581)
chr7 (244-331)||(19288415-19288502)
chr7 (174-268)||(47272213-47272306)
chr7 (93-233)||(40207299-40207447)
chr7 (174-246)||(42010573-42010645)
chr7 (89-146)||(45933495-45933552)
chr7 (147-246)||(48838651-48838755)
chr7 (269-328)||(18886671-18886730)
chr7 (282-328)||(32873269-32873315)
chr7 (93-126)||(18733408-18733441)
chr7 (93-157)||(7795153-7795217)
chr7 (268-324)||(22597236-22597292)
chr7 (93-157)||(48684900-48684964)
chr7 (92-126)||(30833258-30833292)
chr7 (93-151)||(40339641-40339699)
chr7 (88-126)||(44453341-44453379)
chr7 (257-330)||(47271725-47271799)
chr7 (92-157)||(1742168-1742233)
chr7 (100-157)||(16564720-16564777)
chr7 (100-157)||(16600885-16600942)
chr7 (188-233)||(19277057-19277102)
chr7 (93-126)||(22297952-22297985)
chr7 (93-126)||(23155372-23155405)
chr7 (94-127)||(23935376-23935409)
chr7 (92-125)||(23935630-23935663)
chr7 (93-126)||(27935975-27936008)
chr7 (92-157)||(29530844-29530909)
chr7 (93-126)||(31930024-31930057)
chr7 (282-331)||(40805023-40805072)
chr7 (93-157)||(13405037-13405101)
chr7 (91-151)||(18270750-18270810)
chr7 (90-126)||(19906622-19906658)
chr7 (90-126)||(36446978-36447014)
chr7 (268-324)||(40207469-40207525)
chr7 (90-126)||(44567205-44567241)
chr7 (90-126)||(45948537-45948573)
[»] chr6 (34 HSPs)
chr6 (100-324)||(26669017-26669245)
chr6 (101-324)||(32258727-32258945)
chr6 (146-324)||(12828651-12828828)
chr6 (92-324)||(29915546-29915784)
chr6 (91-324)||(29927212-29927450)
chr6 (92-324)||(23936494-23936729)
chr6 (144-324)||(31275609-31275789)
chr6 (100-246)||(1924594-1924744)
chr6 (174-328)||(17345132-17345287)
chr6 (190-328)||(34576545-34576684)
chr6 (92-324)||(34439319-34439560)
chr6 (174-324)||(4123854-4124002)
chr6 (90-324)||(30627096-30627325)
chr6 (204-328)||(8052346-8052468)
chr6 (214-328)||(6140601-6140715)
chr6 (214-328)||(6143085-6143200)
chr6 (175-328)||(10494760-10494913)
chr6 (188-324)||(26189513-26189651)
chr6 (173-317)||(11785099-11785242)
chr6 (241-328)||(4132039-4132126)
chr6 (210-328)||(19689870-19689985)
chr6 (174-328)||(25932629-25932785)
chr6 (90-157)||(24163622-24163690)
chr6 (93-125)||(26669262-26669294)
chr6 (91-126)||(29713316-29713351)
chr6 (88-125)||(24555833-24555871)
chr6 (91-157)||(25932807-25932873)
chr6 (92-126)||(32429239-32429273)
chr6 (174-223)||(6992508-6992557)
chr6 (92-125)||(9940601-9940634)
chr6 (93-126)||(34519291-34519324)
chr6 (105-157)||(6992579-6992631)
chr6 (93-125)||(26189462-26189494)
chr6 (98-126)||(28554770-28554798)
[»] chr3 (80 HSPs)
chr3 (88-324)||(26965415-26965646)
chr3 (148-324)||(37225567-37225742)
chr3 (91-324)||(54933113-54933352)
chr3 (96-328)||(2567927-2568154)
chr3 (146-310)||(647562-647725)
chr3 (93-246)||(790155-790313)
chr3 (116-328)||(19552542-19552750)
chr3 (104-324)||(27483116-27483331)
chr3 (148-324)||(46362982-46363158)
chr3 (114-328)||(34059878-34060085)
chr3 (101-324)||(43580481-43580712)
chr3 (93-246)||(53716088-53716245)
chr3 (174-324)||(2988606-2988756)
chr3 (174-324)||(43169340-43169491)
chr3 (146-324)||(83302-83478)
chr3 (174-331)||(25722457-25722615)
chr3 (92-324)||(44854321-44854555)
chr3 (148-324)||(38457466-38457641)
chr3 (188-331)||(44645337-44645481)
chr3 (202-328)||(15514751-15514877)
chr3 (93-324)||(20512406-20512644)
chr3 (174-324)||(43687879-43688033)
chr3 (148-331)||(1340901-1341074)
chr3 (174-328)||(32303901-32304056)
chr3 (203-328)||(3000754-3000879)
chr3 (93-328)||(25061706-25061934)
chr3 (203-310)||(35099393-35099499)
chr3 (174-324)||(54261421-54261572)
chr3 (173-324)||(27027739-27027893)
chr3 (152-331)||(41287075-41287255)
chr3 (203-328)||(4391906-4392030)
chr3 (93-328)||(44648322-44648552)
chr3 (147-247)||(2662463-2662563)
chr3 (87-241)||(40048962-40049121)
chr3 (92-328)||(5244588-5244826)
chr3 (148-328)||(22730927-22731112)
chr3 (93-324)||(51381727-51381967)
chr3 (174-246)||(35239444-35239516)
chr3 (148-227)||(38165633-38165712)
chr3 (174-310)||(53560685-53560821)
chr3 (217-324)||(36310290-36310397)
chr3 (156-310)||(27039347-27039501)
chr3 (174-324)||(36541497-36541648)
chr3 (146-331)||(43600160-43600344)
chr3 (269-328)||(53716031-53716090)
chr3 (93-326)||(31290886-31291113)
chr3 (174-328)||(36771574-36771718)
chr3 (208-324)||(50420265-50420379)
chr3 (202-331)||(22414754-22414881)
chr3 (93-229)||(43736783-43736922)
chr3 (90-157)||(51398187-51398254)
chr3 (243-328)||(42857125-42857210)
chr3 (188-331)||(42007072-42007215)
chr3 (92-246)||(16240659-16240809)
chr3 (205-324)||(49470795-49470915)
chr3 (86-157)||(47895246-47895317)
chr3 (91-157)||(33193938-33194004)
chr3 (266-331)||(45095552-45095615)
chr3 (88-126)||(51397959-51397997)
chr3 (248-305)||(52222816-52222873)
chr3 (93-125)||(42939923-42939955)
chr3 (269-324)||(790102-790157)
chr3 (93-132)||(30706661-30706700)
chr3 (269-324)||(35239392-35239446)
chr3 (91-126)||(36461013-36461048)
chr3 (264-331)||(42740231-42740298)
chr3 (100-186)||(42857010-42857101)
chr3 (91-157)||(45213629-45213695)
chr3 (92-150)||(54261601-54261659)
chr3 (93-126)||(4758945-4758978)
chr3 (93-126)||(30186328-30186361)
chr3 (253-318)||(38100058-38100123)
chr3 (93-126)||(40048849-40048882)
chr3 (93-126)||(43169289-43169322)
chr3 (266-310)||(9167766-9167810)
chr3 (93-157)||(41850558-41850622)
chr3 (214-246)||(42791386-42791418)
chr3 (83-151)||(44064365-44064433)
chr3 (90-126)||(44645291-44645327)
chr3 (86-126)||(51057662-51057702)
[»] chr2 (59 HSPs)
chr2 (108-324)||(4840654-4840874)
chr2 (108-310)||(43460792-43460995)
chr2 (100-331)||(1298699-1298934)
chr2 (93-246)||(4766129-4766282)
chr2 (91-328)||(7743402-7743643)
chr2 (100-246)||(40410525-40410676)
chr2 (93-328)||(24775190-24775429)
chr2 (174-330)||(16316708-16316863)
chr2 (147-324)||(43344194-43344368)
chr2 (92-325)||(40987193-40987419)
chr2 (174-311)||(41984436-41984575)
chr2 (100-246)||(14378167-14378318)
chr2 (188-328)||(2459774-2459915)
chr2 (148-305)||(37106886-37107044)
chr2 (93-324)||(43388569-43388804)
chr2 (104-324)||(36360298-36360520)
chr2 (174-331)||(39866669-39866827)
chr2 (189-324)||(10580869-10581005)
chr2 (98-246)||(34225832-34225985)
chr2 (148-324)||(29795171-29795337)
chr2 (151-328)||(1381751-1381916)
chr2 (203-324)||(1360182-1360302)
chr2 (188-324)||(33093373-33093510)
chr2 (203-324)||(4536579-4536696)
chr2 (174-305)||(25332595-25332726)
chr2 (174-324)||(775882-776032)
chr2 (174-331)||(4566119-4566277)
chr2 (204-324)||(18374792-18374911)
chr2 (203-328)||(6591966-6592090)
chr2 (152-278)||(11171792-11171919)
chr2 (269-330)||(14378316-14378377)
chr2 (91-126)||(25383395-25383430)
chr2 (174-251)||(14698066-14698144)
chr2 (93-126)||(5717468-5717501)
chr2 (93-126)||(16792439-16792472)
chr2 (89-126)||(32228176-32228213)
chr2 (93-157)||(681679-681743)
chr2 (93-157)||(29808990-29809054)
chr2 (93-157)||(45081818-45081882)
chr2 (269-324)||(4766280-4766335)
chr2 (93-123)||(983735-983765)
chr2 (84-150)||(14698173-14698239)
chr2 (92-126)||(37724200-37724234)
chr2 (89-126)||(4840891-4840928)
chr2 (92-125)||(7028977-7029010)
chr2 (203-324)||(14511465-14511585)
chr2 (93-126)||(16807429-16807462)
chr2 (93-126)||(16846710-16846743)
chr2 (93-150)||(25332755-25332812)
chr2 (90-151)||(35799398-35799459)
chr2 (93-126)||(40987421-40987454)
chr2 (94-126)||(776049-776081)
chr2 (86-126)||(2459720-2459760)
chr2 (93-157)||(4133199-4133263)
chr2 (93-157)||(8774229-8774293)
chr2 (93-157)||(8789342-8789406)
chr2 (93-157)||(29396592-29396656)
chr2 (93-157)||(33093545-33093609)
chr2 (269-324)||(34225778-34225834)
[»] chr1 (81 HSPs)
chr1 (108-323)||(52403482-52403701)
chr1 (93-331)||(28751320-28751563)
chr1 (100-324)||(5317496-5317724)
chr1 (146-328)||(12002247-12002428)
chr1 (189-331)||(44582791-44582934)
chr1 (174-324)||(11650063-11650212)
chr1 (93-247)||(84430-84589)
chr1 (95-328)||(1428867-1429105)
chr1 (174-328)||(42650247-42650401)
chr1 (96-330)||(17919736-17919973)
chr1 (174-324)||(26252123-26252274)
chr1 (191-328)||(15698766-15698902)
chr1 (89-246)||(24040932-24041094)
chr1 (174-326)||(2245789-2245942)
chr1 (93-304)||(28200134-28200351)
chr1 (174-324)||(254909-255061)
chr1 (92-246)||(1430447-1430607)
chr1 (98-329)||(40719015-40719250)
chr1 (87-331)||(50158224-50158461)
chr1 (193-328)||(17806392-17806526)
chr1 (92-328)||(44583773-44584009)
chr1 (108-328)||(6332167-6332392)
chr1 (203-329)||(45377177-45377302)
chr1 (88-324)||(48259770-48260001)
chr1 (148-304)||(43929710-43929864)
chr1 (174-324)||(22664944-22665091)
chr1 (174-324)||(44024550-44024701)
chr1 (92-324)||(2459013-2459247)
chr1 (100-246)||(10690874-10691025)
chr1 (96-247)||(37437319-37437475)
chr1 (88-317)||(50349764-50349996)
chr1 (100-331)||(6377205-6377431)
chr1 (174-328)||(43738252-43738405)
chr1 (89-324)||(12851746-12851976)
chr1 (100-230)||(48319924-48320055)
chr1 (190-311)||(5854238-5854360)
chr1 (203-324)||(15647091-15647208)
chr1 (100-246)||(30006212-30006363)
chr1 (146-331)||(40060876-40061051)
chr1 (174-294)||(672280-672397)
chr1 (174-324)||(11134458-11134608)
chr1 (191-312)||(35149394-35149516)
chr1 (93-231)||(45749411-45749554)
chr1 (273-328)||(84590-84645)
chr1 (269-328)||(26582926-26582985)
chr1 (269-324)||(38132260-38132315)
chr1 (104-246)||(43105525-43105672)
chr1 (189-247)||(9552368-9552426)
chr1 (100-246)||(43755110-43755260)
chr1 (269-331)||(49894804-49894866)
chr1 (174-246)||(49894864-49894936)
chr1 (269-324)||(1430605-1430660)
chr1 (92-151)||(49426328-49426387)
chr1 (100-158)||(4471326-4471384)
chr1 (93-151)||(26352002-26352060)
chr1 (91-157)||(49468619-49468685)
chr1 (93-158)||(30686810-30686875)
chr1 (267-328)||(48320081-48320141)
chr1 (93-157)||(13408246-13408310)
chr1 (90-126)||(17919986-17920022)
chr1 (90-126)||(50094178-50094214)
chr1 (93-157)||(50591230-50591294)
chr1 (91-126)||(2610993-2611028)
chr1 (90-157)||(10842957-10843024)
chr1 (91-126)||(27720911-27720946)
chr1 (92-126)||(255079-255113)
chr1 (92-126)||(5463783-5463817)
chr1 (89-151)||(34047150-34047212)
chr1 (269-331)||(43755051-43755112)
chr1 (92-126)||(44557207-44557241)
chr1 (88-126)||(49894755-49894793)
chr1 (100-153)||(254830-254883)
chr1 (287-328)||(9552440-9552481)
chr1 (93-126)||(34047400-34047433)
chr1 (92-125)||(35847845-35847878)
chr1 (93-126)||(44024499-44024532)
chr1 (93-126)||(52125046-52125079)
chr1 (269-328)||(9333108-9333168)
chr1 (269-328)||(9356881-9356941)
chr1 (101-157)||(22665113-22665169)
chr1 (269-324)||(24041092-24041148)
[»] chr5 (61 HSPs)
chr5 (90-324)||(14979960-14980186)
chr5 (93-324)||(166561-166796)
chr5 (93-231)||(4967403-4967546)
chr5 (174-324)||(42329542-42329693)
chr5 (93-246)||(31889802-31889960)
chr5 (93-324)||(36660433-36660666)
chr5 (88-327)||(15400174-15400418)
chr5 (174-324)||(793602-793753)
chr5 (174-324)||(33822499-33822650)
chr5 (100-324)||(36783361-36783589)
chr5 (203-328)||(38982172-38982296)
chr5 (103-324)||(4751452-4751678)
chr5 (174-328)||(34171166-34171318)
chr5 (100-324)||(39059812-39060034)
chr5 (92-331)||(43257772-43258005)
chr5 (103-324)||(4742188-4742414)
chr5 (174-328)||(33584971-33585126)
chr5 (198-331)||(32690753-32690885)
chr5 (203-331)||(28640081-28640208)
chr5 (190-324)||(29653526-29653661)
chr5 (96-251)||(4011576-4011734)
chr5 (93-275)||(27652231-27652419)
chr5 (92-324)||(31557251-31557482)
chr5 (203-324)||(4833658-4833780)
chr5 (215-324)||(13066719-13066827)
chr5 (174-368)||(7388190-7388372)
chr5 (100-233)||(12167529-12167667)
chr5 (159-324)||(27810352-27810517)
chr5 (216-324)||(4371369-4371476)
chr5 (152-246)||(8961011-8961104)
chr5 (215-324)||(12992070-12992176)
chr5 (84-157)||(42661843-42661916)
chr5 (89-157)||(26660931-26660999)
chr5 (89-157)||(26932524-26932592)
chr5 (91-157)||(34972560-34972626)
chr5 (197-321)||(33741474-33741597)
chr5 (90-126)||(39504933-39504969)
chr5 (269-328)||(4011728-4011787)
chr5 (146-217)||(34919847-34919918)
chr5 (247-328)||(7731663-7731744)
chr5 (92-157)||(2729697-2729762)
chr5 (87-208)||(8755530-8755651)
chr5 (189-292)||(29044757-29044860)
chr5 (217-324)||(17674214-17674320)
chr5 (91-126)||(36296297-36296332)
chr5 (207-246)||(41566867-41566906)
chr5 (87-150)||(43584293-43584356)
chr5 (95-157)||(21319242-21319304)
chr5 (92-126)||(27658737-27658771)
chr5 (92-125)||(7144791-7144824)
chr5 (93-126)||(15566452-15566485)
chr5 (90-151)||(15567096-15567157)
chr5 (266-331)||(16886084-16886149)
chr5 (95-179)||(24436454-24436543)
chr5 (93-126)||(32963171-32963204)
chr5 (92-157)||(39730123-39730188)
chr5 (269-330)||(41845374-41845435)
chr5 (91-151)||(10344853-10344913)
chr5 (90-126)||(17674160-17674196)
chr5 (90-126)||(29044697-29044733)
chr5 (93-157)||(42103975-42104039)
[»] scaffold0047 (1 HSPs)
scaffold0047 (174-324)||(70451-70602)
[»] scaffold0886 (1 HSPs)
scaffold0886 (174-328)||(4106-4260)
[»] scaffold0580 (2 HSPs)
scaffold0580 (92-213)||(1689-1815)
scaffold0580 (92-213)||(9428-9554)
[»] scaffold0189 (1 HSPs)
scaffold0189 (198-328)||(13081-13210)
[»] scaffold0072 (1 HSPs)
scaffold0072 (88-324)||(11989-12219)
[»] scaffold0194 (1 HSPs)
scaffold0194 (91-324)||(8163-8391)
[»] scaffold0003 (1 HSPs)
scaffold0003 (174-328)||(321727-321882)
[»] scaffold0238 (1 HSPs)
scaffold0238 (147-326)||(16011-16188)
[»] scaffold0519 (1 HSPs)
scaffold0519 (208-328)||(7732-7849)
[»] scaffold0007 (1 HSPs)
scaffold0007 (203-275)||(158154-158225)
[»] scaffold0110 (1 HSPs)
scaffold0110 (93-157)||(24652-24716)
[»] scaffold0060 (1 HSPs)
scaffold0060 (283-328)||(31626-31671)
[»] scaffold0015 (2 HSPs)
scaffold0015 (90-125)||(21248-21283)
scaffold0015 (91-157)||(20991-21057)
[»] scaffold0078 (1 HSPs)
scaffold0078 (104-157)||(1371-1424)


Alignment Details
Target: chr8 (Bit Score: 137; Significance: 2e-71; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 93 - 328
Target Start/End: Complemental strand, 7612737 - 7612499
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||| ||||||||||||||| |||||||  ||||||||||||||||||||||     |||||||||||||||||| ||||||| |||||||||     
T  7612737 tactccctccattttaaaatgagtgttgctttagattttggcacacagattaagaaatagaatgaaataatcattggatataacgcttt-actaaactgc 7612639  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||| |||| |||||||||| | ||||||||||||||||||||||    
T  7612638 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaa-gttggagtatttatttagggtaaagttggaagagaaaact 7612540  T
Q  288 taaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||| ||||||||| |||| |||||| |||||||||||||||    
T  7612539 taatgttgtattgaaaatgtaaagtgacattcattttaaaa 7612499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 93 - 324
Target Start/End: Original strand, 27109732 - 27109968
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||||||||||| ||||||||||||| ||||||  |||||||||| ||||||||||     |||||||||||| ||||| || ||||||||||| |||    
T  27109732 tactccatccgtttcaaaatgagtgtcgttttaggtgttggcacacatattaagaaatagaatgaaataatcattagatataacacttttactaaattgt 27109831  T
Q  188 cctt-actttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
    | || |||||||||| ||| |||||| |||||||||||||| ||||| || ||||||||| |||  |||||||||| | ||||||||||||||| ||||     
T  27109832 cttttactttataagaaaaggacaaacttaaagttgcattggaaattgtgtgagagaaaa-gttagagtatttattgagggtaaagttggaagaaaaaaa 27109930  T
Q  287 ttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||||||||||  ||||| |||||||||||    
T  27109931 ttaaagttgtattggaaatggaaagtgacattcatttt 27109968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 82 - 246
Target Start/End: Complemental strand, 2067951 - 2067782
Alignment:
Q  82 aaattatttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttt 176  Q
    ||||||| || |||||| || |||||||||||||||||||||||||||||| |||| |||||||||||||     ||||||||||| ||||| |||||||    
T  2067951 aaattatatagtactccctcagttttaaaatgagtgtcgctttaggctttgacacatagattaagaaatggaatgaaataatcatttgatataacgcttt 2067852  T
Q  177 tactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    || ||||||| |||||||||||||||||||||| |||||||||||||||| |||||| || ||| |||||    
T  2067851 tattaaactgcccttactttataaggaaaagaccaaattaaagttgcattaaaaattgtgtgagtgaaaa 2067782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 93 - 328
Target Start/End: Complemental strand, 9022636 - 9022396
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||||||||||||||||| ||||| |  | |||||||||||||     | |||||| |||||||| || || || ||||||||||||||     
T  9022636 tactccctccgttttaaaatgagtgtcgttttagccaattgcacacagattaaaaaatggaatgaattaatcattagacataacacttttactaaactgc 9022537  T
Q  188 ccttactttataaggaaaagacaaaatt-aaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
     |||  |||||| | |||||||||| || |||||||||||||||||| || |||| ||||||||| |||||||||| | ||||||||||||||| ||||     
T  9022536 acttgttttatatgaaaaagacaaacttaaaagttgcattgaaaattgtgtgaga-aaaaagttggagtatttattgagggtaaagttggaagaaaaaaa 9022438  T
Q  287 ttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||||||||||||||  |||||| |||||||||||||||    
T  9022437 ttaaagttgtattggaaacgtaaagtgacattcattttaaaa 9022396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 147 - 328
Target Start/End: Complemental strand, 30789116 - 30788936
Alignment:
Q  147 aaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||||||||||||||| || || || |||||| |||| ||||||||||||||||| |||||||||| ||||||||| ||||||||||||| ||||| |||    
T  30789116 aaatgaaataatcattagacataacacttttattaaattgtccttactttataagaaaaagacaaatttaaagttgtattgaaaattatgtgagag-aaa 30789018  T
Q  247 agttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||| |||||||| ||| ||||||||| ||||| |||| |||||||||||||| | || |||||| ||||| |||||||||    
T  30789017 agttggagtatttactaagggtaaagttagaagaaaaaaattaaagttgtattgaatatgtaaagtgacatttattttaaaa 30788936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 147 - 324
Target Start/End: Complemental strand, 22601316 - 22601141
Alignment:
Q  147 aaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||||||||||||||| || || || ||||||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||| || ||||| |||    
T  22601316 aaatgaaataatcattagacataactcttttactaaattgtctttactttataagaaaaagacaaacttaaagttgcattgaaaattctgtgagag-aaa 22601218  T
Q  247 agttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
     |||| |||||||||  | ||||||||||||||| || | ||||||||||||||||||| |||||| |||||||||||    
T  22601217 ggttggagtatttatcgagggtaaagttggaaga-aacaattaaagttgtattggaaatgtaaagtgacattcatttt 22601141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 14541744 - 14541893
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    |||||||||| |  |||||||||||||| | |||||||| |||||||||||||||||||| || ||||||||| ||||||||||||||||| | ||||||    
T  14541744 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgagagagaaaa-gttgaagtatttattaaggataaagt 14541842  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||| |||| ||||||||||||| ||||| |||||| |||||||||||    
T  14541843 tggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcatttt 14541893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 93 - 324
Target Start/End: Original strand, 32326637 - 32326873
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaactgt 187  Q
    |||| ||||||||||||||||||||||||||||| |  | ||||||||||||||     |||||||||||||||| ||  | || ||||||||||||||     
T  32326637 tactacatccgttttaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaatgaaataatcattagacgtaacacttttactaaactgc 32326736  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaa-gagaaaac 286  Q
    ||||  |||||| | |||||||||| |||||||||||||||||||| || |||| ||||||||| ||||||||||   |||||| ||| || || ||||     
T  32326737 ccttgttttatatgaaaaagacaaatttaaagttgcattgaaaattgtgtgaga-aaaaagttggagtatttattgtgggtaaaattgaaaggaaaaaaa 32326835  T
Q  287 ttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||||| |||| |||||| ||||| |||||    
T  32326836 ttaaagttgtattgaaaatgtaaagtgacatttatttt 32326873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 11312354 - 11312266
Alignment:
Q  380 gattattgtggaacaagtaggatagtataaaattcctctagaagaaagtgtagaatataaaattgaaaaacaaaattcagaacaacaat 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  11312354 gattattgtggaacaagtaggatagtataaaattcctctagaagaaggtgtagcatataaaattgaaaaacaaaattcagaacaacaat 11312266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 199 - 328
Target Start/End: Original strand, 3095527 - 3095655
Alignment:
Q  199 aaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtat 298  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||| ||||||||||||||| | ||||||||||| ||  |||| ||||||||||||    
T  3095527 aaggaaaagacaaacttaaagttgcattgaaaagtgtgcgagagaaaa-gttgaagtatttattgagggtaaagttgggaggaaaaaattaaagttgtat 3095625  T
Q  299 tggaaatataaagtaacattcattttaaaa 328  Q
    || |||| ||||||||||||||||||||||    
T  3095626 tgaaaatgtaaagtaacattcattttaaaa 3095655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 93 - 324
Target Start/End: Complemental strand, 36915605 - 36915372
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||||||||||||||||| ||||  |  | ||| |||||||||| ||||     ||||||||||| || || |   |||||||||| ||     
T  36915605 tactccctccgttttaaaatgagtgtcgttttaaccaattgcatacagattaaggaatggaatgaaataatcattagacataatatttttactaaattgc 36915506  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
    ||||  |||||| | |||||||||| |||||||||||||||||||| ||  ||| |||| |||||| |||||||| ||||||||||||||||| |||| |    
T  36915505 ccttgttttatatgaaaaagacaaacttaaagttgcattgaaaattgtg--agaaaaaatgttgaa-tatttattgaaggtaaagttggaagaaaaaaat 36915409  T
Q  288 taaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||||||||| |||| |||||| |||||||||||    
T  36915408 taaagttgtattgaaaatgtaaagtgacattcatttt 36915372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 174 - 328
Target Start/End: Complemental strand, 11257694 - 11257543
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    ||||||||||||  | ||| |||||||| || ||||||| |||||||||||||||||||| || ||||| ||||||||||||||||||| |   ||||||    
T  11257694 ttttactaaactacctttattttataagaaacagacaaacttaaagttgcattgaaaattgtgtgagag-aaaagttgaagtatttattgagattaaagt 11257596  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||  |||||| |||||||||||||  |||| |||||| |||||||||||||||    
T  11257595 tgga--agaaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaa 11257543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 174 - 331
Target Start/End: Complemental strand, 27416657 - 27416499
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga---aaaagttgaagtatttattaaaggtaa 270  Q
    |||||||||| |  |||||||||||||| |||||||||| ||| | |||||||||||||| || | ||||   |||||||| |||||||||| | |||||    
T  27416657 ttttactaaaataaccttactttataagaaaaagacaaacttagaattgcattgaaaattgtgtgtgagagaaaaaagttggagtatttattgagggtaa 27416558  T
Q  271 agttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    ||||||| || |||||| ||||||||||||||||| |||||| ||||||||||| ||||||    
T  27416557 agttggacga-aaaact-aaagttgtattggaaatgtaaagtgacattcattttgaaataa 27416499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 93 - 246
Target Start/End: Complemental strand, 7129522 - 7129359
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaat----------aatcattggatatgacgcttttactaa 182  Q
    |||||| |||||||||||||||||||||||  |||||||| || | ||||||||||||| |||          |||||||| |||| |||||||||||||    
T  7129522 tactccttccgttttaaaatgagtgtcgctgcaggctttgacatatagattaagaaatggaatgaaatagtataatcattgaatataacgcttttactaa 7129423  T
Q  183 actgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||   |||||||||||| | ||||||||||||||||||||||| ||||| || |||||||||    
T  7129422 actgattttactttataagaataagacaaaattaaagttgcattggaaattgtgtgagagaaaa 7129359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 174 - 329
Target Start/End: Original strand, 18673097 - 18673252
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||| || || |||| ||||| ||||| ||| |||||||||| || |||||| |||||||| ||||||||||||||||||||    
T  18673097 ttttactaaaataaccttactt-atcagaaaaatacaaacttaaaattgtattgaaaattgtgtgagagagaaaagttggagtatttattaaaggtaaag 18673195  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaat 329  Q
    |||||||| |||| ||||||| | |||| |||| |||||  ||||||||||||||||    
T  18673196 ttggaagaaaaaaattaaagtcgcattgaaaatgtaaagcgacattcattttaaaat 18673252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 93 - 233
Target Start/End: Original strand, 45187206 - 45187353
Alignment:
Q  93 tactccatccgttttaaa--atgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaact 185  Q
    |||||||||||||||| |  |||||||||||||||| |  | ||||||||||||||      ||||||||||||||| || ||||| |||||||||||||    
T  45187206 tactccatccgttttatatgatgagtgtcgctttagccaattgcacacagattaaggaatataatgaaataatcattagacatgacacttttactaaact 45187305  T
Q  186 gtccttactttataaggaaaagacaaaattaaagttgcattgaaaatt 233  Q
    ||||||  |||||||| |||||||||| |||||||||| |||||||||    
T  45187306 gtccttgttttataagaaaaagacaaacttaaagttgctttgaaaatt 45187353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 201 - 324
Target Start/End: Complemental strand, 32661432 - 32661310
Alignment:
Q  201 ggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattg 300  Q
    |||||||||||| ||||||||| |||||||||| || ||||||||| |||  |||||||||| | ||||||||||| ||| |||| ||||||||||||||    
T  32661432 ggaaaagacaaacttaaagttgtattgaaaattgtgtgagagaaaa-gttagagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattg 32661334  T
Q  301 gaaatataaagtaacattcatttt 324  Q
     |||| || |||||||||||||||    
T  32661333 aaaatgtagagtaacattcatttt 32661310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 203 - 328
Target Start/End: Original strand, 8382505 - 8382629
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||| ||| |||||||||||||||| || ||||||||| |||| ||||| |||| | ||||||||||  ||| |||| |||||||||||||| |    
T  8382505 aaaagacaaacttatagttgcattgaaaattgtgtgagagaaaa-gttggagtatatattgagggtaaagttgagagaaaaaaattaaagttgtattgaa 8382603  T
Q  303 aatataaagtaacattcattttaaaa 328  Q
    ||| |||||| |||||||||||||||    
T  8382604 aatgtaaagtgacattcattttaaaa 8382629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 324
Target Start/End: Original strand, 34461611 - 34461732
Alignment:
Q  205 aagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaac-ttaaagttgtattgga 302  Q
    |||||||| |||||||||||||||||||| || |||| | |||||||| ||| |||||| | ||||||||||||||| ||||  ||||||||||||||||    
T  34461611 aagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtttttattgagggtaaagttggaagaaaaaaaattaaagttgtattgga 34461710  T
Q  303 aatataaagtaacattcatttt 324  Q
    ||| |||||| |||||||||||    
T  34461711 aatgtaaagtgacattcatttt 34461732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 93 - 233
Target Start/End: Original strand, 38328967 - 38329111
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||| ||||||||| ||||||||| |  | |||||||||||||     | ||||||||||||||| || || || ||||||||||||||     
T  38328967 tactccctccgtttcaaaatgagtttcgctttagtcaattgcacacagattaaggaatggaatgaaataatcattagacataacacttttactaaactg- 38329065  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaatt 233  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||    
T  38329066 ccttactttataatcaaaagacaaacttaaagttgcattgaaaatt 38329111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 92 - 246
Target Start/End: Original strand, 11335950 - 11336103
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaat-----aatcattggatatgacgcttttactaaactg 186  Q
    ||||||| || |||| |||||||||||   ||||||||||| |||||||||||||||||| |||     || |||| ||||| || |||||||||||       
T  11335950 atactccctctgtttcaaaatgagtgttattttaggctttgacacacagattaagaaatgtaatgaagtaaccattcgatataacacttttactaaa--- 11336046  T
Q  187 tccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
       |||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  11336047 ---ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaa 11336103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 329
Target Start/End: Complemental strand, 13109143 - 13108988
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  ||||| |||||||| |||||||||| ||||| ||||||| |||||| || |||||| |||||||| |||||||||||| | || ||    
T  13109143 ttttactaaaataaccttattttataagaaaaagacaaatttaaatttgcattaaaaattgtgtgagagagaaaagttggagtatttattaaggatagag 13109044  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaat 329  Q
    |||||||| |||| ||||||||| |||| |||| |||| | ||||||||||| ||||    
T  13109043 ttggaaga-aaaaattaaagttgcattgaaaatgtaaaatgacattcattttgaaat 13108988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 34168210 - 34168353
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    |||||||||| |  |||||||||||||| | |||||||| |||||||||||||||||||| || ||||||| |       |||||| || | ||||||||    
T  34168210 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaaga-------gtatttcttgagggtaaagt 34168302  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||| |||| |||||||||||||| |||| |||||| |||||||||||    
T  34168303 tggaagaaaaaagttaaagttgtattgaaaatgtaaagtgacattcatttt 34168353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 35052587 - 35052472
Alignment:
Q  214 ttaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagt 312  Q
    ||||||||||||||||||||||| |||||| |||| ||  |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||| ||||      
T  35052587 ttaaagttgcattgaaaattatgtgagagagaaaattttgagtatttattgaagggaaagttgaaagaaaaaaattaaagttgtattggaaatgtaaaac 35052488  T
Q  313 aacattcattttaaaa 328  Q
     |||||||||||||||    
T  35052487 gacattcattttaaaa 35052472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 328
Target Start/End: Original strand, 5588440 - 5588625
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcatt-------gaaaattatgcgag 240  Q
    |||||||||||||||  | || ||  ||||||||||||| ||| | |||||||| |||||||||| |||||||| ||||       |||| || || |||    
T  5588440 aatgaaataatcattaaacataacatttttactaaactg-cctcaatttataagaaaaagacaaacttaaagttacattttacattgaaatttgtgtgag 5588538  T
Q  241 agaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||  |||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||| |||| | ||||||| |||||||    
T  5588539 agaaaagtttga-gtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaa 5588625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 203 - 324
Target Start/End: Complemental strand, 39970450 - 39970330
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||| |||||||||||||||||||| ||||||||||||  ||||   | ||| | | ||||||||||| ||| ||||| ||| |||||||||||    
T  39970450 aaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaagtttgagtaaattagtgagggtaaagttgggagaaaaaac-taatgttgtattgga 39970352  T
Q  303 aatataaagtaacattcatttt 324  Q
    ||| ||||||||||||||||||    
T  39970351 aatgtaaagtaacattcatttt 39970330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 24732191 - 24732079
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaaga-----aatgaaataatcattggatatgacgcttttactaaac 184  Q
    |||||||| |||||||||||||||||||||||| ||| ||||| || |||||||||||     ||||||||| ||||||||||| || ||||||||||||    
T  24732191 taatactcaatccgttttaaaatgagtgtcgctgtagactttgacatacagattaagaaattgaatgaaatagtcattggatataacacttttactaaac 24732092  T
Q  185 tgtccttacttta 197  Q
    || || |||||||    
T  24732091 tgcccctacttta 24732079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 6839387 - 6839289
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||||||||||| || || || ||||||||||| || | |||||||||||| ||||||||||  |||| ||||||||||||||||| |||||||||    
T  6839387 aatgaaataatcattagacataacacttttactaaattgcctttactttataagaaaaagacaaacataaaattgcattgaaaattatgtgagagaaaa 6839289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 18666542 - 18666615
Alignment:
Q  173 cttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||||||||||||||||||||||||| ||||||||| | |||||||||||| |||||| || |||||||||    
T  18666542 cttttactaaactgtccttactttataagaaaaagacaacactaaagttgcattaaaaattgtgtgagagaaaa 18666615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 16209096 - 16209023
Alignment:
Q  173 cttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||||| ||| ||||||||| |||||| | |||||||||| ||||||||||||||||||||||| |||||||||    
T  16209096 cttttattaatctgtccttattttataggaaaaagacaaacttaaagttgcattgaaaattatgtgagagaaaa 16209023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 4760467 - 4760535
Alignment:
Q  89 ttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||||||||||||||||||||||||||||||||| |  | ||||| |||||||| ||||||||||    
T  4760467 ttaatactccatccgttttaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaataa 4760535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 29931224 - 29931311
Alignment:
Q  159 cattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||| |||| || |||||| ||||||| | ||| ||||||||  ||||| ||||||||||||||||||||||||||| |||||||||    
T  29931224 cattgaatataacacttttattaaactgcctttattttataagagaaagaaaaaattaaagttgcattgaaaattatgtgagagaaaa 29931311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 33870819 - 33870752
Alignment:
Q  264 aaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    ||||||||||||||||| |||| |||||||||||||| ||||||||||| |||| |||||| ||||||    
T  33870819 aaggtaaagttggaagaaaaaaattaaagttgtattgaaaatataaagtgacatccattttgaaataa 33870752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 41790112 - 41790211
Alignment:
Q  147 aaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||||||||||||||| || || |  |||||| |||| |||| || ||||||||| |||||||||| ||||||||| |||||||||| || |||||||||    
T  41790112 aaatgaaataatcattagacataatacttttattaaattgtctttgctttataagaaaaagacaaatttaaagttggattgaaaattgtgtgagagaaaa 41790211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 8471413 - 8471335
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttg 251  Q
    |||||||||| |  |||||||||||||| |||||||||| |||||||||||||||||||| || |||||| ||||||||    
T  8471413 ttttactaaaataaccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttg 8471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 266 - 328
Target Start/End: Original strand, 38329119 - 38329181
Alignment:
Q  266 ggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||||| |||| |||| |||||||||||||| ||||||||||| |||||||||||||||    
T  38329119 ggtaaagttgaaagaaaaaaattaaagttgtattgaaaatataaagtgacattcattttaaaa 38329181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 328
Target Start/End: Complemental strand, 42946240 - 42946123
Alignment:
Q  210 aaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataa 309  Q
    |||||| |||||||||| |||||| || |||||||||| | || ||||||||| | |||||| ||| |||| |||| |||||||||||||  |||| |||    
T  42946240 aaaattgaagttgcattaaaaattgtgtgagagaaaaattaga-gtatttattgagggtaaaattgaaagaaaaaaattaaagttgtattaaaaatgtaa 42946142  T
Q  310 agtaacattcattttaaaa 328  Q
    | | |||||||||||||||    
T  42946141 aatgacattcattttaaaa 42946123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 1774085 - 1774128
Alignment:
Q  190 ttactttataaggaaaagacaaaattaaagttgcattgaaaatt 233  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  1774085 ttactttataagaaaaagacaaaattaaagttgcattgaaaatt 1774128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 327
Target Start/End: Original strand, 5044224 - 5044378
Alignment:
Q  173 cttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaag 272  Q
    |||||| |||||||  ||||||||||||  |||| ||||| ||||||||| ||| |||||| || || || ||||||||||||||||||| |   |||||    
T  5044224 cttttattaaactgctcttactttataaaaaaaatacaaatttaaagttgtattaaaaattgtgtgatag-aaaagttgaagtatttattgagaataaag 5044322  T
Q  273 ttggaag-agaaaacttaaagttgtattggaaatataaagtaacattcattttaaa 327  Q
    ||||||| | |||| ||||| || ||||| |||| |||| | | ||||||||||||    
T  5044323 ttggaagaaaaaaaattaaaattatattgaaaatgtaaaatgatattcattttaaa 5044378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 1774009 - 1774059
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat 150  Q
    ||||||| |||||||||||| |||||||||||||| |||||||||||||||    
T  1774009 tccgtttcaaaatgagtgtcactttaggctttggcgcacagattaagaaat 1774059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 328
Target Start/End: Original strand, 1774150 - 1774211
Alignment:
Q  267 gtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||||||||| |||| |||||||||||||| |||| |||| | |||||||||||||||    
T  1774150 gtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaattgacattcattttaaaa 1774211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 91 - 331
Target Start/End: Complemental strand, 41415074 - 41414840
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaact 185  Q
    |||||||||||||||||||||| | ||||| ||||| |  | ||||| | ||||||     |||||||||||||||| ||  | || |||||||||| ||    
T  41415074 aatactccatccgttttaaaataaatgtcgttttagccaattgcacatatattaaggaatgaaatgaaataatcattagacgtaacacttttactaa-ct 41414976  T
Q  186 gtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaa 285  Q
    | ||||| |||||||  |||  | ||  |||||||||||||||||||| || |||| |||||||||| |         |||||||| |||||||| ||||    
T  41414975 gcccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgaga-aaaaagttgagg---------aaggtaaaattggaagaaaaaa 41414886  T
Q  286 cttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
     |||||||  ||||  ||||||||||| ||||| ||||||||||||    
T  41414885 attaaagtgatattaaaaatataaagtgacatttattttaaaataa 41414840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 32271624 - 32271510
Alignment:
Q  214 ttaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagt 312  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||||||| |  ||||| |||||||| |||| ||||| ||  |||| |||| ||||      
T  32271624 ttaaaattgcattgaaaattatgtgagagataaaagttgaagtatttatt-agcgtaaaattggaagaaaaaaattaaaattacattgaaaatgtaaaaa 32271526  T
Q  313 aacattcattttaaaa 328  Q
     | |||||||||||||    
T  32271525 gatattcattttaaaa 32271510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 325
Target Start/End: Complemental strand, 43938246 - 43938124
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggt-aaagttggaagagaaaacttaaagttgtattgg 301  Q
    |||||| ||| ||||||||||||| |||| | |||||||| |||||||| |||||||||| || || ||| || ||| | |||| |||||||| |||| |    
T  43938246 aaaagataaacttaaagttgcattaaaaagtgtgcgagag-aaaagttggagtatttattgaatgtaaaatttagaaaaaaaaaattaaagttctattcg 43938148  T
Q  302 aaatataaagtaacattcatttta 325  Q
    |||| ||||||  |||||||||||    
T  43938147 aaatgtaaagtggcattcatttta 43938124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 7129361 - 7129299
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |||||||||||| |||| ||||||||| |||| |||| |||||| ||||||||||| ||||||    
T  7129361 aaagttggaagaaaaaaattaaagttgcattgaaaatgtaaagtgacattcattttgaaataa 7129299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 4530107 - 4530050
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat 150  Q
    |||||||||||||| ||||||||||||| ||||| |  | ||||||||||||||||||    
T  4530107 tactccatccgtttcaaaatgagtgtcgttttagccaattgcacacagattaagaaat 4530050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 8471500 - 8471435
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||| | ||||| ||||||||||||||||||| |  | ||||| |||||||||||||||||||    
T  8471500 atactcccttcgtttcaaaatgagtgtcgctttagccaattgcacatagattaagaaatgaaataa 8471435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 328
Target Start/End: Original strand, 29931322 - 29931383
Alignment:
Q  267 gtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||| ||||| |||| ||||||||||||||||||| |||||| | ||| |||||||||    
T  29931322 gtaaagttagaagaaaaaaattaaagttgtattggaaatgtaaagtgatatttattttaaaa 29931383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 37185679 - 37185734
Alignment:
Q  204 aaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtattta 260  Q
    ||||||||| |||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  37185679 aaagacaaacttaaagttgcattgaaaaatatacgagag-aaaagttggagtattta 37185734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 396136 - 396195
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg 151  Q
    ||||||||||||||| ||||||||||||| ||||||  ||  |||||| |||||||||||    
T  396136 atactccatccgtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatg 396195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 8471341 - 8471286
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||| |||| ||||||||| ||||||||| |||||  |||||||||||    
T  8471341 aaagttggaagaaaaaaattaaagttgcattggaaatgtaaagcgacattcatttt 8471286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 11168925 - 11168866
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg 151  Q
    ||||||| ||||||| ||||||||||||||||||| | ||  ||||||||||||| ||||    
T  11168925 atactccctccgtttcaaaatgagtgtcgctttagccattttcacacagattaaggaatg 11168866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 18666613 - 18666668
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||| ||||  |||||||| ||||||||| |||||| |||||||||||    
T  18666613 aaagttggaagaaaaaaactaaagttgcattggaaatgtaaagtgacattcatttt 18666668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 42709991 - 42710046
Alignment:
Q  178 actaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaatt 233  Q
    |||||||| |||||||||||| |  |||||| |||||||||||||| |||||||||    
T  42709991 actaaactatccttactttattaaaaaaagataaaattaaagttgcgttgaaaatt 42710046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 14541946 - 14541912
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||| |||||||||||||||||||||||||||    
T  14541946 atactccttccgttttaaaatgagtgtcgctttag 14541912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 156303 - 156246
Alignment:
Q  267 gtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||| ||| |||| |||||||| |||||| ||| |||||| |||||||||||    
T  156303 gtaaagttgggagaaaaaaattaaagttatattgggaatgtaaagtgacattcatttt 156246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 2812870 - 2812817
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatt 322  Q
    |||||| | ||| |||| ||||||||||||||||||| ||||| ||||||||||    
T  2812870 aaagttaggagaaaaaaattaaagttgtattggaaatgtaaagcaacattcatt 2812817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 8382399 - 8382432
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||||||||||| |||||    
T  8382399 tactccatccgttttaaaatgagtgtcgttttag 8382432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 9880420 - 9880477
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||| ||||||||||||||||||  |  | ||||||||||||||||||| |||||    
T  9880420 tccgtttcaaaatgagtgtcgctttaaccaattgcacacagattaagaaatggaataa 9880477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 264
Target Start/End: Complemental strand, 32737945 - 32737831
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtcctt-actttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||||| ||||| ||||| || |||||  ||||||| |||| |||||||||| |||||| ||| ||||| ||||||||||||||||  || || |||    
T  32737945 aatgaaata-tcattagatataacacttttgttaaactgccctttactttataagaaaaagaaaaacttaaa-ttgcattgaaaattatatgaaag-aaa 32737849  T
Q  247 agttgaagtatttattaa 264  Q
    |||||  |||||||||||    
T  32737848 agttggcgtatttattaa 32737831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 37559732 - 37559699
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||| |||||||||||||||||||    
T  37559732 tactccatccgtttcaaaatgagtgtcgctttag 37559699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 18673300 - 18673264
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  18673300 taatactccatccgtttcaaaatgagtgtcgttttag 18673264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 331
Target Start/End: Complemental strand, 26439036 - 26438973
Alignment:
Q  268 taaagttggaagagaaaac-ttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    ||||||||||||| ||||  |||||||||||| |||||| ||||||  |||||||||||||||||    
T  26439036 taaagttggaagaaaaaaaattaaagttgtat-ggaaatgtaaagtggcattcattttaaaataa 26438973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 32061515 - 32061575
Alignment:
Q  268 taaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||||||||| || | ||||| |||||| | |||| |||||| |||||||||||||||    
T  32061515 taaagttggaagaaaataattaaatttgtatagaaaatgtaaagtgacattcattttaaaa 32061575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 34461494 - 34461558
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||| | ||||| ||||||||||||||||||| |  | | |||||||||||| ||||||||||    
T  34461494 tactccttacgtttcaaaatgagtgtcgctttagccaattgtacacagattaaggaatgaaataa 34461558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 35052422 - 35052458
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  35052422 taatactccctccgtttcaaaatgagtgtcgctttag 35052458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 39463498 - 39463434
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||| ||||||| ||||||||||||||||||| |  | ||||||| |||||| |||| |||||    
T  39463498 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataa 39463434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 9e-68; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 93 - 323
Target Start/End: Complemental strand, 44855481 - 44855245
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||| |||||||| ||||||||| ||||||||||||| ||||||||||     ||||||||||||| |||| |||||||||||||||||     
T  44855481 tactccctccgtttcaaaatgagcgtcgctttacgctttggcacacaaattaagaaatagaatgaaataatcattgaatataacgcttttactaaactgc 44855382  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaag--ttggaagagaaaa 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| | |||||||| | |||||||  |||||||||||||    
T  44855381 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattgtgtgagag-aaaagttggattatttattgagggtaaagaattggaagagaaaa 44855283  T
Q  286 cttaaagttgtattggaaatataaagtaacattcattt 323  Q
    |||||||||||||||||||| |||||| ||||| ||||    
T  44855282 cttaaagttgtattggaaatgtaaagtgacatttattt 44855245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 102 - 328
Target Start/End: Complemental strand, 52732819 - 52732597
Alignment:
Q  102 cgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactgtccttacttt 196  Q
    |||||||||||||||| || ||||||||||| |||| |||||||     | ||||||||||||||||||||| || |||||||||||||| |||||||||    
T  52732819 cgttttaaaatgagtgacgttttaggctttgacacatagattaaaaaatggaatgaaataatcattggatataacacttttactaaactgcccttacttt 52732720  T
Q  197 ataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaag-agaaaacttaaagttg 295  Q
    ||||||||||||||||||||||||||||||||||||| || ||||| ||||||||  |         | |||||||||||||| | |||| |||||||||    
T  52732719 ataaggaaaagacaaaattaaagttgcattgaaaattgtgtgagag-aaaagttgggg---------agggtaaagttggaagaaaaaaaattaaagttg 52732630  T
Q  296 tattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||||| |||||| |||||||||||||||    
T  52732629 tattggaaatgtaaagtgacattcattttaaaa 52732597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 146 - 328
Target Start/End: Complemental strand, 37445839 - 37445658
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaa 245  Q
    ||||||||||||||||| || || || |||||||||||||| |||||||||||||| |||||||||| ||||||||||||| ||||||||| || |||||    
T  37445839 gaaatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaaatttaaagttgcattaaaaattatgtgaaagaaa 37445740  T
Q  246 aagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    || ||||| |||||||| | ||||||||||||||| |||| |||||||||||||  |||| |||| | |||||||||||||||    
T  37445739 aatttgaa-tatttattgagggtaaagttggaagaaaaaaattaaagttgtattaaaaatgtaaaatgacattcattttaaaa 37445658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 100 - 230
Target Start/End: Original strand, 56422921 - 56423056
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttactaaactgtccttact 194  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||     |||||||||||||||||| ||||||||||||||||||| |||||    
T  56422921 tccgtttcaaaatgagtgtcgctttaggctttgacacacagattaagaaatcgaatgaaataatcattggatataacgcttttactaaactgtctttact 56423020  T
Q  195 ttataaggaaaagacaaaattaaagttgcattgaaa 230  Q
    ||||||| ||||||| |||||||| |||||||||||    
T  56423021 ttataagaaaaagacgaaattaaaattgcattgaaa 56423056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 100 - 246
Target Start/End: Complemental strand, 21045361 - 21045212
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactgtccttact 194  Q
    ||||||| |||||||||||||||||||||||||  |||||||||||     | ||||||||||||||||||||| | ||||||| ||||||| |||||||    
T  21045361 tccgtttcaaaatgagtgtcgctttaggctttg--acacagattaaggaatggaatgaaataatcattggatataaggcttttattaaactgcccttact 21045264  T
Q  195 ttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  21045263 ttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaa 21045212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 203 - 331
Target Start/End: Complemental strand, 31987426 - 31987299
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||| | ||||||||||||||| |||| ||||||||||||| ||    
T  31987426 aaaagacaaatttaaagttgcattgaaaattatgcgagagaaaa-gttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattaga 31987328  T
Q  303 aatataaagtaacattcattttaaaataa 331  Q
    ||| |||||| ||||||||||||||||||    
T  31987327 aatgtaaagtgacattcattttaaaataa 31987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 174 - 328
Target Start/End: Complemental strand, 19849235 - 19849082
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    ||||||||||||| ||| |||||||||| |||| ||||| |||||||||||||||||||| || ||||||||| |||| |||||||||| | ||||||||    
T  19849235 ttttactaaactgccctcactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagaaaa-gttggagtatttattgagggtaaagt 19849137  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||| |||| ||||||||||||||||| | |||||| | |||||||||||||    
T  19849136 tggaagaaaaaaattaaagttgtattggaattgtaaagtgaaattcattttaaaa 19849082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 146 - 324
Target Start/End: Complemental strand, 30022246 - 30022070
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaa 245  Q
    ||||| |||||||||||  |||| || |||||||||||||  ||||  | |||||| |||||||||| | |||||||||||||||||| || ||||||||    
T  30022246 gaaataaaataatcattatatataacacttttactaaacta-ccttcttgtataagaaaaagacaaactcaaagttgcattgaaaattgtgtgagagaaa 30022148  T
Q  246 aagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    | ||||||||||||||| | ||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||    
T  30022147 a-gttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtcaagtaacattcatttt 30022070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 188 - 328
Target Start/End: Complemental strand, 31941697 - 31941556
Alignment:
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa-agttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
    |||||||||||||| | |||||||| ||||||||||||||||||||||| |||||| || ||||| |||||||||| | ||||||||||||||| ||||     
T  31941697 ccttactttataagaacaagacaaacttaaagttgcattgaaaattatgtgagagagaatagttggagtatttattgagggtaaagttggaagaaaaaaa 31941598  T
Q  287 ttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||||||||| |||| |||||| |||||||||||||||    
T  31941597 ttaaagttgtattgaaaatgtaaagtgacattcattttaaaa 31941556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 43421036 - 43421197
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaaac 184  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||||||||| |||||||||||     ||||||||||||||||| |  |||||||||||     
T  43421036 taatactccatccgtttcaaaatgagtgttgctttaaactttggcacacaaattaagaaatggaatgaaataatcattggatataatacttttactaaat 43421135  T
Q  185 tgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||  ||||||||||||| ||||||||||||||||||||||||||| ||| || |||||||||    
T  43421136 tgctcttactttataagaaaaagacaaaattaaagttgcattgaatattgtgtgagagaaaa 43421197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 90 - 324
Target Start/End: Complemental strand, 24259853 - 24259613
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa-----tcattggatatgacgcttttactaaac 184  Q
    ||||||| ||||||||||||||||||||||||||||  |  | ||||| | |||||| ||||||||||     |||   |  || ||  ||||||||||     
T  24259853 taatacttcatccgttttaaaatgagtgtcgctttatccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaa 24259754  T
Q  185 tgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaa 283  Q
    |  |||||||||||||| ||| |||||| |||||||||||||||||||| || |||||| |||||||| |||||||||| | ||||||||||||||| ||    
T  24259753 taaccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaa 24259654  T
Q  284 aacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    || ||||||||| ||||||||| |||||| |||||||||||    
T  24259653 aaattaaagttgcattggaaatgtaaagtgacattcatttt 24259613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 93 - 246
Target Start/End: Original strand, 31817114 - 31817273
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||| || |||| ||||| ||||||||||||||||||| |||||| |||||||||||     ||||||||||||||||| ||| ||||||||||||      
T  31817114 tactccctctgtttcaaaattagtgtcgctttaggctttgacacacaaattaagaaatggaatgaaataatcattggatataacgtttttactaaacttc 31817213  T
Q  188 ccttactttataag-gaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||||||||||  |||| |||||||||||||||||||||||||| || |||||||||    
T  31817214 ccttactttataagaaaaaatacaaaattaaagttgcattgaaaattgtgtgagagaaaa 31817273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 93 - 328
Target Start/End: Complemental strand, 22212578 - 22212339
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaactgt 187  Q
    ||||||||||||||||||||| |||||||||||| |  | | ||||| ||||||     |||||||||||||||| || || || ||||||| ||||||     
T  22212578 tactccatccgttttaaaatgggtgtcgctttagccaattgaacacatattaaggaatgaaatgaaataatcattagacataacacttttacaaaactgc 22212479  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
    | ||  ||||||   ||||  |||| ||||||||| |||||||||| || |||| |||| |||| |||||||||| | ||||||||||||||| |||| |    
T  22212478 ctttgttttatataaaaaactcaaacttaaagttgtattgaaaattgtgtgaga-aaaatgttggagtatttattgagggtaaagttggaagaaaaaaat 22212380  T
Q  288 taaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||| |||||||||| ||| || |||||||||||||||    
T  22212379 taaagttatattggaaatgtaaggtgacattcattttaaaa 22212339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 174 - 328
Target Start/End: Complemental strand, 47321298 - 47321142
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| |||||||||  |||||||||||||||||||| |||||| || |||||||  |||||||||| | |||||||    
T  47321298 ttttactaaaataaccttactttataagaaaaagacaaccttaaagttgcattgaaaattgtgcgagtgagaaaagttagagtatttattgagggtaaag 47321199  T
Q  273 ttggaag-agaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||| | |||| |||||||||||||| |||| |||||| |||||||||||||||    
T  47321198 ttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaa 47321142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 95 - 324
Target Start/End: Complemental strand, 34096251 - 34096017
Alignment:
Q  95 ctccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactgtcc 189  Q
    ||||||||||||||| |||||||||| |||||||  | ||||||| |||||     ||||||||||||||||| ||  | || ||||||||||| || ||    
T  34096251 ctccatccgttttaagatgagtgtcgttttaggcaattgcacacaaattaaaaaatgaaatgaaataatcattagacttaacacttttactaaattgccc 34096152  T
Q  190 ttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttg-gaagagaaaactt 288  Q
    |||||||||||| |||||||||| |||||||| ||||||||||| || |||||||||  ||||| |||||||| | ||||||||||  || | |||| ||    
T  34096151 ttactttataagaaaaagacaaacttaaagtttcattgaaaattgtgtgagagaaaagtttgaa-tatttattgagggtaaagttgaaaaaaaaaaaatt 34096053  T
Q  289 aaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||| ||||||| ||||| |||| | |||||| ||||    
T  34096052 aaaattgtattagaaatgtaaattgacattcgtttt 34096017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 152 - 331
Target Start/End: Original strand, 45520437 - 45520614
Alignment:
Q  152 aaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttg 251  Q
    ||||||||||| || || || |||||||||| ||| |||||| ||||||| | |||||||| ||||||||||||| |||||| |  ||||| |||||||     
T  45520437 aaataatcattagacataacacttttactaagctgcccttacattataagaataagacaaacttaaagttgcattaaaaattgtatgagag-aaaagttt 45520535  T
Q  252 aagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
     ||||||||| || | ||||||||||||| |||| |||||||||||||| |||| |||||| ||||||||||||||||||    
T  45520536 gagtatttatcaaggataaagttggaaga-aaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaataa 45520614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 93 - 331
Target Start/End: Complemental strand, 54512260 - 54512027
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaat-----aatcattggatatgacgcttttactaaactgt 187  Q
    |||| |||| |||| ||||||||| ||||||||| ||||| |||||| |||||||||||||||     ||| ||||||||| ||| |||||||||||||     
T  54512260 tacttcatctgtttcaaaatgagtatcgctttagtctttgacacacatattaagaaatgaaatgaaataataattggatataacgtttttactaaactgc 54512161  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
     ||||||||||||| ||| ||||||||||||||||||||||| ||| || ||||| |||||||| ||         | | ||||||||||||| |||| |    
T  54512160 tcttactttataagaaaatgacaaaattaaagttgcattgaacattgtgtgagag-aaaagttggag---------aggataaagttggaagataaaaat 54512071  T
Q  288 taaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    ||||||| ||||  |||| |||||| | ||||||||||||||||    
T  54512070 taaagttatattaaaaatgtaaagtgatattcattttaaaataa 54512027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 174 - 331
Target Start/End: Complemental strand, 28116398 - 28116240
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| | |||||||| |||||||| || |||||||| || | |||| |||||||  |||||||||||| |||||||    
T  28116398 ttttactaaaataaccttactttataagaataagacaaacttaaagttacactgaaaattgtgtgtgagagaaaagtttgagtatttattaagggtaaag 28116299  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |||||||| |||| ||||||||||||||||||| |||||| ||||| ||||| ||||||    
T  28116298 ttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacatttattttgaaataa 28116240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 51930753 - 51930655
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||| || |||||||||    
T  51930753 aatgaaataataattggatataacgcttttactaaactgcccttactttataagaaaatgacaaaattaaagttgcattgaaaattgtgtgagagaaaa 51930655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 146 - 246
Target Start/End: Complemental strand, 34360184 - 34360084
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaa 245  Q
    ||||||||||||||||| ||||| || |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| || ||||||||    
T  34360184 gaaatgaaataatcattagatataacacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaa 34360085  T
Q  246 a 246  Q
    |    
T  34360084 a 34360084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 91 - 328
Target Start/End: Original strand, 36805364 - 36805597
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaact 185  Q
    |||||||| || |||||||||||||||||| ||||    ||| |||||||||||||     |||||||||||||||| || || || |||||||||||||    
T  36805364 aatactccttctgttttaaaatgagtgtcgttttactaattg-cacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaact 36805462  T
Q  186 gtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaa 285  Q
    ||||||| |||||| | |||||||||| ||||||||| |||||||||| || |||| ||||||||| ||       | | | ||||||||||||| ||||    
T  36805463 gtccttagtttatatgaaaaagacaaacttaaagttgtattgaaaattgtgtgaga-aaaaagttggag-------tgaggttaaagttggaagaaaaaa 36805554  T
Q  286 cttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
     |||||||||||||| |||| |||| |||||| ||||||||||    
T  36805555 attaaagttgtattgcaaatgtaaaataacatacattttaaaa 36805597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 174 - 328
Target Start/End: Complemental strand, 34124448 - 34124293
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| |||| ||||| ||||||||| |||||||||| || |||||| |||||||  |||||||||| | |||||||    
T  34124448 ttttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggtaaag 34124349  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||| |||| ||||||||| |||| |||| |||||  |||||||||||||||    
T  34124348 ttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacattcattttaaaa 34124293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 50072492 - 50072332
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagatt---aagaaatg-----aaataatcattggatatgacgcttttactaaa 183  Q
    ||||||| ||||||| ||||||||||||||||||| |||||| |||||||||   ||||||||     ||||||||||||||||| ||| ||||||||||    
T  50072492 atactccctccgtttcaaaatgagtgtcgctttagactttggtacacagatttataagaaatggaatgaaataatcattggatataacgtttttactaaa 50072393  T
Q  184 ctgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttg 251  Q
    ||| |||||||||||      ||||||||||||||||||||||||||||| || |||| |||||||||    
T  50072392 ctgcccttactttat------aagacaaaattaaagttgcattgaaaattgtgtgaga-aaaaagttg 50072332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 90 - 324
Target Start/End: Original strand, 17499627 - 17499867
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa-----tcattggatatgacgcttttactaaac 184  Q
    ||||||||  ||||||||||||||||||||| ||||| |  | |||||||||||||  ||||||||||     |||   |  || ||  ||||||||||     
T  17499627 taatactctctccgttttaaaatgagtgtcgttttagtcaattgcacacagattaatgaatgaaataaaatagtcaaatgtcataacaattttactaaaa 17499726  T
Q  185 tgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaa 283  Q
    |  | |||||||||||| |||||||||| |||||||||||||||||||| |  |||||| |||||||  |||||||||| | ||||||||||||||| ||    
T  17499727 taacattactttataagaaaaagacaaacttaaagttgcattgaaaattgtatgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaa 17499826  T
Q  284 aacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    || ||||| ||| ||||||||| |||||  |||||||||||    
T  17499827 aaattaaaattgcattggaaatgtaaagcgacattcatttt 17499867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 331
Target Start/End: Original strand, 29289921 - 29290047
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||| ||||| |||||||||||||| || ||||||||| ||||||||||||||| | ||||||||| ||||| |||| || ||||||||||| |    
T  29289921 aaaagacaaacttaaaattgcattgaaaattgtgtgagagaaaa-gttgaagtatttattga-ggtaaagtttgaagaaaaaaattgaagttgtattgaa 29290018  T
Q  303 aatataaagtaacattcattttaaaataa 331  Q
    |||||||||| ||||| ||||||||||||    
T  29290019 aatataaagtgacattaattttaaaataa 29290047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 174 - 305
Target Start/End: Complemental strand, 45889716 - 45889584
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| |||| ||||| |||||||||||||||||||| || |||||| |||||||| |||||||||| | |||||||    
T  45889716 ttttactaaaataaccttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaag 45889617  T
Q  273 ttggaagagaaaacttaaagttgtattggaaat 305  Q
    | |||||| |||| |||||||||||||| ||||    
T  45889616 taggaagaaaaaagttaaagttgtattgaaaat 45889584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 188 - 328
Target Start/End: Original strand, 51434270 - 51434411
Alignment:
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
    |||||||||||||| ||||||| || || ||||||||||||||||| || |||||| ||||||| ||||||||||| | ||||||||| ||||  ||||     
T  51434270 ccttactttataagaaaaagactaactttaagttgcattgaaaattgtgtgagagagaaaagttaaagtatttattgagggtaaagtttgaaggaaaaaa 51434369  T
Q  287 ttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||||| ||| ||||| |||||  |||||||||||||||    
T  51434370 ttaaagttgcattagaaatgtaaagcgacattcattttaaaa 51434411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 324
Target Start/End: Original strand, 15501129 - 15501295
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa 247  Q
    ||||||||||||||| || || ||  ||||||||||||| |||||||||||||| |||| ||||| ||||||||||||| |||||| || ||||| ||||    
T  15501129 aatgaaataatcattagacataacatttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattaaaaattgtgtgagag-aaaa 15501227  T
Q  248 gttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||         |  |||| ||||||||| |||| ||||||||||||||||||| |||||| |||||||||||    
T  15501228 gttgaag---------agagtaatgttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 15501295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 312
Target Start/End: Complemental strand, 42672566 - 42672404
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa 247  Q
    ||||||||||||||| || || || |||||||||||||   | ||||||||||| |||||||||| ||||||||| |||||||||| ||  |||| | ||    
T  42672566 aatgaaataatcattagacataacacttttactaaactactcatactttataagaaaaagacaaatttaaagttgtattgaaaattgtgtaagag-agaa 42672468  T
Q  248 gttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagt 312  Q
    ||||||||||||||| | ||||||||||| ||| |||| |||||| || |||| |||||||||||    
T  42672467 gttgaagtatttattgagggtaaagttgggaga-aaaaattaaaggtgcattgaaaatataaagt 42672404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 203 - 328
Target Start/End: Complemental strand, 54092080 - 54091956
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||| |||| |||||||||| | ||||||||||  ||| |||| |||||||||||||  |    
T  54092080 aaaagacaaacttaaaattgtattgaaaattatgcgagagaaaa-gttggagtatttattgagggtaaagttgagagaaaaaaattaaagttgtattaaa 54091982  T
Q  303 aatataaagtaacattcattttaaaa 328  Q
    ||| |||| | |||||||||||||||    
T  54091981 aatctaaattgacattcattttaaaa 54091956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 84 - 324
Target Start/End: Original strand, 19282314 - 19282560
Alignment:
Q  84 attatttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa-----tcattggatatgacgctttta 178  Q
    |||| ||||||||| ||||||||||||||||| |||||||||| |  | |||||| ||||||| |||| |||||     |||   |  || ||  |||||    
T  19282314 attaattaatactcgatccgttttaaaatgagcgtcgctttagccaattgcacacggattaaggaatggaataaagtagtcaaatgtcataacaatttta 19282413  T
Q  179 ctaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttgga 277  Q
    ||||| |  |||||||||||||  | |||||||| ||||| ||| |||  ||||| || |||||| |||||||  |||||||||| ||||||||||||||    
T  19282414 ctaaaataaccttactttataaa-acaagacaaacttaaaattgtattagaaattgtgtgagagagaaaagttagagtatttattgaaggtaaagttgga 19282512  T
Q  278 agagaaaac-ttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||| ||||  ||||||||||||||||||| |||||| |||||||||||    
T  19282513 agaaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 19282560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 86 - 331
Target Start/End: Complemental strand, 3093591 - 3093348
Alignment:
Q  86 tatttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttact 180  Q
    ||||| ||||||||||| |||||||| || ||| | |||| | ||||||||| ||||||||||||      ||||||||||| || || || |||| | |    
T  3093591 tattttatactccatccattttaaaacgaatgttg-tttaagatttggcacatagattaagaaattgaataaaataatcattagacataacactttcatt 3093493  T
Q  181 aaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaaga 280  Q
    ||| ||||||| ||||||||| |||| | ||| |||||||||||| | ||||| || ||||||||| ||||||||||||||| ||  ||||||||   ||    
T  3093492 aaattgtccttcctttataagaaaaa-agaaatttaaagttgcatcggaaattgtgtgagagaaaa-gttgaagtatttattgaa-ataaagttg---ga 3093399  T
Q  281 gaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |||||   |||||| ||||| |||| |||||| ||||||||||||||||||    
T  3093398 gaaaaaaaaaagttatattgaaaatgtaaagtgacattcattttaaaataa 3093348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 322
Target Start/End: Complemental strand, 30492851 - 30492732
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaa-ttatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgg 301  Q
    |||||||||| ||||||||||||| |||| || ||| |||||||| |||| |||||||||| | ||||||||||| ||| |||| ||||||||||||||     
T  30492851 aaaagacaaacttaaagttgcattaaaaaattgtgcaagagaaaa-gttggagtatttattgagggtaaagttgggagaaaaaaattaaagttgtattga 30492753  T
Q  302 aaatataaagtaacattcatt 322  Q
    |||| |||||| |||||||||    
T  30492752 aaatgtaaagtgacattcatt 30492732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 174 - 328
Target Start/End: Complemental strand, 55126650 - 55126495
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| | |||||||| |||||||||||  ||||||| ||   |||| |||||||  ||||||| || | |||| ||    
T  55126650 ttttactaaaataaccttactttataagaataagacaaacttaaagttgcaaggaaaattgtgtaggagagaaaagttagagtatttttttagggtagag 55126551  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    || |||||||||| |||||||||||||| |||| |||| | |||||||||||||||    
T  55126550 ttagaagagaaaaattaaagttgtattgaaaatttaaaatgacattcattttaaaa 55126495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 91 - 246
Target Start/End: Original strand, 56556192 - 56556349
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaat--aatcattggatatgacgcttttactaaactgtc 188  Q
    |||||||| ||||||||||||||||||||||||||  |  | |||||||||||||| |||  |||  ||||||| || || || ||||||||||| | ||    
T  56556192 aatactccctccgttttaaaatgagtgtcgctttaaccaattgcacacagattaaggaattgaatgaaatcattagacataacacttttactaaattatc 56556291  T
Q  189 cttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||| ||||||||| |||| ||||| ||||  || ||||||||||| || |||||||||    
T  56556292 cttgctttataagaaaaatacaaacttaacattacattgaaaattgtgtgagagaaaa 56556349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 312
Target Start/End: Complemental strand, 35928641 - 35928505
Alignment:
Q  173 cttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaag 272  Q
    ||||||||||| || | | |||||||||| |||||| ||| ||||| |||||||||||||| ||  |||   || |||| |||||||||| | |||||||    
T  35928641 cttttactaaattgccatgactttataagaaaaagataaacttaaaattgcattgaaaattgtgaaaga---aacgttgcagtatttattgagggtaaag 35928545  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagt 312  Q
    |||||||| |||| |||||||||||||| |||| ||||||    
T  35928544 ttggaagaaaaaaattaaagttgtattgaaaatgtaaagt 35928505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 324
Target Start/End: Complemental strand, 6510253 - 6510120
Alignment:
Q  190 ttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaactta 289  Q
    |||||||||||  |||||||||| ||||| || |||| |||||| ||  |||||||| || || ||||||||| | ||||||||||  ||| |||| |||    
T  6510253 ttactttataataaaaagacaaacttaaaattacattaaaaattgtgtaagagaaaaggtgga-gtatttattgagggtaaagttgagagaaaaaagtta 6510155  T
Q  290 aagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||||||| ||||||||||| ||||| |||||    
T  6510154 aagttgtattgaaaatataaagtgacatttatttt 6510120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 202 - 331
Target Start/End: Complemental strand, 11835228 - 11835102
Alignment:
Q  202 gaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgg 301  Q
    ||||||| ||| |||||||||||||||||||| || |||||||   ||||| ||||||||| |||||||| ||| |||| |||| |||||||| ||||      
T  11835228 gaaaagataaacttaaagttgcattgaaaattgtgtgagagaag--gttga-gtatttattgaaggtaaatttgaaagaaaaaaattaaagttatattaa 11835132  T
Q  302 aaatataaagtaacattcattttaaaataa 331  Q
    |||| |||||| ||||||||||| ||||||    
T  11835131 aaatgtaaagtgacattcattttgaaataa 11835102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 32140961 - 32141059
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||||||||||| || || || |||||||||||||| || ||||||||||  ||||||||||  |||| |||||||||||||| || |||||||||    
T  32140961 aatgaaataatcattagacataacacttttactaaactgcccctactttataaacaaaagacaaacataaatttgcattgaaaattgtgtgagagaaaa 32141059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 4408176 - 4408328
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  ||||||| |||||| |||||||||| ||||| |||||||||||||| || |||||| |||||||  || ||||||| | | |||||    
T  4408176 ttttactaaaataaccttactatataagaaaaagacaaacttaaaattgcattgaaaattgtgtgagagagaaaagtttgagcatttattgaggttaaag 4408275  T
Q  273 ttggaag-agaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    | ||||| |||||| ||||||||| ||||  ||| |||||  |||||||||||    
T  4408276 tcggaagaagaaaaattaaagttgcattgagaatgtaaagcgacattcatttt 4408328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 188 - 324
Target Start/End: Complemental strand, 6462153 - 6462011
Alignment:
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga---aaaagttgaagtatttattaaag---gtaaagttggaagag 281  Q
    |||||||||||||| | || ||||| |||||||||||||||| ||| || || | |   |||||||  |||||||||| | |   ||||||||||||||     
T  6462153 ccttactttataagaacaaaacaaacttaaagttgcattgaatattgtgtgaaatagataaaagtttgagtatttattgaggagggtaaagttggaagaa 6462054  T
Q  282 aaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||| ||||||||||||||||||| |||||  |||||||||||    
T  6462053 aaaaattaaagttgtattggaaatgtaaagcgacattcatttt 6462011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 147 - 320
Target Start/End: Original strand, 17317821 - 17317989
Alignment:
Q  147 aaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||| ||||||||||| || ||  | |||||||||||||   ||||||||||||| ||| |||||| ||     ||||||||||||| || |||| ||||    
T  17317821 aaataaaataatcattagacattgctcttttactaaactacgcttactttataagaaaaggacaaattt-----tgcattgaaaattgtgtgagataaaa 17317915  T
Q  247 agttgaagtatttattaaaggtaaagttggaagagaaaac-ttaaagttgtattggaaatataaagtaacattca 320  Q
      |||| ||||||||| |||||||||||| |||| ||||  ||||||||||||||||||| ||| || |||||||    
T  17317916 gtttga-gtatttattgaaggtaaagttgaaagaaaaaaaattaaagttgtattggaaatgtaatgtgacattca 17317989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 324
Target Start/End: Complemental strand, 29840166 - 29840077
Alignment:
Q  235 tgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaac-ttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||| |||| |||||||||| | ||||||||||| ||| ||||  ||||||||||||||||||| |||||| |||||||||||    
T  29840166 tgcgagagaaaa-gttggagtatttattgagggtaaagttgggagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 29840077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 39671081 - 39671179
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||||||| |||||| || || || | |||||||||||  | |||||||||||| |||| ||||| |||||||||||||||||||| || |||||||||    
T  39671081 aatgaaattatcattagacataacacatttactaaactacctttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagaaaa 39671179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 246
Target Start/End: Complemental strand, 38692512 - 38692469
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  38692512 aaaagacaaaattaaagttgcattgaaaattgtgcgagagaaaa 38692469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 54233954 - 54233900
Alignment:
Q  189 cttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga 243  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| || ||||||    
T  54233954 cttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 54233900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 331
Target Start/End: Original strand, 45903391 - 45903562
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa 247  Q
    ||||||||||||||||||||| ||||||||| |||||||  ||||||||||            |||||||||||||||||||||||    ||||| ||||    
T  45903391 aatgaaataatcattggatataacgcttttattaaactgctcttactttat-----------taaattaaagttgcattgaaaattggatgagag-aaaa 45903478  T
Q  248 gttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    ||   |||| || || | | | ||||||| ||| |||| |||||||||||||| |||| |||||| ||||||||||| ||||||    
T  45903479 gtcagagtactttttgaggtttaagttggtagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaataa 45903562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 331
Target Start/End: Complemental strand, 45049831 - 45049704
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||| ||||| |||||||||||||||||||| ||||| || |||||| | |||| ||||| |  |||||||| | ||| |||| ||||| || ||||  |    
T  45049831 aaaatacaaacttaaagttgcattgaaaattgtgcgaaag-aaaagtaggagtacttattgagagtaaagttcggagaaaaaaattaaaattatattaaa 45049733  T
Q  303 aatataaagtaacattcattttaaaataa 331  Q
    ||| |||||| ||||| ||||||||||||    
T  45049732 aatgtaaagtgacattaattttaaaataa 45049704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 32141057 - 32141112
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||  ||||||||||    
T  32141057 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtggcattcatttt 32141112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 50072338 - 50072283
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||| |||| |||||||||||||| |||| |||||| |||||||||||    
T  50072338 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 50072283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 126
Target Start/End: Original strand, 2728309 - 2728347
Alignment:
Q  88 tttaatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  2728309 tttaatactccatccgtttcaaaatgagtgtcgctttag 2728347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 38991673 - 38991743
Alignment:
Q  87 atttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||| ||||| | ||||||||||||||||||||| ||||| |  | ||||||||||||||||||| |||||    
T  38991673 attttatacttcctccgttttaaaatgagtgtcgttttagtcaattgcacacagattaagaaatgtaataa 38991743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 324
Target Start/End: Original strand, 43421207 - 43421265
Alignment:
Q  266 ggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||||||||||| |||| |||||||||||| |||||| |||||| || ||||||||    
T  43421207 ggtaaagttggaagaaaaaaattaaagttgtatgggaaatgtaaagtgaccttcatttt 43421265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 7905920 - 7905981
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg 151  Q
    ||||||||| ||||||||||||||||||||| ||||||  ||  |||||| |||||||||||    
T  7905920 taatactccctccgttttaaaatgagtgtcgttttaggtgtttacacacatattaagaaatg 7905981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 38510168 - 38510205
Alignment:
Q  89 ttaatactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||||||||||||||| |||||    
T  38510168 ttaatactccatccgttttaaaatgagtgtcgttttag 38510205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 53814412 - 53814477
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||||||||||||||||||||||||| ||||  |  | ||||||| |||||| ||||||||||    
T  53814412 atactccatccgttttaaaatgagtgtcgttttaaccaatcgcacacatattaaggaatgaaataa 53814477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 54042095 - 54042131
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||||||||||||||||| |||||    
T  54042095 taatactccatccgttttaaaatgagtgtcgttttag 54042131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 55126740 - 55126672
Alignment:
Q  89 ttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||||||||||||||||||||| ||||| ||||| |  | |||||  ||||||| ||||||||||    
T  55126740 ttaatactccatccgttttaaaatgaatgtcgttttagccaattgcacattgattaaggaatgaaataa 55126672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 56556347 - 56556403
Alignment:
Q  269 aaagttggaagagaaaac-ttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||| ||||  ||||||||||||||||||| |||||| |||||||||||    
T  56556347 aaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 56556403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 29519438 - 29519505
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||| ||||||||||||||||||||||| ||||| |  |  |||||| |||||| ||||||||||    
T  29519438 taatacttcatccgttttaaaatgagtgtcgttttagccaattacacacatattaaggaatgaaataa 29519505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 37624787 - 37624728
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg 151  Q
    ||||||||||||||||||||||||||||| ||||||  ||  ||| || |||||||||||    
T  37624787 atactccatccgttttaaaatgagtgtcgttttaggtgtttacactcatattaagaaatg 37624728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 51930657 - 51930602
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||| |||| ||||| ||||||||||||| |||||  |||||||||||    
T  51930657 aaagttggaagaaaaaaattaaaattgtattggaaatgtaaagcgacattcatttt 51930602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 125
Target Start/End: Complemental strand, 19282615 - 19282581
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgcttta 125  Q
    |||||||| ||||||||||||||||||||||||||    
T  19282615 aatactccttccgttttaaaatgagtgtcgcttta 19282581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 34124527 - 34124477
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat 150  Q
    ||||||| ||||||||||||||||||| |  | ||||||||||||||||||    
T  34124527 tccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaat 34124477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 47321385 - 47321331
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag 146  Q
    ||||||| ||||||||||||||||||||| ||||| |  | ||||||||||||||    
T  47321385 atactccctccgttttaaaatgagtgtcgttttagccaattgcacacagattaag 47321331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 6462254 - 6462189
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||||||||||| |||||||| |||| ||||| |  | ||||||||||||||||| | |||||    
T  6462254 atactccatccgtttcaaaatgagggtcgttttagccaattgcacacagattaagaaaagtaataa 6462189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 28116192 - 28116229
Alignment:
Q  89 ttaatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  28116192 ttaatactcaatccgtttcaaaatgagtgtcgctttag 28116229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 40345262 - 40345327
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||| ||||||||||||||| ||||||||||| |  | ||||||| |||||  ||||||||||    
T  40345262 atactccctccgttttaaaatgaatgtcgctttagccaattgcacacaaattaatgaatgaaataa 40345327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 45043792 - 45043759
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgcttta 125  Q
    ||||||||||||||||||||||||||||| ||||    
T  45043792 atactccatccgttttaaaatgagtgtcgtttta 45043759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 50203032 - 50203065
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||||||||||| |||||    
T  50203032 tactccatccgttttaaaatgagtgtcgttttag 50203065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 52957713 - 52957770
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||| ||||||||||||||||||| |  | |||||||||||||| |||| |||||    
T  52957713 tccgtttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatggaataa 52957770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 2493343 - 2493279
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||||||||| ||||||||||||| ||| | |  | ||||||| |||||| ||||||||||    
T  2493343 tactccatccgtttcaaaatgagtgtcgtttttgccaattgcacacatattaaggaatgaaataa 2493279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 21045214 - 21045158
Alignment:
Q  269 aaagttggaagagaaaac-ttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||| ||||  |||||||||||||| |||| |||||| |||||||||||    
T  21045214 aaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 21045158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 22220284 - 22220344
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg 151  Q
    |||||| ||||||||| ||||||||||||| ||||||  ||  |||||| |||||||||||    
T  22220284 aatacttcatccgtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatg 22220344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 119
Target Start/End: Original strand, 30022018 - 30022046
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtc 119  Q
    |||||||||||||||||||||||||||||    
T  30022018 aatactccatccgttttaaaatgagtgtc 30022046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 37654651 - 37654587
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||| ||||||| ||||||||||||| ||||| |  | ||||||| |||||| ||||||||||    
T  37654651 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaataa 37654587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 42672023 - 42672055
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgcttta 125  Q
    |||| ||||||||||||||||||||||||||||    
T  42672023 tacttcatccgttttaaaatgagtgtcgcttta 42672055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 45889802 - 45889738
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||| |||||||| ||||||||||||| ||||| |  | ||||||| |||||| ||||||||||    
T  45889802 tactctatccgtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaataa 45889738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 52915748 - 52915712
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||| || |||||||||||||||||||    
T  52915748 taatactccatccgattcaaaatgagtgtcgctttag 52915712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 126; Significance: 9e-65; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 100 - 324
Target Start/End: Complemental strand, 1776 - 1548
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttactaaactgtccttact 194  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||     |||||||| ||||||||| ||| |||||||||| || |||||||    
T  1776 tccgttttaaaatgagtgtcgctttaggctttagcacaaagattaagaaatataatgaaataattattggatataacgtttttactaaattgcccttact 1677  T
Q  195 ttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagtt 294  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| ||  |||||| | | |||||||||| || |||| ||||||||    
T  1676 ttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagag-aaaagttggagattttattgaggataaagttggatgacaaaaattaaagtt 1578  T
Q  295 gtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||||||||| |||||||||||    
T  1577 gtattggaaatataaagtgacattcatttt 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 1499 - 1531
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgcttta 125  Q
    |||||||||||||||||||||||||||||||||    
T  1499 tactccatccgttttaaaatgagtgtcgcttta 1531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 9e-65; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 104 - 328
Target Start/End: Original strand, 41905858 - 41906085
Alignment:
Q  104 ttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaa-----ataatcattggatatgacgcttttactaaactgtccttactttat 198  Q
    ||||||||  ||||| | ||||||||||| ||||||||||||||||||||     ||||||||||||||| ||||||||||||||||| |||||||||||    
T  41905858 ttttaaaactagtgttgttttaggctttgacacacagattaagaaatgaactgaaataatcattggatataacgcttttactaaactgcccttactttat 41905957  T
Q  199 aaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtat 298  Q
    ||| ||||||||||||||||||||||||||||||| ||  |||| |||||||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  41905958 aagaaaaagacaaaattaaagttgcattgaaaattgtgtaagag-aaaagttggagtatttatt-gaggtaaagttggaagagaaaacttaaagttgtat 41906055  T
Q  299 tggaaatataaagtaacattcattttaaaa 328  Q
    | ||||| |||||| ||||| |||||||||    
T  41906056 tagaaatgtaaagtgacatttattttaaaa 41906085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 92 - 321
Target Start/End: Original strand, 34002043 - 34002277
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaat-----aatcattggatatgacgcttttactaaactg 186  Q
    ||||||||||||||| ||||||||| || |||| ||||||| ||||||||||||||||||||||     ||||||||||||| || | ||| ||||||||    
T  34002043 atactccatccgtttcaaaatgagtctctctttcggctttgacacacagattaagaaatgaaatgaaataatcattggatataacacctttgctaaactg 34002142  T
Q  187 tcctt-actttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaa 285  Q
      ||| |||||||||| ||||||||||||||||||||||||||||||| || ||||| |||||||| |||||||||| | |||||||||||||||  |||    
T  34002143 cactttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagag-aaaagttggagtatttattgagggtaaagttggaagaataaa 34002241  T
Q  286 cttaaagttgtattggaaatataaagtaacattcat 321  Q
     ||||| ||||||||||||| |||||| ||||||||    
T  34002242 attaaacttgtattggaaatgtaaagtgacattcat 34002277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 91 - 328
Target Start/End: Original strand, 42259459 - 42259699
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaact 185  Q
    |||||||| ||||||| ||||||||||||||| ||| |  | |||||| ||||||     ||||||| ||||| ||| || || || ||||||||||| |    
T  42259459 aatactccttccgtttcaaaatgagtgtcgctctagccaattgcacacggattaaagaatgaaatgagataattattagacataacacttttactaaaat 42259558  T
Q  186 gtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaa 285  Q
    | |||||||||||||| |||||||||  ||||||||||||||||||||||| ||||  |||||||  |||||||||| | ||||||||||||||| ||||    
T  42259559 gcccttactttataagaaaaagacaagcttaaagttgcattgaaaattatgtgaga-caaaagtttgagtatttattgagggtaaagttggaaga-aaaa 42259656  T
Q  286 cttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
     |||||||||||||| |||  |||| |||||||||||||||||    
T  42259657 attaaagttgtattgaaaacgtaaaataacattcattttaaaa 42259699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 148 - 328
Target Start/End: Original strand, 3680895 - 3681074
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa 247  Q
    ||||||||||||||| || || |  ||||||||||||||  ||||||||||||| |||||||||| ||||||||||||| |||||| || ||||| ||||    
T  3680895 aatgaaataatcattagacataaaacttttactaaactgctcttactttataagaaaaagacaaatttaaagttgcatttaaaattctgtgagag-aaaa 3680993  T
Q  248 gttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||   ||||||||||| |||||||||||||||  ||| |||||||||||||| |||| |||||| |||||||||||||||    
T  3680994 gttagtgtatttattaatggtaaagttggaagaacaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaa 3681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 87 - 328
Target Start/End: Original strand, 36447517 - 36447753
Alignment:
Q  87 atttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttacta 181  Q
    |||||||||| | ||  ||||||||| ||||| | |||||||||||| | |||||||||||||||     ||||||| | ||||||| || |||||| ||    
T  36447517 atttaatacttcctcaattttaaaataagtgttgttttaggctttggtatacagattaagaaatggaatgaaataattactggatataactcttttatta 36447616  T
Q  182 aactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagag 281  Q
    ||||||| |||||||||||| |||||| ||||||||||||| ||||||||||||| ||||| |||||||| |         || |||||||||||||||     
T  36447617 aactgtctttactttataagaaaaagataaaattaaagttgaattgaaaattatgtgagag-aaaagttgga---------aagggtaaagttggaagaa 36447706  T
Q  282 aaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||| |||||||||||||| ||||||||||| | |||||||||||||    
T  36447707 aaaaattaaagttgtattgaaaatataaagtgatattcattttaaaa 36447753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 147 - 328
Target Start/End: Original strand, 28044112 - 28044283
Alignment:
Q  147 aaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||| || |||||||||    
T  28044112 aaatgaaataatcattggatataacgtttttactaaactgcccttactttataagaaaaagacaaaattaaagttgtattgaaaattgtgtgagagaaaa 28044211  T
Q  247 agttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    | ||| ||         | | ||||||||||||| |||| |||||||||||||| |||| |||||| |||||||||||||||    
T  28044212 a-ttggag---------aggataaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaa 28044283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 174 - 324
Target Start/End: Complemental strand, 1103639 - 1103490
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    ||||||||||||  |||||||||||||  |||| ||||| |||||||| ||||||||||| || ||||||||| ||||||||||||||| | ||||||||    
T  1103639 ttttactaaactacccttactttataaaaaaaaaacaaatttaaagttacattgaaaattgtgtgagagaaaa-gttgaagtatttattgagggtaaagt 1103541  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||| || | ||||||||||||||||||| |||| | |||||||||||    
T  1103540 tggaagaaaacaattaaagttgtattggaaatgtaaaatgacattcatttt 1103490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 146 - 324
Target Start/End: Complemental strand, 17869420 - 17869243
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaa 245  Q
    ||||||||||||||||| || || || |||||| |||| |||| |||||||||||| |||| ||||| |||||||||||||||||||| || ||||||||    
T  17869420 gaaatgaaataatcattagacataacacttttattaaattgtctttactttataagaaaaatacaaacttaaagttgcattgaaaattgtgtgagagaaa 17869321  T
Q  246 aagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |  ||| |||||||||| | | ||||||||||||  |||| ||||||||| ||||||||| |||| | |||||||||||    
T  17869320 agattg-agtatttattgaggataaagttggaaggaaaaaattaaagttgcattggaaatgtaaaatgacattcatttt 17869243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 18886826 - 18886728
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||    
T  18886826 aatgaaataatcattagatataacgcttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaattgtgtgaaagaaaa 18886728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 174 - 310
Target Start/End: Complemental strand, 26963636 - 26963499
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| |||||||| |||||| ||| | |||||||    
T  26963636 ttttactaaaataaccttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagagagaaaagttggagtattcattgagggtaaag 26963537  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaa 310  Q
    |||||||| |||| ||||||||| ||||||||| ||||    
T  26963536 ttggaagaaaaaaattaaagttgcattggaaatgtaaa 26963499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 85 - 324
Target Start/End: Original strand, 32345738 - 32345983
Alignment:
Q  85 ttatttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa-----tcattggatatgacgcttttac 179  Q
    |||| ||||||||| ||||||| ||||||||||||||||||| |  | ||||||||||||||||||  |||||     |||   |  || ||  ||||||    
T  32345738 ttatataatactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttac 32345837  T
Q  180 taaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaa 278  Q
    |||| |  |||||||||||||| |||| ||||| ||||||||| |||||||||| || |||||| |||||||| |||||||||| | |||||||||||||    
T  32345838 taaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaa 32345937  T
Q  279 gagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    || |||| ||||||||| |||| |||| |||||  |||||||||||    
T  32345938 gaaaaaaattaaagttgcattgaaaatgtaaagcgacattcatttt 32345983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 93 - 324
Target Start/End: Complemental strand, 5723227 - 5723009
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataatcattggatatgacgcttttactaaactgtcctta 192  Q
    |||||||||||||||||||||||||||| ||||| |  | ||||||| |||||| ||| ||||||||||| || || ||  ||||||||||||| ||       
T  5723227 tactccatccgttttaaaatgagtgtcgttttagtcaattgcacacaaattaaggaataaaataatcattagacatcac--ttttactaaactgccc--- 5723133  T
Q  193 ctttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaag 292  Q
          |||||||||||||| |||||||||||||||||||| || ||||| |||||||  |||||||||| | ||||||||| | ||| |||| ||||||    
T  5723132 ------aaggaaaagacaaacttaaagttgcattgaaaattgtgtgagag-aaaagtttgagtatttattgagggtaaagttaggaga-aaaaattaaag 5723041  T
Q  293 ttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| |||| |||||| |||||||||||    
T  5723040 ttgtattgaaaatgtaaagtgacattcatttt 5723009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 189 - 328
Target Start/End: Original strand, 31416763 - 31416903
Alignment:
Q  189 cttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
    |||| |||||||| | |||||||| |||||||||||||||||||| || |||||| |||| |||||||||||||| | ||||||||||||||| |||| |    
T  31416763 cttattttataagaacaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaaattgaagtatttattgagggtaaagttggaagaaaaaaat 31416862  T
Q  288 taaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||||||||| |||| |||||| | |||||||||||||    
T  31416863 taaagttgtattgaaaatgtaaagtgatattcattttaaaa 31416903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 146 - 331
Target Start/End: Original strand, 19920253 - 19920426
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaa 245  Q
    ||||||||||||||||| || ||||| ||||||||||| |||||         ||| |||||||||  |||||||||||||||||||| |||||||||||    
T  19920253 gaaatgaaataatcattagacatgacacttttactaaagtgtcc---------aagaaaaagacaa--ttaaagttgcattgaaaattgtgcgagagaaa 19920341  T
Q  246 aagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |  |||| ||||||||| | ||||||||||  ||| |||| ||||||||||||||||||| |||||| ||||||||||||||||||    
T  19920342 agtttga-gtatttattgagggtaaagttgagagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaataa 19920426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 93 - 324
Target Start/End: Complemental strand, 40299079 - 40298853
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||| ||||||||||||| ||||| |  | ||||||| ||||||     |||||||||||| |||||| || || ||||||||||||||     
T  40299079 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacaaattaaggaatgaaatgaaataataattggacataacacttttactaaactgc 40298980  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
    ||         ||| |||||||||| |||||||| ||||||||||| || ||||||||| |||| |||||||||| | ||||||||||| ||| |||| |    
T  40298979 cc---------aagaaaaagacaaacttaaagttacattgaaaattgtgtgagagaaaa-gttggagtatttattgagggtaaagttgggagaaaaaaat 40298890  T
Q  288 taaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||||||||| |||| |||||| |||||||||||    
T  40298889 taaagttgtattgaaaatgtaaagtgacattcatttt 40298853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 10684827 - 10684978
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| |||||||||| ||||||||| |||||||||| || |||||| |||||||  | |||||||||| |||||||    
T  10684827 ttttactaaaataaccttactttataagaaaaagacaaacttaaagttgaattgaaaattgtgtgagagagaaaagttttaatatttattaagggtaaag 10684926  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| |||| ||||||||| |||| |||| ||||| | ||||||||||    
T  10684927 ttggaagaaaaaaattaaagttgcattgaaaatgtaaagcagcattcatttt 10684978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 174 - 324
Target Start/End: Complemental strand, 19906569 - 19906420
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    |||||||||| |  |||||||||||| | | |||||||| |||||||||||||||||||| || ||||||||| |||| | |||||||| | ||||||||    
T  19906569 ttttactaaaataaccttactttataggaacaagacaaacttaaagttgcattgaaaattgtgagagagaaaa-gttggaatatttattgagggtaaagt 19906471  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||| |||| | ||||||||||||||||| |||||  |||||||||||    
T  19906470 tggaagaaaaaaataaaagttgtattggaaatgtaaagcgacattcatttt 19906420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 88 - 331
Target Start/End: Original strand, 26527307 - 26527551
Alignment:
Q  88 tttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaat-----aatcattggatatgacgcttttactaa 182  Q
    ||||||||||||||||||||| ||||| | ||| || ||| |||   ||| ||||||||||||| |||     ||||||| || || || | ||||||||    
T  26527307 tttaatactccatccgttttacaatgaatatcgtttaaggtttta--acatagattaagaaatggaatgcaataatcattagacataacacctttactaa 26527404  T
Q  183 actgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagaga 282  Q
    ||||   |||||||||||| |||| | ||| ||||||||||||||||||||||   | || |||||||| |||||||||| | | ||||||| ||||| |    
T  26527405 actgcttttactttataagaaaaaaa-aaatttaaagttgcattgaaaattatttaacag-aaaagttggagtatttattgaggttaaagttagaagaaa 26527502  T
Q  283 aaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    ||| |||||||||||||| |||| |||| ||||||||||||||||||||    
T  26527503 aaaattaaagttgtattgaaaatgtaaaataacattcattttaaaataa 26527551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 188 - 324
Target Start/End: Complemental strand, 30515116 - 30514979
Alignment:
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa-gttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
    ||||||||| |||| | |||||||| ||||||||| ||| |||||| |  |||||||||| |||| |||||||||| ||||||||||||||||| ||||     
T  30515116 ccttactttttaagaataagacaaatttaaagttgtatttaaaattgtctgagagaaaaaagttggagtatttattgaaggtaaagttggaagaaaaaaa 30515017  T
Q  287 ttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||||||||||||||| |||| | |||||||||||    
T  30515016 ttaaagttgtattggaaatgtaaattgacattcatttt 30514979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 34733492 - 34733356
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaa 245  Q
    ||||||||||||||||| || || || |||||||||||||  |||||||||||||| |||||||||| |||||||||||||||||||  || ||||||||    
T  34733492 gaaatgaaataatcattagacataacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaat--tgtgagagaaa 34733395  T
Q  246 aagttgaagtatttattaaaggtaaagttggaagagaaaa 285  Q
    || ||| |||||||||| |||| | |||||||||| ||||    
T  34733394 aa-ttggagtatttattgaagggagagttggaagaaaaaa 34733356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 148 - 331
Target Start/End: Original strand, 30833067 - 30833248
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa 247  Q
    ||||||||||| ||| ||||| || ||||||||||| |||| ||  |||||| | |||||||||| ||| |||| || |||||||| || |||| |||||    
T  30833067 aatgaaataattattagatataacacttttactaaattgtc-ttgttttatatgaaaaagacaaacttagagttacactgaaaattgtgtgaga-aaaaa 30833164  T
Q  248 gttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |||| |||||||||| |||||||||||| |||| |||| | |||||||||||| |||| |||| | | ||||||||||||||||    
T  30833165 gttggagtatttattgaaggtaaagttgaaagaaaaaaataaaagttgtattgaaaatgtaaaatgatattcattttaaaataa 30833248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 42044016 - 42044134
Alignment:
Q  214 ttaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagt 312  Q
    |||||||||||||||||||| || |||||| |||||||| |||||||||| | ||||||||||||||| |||| |||||||||||||| |||| ||||||    
T  42044016 ttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagt 42044115  T
Q  313 aacattcattttaaaataa 331  Q
     ||||| ||||| ||||||    
T  42044116 gacattaattttgaaataa 42044134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 324
Target Start/End: Original strand, 36447083 - 36447218
Alignment:
Q  190 ttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaactt 288  Q
    |||||||||||| | |||||||  |||||||||||||||||||| || |||||| |||||||| |||||||| | | | |||||||||||||||||| ||    
T  36447083 ttactttataagaataagacaagcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttaatgaggataaagttggaagagaaaaatt 36447182  T
Q  289 aaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||| |||||||| |||| |||| | |||||||||||    
T  36447183 aaaattgtattgaaaatgtaaaatgacattcatttt 36447218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 39117486 - 39117636
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    |||||||||| |  |||||||||||||| | |||||||| |||||||||||||||||||| || |||||| ||| ||| |||||| ||| | ||||| ||    
T  39117486 ttttactaaaataaccttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaattggagtattcattgagggtaatgt 39117585  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||| || | |||||||||||||| |||| ||||   |||||||||||    
T  39117586 tggaagaaaataattaaagttgtattgaaaatgtaaaacgacattcatttt 39117636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 324
Target Start/End: Complemental strand, 42121768 - 42121556
Alignment:
Q  108 aaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaat-----aatcattggatatgacgcttttactaaactgtccttactttataagg 202  Q
    ||||||||||||||||||| |  | |||||||||||||| ||||||||     ||||||| || ||  | |||||||||||||| ||||||||||| ||     
T  42121768 aaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaatcaaataatcattagacatatcacttttactaaactgaccttactttattaga 42121669  T
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaag-agaaaacttaaagttgtattgg 301  Q
    |||||| | | |||||||||||||||||||| |  ||||| |||||||| ||         |  ||||||||||||| | |||| |||||||||||||||    
T  42121668 aaaagatacacttaaagttgcattgaaaattgtttgagag-aaaagttggag---------agagtaaagttggaagaaaaaaaattaaagttgtattgg 42121579  T
Q  302 aaatataaagtaacattcatttt 324  Q
    ||||||||||| |||||||||||    
T  42121578 aaatataaagtgacattcatttt 42121556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 205 - 324
Target Start/End: Complemental strand, 36836184 - 36836065
Alignment:
Q  205 aagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaa 303  Q
    |||||||| ||||||||||||||||||||||| |||||| |||| ||| ||| |||| | | ||||||||||||||| |||| |||||||||||||| ||    
T  36836184 aagacaaatttaaagttgcattgaaaattatgtgagagagaaaaattggagtgtttactga-ggtaaagttggaagaaaaaaattaaagttgtattgaaa 36836086  T
Q  304 atataaagtaacattcatttt 324  Q
    || |||||  |||||||||||    
T  36836085 atgtaaagcgacattcatttt 36836065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 146 - 324
Target Start/End: Complemental strand, 32275378 - 32275210
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaa 245  Q
    |||||||||||||||||  | |||||| ||||||||||||| | |||||||||||| ||||  |||| |||||||||||||||||||| || || || ||    
T  32275378 gaaatgaaataatcattaaacatgacgtttttactaaactgcctttactttataagaaaaaatcaaacttaaagttgcattgaaaattgtgtga-aggaa 32275280  T
Q  246 aagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||  ||         | ||||||||||||||| |||| ||||||||||||| ||||| ||||||  ||||||||||    
T  32275279 aagtttgag---------agggtaaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtggcattcatttt 32275210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 33056201 - 33056355
Alignment:
Q  98 catccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactgtcctta 192  Q
    ||||||||| ||||||||||||| ||||| |  | ||||| |||||||     |||||||||||||||||  | || || |||||||||||||| |||||    
T  33056201 catccgtttcaaaatgagtgtcgttttagtcaattgcacatagattaaggaatgaaatgaaataatcattaaacataacacttttactaaactgccctta 33056300  T
Q  193 cttta-taaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||| |||| |||||||||| |||||  ||||||||||||| || |||||||||    
T  33056301 ctttattaagaaaaagacaaatttaaaactgcattgaaaattgtgtgagagaaaa 33056355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 93 - 310
Target Start/End: Original strand, 33845337 - 33845544
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataatcattggatatgacgcttttactaaactgtcctta 192  Q
    |||||| ||||||||||||||||||||| ||||| |  |  ||| || |||||| |||||||||||||||  || | || |||||||||||||| ||       
T  33845337 tactccctccgttttaaaatgagtgtcg-tttagccaattacacgcaaattaagtaatgaaataatcattacatgtaacacttttactaaactgccc--- 33845432  T
Q  193 ctttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaa-acttaaa 291  Q
          ||| |||||||||| |||||||||||||||||||| ||||||| ||||||||| |||| ||||| | ||||||||||| ||| ||| | |||||    
T  33845433 ------aagaaaaagacaaacttaaagttgcattgaaaattgtgcgaga-aaaaagttggagtaattattgagggtaaagttgggagaaaaataattaaa 33845525  T
Q  292 gttgtattggaaatataaa 310  Q
    ||| ||||| |||| ||||    
T  33845526 gttctattgaaaatgtaaa 33845544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 266 - 328
Target Start/End: Original strand, 43813434 - 43813496
Alignment:
Q  266 ggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||    
T  43813434 ggtaaagttggaagaaaaaaattaaagttgtattggaaatataaagtgacattcattttaaaa 43813496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 93 - 328
Target Start/End: Complemental strand, 6522060 - 6521820
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa-----tcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||||||||||||||||||||||| |  | ||||||| |||||| ||||||||||     |||   |  || ||  || ||||||| |      
T  6522060 tactccctccgttttaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcataacaattatactaaaataa 6521961  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga--aaaagttgaagtatttattaaaggtaaagttggaagagaaaa 285  Q
    |||||||||||||| |||||||||| ||||| ||| |||||||||| || ||||||   ||| ||| |||||||||| |||||||||||| |||| ||||    
T  6521960 ccttactttataagaaaaagacaaacttaaaattgtattgaaaattgtgtgagagagggaaatttg-agtatttattgaaggtaaagttgaaagaaaaaa 6521862  T
Q  286 cttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
     ||||| ||| |||| |||| |||||  | |||||||||||||    
T  6521861 tttaaa-ttgcattgaaaatgtaaagcgatattcattttaaaa 6521820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 146 - 324
Target Start/End: Original strand, 22627324 - 22627494
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaa 245  Q
    |||||||||||||| ||  | || || | |||||||||||| | |||||||||||  | |||||||| |||||||||||||||||||| || ||||| ||    
T  22627324 gaaatgaaataatcgttaaacataacacatttactaaactgcctttactttataaaaataagacaaacttaaagttgcattgaaaattgtgtgagag-aa 22627422  T
Q  246 aagttgaagtatttattaaaggtaaagttggaag--agaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||| ||         | ||||||||||||||  | |||| ||||||||||||||||||| |||||| |||||||||||    
T  22627423 aagttggag---------agggtaaagttggaagaaaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 22627494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 324
Target Start/End: Complemental strand, 18733581 - 18733459
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaac--ttaaagttgtattg 300  Q
    |||||||||| ||||||||||||||||| || || |||| ||||| ||| |||||||||| | |||| |||| ||||| ||||   ||||||||||||||    
T  18733581 aaaagacaaatttaaagttgcattgaaagttgtgtgagaaaaaaa-ttggagtatttattgagggtagagttcgaagaaaaaaaaattaaagttgtattg 18733483  T
Q  301 gaaatataaagtaacattcatttt 324  Q
     |||| |||||| |||||||||||    
T  18733482 aaaatgtaaagtgacattcatttt 18733459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 19288415 - 19288502
Alignment:
Q  244 aaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |||||||| || ||||||| | ||||||||| ||||| |||| ||||||||||||| ||||| |||||| ||||||||||| ||||||    
T  19288415 aaaagttggagaatttattgagggtaaagttagaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcattttgaaataa 19288502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 268
Target Start/End: Complemental strand, 47272306 - 47272213
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggt 268  Q
    ||||||||||||| ||||  |||||| | ||||||||||  |||| |||||||||||||| || ||| ||||||||||||||||||||| |||||    
T  47272306 ttttactaaactgcccttgttttatatgaaaaagacaaacataaaattgcattgaaaattgtgtgag-gaaaaagttgaagtatttattgaaggt 47272213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 233
Target Start/End: Original strand, 40207299 - 40207447
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-gaa---ataatcattggatatg----acgcttttactaaac 184  Q
    |||||||||||||| ||||||||||| ||||||| |  | ||||||| ||||||  || |||   ||||||||| |||||     || ||||||||||||    
T  40207299 tactccatccgtttcaaaatgagtgttgctttagccaattgcacacatattaaggtattgaatgaataatcattagatatatataacacttttactaaac 40207398  T
Q  185 tgtccttactttataaggaaaagacaaaattaaagttgcattgaaaatt 233  Q
    || |||||||||||||| ||| |||||| ||||| ||||||||||||||    
T  40207399 tgcccttactttataagaaaatgacaaacttaaaattgcattgaaaatt 40207447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 42010573 - 42010645
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||||||||| ||||| |||||||| |||||||||| |||||||| ||||||||||| |  |||||||||    
T  42010573 ttttactaaactgcccttattttataagaaaaagacaaacttaaagttacattgaaaattgtatgagagaaaa 42010645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 45933495 - 45933552
Alignment:
Q  89 ttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag 146  Q
    |||||||||| ||||||||||||||||||||||||||| |  | ||||||||||||||    
T  45933495 ttaatactccctccgttttaaaatgagtgtcgctttagccacttgcacacagattaag 45933552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 48838651 - 48838755
Alignment:
Q  147 aaatgaaataatcattggatatgacgcttttactaaactgtccttactttataagga-----aaagacaaaattaaagttgcattgaaaattatgcgaga 241  Q
    |||||||||||||||| || || ||  || |||||||||| |||||||||||||  |     ||||||||| |||||||||||||||||||| || ||||    
T  48838651 aaatgaaataatcattagacataacatttatactaaactgaccttactttataaaaataaaaaaagacaaatttaaagttgcattgaaaattgtgtgaga 48838750  T
Q  242 gaaaa 246  Q
    |||||    
T  48838751 gaaaa 48838755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 18886730 - 18886671
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||||||| |||| |||||||||||||| |||| |||||| | |||||||||||||    
T  18886730 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgagattcattttaaaa 18886671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 32873269 - 32873315
Alignment:
Q  282 aaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||||    
T  32873269 aaaaattaaaattgtattggaaatataaagtgacattcattttaaaa 32873315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 18733408 - 18733441
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||||||||||||||||||||    
T  18733408 tactccatccgttttaaaatgagtgtcgctttag 18733441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 7795153 - 7795217
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||||||||| ||||||||||||||||||| |  | | ||||| |||||| ||||||||||    
T  7795153 tactccatccgtttcaaaatgagtgtcgctttagccaattgtacacaaattaaggaatgaaataa 7795217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 324
Target Start/End: Complemental strand, 22597292 - 22597236
Alignment:
Q  268 taaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| |||| |||| |||||||||||||| |||| |||||| |||||||||||    
T  22597292 taaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 22597236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 48684964 - 48684900
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||| || |||||||||||||||||||||||  |  | |||||||||||||| ||||||||||    
T  48684964 tactccctcagttttaaaatgagtgtcgctttaatcaattgcacacagattaaggaatgaaataa 48684900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 30833292 - 30833258
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||| |||||||||||||||||||||||||||    
T  30833292 atactccttccgttttaaaatgagtgtcgctttag 30833258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 40339699 - 40339641
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg 151  Q
    ||||||||||||||||||||  |||||| ||||| |  | |||||||||||||||||||    
T  40339699 tactccatccgttttaaaatatgtgtcgttttagccaattgcacacagattaagaaatg 40339641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 126
Target Start/End: Complemental strand, 44453379 - 44453341
Alignment:
Q  88 tttaatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  44453379 tttaatactccttccgttttaaaatgagtgtcgttttag 44453341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 330
Target Start/End: Complemental strand, 47271799 - 47271725
Alignment:
Q  257 tttattaaaggtaaagttggaagagaaaact-taaagttgtattggaaatataaagtaacattcattttaaaata 330  Q
    |||||| || |||||||||||||| ||||   |||||||||||||||||| || |||  ||||||||||||||||    
T  47271799 tttattgaaagtaaagttggaagaaaaaaaactaaagttgtattggaaatctagagtgtcattcattttaaaata 47271725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 1742233 - 1742168
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||| ||||||| ||||||||||||||||||| |  | ||||||| |||||| |||| |||||    
T  1742233 atactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataa 1742168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 16564720 - 16564777
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||||||||||||||||||||||  |  | ||| |||||||||| ||||||||||    
T  16564720 tccgttttaaaatgagtgtcgctttaaccaattgcatacagattaaggaatgaaataa 16564777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 16600942 - 16600885
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||||||||||||||||||||||  |  | ||| |||||||||| ||||||||||    
T  16600942 tccgttttaaaatgagtgtcgctttaaccaattgcatacagattaaggaatgaaataa 16600885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 19277057 - 19277102
Alignment:
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaatt 233  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||    
T  19277057 ccttactttatatgaacaagacaaacttaaagttgcattgaaaatt 19277102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 22297952 - 22297985
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||||||||||| |||||    
T  22297952 tactccatccgttttaaaatgagtgtcgttttag 22297985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 23155372 - 23155405
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||||||| |||||||||    
T  23155372 tactccatccgttttaaaatgagtatcgctttag 23155405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 23935376 - 23935409
Alignment:
Q  94 actccatccgttttaaaatgagtgtcgctttagg 127  Q
    ||||||||||||||||||||||||||| ||||||    
T  23935376 actccatccgttttaaaatgagtgtcgttttagg 23935409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 23935663 - 23935630
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgcttta 125  Q
    ||||||| ||||||||||||||||||||||||||    
T  23935663 atactccctccgttttaaaatgagtgtcgcttta 23935630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 27936008 - 27935975
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||| |||||||||||||||||||    
T  27936008 tactccatccgtttcaaaatgagtgtcgctttag 27935975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 29530844 - 29530909
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||| | ||||||||||||||||||| ||||| |  | |||||||||||||| ||| ||||||    
T  29530844 atactcccttcgttttaaaatgagtgtcgatttagccaattgcacacagattaaggaataaaataa 29530909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 31930057 - 31930024
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||| |||||||||||||    
T  31930057 tactccatccgttttaaaataagtgtcgctttag 31930024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 40805072 - 40805023
Alignment:
Q  282 aaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |||| |||||||||||||| |||| |||||| ||||| ||||||||||||    
T  40805072 aaaaattaaagttgtattgtaaatgtaaagtgacatttattttaaaataa 40805023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 13405037 - 13405101
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||| || |||||||||||||||||| ||||  |  | ||||||| |||||||||||||||||    
T  13405037 tactccttctgttttaaaatgagtgtcgttttaaccaattgcacacatattaagaaatgaaataa 13405101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 18270810 - 18270750
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg 151  Q
    |||||| ||||||||| ||||||||||||| ||||||  ||  |||||| |||||||||||    
T  18270810 aatacttcatccgtttcaaaatgagtgtcgttttaggtgtttacacacatattaagaaatg 18270750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 19906658 - 19906622
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  19906658 taatactccctccgtttcaaaatgagtgtcgctttag 19906622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 36446978 - 36447014
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||| |||||||||||||||| |||||||    
T  36446978 taatactccatctgttttaaaatgagtgttgctttag 36447014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 324
Target Start/End: Original strand, 40207469 - 40207525
Alignment:
Q  268 taaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| |||| |||| |||||||||||||  ||||||||| | |||||||||||    
T  40207469 taaagttgaaagaaaaaaattaaagttgtattaaaaatataaaatgacattcatttt 40207525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 44567241 - 44567205
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  44567241 taatactccctccgttttaaaatgggtgtcgctttag 44567205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 45948537 - 45948573
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  45948537 taataatccatccgttttaaaatgagtgtcgttttag 45948573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 9e-65; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 100 - 324
Target Start/End: Original strand, 26669017 - 26669245
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttactaaactgtccttact 194  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||     |||||||| ||||||||| ||| |||||||||| || |||||||    
T  26669017 tccgttttaaaatgagtgtcgctttaggctttagcacaaagattaagaaatataatgaaataattattggatataacgtttttactaaattgcccttact 26669116  T
Q  195 ttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagtt 294  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| ||  |||||| | | |||||||||| || |||| ||||||||    
T  26669117 ttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagag-aaaagttggagattttattgaggataaagttggatgacaaaaattaaagtt 26669215  T
Q  295 gtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||||||||| |||||||||||    
T  26669216 gtattggaaatataaagtgacattcatttt 26669245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 101 - 324
Target Start/End: Complemental strand, 32258945 - 32258727
Alignment:
Q  101 ccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaa-----tgaaataatcattggatatgacgcttttactaaactgtccttactt 195  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||     ||||||||||||||||||| ||||||||||||||||| |||| |||    
T  32258945 ccgttttaaaatgagtgtcgctttaggctttgacacacagattaagaaatcgattgaaataatcattggatataacgcttttactaaactgcccttgctt 32258846  T
Q  196 tataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaagg-taaagttggaagagaaaacttaaagtt 294  Q
    |||           |||||||||||||||||||||||| || |||||||||||||| ||||||| ||  ||| ||||||||||||| |||| ||||||||    
T  32258845 tat-----------aaaattaaagttgcattgaaaattgtgtgagagaaaaagttggagtattttttttaggttaaagttggaagaaaaaaattaaagtt 32258757  T
Q  295 gtattggaaatataaagtaacattcatttt 324  Q
    |||||| |||| |||||| |||||||||||    
T  32258756 gtattgaaaatgtaaagtgacattcatttt 32258727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 146 - 324
Target Start/End: Original strand, 12828651 - 12828828
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaa 245  Q
    ||||||||||||||||| || || || |||||||||||||| |||||||||||||| |||||||||  |||||||||||||||||||| || ||||| ||    
T  12828651 gaaatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaagcttaaagttgcattgaaaattgtgtgagag-aa 12828749  T
Q  246 aagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||||||||||||| | ||||||||||||||| |||| ||||||||||||||||||| |||||| | |||||||||    
T  12828750 aagttgaagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgaaattcatttt 12828828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 92 - 324
Target Start/End: Complemental strand, 29915784 - 29915546
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttactaaactg 186  Q
    ||||||| ||||||| ||||||| ||| | ||||||  |||||||||| ||||||||||     |||||||| ||| || || || ||||||||||||||    
T  29915784 atactccctccgtttcaaaatgaatgttgttttaggtgttggcacacatattaagaaattgaatgaaataataattagaaataacacttttactaaactg 29915685  T
Q  187 tcctt-actttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaag-agaaa 284  Q
     | || |||||||||| ||||||||||  ||||||||||||| ||||| || ||||| |||||||| |||||||||| | |||||||||||||| | |||    
T  29915684 ccatttactttataagaaaaagacaaacataaagttgcattggaaattgtgtgagag-aaaagttggagtatttattgagggtaaagttggaagaaaaaa 29915586  T
Q  285 acttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    | ||||||||||||||||||| |||||| |||||||||||    
T  29915585 aattaaagttgtattggaaatgtaaagtgacattcatttt 29915546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 91 - 324
Target Start/End: Complemental strand, 29927450 - 29927212
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaaga-----aatgaaataatcattggatatgacgcttttactaaact 185  Q
    |||||||| ||||||| | ||||| ||||| || ||  |||| |||||||||||| |     ||||||||||||||| || || || ||||||||||  |    
T  29927450 aatactccctccgtttcacaatgaatgtcgtttaagattttgacacacagattaaaaaatagaatgaaataatcattagacataacacttttactaacat 29927351  T
Q  186 gtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaag-agaaa 284  Q
     ||||||||||||||| |||||||||| |||||||||||||||||| ||   ||||| |||||||| |||||||||| | |||||||||||||| | |||    
T  29927350 atccttactttataagaaaaagacaaacttaaagttgcattgaaaactacatgagag-aaaagttggagtatttattgagggtaaagttggaagaaaaaa 29927252  T
Q  285 acttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    | ||||||||||||||||||| |||||| |||||||||||    
T  29927251 aattaaagttgtattggaaatgtaaagtgacattcatttt 29927212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 92 - 324
Target Start/End: Original strand, 23936494 - 23936729
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaaactg 186  Q
    ||||||| ||||||||||||||||||||| ||||||  |||| ||||| |||||||||||     ||||||||||| ||||| ||  ||||||| || ||    
T  23936494 atactccctccgttttaaaatgagtgtcgttttaggtgttgggacacatattaagaaatggaatgaaataatcattagatataacatttttactgaattg 23936593  T
Q  187 tcctt-actttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaa 285  Q
     |||| |||||||||| |||| ||||| |||||||||||||||||||| || ||||   || |||| ||||| |||| | ||||||||||||||| ||||    
T  23936594 ccctttactttataagaaaaaaacaaatttaaagttgcattgaaaattgtgagaga---aaggttggagtatatattgagggtaaagttggaagaaaaaa 23936690  T
Q  286 cttaaagttgtattggaaatataaagtaacattcatttt 324  Q
     | ||||||| |||| |||| ||||||||||||||||||    
T  23936691 atgaaagttgcattgaaaatgtaaagtaacattcatttt 23936729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 144 - 324
Target Start/End: Original strand, 31275609 - 31275789
Alignment:
Q  144 aagaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga 243  Q
    |||||||||||||| |||| ||  | || ||||||| |||||| ||||  |||||| | |||||||||| |||||||||||||||||||| || |||| |    
T  31275609 aagaaatgaaataaccattagacgtaacacttttaccaaactgcccttgttttatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgaga-a 31275707  T
Q  244 aaaagttgaagtatttattaaaggtaaagttggaag-agaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| |||||||||| | |||||||||||||| | |||| ||||||||||||||||||| |||||| |||||||||||    
T  31275708 aaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 31275789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 100 - 246
Target Start/End: Original strand, 1924594 - 1924744
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttactaaactgtccttact 194  Q
    ||||||| ||||| |||||||||||||| ||||||| ||| ||||||||||     |||||||||||||||||| ||| ||||||||||||   ||||||    
T  1924594 tccgtttcaaaat-agtgtcgctttaggatttggcatacaaattaagaaatataatgaaataatcattggatataacgtttttactaaacttctcttact 1924692  T
Q  195 ttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||||||||||| |||||||||||||||||||||||||| || |||||||||    
T  1924693 ttataaggaaaatacaaaattaaagttgcattgaaaattgtgtgagagaaaa 1924744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 174 - 328
Target Start/End: Original strand, 17345132 - 17345287
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| | |||||||| || ||||||||||||||||| || |||||| |||||||| |||||||||| | |||||||    
T  17345132 ttttactaaaataaccttactttataagaacaagacaaacttcaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaag 17345231  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||| |||  ||||||||||||| ||||| |||||| | |||||||||||||    
T  17345232 ttggaagaaaaatattaaagttgtattagaaatgtaaagtgatattcattttaaaa 17345287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 190 - 328
Target Start/End: Complemental strand, 34576684 - 34576545
Alignment:
Q  190 ttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaactt 288  Q
    |||||||| ||| | |||||||| |||||||||||||||||||| || |||||| ||||||||||||||||||| | | ||||||||||||| |||| ||    
T  34576684 ttactttacaagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaggataaagttggaagaaaaaaatt 34576585  T
Q  289 aaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||||||||||||| |||| | | |||||||||||||    
T  34576584 aaagttgtattggaaatgtaaaatgatattcattttaaaa 34576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 92 - 324
Target Start/End: Original strand, 34439319 - 34439560
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaat-----aatcattggatatgacgcttttactaaactg 186  Q
    ||||||| ||||||||||||||||||||| ||||||  ||| |||| | |||||||||||||||     ||||||| ||||| ||  ||||| |||| ||    
T  34439319 atactccttccgttttaaaatgagtgtcgttttaggtgttgacacataaattaagaaatgaaatgaaataatcattagatataacatttttattaaattg 34439418  T
Q  187 tcctt-actttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga----aaaagttgaagtatttattaaaggtaaagttggaagag 281  Q
     |||| | |||||||| ||||||||||  ||||||||||||| ||||| ||  |||||    |||||||| ||||| |||| |||||||||||||||||     
T  34439419 ccctttattttataagaaaaagacaaacataaagttgcattggaaattgtgtaagagaaaagaaaagttggagtatatattgaaggtaaagttggaaga- 34439517  T
Q  282 aaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    || | | ||||||||||||||||| |||| | |||||||||||    
T  34439518 aagaatgaaagttgtattggaaatgtaaaatgacattcatttt 34439560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 4123854 - 4124002
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    ||||| |||||| |||||| ||||||||||||| ||||| ||||| |||||||||||||| || || |||||| |||| |||||||||| | ||||||||    
T  4123854 ttttattaaactatccttattttataaggaaaaaacaaacttaaa-ttgcattgaaaattgtgtgaaagaaaa-gttggagtatttattgagggtaaagt 4123951  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    || |||| |||| |||||||||||||  |||| |||||| |||||||||||    
T  4123952 tgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcatttt 4124002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 324
Target Start/End: Complemental strand, 30627325 - 30627096
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaac 184  Q
    ||||||| | ||||||||||||||||||||| |||||    | ||||||| |||||     ||||||||||||||||| ||||| || |||||||||||     
T  30627325 taatacttcctccgttttaaaatgagtgtcgttttagataattgcacacaaattaatgaatgaaatgaaataatcattagatataacacttttactaaag 30627226  T
Q  185 tgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaa 284  Q
    |||||         ||| |||| ||||| |||||||||||||||||||| |  |||||||||  |||| ||||||||| | ||||||||||  ||| |||    
T  30627225 tgtcc---------aagaaaaaaacaaatttaaagttgcattgaaaattgtttgagagaaaagtttga-gtatttattgagggtaaagttgagagaaaaa 30627136  T
Q  285 acttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    | |||||||||||||| ||||||||||| ||||| |||||    
T  30627135 aattaaagttgtattgaaaatataaagtgacatttatttt 30627096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 204 - 328
Target Start/End: Complemental strand, 8052468 - 8052346
Alignment:
Q  204 aaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaa 303  Q
    |||||||||  ||||||||||||||||||| || ||||||| | |||| |||||||||| | |||||| |||| ||| |||| ||||||||||||| |||    
T  8052468 aaagacaaacctaaagttgcattgaaaattgtgggagagaata-gttggagtatttattgagggtaaaattgggagaaaaaa-ttaaagttgtattagaa 8052371  T
Q  304 atataaagtaacattcattttaaaa 328  Q
    ||||||||| |||||||||||||||    
T  8052370 atataaagtgacattcattttaaaa 8052346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 6140715 - 6140601
Alignment:
Q  214 ttaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagt 312  Q
    ||||| |||||||||||||| ||  ||||| ||||||| ||||||||||| ||||||||||||||||| |||| ||||||||| ||||||||| |||||     
T  6140715 ttaaaattgcattgaaaattgtgtaagagagaaaagtttaagtatttattgaaggtaaagttggaaga-aaaaattaaagttgaattggaaatgtaaagc 6140617  T
Q  313 aacattcattttaaaa 328  Q
     |||||||||||||||    
T  6140616 gacattcattttaaaa 6140601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 214 - 328
Target Start/End: Complemental strand, 6143200 - 6143085
Alignment:
Q  214 ttaaagttgcattgaaaattatgcgagagaaaaa-gttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagt 312  Q
    ||||| ||||||| |||||| ||  ||||||||| ||| ||||||||||| ||||||||||||||||| |||| ||||||||| ||||||||| |||| |    
T  6143200 ttaaaattgcattaaaaattgtgtaagagaaaaaagtttaagtatttattgaaggtaaagttggaagaaaaaaattaaagttgaattggaaatgtaaaat 6143101  T
Q  313 aacattcattttaaaa 328  Q
     |||||||||||||||    
T  6143100 gacattcattttaaaa 6143085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 328
Target Start/End: Original strand, 10494760 - 10494913
Alignment:
Q  175 tttactaaactgtccttactttataaggaaaa-gacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    |||||||||||  |||||||||||||| |||| |||||| || ||||||||||||||||| |  ||||||||| |||| | ||||||||   || |||||    
T  10494760 tttactaaactacccttactttataagaaaaaagacaaactttaagttgcattgaaaattgtatgagagaaaa-gttggactatttattttgggcaaagt 10494858  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    || |||| |||| ||||||||| ||||||||| |||| | |||||||||||||||    
T  10494859 tgaaagaaaaaaattaaagttgaattggaaatgtaaactgacattcattttaaaa 10494913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 324
Target Start/End: Complemental strand, 26189651 - 26189513
Alignment:
Q  188 ccttactttataaggaaaaga-caaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaa 285  Q
    |||||||||||||| |||| | |||| |||||||||||||||||||| || | |||| |||| ||| |||||||||| | ||||||||||||||| |||     
T  26189651 ccttactttataagaaaaaaaacaaacttaaagttgcattgaaaattgtgtgtgagagaaaaattggagtatttattgagggtaaagttggaagaaaaat 26189552  T
Q  286 cttaaagttgtattggaaatataaagtaacattcatttt 324  Q
     ||||||||| ||||||||| ||||  ||||||||||||    
T  26189551 attaaagttgcattggaaatgtaaaacaacattcatttt 26189513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 317
Target Start/End: Original strand, 11785099 - 11785242
Alignment:
Q  173 cttttactaaactgtccttactttataaggaaaa-gacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaa 271  Q
    |||||| ||||||||| ||| |||||||  |||| || ||| ||||||||| |||||||||| || |||||||||  | ||| |||||||| | ||||||    
T  11785099 cttttattaaactgtctttattttataataaaaaagataaatttaaagttgtattgaaaattgtgtgagagaaaagttagaa-tatttattgagggtaaa 11785197  T
Q  272 gttggaagagaaaacttaaagttgtattggaaatataaagtaacat 317  Q
    ||||||||| |||| ||||||||||||||||||| |||||| ||||    
T  11785198 gttggaagaaaaaa-ttaaagttgtattggaaatgtaaagtgacat 11785242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 4132039 - 4132126
Alignment:
Q  241 agaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||||||| |||||||||| | |||||||||| |||| |||| |||||||||||||  |||| |||||| |||||||||||||||    
T  4132039 agaaaaagttggagtatttattgagggtaaagttgaaagaaaaaaattaaagttgtattaaaaatgtaaagtgacattcattttaaaa 4132126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 210 - 328
Target Start/End: Original strand, 19689870 - 19689985
Alignment:
Q  210 aaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataa 309  Q
    ||||||||||||| ||||| |||| || ||||||||| |||| ||||||| || |   ||||||||||||| || |  |||||||||||| ||||| |||    
T  19689870 aaaattaaagttgtattgacaattgtgtgagagaaaa-gttggagtatttttttagattaaagttggaagaaaata--taaagttgtattagaaatgtaa 19689966  T
Q  310 agtaacattcattttaaaa 328  Q
    |||||||||||||||||||    
T  19689967 agtaacattcattttaaaa 19689985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 174 - 328
Target Start/End: Complemental strand, 25932785 - 25932629
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagag-aaaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  ||||||||||||   | |||||||| |||||||| ||||||||||| || ||||| ||||||||  |||||||||| | | |||||    
T  25932785 ttttactaaaataaccttactttatagcaacaagacaaacttaaagttacattgaaaattgtgtgagagaaaaaagtttgagtatttattgaggataaag 25932686  T
Q  273 ttggaag-agaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    || |||| | |||| ||||||||| |||| |||| |||||  ||||||||| |||||    
T  25932685 ttagaagaaaaaaaattaaagttgcattgaaaatgtaaagccacattcattataaaa 25932629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 24163622 - 24163690
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttaggctttggcacaca-gattaagaaatgaaataa 157  Q
    ||||||||||||||||||||| ||||||||| ||||| |  | |||||||  |||||||||||||||||    
T  24163622 taatactccatccgttttaaagtgagtgtcgttttagccaattgcacacataattaagaaatgaaataa 24163690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 26669294 - 26669262
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgcttta 125  Q
    |||||||||||||||||||||||||||||||||    
T  26669294 tactccatccgttttaaaatgagtgtcgcttta 26669262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 126
Target Start/End: Original strand, 29713316 - 29713351
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||| |||||||||||||||||||||||||||    
T  29713316 aatactccttccgttttaaaatgagtgtcgctttag 29713351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 24555833 - 24555871
Alignment:
Q  88 tttaatactccatccgtttt-aaaatgagtgtcgcttta 125  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  24555833 tttaatactccatccgttttaaaaatgagtgtcgcttta 24555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 157
Target Start/End: Complemental strand, 25932873 - 25932807
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||| ||||||||||||||||| ||||||| ||||| |  |  ||||| ||||||||||||||||||    
T  25932873 aatattccatccgttttaaaataagtgtcgttttagccaattacacaccgattaagaaatgaaataa 25932807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 126
Target Start/End: Original strand, 32429239 - 32429273
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||||||||||||||| |||||    
T  32429239 atactccatccgttttaaaatgagtgtcgttttag 32429273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 6992557 - 6992508
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgc 223  Q
    |||||||||| |  |||||||||||||| |||||||||| ||||||||||    
T  6992557 ttttactaaaataaccttactttataagaaaaagacaaacttaaagttgc 6992508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 9940601 - 9940634
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgcttta 125  Q
    ||||||||||||||| ||||||||||||||||||    
T  9940601 atactccatccgtttcaaaatgagtgtcgcttta 9940634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 34519324 - 34519291
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||||||||||| |||||    
T  34519324 tactccatccgttttaaaatgagtgtcgttttag 34519291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 6992631 - 6992579
Alignment:
Q  105 tttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||||||||  ||||||| |  | |||||||||||||||||||||||||    
T  6992631 tttaaaatgagtggtgctttagtcaattgcacacagattaagaaatgaaataa 6992579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 26189462 - 26189494
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgcttta 125  Q
    |||||||||||||| ||||||||||||||||||    
T  26189462 tactccatccgtttcaaaatgagtgtcgcttta 26189494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 126
Target Start/End: Complemental strand, 28554798 - 28554770
Alignment:
Q  98 catccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||||||||||||    
T  28554798 catccgttttaaaatgagtgtcgctttag 28554770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 2e-62; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 88 - 324
Target Start/End: Original strand, 26965415 - 26965646
Alignment:
Q  88 tttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttactaa 182  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||     |||||||||||||||||| |||||||||||||    
T  26965415 tttaatactccatccgttttaaaataagtgtcactttaggctttgacacacagattaagaaataaaatgaaataatcattggatataacgcttttactaa 26965514  T
Q  183 actgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagaga 282  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||| || ||||| |||||||| ||         | ||||||||||||||| |    
T  26965515 actgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagag-aaaagttggag---------agggtaaagttggaagaaa 26965604  T
Q  283 aaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||| |||||||||||||| |||| |||||| |||||||||||    
T  26965605 aaaattaaagttgtattgaaaatgtaaagtgacattcatttt 26965646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 148 - 324
Target Start/End: Original strand, 37225567 - 37225742
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa 247  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||| ||||    
T  37225567 aatgaaataatcattggatataatacttttactaaactgtccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagag-aaaa 37225665  T
Q  248 gttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||   ||||||||| | ||||||||||||||| || | ||||||||||||||||||| |||||| |||||||||||    
T  37225666 gttagcgtatttattgagggtaaagttggaagaaaagaattaaagttgtattggaaatgtaaagtgacattcatttt 37225742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 91 - 324
Target Start/End: Original strand, 54933113 - 54933352
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa-----tcattggatatgacgcttttactaaact 185  Q
    |||||||||||||||||||||||||||||||||||| |  | ||||| | |||||| ||||||||||     |||   |  || ||  |||||||||| |    
T  54933113 aatactccatccgttttaaaatgagtgtcgctttagccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaat 54933212  T
Q  186 gtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaa 284  Q
      |||||||||||||| ||| |||||| |||||||||||||||||||| || |||||| |||||||| |||||||||| | ||||||||||||||| |||    
T  54933213 aaccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaa 54933312  T
Q  285 acttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    | ||||||||| ||||||||| |||||| |||||||||||    
T  54933313 aattaaagttgcattggaaatgtaaagtgacattcatttt 54933352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 96 - 328
Target Start/End: Original strand, 2567927 - 2568154
Alignment:
Q  96 tccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaactgtcct 190  Q
    ||||||||||||||||||| ||||| ||||| |  | ||||| ||||||||      ||||||||||||||| ||||| || ||||||| ||| ||||||    
T  2567927 tccatccgttttaaaatgaatgtcgttttagccaattgcacatagattaaggaattgaatgaaataatcattagatataacacttttacaaaaatgtcct 2568026  T
Q  191 tactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaa 290  Q
    ||||||||||| |||||||||| |||||||||||||||||||| || ||||||||||          |||  || ||||||||||||||| |||| ||||    
T  2568027 tactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaa----------ttagaaagggtaaagttggaagaaaaaaattaa 2568116  T
Q  291 agttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  2568117 agttgtattgaaaatgtaaagtaacattcattttaaaa 2568154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 146 - 310
Target Start/End: Original strand, 647562 - 647725
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaa 245  Q
    ||||||||||||||||| ||||| ||  ||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| ||  |||| ||    
T  647562 gaaatgaaataatcattagatataacagttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattctgtaagag-aa 647660  T
Q  246 aagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaa 310  Q
    |||||  |||||||||| | ||||||||||||||| |||| |||||||||||||| |||| ||||    
T  647661 aagttagagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgaaaatgtaaa 647725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 93 - 246
Target Start/End: Complemental strand, 790313 - 790155
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||||||||| ||||| | ||||||||||| |||||| |||||||||||     |||||||||||| |||| |||||||||||||||||     
T  790313 tactccctccgttttaaaattagtgttgttttaggctttgacacacatattaagaaatgtaatgaaataatcattgaatataacgcttttactaaactgc 790214  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||||| || |||||||||    
T  790213 ccttactttataagaaaaagtcaaaattaaagttgcattggaaattgtgtgagagaaaa 790155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 116 - 328
Target Start/End: Complemental strand, 19552750 - 19552542
Alignment:
Q  116 tgtcgctttaggctttggcacacagattaagaaatgaaat-----aatcattggatatgacgctttt-actaaactgtccttactttataaggaaaagac 209  Q
    ||||| ||||| |||||||||||| |||||||||||||||     ||||||||||||| ||| |||| |||||||||||||||||||||||| |||| ||    
T  19552750 tgtcgttttagactttggcacacaaattaagaaatgaaatgaaataatcattggatataacgttttttactaaactgtccttactttataagaaaaatac 19552651  T
Q  210 aaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataa 309  Q
    |||||||||||||||||||||||| || ||||| |||||||  ||         | ||||||||||||||| |||| |||||||||||||| |||| |||    
T  19552650 aaaattaaagttgcattgaaaattctgtgagag-aaaagttagag---------agggtaaagttggaagaaaaaatttaaagttgtattgaaaatgtaa 19552561  T
Q  310 agtaacattcattttaaaa 328  Q
    ||| |||||||||||||||    
T  19552560 agtgacattcattttaaaa 19552542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 27483116 - 27483331
Alignment:
Q  104 ttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttat 198  Q
    ||||||||||||||||||||||| |  | ||||||| |||||     ||||||||||||||||| || || || ||||||||||| |  |||||||||||    
T  27483116 ttttaaaatgagtgtcgctttagcccattgcacacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaatttcccttactttat 27483215  T
Q  199 aaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtat 298  Q
    ||| |||||||||| ||||||||||||||||||||||| ||||| |||||||| ||         | ||||||||||||||| |||| ||||||||||||    
T  27483216 aagaaaaagacaaacttaaagttgcattgaaaattatgtgagag-aaaagttggag---------agggtaaagttggaagaaaaaaattaaagttgtat 27483305  T
Q  299 tggaaatataaagtaacattcatttt 324  Q
    ||||||| |||||| |||||||||||    
T  27483306 tggaaatgtaaagtgacattcatttt 27483331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 148 - 324
Target Start/End: Original strand, 46362982 - 46363158
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa 247  Q
    ||||||||||||||| ||  | ||  |||||||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||| || ||||| ||||    
T  46362982 aatgaaataatcattagacctaacatttttactaaactgtccttactttataagaaaaatacaaatttaaagttgcattgtaaattgtgtgagag-aaaa 46363080  T
Q  248 gttgaagtatttattaaaggtaaagttggaag-agaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||| |||||||||| | |||||||||||||| | |||| |||||||||||||| |||| |||||| |||||||||||    
T  46363081 gttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 46363158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 114 - 328
Target Start/End: Complemental strand, 34060085 - 34059878
Alignment:
Q  114 agtgtcgctttaggctttggcacacagattaaga-----aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaaga 208  Q
    ||||||||||||||||||||||||||||||||||     ||||||||||| ||||||||| | | ||||||||||||  |||||||||||||| ||||||    
T  34060085 agtgtcgctttaggctttggcacacagattaagaaatggaatgaaataataattggatataaagtttttactaaactacccttactttataagaaaaaga 34059986  T
Q  209 caaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatata 308  Q
    |  |||||||||||||||||||||| |||||||| |||||||| ||         | |||||||||| |||| |||| |||||||||||||| |||| ||    
T  34059985 c--aattaaagttgcattgaaaattgtgcgagag-aaaagttggag---------agggtaaagttgaaagaaaaaaattaaagttgtattgaaaatgta 34059898  T
Q  309 aagtaacattcattttaaaa 328  Q
    || | |||||||||||||||    
T  34059897 aaatgacattcattttaaaa 34059878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 101 - 324
Target Start/End: Complemental strand, 43580712 - 43580481
Alignment:
Q  101 ccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaactgtccttactt 195  Q
    ||||||||||||||| | |||||||| |  | ||||||||||||||      |||||||||||||||  |||| ||  ||||||||||||| ||||  ||    
T  43580712 ccgttttaaaatgagcgacgctttagccaattgcacacagattaaggaatagaatgaaataatcattacatataacatttttactaaactgcccttgttt 43580613  T
Q  196 --tataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaag-agaaaacttaaag 292  Q
      |||| | |||||||||| |||||||||||||||||||| || |||| ||||||||| |||||||||||| |||||||||||||| | |||| ||||||    
T  43580612 tatatatgaaaaagacaaatttaaagttgcattgaaaattgtgtgagaaaaaaagttggagtatttattaagggtaaagttggaagaaaaaaaattaaag 43580513  T
Q  293 ttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| |||| |||||| ||||| |||||    
T  43580512 ttgtattgaaaatgtaaagtgacatttatttt 43580481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 93 - 246
Target Start/End: Complemental strand, 53716245 - 53716088
Alignment:
Q  93 tactccatccgtttt-aaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaat-----aatcattggatatgacgcttttactaaactg 186  Q
    ||||||||||||||| ||||||||||||||||||| ||||| |||| | |||||||||||||||     ||||||||||||| |||||||||||||||||    
T  53716245 tactccatccgttttcaaaatgagtgtcgctttagactttgacacataaattaagaaatgaaatgaaataatcattggatataacgcttttactaaactg 53716146  T
Q  187 tccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
      ||||||||||||| |||||||  |||||||||||||||||||| | || |||||||||    
T  53716145 ctcttactttataagaaaaagac--aattaaagttgcattgaaaactgtgtgagagaaaa 53716088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 2988606 - 2988756
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| | |||||||| |||||||||||||||||||| ||||||||| |||||||  |||||||||| | |||||||    
T  2988606 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgcgagagagaaaagtttgagtatttattgagggtaaag 2988705  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| |||| ||||| ||||||||||||| |||||| |||||||||||    
T  2988706 ttggaagaaaaaaattaaa-ttgtattggaaatgtaaagtgacattcatttt 2988756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 174 - 324
Target Start/End: Complemental strand, 43169491 - 43169340
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| | |||||||| ||||||||| |||||||||| || |||||| |||||||  |||||||||| |||||||||    
T  43169491 ttttactaaaataaccttactttataagaataagacaaacttaaagttgtattgaaaattgtgtgagagataaaagtttgagtatttattgaaggtaaag 43169392  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    || ||||| |||| ||||||||||||||||||| |||| | |||||||||||    
T  43169391 ttagaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcatttt 43169340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 146 - 324
Target Start/End: Complemental strand, 83478 - 83302
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaa 245  Q
    |||||||| |||||||| || |  || |||||||||||||  |||||||||||||| |||||||||| ||||||||||||||||||||  | ||||| ||    
T  83478 gaaatgaattaatcattagacacaacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaaaattgcgtgagag-aa 83380  T
Q  246 aagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||  |||||||| | | ||||||||||||||| |||| |||||||||||||| |||| |||| | |||||||||||    
T  83379 aagttagagtatttaatgagggtaaagttggaaga-aaaaattaaagttgtattgaaaatgtaaaatgacattcatttt 83302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 174 - 331
Target Start/End: Original strand, 25722457 - 25722615
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||| ||| | |||||||| |||||||||||||||||||| || |||||| |||||||| |||||||||| | |||||||    
T  25722457 ttttactaaaataaccttactttacaagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatttagggtaaag 25722556  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |  ||||| |||| |||||||||||||| |||| |||||| ||||||||||| ||||||    
T  25722557 tatgaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaataa 25722615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 92 - 324
Target Start/End: Complemental strand, 44854555 - 44854321
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-gaa----atgaaataatcattggatatgacgcttttactaaactg 186  Q
    ||||||||||||||| ||||||| ||||| ||||| |  | ||||| ||||||| |||    |||||||||||||| || |  || ||||||||||||||    
T  44854555 atactccatccgtttcaaaatgattgtcgttttagccaattgcacatagattaatgaattgaatgaaataatcattagaca--acacttttactaaactg 44854458  T
Q  187 tccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgc-gagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaa 285  Q
     |||||||||||||| |||| ||||| |||||||||||||||||||| | | ||||| |||||||| |||||||||| | |||||| |||||||| ||||    
T  44854457 cccttactttataagaaaaatacaaacttaaagttgcattgaaaattgtactgagag-aaaagttggagtatttattgagggtaaaattggaaga-aaaa 44854360  T
Q  286 cttaaagttgtattggaaatataaagtaacattcatttt 324  Q
     ||||| |||||||| |||| |||||| || ||||||||    
T  44854359 gttaaaattgtattgaaaatgtaaagtgacgttcatttt 44854321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 148 - 324
Target Start/End: Complemental strand, 38457641 - 38457466
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa 247  Q
    |||||||||||||||  | || || |||||||||||||| | ||||||||| || |||||| ||| ||||| |||||||||||||| || ||||| ||||    
T  38457641 aatgaaataatcattacacataacacttttactaaactgccattactttattagaaaaagataaacttaaaattgcattgaaaattgtgtgagag-aaaa 38457543  T
Q  248 gttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||| |||||||||| | |||||||||||| || |||| |||||||||||||| |||| |||| | | |||||||||    
T  38457542 gttggagtatttattgagggtaaagttggatgaaaaaaattaaagttgtattgaaaatgtaaaatgatattcatttt 38457466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 188 - 331
Target Start/End: Complemental strand, 44645481 - 44645337
Alignment:
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
    |||||||||||| | |||||| ||| |||||||||||||||||||||||  ||||| |||||||| |||||||||| | ||||||||||||||| ||||     
T  44645481 ccttactttatatgaaaaagataaacttaaagttgcattgaaaattatgtaagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaa 44645382  T
Q  287 ttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    ||||||||| || |||||| |||||  ||||||||||| ||||||    
T  44645381 ttaaagttgcatgggaaatgtaaagcgacattcattttgaaataa 44645337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 15514751 - 15514877
Alignment:
Q  202 gaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaag-agaaaacttaaagttgtattg 300  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||| ||||||||||||| || | |||| ||||||||||||||    
T  15514751 gaaaagacaaacttaaagttgcattgaaaattatgcgagag-aaaagttggagtatctattgaaggtaaagttgggagaaaaaaaattaaagttgtattg 15514849  T
Q  301 gaaatataaagtaacattcattttaaaa 328  Q
    ||||| |||||| ||||| |||| ||||    
T  15514850 gaaatgtaaagtgacatttatttgaaaa 15514877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 93 - 324
Target Start/End: Original strand, 20512406 - 20512644
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa-----tcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||||||||||||||||||||||| |  | ||||||||||||||||||  |||||     |||   |  ||  |  |||||||||| |      
T  20512406 tactccctccgttttaaaatgagtgtcgctttagtcaattgcacacagattaagaaattgaataaaatagtcaaatgtcatagcaattttactaaaataa 20512505  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaag-agaaaa 285  Q
    |||||||||||||| |||| ||||| ||||||||| |||||||||| || |||||| |||||||| |||||||||| |||||||||||||||| | ||||    
T  20512506 ccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgaaggtaaagttggaagaaaaaaa 20512605  T
Q  286 cttaaagttgtattggaaatataaagtaacattcatttt 324  Q
     ||||||||| |||| |||| |||||  |||||||||||    
T  20512606 tttaaagttgcattgaaaatgtaaagcgacattcatttt 20512644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 43687879 - 43688033
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| | |||||||| |||||||| ||||||||||| || |||||| |||||||| |||||||||| | |||||||    
T  43687879 ttttactaaaataaccttactttataagaacaagacaaatttaaagtttcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaag 43687978  T
Q  273 ttggaag---agaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||   | |||| ||||||||||||||||||| |||||| ||||| |||||    
T  43687979 ttggaagaaaaaaaaaattaaagttgtattggaaatgtaaagtgacatttatttt 43688033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 148 - 331
Target Start/End: Original strand, 1340901 - 1341074
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa 247  Q
    ||||||||||| ||| || || || ||||| ||||| |||| |||||||||||| |||||||||| |||||||||||||||||||| || ||||| ||||    
T  1340901 aatgaaataataattagacataacactttttctaaagtgtctttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagag-aaaa 1340999  T
Q  248 gttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |||| ||         | ||||| ||||||||| |||| |||||||||||||| |||| |||||| ||||||||||||||||||    
T  1341000 gttggag---------agggtaacgttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaataa 1341074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 174 - 328
Target Start/End: Original strand, 32303901 - 32304056
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| ||||| |||| |||||| || |||||||||| ||  ||||| |||||||  |||||||||| | |||||||    
T  32303901 ttttactaaaataaccttactttataagaaaaaggcaaacttaaagctgtattgaaaattgtgtaagagagaaaagtttgagtatttattgagggtaaag 32304000  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||| |||| |||||||||||||| |||| |||||| |||||||||| ||||    
T  32304001 ttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttcaaaa 32304056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 203 - 328
Target Start/End: Complemental strand, 3000879 - 3000754
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaac-ttaaagttgtattgg 301  Q
    |||||||||| |||||||||||||||||||| || ||||||||| |||| |||||||||| | |||| |||||| ||| ||||  ||||||||||||||     
T  3000879 aaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaa-gttggagtatttattgagggtagagttgggagaaaaaaaattaaagttgtattga 3000781  T
Q  302 aaatataaagtaacattcattttaaaa 328  Q
    |||| ||||||||||||||||||||||    
T  3000780 aaatgtaaagtaacattcattttaaaa 3000754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 93 - 328
Target Start/End: Complemental strand, 25061934 - 25061706
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||||||||||| ||||||||||||| ||||| |  | ||||||| |||||     ||||||||||||||||| || || || |||||||||||||      
T  25061934 tactccatccgtttaaaaatgagtgtcgttttagccgattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaactac 25061835  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
    ||||||||||||||  ||| ||||| |||||||||||||||||||| |  ||||| |||||||| ||         |  |||||||||| ||| |||| |    
T  25061834 ccttactttataag--aaaaacaaacttaaagttgcattgaaaattgtatgagag-aaaagttggag---------agagtaaagttgggagaaaaaaat 25061747  T
Q  288 taaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||||||||||||| ||||||  ||||||||||||||    
T  25061746 taaagttgtattggaaatgtaaagtggcattcattttaaaa 25061706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 203 - 310
Target Start/End: Original strand, 35099393 - 35099499
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||  |||| ||||||||||| ||||||||||| ||| |||| ||||||||||||||||    
T  35099393 aaaagacaaacttaaaattgcattgaaaattgtgcgagagaaaagtttga-gtatttattaagggtaaagttgggagaaaaaaattaaagttgtattgga 35099491  T
Q  303 aatataaa 310  Q
    ||| ||||    
T  35099492 aatgtaaa 35099499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 324
Target Start/End: Complemental strand, 54261572 - 54261421
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| |||| ||||| ||||||||| |||||||||| || |||||| |||||||  |||||||||| | |||||||    
T  54261572 ttttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttagagtatttattgagggtaaag 54261473  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| |||| ||||||||| |||| |||| |||||  || ||||||||    
T  54261472 ttggaagaaaaaaattaaagttgcattgaaaatgtaaagcgacgttcatttt 54261421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 173 - 324
Target Start/End: Complemental strand, 27027893 - 27027739
Alignment:
Q  173 cttttactaaactgtccttactttat----aaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggt 268  Q
    |||||| |||| ||||||||||||||    ||  |||||||||| |||||||||||||||||||| || ||||| |||||||| |||||||||||| | |    
T  27027893 cttttaataaagtgtccttactttataaaaaaaaaaaagacaaatttaaagttgcattgaaaattgtgtgagag-aaaagttggagtatttattaaggat 27027795  T
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||| ||||| |||| ||||| ||||||||||||| |||| | ||||| |||||    
T  27027794 aaagtttgaagaaaaaaattaaatttgtattggaaatgtaaattgacattaatttt 27027739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 152 - 331
Target Start/End: Complemental strand, 41287255 - 41287075
Alignment:
Q  152 aaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttg 251  Q
    ||||||||||| || || || ||||||||||||||  |||| |||||| | ||||  |||| |||||||||||||||||||| || |||| |||  |||     
T  41287255 aaataatcattagacataacacttttactaaactgcacttattttatatgaaaaactcaaacttaaagttgcattgaaaattgtgtgaga-aaatggttt 41287157  T
Q  252 aagtatttattaaaggtaaagttggaagagaaaac--ttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
     |||||||||| | || |||||||||||| ||||   ||||||||||||||||||| |||||| |||| |||||||||||||    
T  41287156 gagtatttattgagggaaaagttggaagaaaaaaaaattaaagttgtattggaaatgtaaagtgacatccattttaaaataa 41287075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 203 - 328
Target Start/End: Complemental strand, 4392030 - 4391906
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||| | ||||||||||| ||| |||| ||||| ||||| |  |    
T  4392030 aaaagacaaacttaaagttgcattgaaaattgtgcgagag-aaaagttggagtatttattgagggtaaagttgggagaaaaaaattaaaattgtactaaa 4391932  T
Q  303 aatataaagtaacattcattttaaaa 328  Q
    ||| |||||| | |||||||||||||    
T  4391931 aatgtaaagtgatattcattttaaaa 4391906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 93 - 328
Target Start/End: Original strand, 44648322 - 44648552
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||| ||||||||||||| ||||| |  | |||||||||||||     ||||||||||||||||| || || || ||||||||||||||     
T  44648322 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgc 44648421  T
Q  188 ccttactttataag-gaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
    | ||||||||| ||  |||||||||| ||||||||| |||||||||| || |||| ||||||||| ||         |  |||||||||||| | ||||     
T  44648422 ctttactttatgagaaaaaagacaaacttaaagttgaattgaaaattgtgtgaga-aaaaagttggag---------agagtaaagttggaa-aaaaaaa 44648510  T
Q  287 ttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
     |||||||||||||||||| |||||| |||||||||||||||    
T  44648511 ataaagttgtattggaaatgtaaagtgacattcattttaaaa 44648552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 147 - 247
Target Start/End: Original strand, 2662463 - 2662563
Alignment:
Q  147 aaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||||||||||||||| || || || ||||||||||| || ||||| |||||||| |||||||||| |||||||||||||||||||| || |||||||||    
T  2662463 aaatgaaataatcattagacataacacttttactaaattgcccttattttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaa 2662562  T
Q  247 a 247  Q
    |    
T  2662563 a 2662563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 87 - 241
Target Start/End: Complemental strand, 40049121 - 40048962
Alignment:
Q  87 atttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttacta 181  Q
    ||||| |||||| ||||||||||||| |||||||||||||   || ||||||  |||||| ||||     ||||||||||| || || || |||||| ||    
T  40049121 atttattactccctccgttttaaaattagtgtcgctttagctatttgcacacgaattaaggaatggaatgaaataatcattagacataacacttttatta 40049022  T
Q  182 aactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgaga 241  Q
    || || | |||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  40049021 aattgcctttactttataagaaaaagacaaatttaaagttgcattgaaaattatgagaga 40048962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 92 - 328
Target Start/End: Complemental strand, 5244826 - 5244588
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttactaaactg 186  Q
    ||||||| ||||||| | ||||| | | | || ||| ||||||||||| ||||||||||     |||||||||||| || || || |||||| |||| |     
T  5244826 atactccctccgtttcacaatgaattttgtttaaggatttggcacacatattaagaaattgaatgaaataatcattagacataacacttttattaaagtc 5244727  T
Q  187 tccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
    || |||||| ||||| |||| ||||| ||||||||||||||||||| ||| |||||||||| ||  |||||||||| | ||||||||||| | | ||||     
T  5244726 tctttactt-ataagaaaaaaacaaacttaaagttgcattgaaaataatgtgagagaaaaa-ttagagtatttattgagggtaaagttgg-ataaaaaaa 5244630  T
Q  287 ttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||| ||||  |||| ||| || |||||||||||||||    
T  5244629 ttaaagttatattaaaaatgtaaggtgacattcattttaaaa 5244588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 328
Target Start/End: Complemental strand, 22731112 - 22730927
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcatt-------gaaaattatgcgag 240  Q
    |||||||||||||||  | || ||  ||||||||||||| ||| | |||||||| |||||||||| |||||||| ||||       |||| || || |||    
T  22731112 aatgaaataatcattaaacataacatttttactaaactg-cctcaatttataagaaaaagacaaacttaaagttacattttacattgaaatttgtgtgag 22731014  T
Q  241 agaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||  |||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||| |||| | ||||||| |||||||    
T  22731013 agaaaagtttga-gtatttattgaaggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaattgacattcagtttaaaa 22730927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 93 - 324
Target Start/End: Complemental strand, 51381967 - 51381727
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa--tcattggatatga---cgcttttactaaactgt 187  Q
    |||||||| ||||| ||||||||||||||||||| |  | |||||||||||||| ||||||||||  |  |   |||| |   |  |||||||||| |      
T  51381967 tactccattcgtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaataaaatagtcaaatatcatagcagttttactaaaataa 51381868  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga---aaaagttgaagtatttattaaaggtaaagttggaag-agaa 283  Q
    |||||||||||||  |||||||||| |||||||||||||||||||| || ||||||   |||| ||| |||||||||  | ||||||||| |||| | ||    
T  51381867 ccttactttataataaaaagacaaacttaaagttgcattgaaaattgtgtgagagagagaaaaattggagtatttatcgagggtaaagttagaagaaaaa 51381768  T
Q  284 aacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    || |||||||||||||| |||| |||||| ||||| |||||    
T  51381767 aaattaaagttgtattgtaaatgtaaagtgacatttatttt 51381727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 35239516 - 35239444
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| || |||||||||    
T  35239516 ttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcagtgaaaattgtgtgagagaaaa 35239444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 227
Target Start/End: Original strand, 38165633 - 38165712
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattg 227  Q
    |||||||||||||||  | || || ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  38165633 aatgaaataatcattaaacataacacttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcattg 38165712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 310
Target Start/End: Complemental strand, 53560821 - 53560685
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| |||||||||  ||||||||||||||||||||||| |||||| |||||||  ||| |||||  | | |||||    
T  53560821 ttttactaaaataaccttactttataagaaaaagacaatcttaaagttgcattgaaaattatgtgagagagaaaagtttgagtttttatcgaggataaag 53560722  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaa 310  Q
    |||||||| |||| ||||||||| |||| |||| ||||    
T  53560721 ttggaaga-aaaaattaaagttgcattgtaaatgtaaa 53560685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 36310290 - 36310397
Alignment:
Q  217 aagttgcattgaaaattatgcgagagaaaaagttgaagtattt-attaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaac 315  Q
    ||||||||||||||||| ||||||||||||| |||| |||||| ||| ||||||||||||| ||| ||||  |||||||||||||||||| |||| | ||    
T  36310290 aagttgcattgaaaattgtgcgagagaaaaatttga-gtattttattgaaggtaaagttgggagaaaaaaaataaagttgtattggaaatgtaaaatgac 36310388  T
Q  316 attcatttt 324  Q
    ||| |||||    
T  36310389 atttatttt 36310397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 310
Target Start/End: Complemental strand, 27039501 - 27039347
Alignment:
Q  156 aatcattggatatgacgcttttactaaactgtccttactttataaggaaaa-gacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaag 254  Q
    |||||||  |||| || ||||||||||| ||||||||||||||||  |||| |||||| |||||||||||||||||||| || |||||  ||||||| ||    
T  27039501 aatcattaaatataacacttttactaaagtgtccttactttataaaaaaaaagacaaatttaaagttgcattgaaaattgtgtgagag-gaaagttggag 27039403  T
Q  255 tatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaa 310  Q
    ||||||||||   |||||||| || | |||| ||||| ||||| || |||| ||||    
T  27039402 tatttattaagaataaagttgaaaaaaaaaaattaaatttgtaatgaaaatgtaaa 27039347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 174 - 324
Target Start/End: Complemental strand, 36541648 - 36541497
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||| ||||||| | | |||||||| |||||||||||| ||||||| || |||||| |||||||| | |||||||| | |||||||    
T  36541648 ttttactaaaattaccttgctttataggaacaagacaaacttaaagttgcatcgaaaattgtgtgagagagaaaagttggaatatttattgagggtaaag 36541549  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| | ||  ||||||||||||| |||| ||||   |||||||||||    
T  36541548 ttggaagaaataaagtaaagttgtattgaaaatgtaaaacgacattcatttt 36541497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 146 - 331
Target Start/End: Original strand, 43600160 - 43600344
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtcctt-actttataaggaaaa-gacaaaattaaagttgcattgaaaattatgcgagaga 243  Q
    ||||| ||||||| ||| ||||| ||  ||||||||||||  |||| |||||||||  |||| |||||| ||||||||  |||| ||||| || ||||||    
T  43600160 gaaataaaataattattagatataacatttttactaaacttccctttactttataaaaaaaatgacaaatttaaagttatattggaaattgtgtgagaga 43600259  T
Q  244 aaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    ||| || || ||||||||| | ||||||||||||||| |||| ||||| |||||||| |||| |||||||||||| ||||| ||||||    
T  43600260 aaa-gtaga-gtatttattgagggtaaagttggaagaaaaaa-ttaaaattgtattgaaaatgtaaagtaacatttattttgaaataa 43600344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 53716090 - 53716031
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  53716090 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtaacattcattttaaaa 53716031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 93 - 326
Target Start/End: Original strand, 31290886 - 31291113
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||||||||||||||||| ||||| |  |  |||||||||||||     |||||||||||| ||| || || || ||||||||||||||     
T  31290886 tactccctccgttttaaaatgagtgtcgttttagccaattacacacagattaaggaatgaaatgaaataattattagacataacacttttactaaactgc 31290985  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
    | ||| ||||| || |||||| ||| ||||||||||| |||||||| || ||||||||| |||||||         |   |||||||| |||| |||| |    
T  31290986 ctttattttattagaaaaaga-aaacttaaagttgcaatgaaaattgtgtgagagaaaa-gttgaag---------agcataaagttgaaagaaaaaaat 31291074  T
Q  288 taaagttgtattggaaatataaagtaacattcattttaa 326  Q
    |||||||||||| ||||| |||||| | |||||||||||    
T  31291075 taaagttgtattagaaatgtaaagtgatattcattttaa 31291113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 328
Target Start/End: Original strand, 36771574 - 36771718
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    |||||||||||||  |||| |||||||| |||||||||| |||||||||||||||||||| || ||||| |||||||| ||         | | ||||||    
T  36771574 ttttactaaactgctcttattttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagag-aaaagttggag---------aggataaagt 36771663  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    || |||  |||| |||||||||||||| |||| |||||| |||||||||||||||    
T  36771664 tgaaagtaaaaaattaaagttgtattgtaaatgtaaagtgacattcattttaaaa 36771718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 324
Target Start/End: Complemental strand, 50420379 - 50420265
Alignment:
Q  208 acaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatat 307  Q
    ||||| ||||||||||||||||||||  ||||||| |||||||  |||||||||| || |||||||||||||| |||| |||||||||||||  |||| |    
T  50420379 acaaacttaaagttgcattgaaaattgcgcgagag-aaaagttagagtatttattgaaagtaaagttggaaga-aaaaattaaagttgtattaaaaatgt 50420282  T
Q  308 aaagtaacattcatttt 324  Q
    ||| | ||||| |||||    
T  50420281 aaaatgacatttatttt 50420265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 202 - 331
Target Start/End: Complemental strand, 22414881 - 22414754
Alignment:
Q  202 gaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaag-agaaaacttaaagttgtattg 300  Q
    ||||||| ||| |||||||||||||||||||| ||  ||||  || |||| |||||||||| |||||||||||||||| | |||| |||||||| ||||     
T  22414881 gaaaagagaaacttaaagttgcattgaaaattgtgtaagag--aaggttg-agtatttattgaaggtaaagttggaagaaaaaaaattaaagttatatta 22414785  T
Q  301 gaaatataaagtaacattcattttaaaataa 331  Q
     |||| |||||| ||||||||||| ||||||    
T  22414784 aaaatgtaaagtgacattcattttgaaataa 22414754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 93 - 229
Target Start/End: Original strand, 43736783 - 43736922
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag----aaatgaaataatcattggatatgacgcttttactaaactgtc 188  Q
    |||||||||||||| ||||||||||||||||||| |  | ||||| |  ||| |    |||||||||||||||| ||||| || |||||||||||||       
T  43736783 tactccatccgtttcaaaatgagtgtcgctttagccaattgcacaaaatttagggatgaaatgaaataatcattagatataacacttttactaaactact 43736882  T
Q  189 cttactttataaggaaaagacaaaattaaagttgcattgaa 229  Q
    |||| |||||||| |||||| ||| ||||||||||||||||    
T  43736883 cttattttataagaaaaaga-aaacttaaagttgcattgaa 43736922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 51398254 - 51398187
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||||| ||||||| ||||||||||||||||||| |  | |||||||||||||||||||||||||    
T  51398254 taatactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaatgaaataa 51398187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 328
Target Start/End: Original strand, 42857125 - 42857210
Alignment:
Q  243 aaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||||| |||||||||  ||||||||||| ||||| |||| |||| ||||||| |||||| |||||| |||||| ||||||||    
T  42857125 aaaaagttggagtatttatcgaaggtaaagttagaagaaaaaaattaatgttgtatgggaaatgtaaagtgacattccttttaaaa 42857210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 188 - 331
Target Start/End: Original strand, 42007072 - 42007215
Alignment:
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagag-aaaaagttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
    ||||| |||||||| | |||||||| |||||||||||||||||||| |  || || ||||||||  |||||||||||| | |||||||  || | ||||     
T  42007072 ccttattttataagaacaagacaaacttaaagttgcattgaaaattgtatgaaagaaaaaagtttgagtatttattaaggataaagtt-taaaaaaaaat 42007170  T
Q  287 ttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    ||||| |||||||| |||| ||||   ||||||||||||||||||    
T  42007171 ttaaaattgtattgaaaatgtaaaacgacattcattttaaaataa 42007215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 246
Target Start/End: Complemental strand, 16240809 - 16240659
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaactg 186  Q
    ||||||||||||||| ||||||||||||| ||||| || | ||||||| |||| |     |||||||||||||||| || || ||  ||||||||||| |    
T  16240809 atactccatccgtttcaaaatgagtgtcgttttagcctattgcacacaaattagggaatgaaatgaaataatcattagacataacatttttactaaacag 16240710  T
Q  187 tccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
     ||         ||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  16240709 ccc---------aagaaaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaa 16240659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 324
Target Start/End: Complemental strand, 49470915 - 49470795
Alignment:
Q  205 aagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaa 303  Q
    |||||||| |||||| ||||||||||||| ||  ||||| |||||||| ||||||||||   | |||| ||||| || |||| |||||||||||||| ||    
T  49470915 aagacaaacttaaagctgcattgaaaattgtgtaagagagaaaagttggagtatttattgtggctaaatttggatgaaaaaaattaaagttgtattgaaa 49470816  T
Q  304 atataaagtaacattcatttt 324  Q
    || ||||   |||||||||||    
T  49470815 atgtaaaacgacattcatttt 49470795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 47895246 - 47895317
Alignment:
Q  86 tatttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||| |||| | ||||||||||||||||||||||||||| |  | ||||||| |||||| ||||||||||    
T  47895246 tatttattacttcctccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataa 47895317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 33193938 - 33194004
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||| || |||| ||||||||||||||||||| |  | |||||||||||||| ||||||||||    
T  33193938 aatactccctcagtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaataa 33194004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 331
Target Start/End: Complemental strand, 45095615 - 45095552
Alignment:
Q  266 ggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    ||||||||||||| | |||  |||||||||||||| |||| |||||| ||||||||||||||||||    
T  45095615 ggtaaagttggaaaaaaaa--ttaaagttgtattgaaaatgtaaagtgacattcattttaaaataa 45095552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 126
Target Start/End: Original strand, 51397959 - 51397997
Alignment:
Q  88 tttaatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  51397959 tttaatactccatccgttttaaaatgagtgtcgttttag 51397997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 52222816 - 52222873
Alignment:
Q  248 gttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaat 305  Q
    |||| |||||||| | | ||||||||||||||| |||| |||||||||||||||||||    
T  52222816 gttggagtatttactgagggtaaagttggaagaaaaaaattaaagttgtattggaaat 52222873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 42939923 - 42939955
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgcttta 125  Q
    |||||||||||||||||||||||||||||||||    
T  42939923 tactccatccgttttaaaatgagtgtcgcttta 42939955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 790157 - 790102
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||| ||||| |||| ||||||||||||||||||| |||||| ||||| |||||    
T  790157 aaagtttgaagaaaaaaattaaagttgtattggaaatgtaaagtgacattaatttt 790102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 30706700 - 30706661
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttg 132  Q
    |||||| ||||||| |||||||||||||||||||||||||    
T  30706700 tactccctccgtttcaaaatgagtgtcgctttaggctttg 30706661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 35239446 - 35239392
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||| |||| ||||||||||||| ||||| |||||| |||||||||||    
T  35239446 aaagttggaagaaaaaa-ttaaagttgtattagaaatgtaaagtgacattcatttt 35239392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 126
Target Start/End: Complemental strand, 36461048 - 36461013
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||| |||||||||||||||||||||||||||    
T  36461048 aatactccttccgttttaaaatgagtgtcgctttag 36461013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 42740298 - 42740231
Alignment:
Q  264 aaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |||||||| |||||||| |||| |||||||  ||||  ||||||||||| ||||| ||||||||||||    
T  42740298 aaggtaaaattggaagaaaaaaattaaagtgatattaaaaatataaagtgacatttattttaaaataa 42740231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 186
Target Start/End: Original strand, 42857010 - 42857101
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaactg 186  Q
    ||||||||||||||||||||| |||||||  |  |||||||||||||     |||||||||||||||| || || ||  |||||||||||||    
T  42857010 tccgttttaaaatgagtgtcgttttaggcaattacacacagattaaggaatcaaatgaaataatcattagacataacatttttactaaactg 42857101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 45213629 - 45213695
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||| ||  ||||||||||||||||||||||| |  | ||||||| |||||| ||||||||||    
T  45213629 aatactccctctattttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataa 45213695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 54261659 - 54261601
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat 150  Q
    ||||||| ||||||| ||||||||||||||||||| |  |  |||||||||||||||||    
T  54261659 atactccctccgtttcaaaatgagtgtcgctttagccaattacacacagattaagaaat 54261601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 4758945 - 4758978
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||| |||||||||||||||||||||||||||||    
T  4758945 tacttcatccgttttaaaatgagtgtcgctttag 4758978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 30186328 - 30186361
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||||||||||| |||||    
T  30186328 tactccatccgttttaaaatgagtgtcgttttag 30186361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 38100123 - 38100058
Alignment:
Q  253 agtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacatt 318  Q
    |||||||| | | ||||||||||||| |||||| ||||||||||| || ||||| ||| |||||||    
T  38100123 agtatttactgatggtaaagttggaacagaaaaattaaagttgtaatgaaaatacaaattaacatt 38100058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 40048849 - 40048882
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||||||||||||| ||||||    
T  40048849 tactccatccgttttaaaatgagtgtcactttag 40048882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 43169289 - 43169322
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||| |||||||||||||||||||||||||||    
T  43169289 tactccctccgttttaaaatgagtgtcgctttag 43169322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 9167766 - 9167810
Alignment:
Q  266 ggtaaagttggaagagaaaacttaaagttgtattggaaatataaa 310  Q
    |||||||| |||||| |||| |||||||||||||| |||||||||    
T  9167766 ggtaaagtaggaagaaaaaaattaaagttgtattgaaaatataaa 9167810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 41850622 - 41850558
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||||||||| |||||||||| ||||||||    | ||||||| |||||| ||||||||||    
T  41850622 tactccatccgtttcaaaatgagtggcgctttagctaattgcacacatattaaggaatgaaataa 41850558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 42791418 - 42791386
Alignment:
Q  214 ttaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||||||||||||||||||| |||||||||    
T  42791418 ttaaagttgcattgaaaattatgtgagagaaaa 42791386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 44064365 - 44064433
Alignment:
Q  83 aattatttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg 151  Q
    |||||||| ||| | ||||||||| ||||||||||||  |||||| |||  |||||| |||||||||||    
T  44064365 aattattttataattcatccgtttcaaaatgagtgtctttttaggtttttacacacatattaagaaatg 44064433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 44645291 - 44645327
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  44645291 taatactccatccgtttcaaaatgagtgtcgttttag 44645327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 51057662 - 51057702
Alignment:
Q  86 tatttaatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||| ||||| ||||||||||||||||||||||| |||||    
T  51057662 tattttatacttcatccgttttaaaatgagtgtcgttttag 51057702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 2e-62; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 108 - 324
Target Start/End: Original strand, 4840654 - 4840874
Alignment:
Q  108 aaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaaactgtccttactttataagg 202  Q
    ||||||||||||| |||||||||||||||||| |||||||||||     ||||||||||||||||| ||| ||||||||||||| ||||||||||||||     
T  4840654 aaaatgagtgtcgttttaggctttggcacacatattaagaaatggaatgaaataatcattggatataacgtttttactaaactgcccttactttataaga 4840753  T
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    ||||||||||||||||||||||||||||| | || | ||| |||||||  |||||||||| | ||||||||||||||| |||| ||||||||||||||||    
T  4840754 aaaagacaaaattaaagttgcattgaaaactgtgtgggag-aaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgtattgga 4840852  T
Q  303 aatataaagtaacattcatttt 324  Q
    ||| |||||| |||||||||||    
T  4840853 aatgtaaagtgacattcatttt 4840874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 108 - 310
Target Start/End: Complemental strand, 43460995 - 43460792
Alignment:
Q  108 aaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaaactgtccttactttataagg 202  Q
    ||||||||||||| |||| |||||||||||| | ||||||||||     ||||||||||||||||   | |||||||||||||| |||||||||||||||    
T  43460995 aaaatgagtgtcgttttaagctttggcacacggtttaagaaatggaatgaaataatcattggata---cacttttactaaactgcccttactttataagg 43460899  T
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||    
T  43460898 aaaagacaaaattaaagttgtattgaaaattatgtgagag-aaaagttgaagtatttattgagggtaacgttggaagagaaaacttaaagttgtattgga 43460800  T
Q  303 aatataaa 310  Q
    ||| ||||    
T  43460799 aatgtaaa 43460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 100 - 331
Target Start/End: Original strand, 1298699 - 1298934
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttactaaactgtccttact 194  Q
    ||||||| ||||||||||||||||||| |||| ||| | ||||||||||||     ||||||||||||| |||| ||| |||||||||| || |||||||    
T  1298699 tccgtttcaaaatgagtgtcgctttagactttagcatagagattaagaaataaaatgaaataatcattgaatataacgtttttactaaattgcccttact 1298798  T
Q  195 ttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagtt 294  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| || ||||||| | | ||||||| || ||||||| ||||||||    
T  1298799 ttataagaaaaagacaaaattaaagttgcattgaaaattatgtgagag-aaaagttggagaatttattgaggataaagttcgatgagaaaaattaaagtt 1298897  T
Q  295 gtattggaaatataaagtaacattcattttaaaataa 331  Q
    ||||| ||||| |||||| ||||||||||| ||||||    
T  1298898 gtattagaaatgtaaagtgacattcattttgaaataa 1298934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 93 - 246
Target Start/End: Original strand, 4766129 - 4766282
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataatcattggatatgacgcttttactaaactgtcctta 192  Q
    |||||| ||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| | ||||||||||| | |||    
T  4766129 tactccttccgttttaaaatgaatgtcgctttagcctttggtacacagattaagaaatgaaataatcattggatataacgttattactaaactgccttta 4766228  T
Q  193 ctttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  4766229 ctttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaa 4766282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 91 - 328
Target Start/End: Complemental strand, 7743643 - 7743402
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaact 185  Q
    |||||| ||||||||| ||||||||||||||||||| |  |  ||||||||||||      |||||||||||||||  ||||| || ||||||||||  |    
T  7743643 aatactacatccgtttcaaaatgagtgtcgctttagccaatttcacacagattaaagaattaaatgaaataatcatcagatataacacttttactaagtt 7743544  T
Q  186 gtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaa 285  Q
    | |||||||||||||| |||||||||| |||||||||||||||||||| || ||||| |||||||| | |||||||| | ||||||||||||||| |||     
T  7743543 gcccttactttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagag-aaaagttggactatttattgagggtaaagttggaagaaaaag 7743445  T
Q  286 cttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
     ||||||||||||||||||| |||||| |||||||||||||||    
T  7743444 attaaagttgtattggaaatgtaaagtgacattcattttaaaa 7743402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 100 - 246
Target Start/End: Complemental strand, 40410676 - 40410525
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaat-----aatcattggatatgacgcttttactaaactgtccttact 194  Q
    ||||||||||||| ||||||||||||||| ||| |||||||||||||||||| |||     ||||||||||||| ||||||||| ||||||| |||||||    
T  40410676 tccgttttaaaataagtgtcgctttaggcgttgtcacacagattaagaaatggaatgacataatcattggatataacgcttttattaaactgcccttact 40410577  T
Q  195 ttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||| ||||||||||||||||||||||||||||||| ||  ||||||||    
T  40410576 ttataagaaaaagacaaaattaaagttgcattgaaaattgtgtcagagaaaa 40410525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 93 - 328
Target Start/End: Complemental strand, 24775429 - 24775190
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaaga-----aatgaaataatcattggatatgacgcttttactaaactgt 187  Q
    ||||||||||||||||| |||||||||| ||||| |  | ||||||| ||||||      ||||||||||||||| ||||| || ||||||||||| ||     
T  24775429 tactccatccgttttaagatgagtgtcgttttagtcaattgcacacaaattaaggtattgaatgaaataatcattagatataacacttttactaaaatgc 24775330  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
     ||||||||||||| |||| ||||| ||||||||  |||||||||| || ||||| ||||||||||||||||||| | |||||| |||| ||| |||| |    
T  24775329 tcttactttataagaaaaaaacaaacttaaagttatattgaaaattgtgtgagag-aaaagttgaagtatttattgagggtaaacttgggagaaaaaaat 24775231  T
Q  288 taaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||| |||||||| |||| |||||| ||| |||||||||||    
T  24775230 taaaattgtattgaaaatgtaaagtgacaatcattttaaaa 24775190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 174 - 330
Target Start/End: Complemental strand, 16316863 - 16316708
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    |||||||||| || ||||||| |||||| ||||||||||||||||||||||||||||||| || |||| |||| |||| | |||||||| || ||||| |    
T  16316863 ttttactaaattgcccttactgtataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagataaaa-gttggaatatttattgaaagtaaatt 16316765  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaata 330  Q
    ||||||| |||| |||||||||||||||||||||||||| ||||||| ||| |||||    
T  16316764 tggaagaaaaaaattaaagttgtattggaaatataaagtgacattcaatttgaaata 16316708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 147 - 324
Target Start/End: Original strand, 43344194 - 43344368
Alignment:
Q  147 aaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||||||||||||||| || || ||  ||||| |||||   |||||||||||||| |||||| ||  ||||||||| ||||||||||||| |||||||||    
T  43344194 aaatgaaataatcattagacataacaattttattaaaccacccttactttataagaaaaagataagtttaaagttgtattgaaaattatgtgagagaaaa 43344293  T
Q  247 agttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    | ||  |||||||||||||||||||||||||  |||||| |||||||||||||| |||||||| || |||||||||||    
T  43344294 a-ttagagtatttattaaaggtaaagttgga--agaaaaattaaagttgtattgaaaatataaggtgacattcatttt 43344368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 92 - 325
Target Start/End: Original strand, 40987193 - 40987419
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactg 186  Q
    ||||||| |||||||||||||||||||||||||||    | ||||||| |||||     ||||||||||||||||| || || || ||||||||||| ||    
T  40987193 atactccctccgttttaaaatgagtgtcgctttagctcattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaattg 40987292  T
Q  187 tccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||| || |||   |||||||| ||         | ||||||||||||||| ||||     
T  40987293 tccttactttataagaaaaagataaatttaaagttgcattgaaaattgtgagag---aaaagttggag---------agggtaaagttggaagaaaaaaa 40987380  T
Q  287 ttaaagttgtattggaaatataaagtaacattcatttta 325  Q
    |||||||||||||| |||| |||||  ||||||||||||    
T  40987381 ttaaagttgtattgaaaatgtaaagcgacattcatttta 40987419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 174 - 311
Target Start/End: Complemental strand, 41984575 - 41984436
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaa-ttaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaa 271  Q
    |||||||||| |  |||||||||||||| | ||||||||| |||||||||||||||||||| || | |||| |||||||| |||||||||||||||||||    
T  41984575 ttttactaaaataaccttactttataagaataagacaaaacttaaagttgcattgaaaattgtgtgtgagagaaaagttggagtatttattaaaggtaaa 41984476  T
Q  272 gttggaagagaaaacttaaagttgtattggaaatataaag 311  Q
    ||||||||| |||| |||||||||||||| |||| |||||    
T  41984475 gttggaagaaaaaaattaaagttgtattgaaaatgtaaag 41984436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 100 - 246
Target Start/End: Original strand, 14378167 - 14378318
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-gaa----atgaaataatcattggatatgacgcttttactaaactgtccttact 194  Q
    |||||||||||||||||||||||||||    | |||||||| |||| |||    ||||||||||||||  |||| || |||||||||||||| |||||||    
T  14378167 tccgttttaaaatgagtgtcgctttagctaattgcacacagtttaatgaatagaatgaaataatcatttaatataacacttttactaaactgcccttact 14378266  T
Q  195 ttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||| |||||| ||| |||||||||||||||||||||||||||||||||    
T  14378267 ttataagaaaaagataaatttaaagttgcattgaaaattatgcgagagaaaa 14378318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 188 - 328
Target Start/End: Complemental strand, 2459915 - 2459774
Alignment:
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
    ||||| |||||||| | | |||||| |||||||||||||||||||| || |||||| |||||||| |||||||||| | ||||||||||||||| ||||     
T  2459915 ccttattttataagaataggacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaa 2459816  T
Q  287 ttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||||| ||||||||| |||||  |||||||||||||||    
T  2459815 ttaaagttgcattggaaatgtaaagcgacattcattttaaaa 2459774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 148 - 305
Target Start/End: Complemental strand, 37107044 - 37106886
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaa--ttaaagttgcattgaaaattatgcgagagaaa 245  Q
    ||||||||||| ||| || |  || ||||||||||| || |||||||||||||| |||| | ||||  |||||||||||||||||||| || ||||||||    
T  37107044 aatgaaataattatttgacacaacacttttactaaattgcccttactttataagcaaaaaagaaaaacttaaagttgcattgaaaattgtgtgagagaaa 37106945  T
Q  246 aagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaat 305  Q
    | |||| |||||||||||| ||||||||||||||| |||| |||||||||||||| ||||    
T  37106944 a-gttggagtatttattaagggtaaagttggaagaaaaaaattaaagttgtattgaaaat 37106886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 93 - 324
Target Start/End: Original strand, 43388569 - 43388804
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa-----tcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||| ||||||||||||||||||| |  | ||||||||||||||||||  |||||     |||   |  || ||  |||||||||| |      
T  43388569 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataa 43388668  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
    |||||||||||||| |||| ||||| ||||||||| ||||||||||||| ||||| |||||||  |||||||||| | ||||||||||||||| |||| |    
T  43388669 ccttactttataagaaaaatacaaacttaaagttgtattgaaaattatgtgagag-aaaagtttgagtatttattgagggtaaagttggaagaaaaaaat 43388767  T
Q  288 taaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| |||| |||| |||||  |||||||||||    
T  43388768 taaagttgcattgaaaatgtaaagcgacattcatttt 43388804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 104 - 324
Target Start/End: Original strand, 36360298 - 36360520
Alignment:
Q  104 ttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttat 198  Q
    ||||||||||||||||||||||| |  | |||| || |||||     ||||||||||||||||| || || || |||||||||||||| ||||| |||||    
T  36360298 ttttaaaatgagtgtcgctttagtcaattgcacgcaaattaaagaatgaaatgaaataatcattagacataacacttttactaaactgcccttattttat 36360397  T
Q  199 aaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtat 298  Q
    ||| |||||| ||| ||||||||| |||||||||| || |||   |||||||  ||||| |||| | |||||||||| |||| |||| ||||||||||||    
T  36360398 aagaaaaagataaacttaaagttgtattgaaaattgtgtgag---aaaagtttgagtatatattgagggtaaagttgaaagaaaaaaattaaagttgtat 36360494  T
Q  299 tggaaatataaagtaacattcatttt 324  Q
    || ||||  ||||| | |||||||||    
T  36360495 tgaaaatgcaaagtgatattcatttt 36360520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 174 - 331
Target Start/End: Original strand, 39866669 - 39866827
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaag-ttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||| ||| ||| |||||| ||||||||| |||||||||| || ||||||||||  ||  |||||||||| |||||||||    
T  39866669 ttttactaaaataaccttactttacaagaaaatgacaaacttaaagttgtattgaaaattgtgtgagagaaaaaaatttgagtatttattgaaggtaaag 39866768  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |||||||| |||| ||||| ||| ||||||||| |||||  ||||||||||||||||||    
T  39866769 ttggaagaaaaaaattaaatttgcattggaaatgtaaagcgacattcattttaaaataa 39866827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 189 - 324
Target Start/End: Original strand, 10580869 - 10581005
Alignment:
Q  189 cttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
    ||||||||||||| | |||||||  ||||||||| |||||||||| || |||||| |||||||  |||||||||| | ||||||||||||||| |||| |    
T  10580869 cttactttataagaacaagacaatcttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaat 10580968  T
Q  288 taaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||||||||| ||||||||||| | |||||||||    
T  10580969 taaagttgtattgaaaatataaagtgatattcatttt 10581005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 98 - 246
Target Start/End: Complemental strand, 34225985 - 34225832
Alignment:
Q  98 catccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaactgtcctta 192  Q
    ||||||||| ||||||||||||||||||| |  | ||||| ||||||||     |||||||||||||||| || || |   |||||||||| || |||||    
T  34225985 catccgtttcaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaatgaaataatcattagacataataattttactaaattgccctta 34225886  T
Q  193 ctttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||||| |||||||||| |||||||||||||||||||| || |||||||||    
T  34225885 ctttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 34225832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 324
Target Start/End: Original strand, 29795171 - 29795337
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa 247  Q
    ||||||||||||||| || || |  |||||||||||||| ||||| |||||||| |||||||||  |||||||||||||||||||| || || || ||||    
T  29795171 aatgaaataatcattagacataatacttttactaaactgcccttattttataagaaaaagacaactttaaagttgcattgaaaattgtgtgaaag-aaaa 29795269  T
Q  248 gttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||| ||         | ||||||||||||||| |||| ||||||||||||||||||| |||||| |||||||||||    
T  29795270 gttggag---------agggtaaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 29795337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 151 - 328
Target Start/End: Complemental strand, 1381916 - 1381751
Alignment:
Q  151 gaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagtt 250  Q
    |||||||||||| || || || ||||||||||||||  ||||||||||||| |||||| ||| ||||| |||||||||||||| || ||||   ||||||    
T  1381916 gaaataatcattagacataacacttttactaaactgctcttactttataagaaaaagaaaaacttaaaattgcattgaaaattgtgagaga---aaagtt 1381820  T
Q  251 gaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    | ||         ||||||||||||||||| |||| | |||||| |||||||||| ||||||||||||||||||||||    
T  1381819 ggag---------aaggtaaagttggaagaaaaaaatcaaagttatattggaaatgtaaagtaacattcattttaaaa 1381751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 203 - 324
Target Start/End: Complemental strand, 1360302 - 1360182
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||| |||||||||||||||||||| |   |||||||| ||||||||||||||| | |||||| |||| ||| |||| ||||||||||||||||    
T  1360302 aaaagacaaacttaaagttgcattgaaaattgtttaagagaaaa-gttgaagtatttattgagggtaaaattgggagaaaaaaattaaagttgtattgga 1360204  T
Q  303 aatataaagtaacattcatttt 324  Q
    |||  ||||| |||||||||||    
T  1360203 aatgcaaagtgacattcatttt 1360182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 188 - 324
Target Start/End: Complemental strand, 33093510 - 33093373
Alignment:
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
    |||||||||||||    |||| ||| |||||||||||||||||||| || ||| || |||||||| | |||||||| | ||||||||||||||| ||||     
T  33093510 ccttactttataacatcaagataaacttaaagttgcattgaaaattgtgtgagggagaaaagttggaatatttattgagggtaaagttggaagaaaaaaa 33093411  T
Q  287 ttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||||| |||| |||||| |||||||||||    
T  33093410 ttaaagttgtattgaaaatgtaaagtgacattcatttt 33093373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 324
Target Start/End: Complemental strand, 4536696 - 4536579
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||| |||||||||||||||||||| || ||||    |||||  ||||||| || | ||||||||||| ||| |||| ||||||||||||||||    
T  4536696 aaaagacaaatttaaagttgcattgaaaattgtgtgaga----aagttagagtatttgttgagggtaaagttgggagaaaaaaattaaagttgtattgga 4536601  T
Q  303 aatataaagtaacattcatttt 324  Q
    ||| |||||| |||||||||||    
T  4536600 aatgtaaagtgacattcatttt 4536579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 305
Target Start/End: Complemental strand, 25332726 - 25332595
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| |||||||||| ||| ||||| |||||||||| |  |||||| |||||||| |||||||||| | | |||||    
T  25332726 ttttactaaaataaccttactttataagaaaaagacaaacttagagttgtattgaaaattgtatgagagagaaaagttggagtatttattgaggataaag 25332627  T
Q  273 ttggaagagaaaacttaaagttgtattggaaat 305  Q
    |||||||| |||| ||||||||| |||||||||    
T  25332626 ttggaaga-aaaaattaaagttgcattggaaat 25332595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 775882 - 776032
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgaga-gaaaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  ||||| |||||||| |||||||||| |||||||||||||||||||| || | || | |||||||  |||||||||| | |||||||    
T  775882 ttttactaaaataaccttaatttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgggagggaaaagttagagtatttattgagggtaaag 775981  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    || ||||| |||| ||||||||| |||| |||| |||||  |||||||||||    
T  775982 ttagaaga-aaaaattaaagttgcattgaaaatgtaaagcgacattcatttt 776032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 174 - 331
Target Start/End: Original strand, 4566119 - 4566277
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  ||||| |||||||| |||||| ||| |||||||||||||||||||| || |||||| |||||||| | | |||||| | | |||||    
T  4566119 ttttactaaaataaccttattttataagaaaaagataaatttaaagttgcattgaaaattgtgtgagagagaaaagttggactctttattgatgataaag 4566218  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    ||| || | |||| |||||||||||||  |||| |||||| ||||  ||||||||||||    
T  4566219 ttgaaaaaaaaaaattaaagttgtattaaaaatgtaaagtgacatatattttaaaataa 4566277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 204 - 324
Target Start/End: Original strand, 18374792 - 18374911
Alignment:
Q  204 aaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaa 303  Q
    ||||||||  ||||| ||| |||||||||| || || ||||||||||  |||||||||| | ||||||||||||||| |||| ||||| || ||||||||    
T  18374792 aaagacaagtttaaaattgtattgaaaattgtgaga-agaaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaaattatattggaa 18374890  T
Q  304 atataaagtaacattcatttt 324  Q
    || |||||| |||||||||||    
T  18374891 atgtaaagtgacattcatttt 18374911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 203 - 328
Target Start/End: Complemental strand, 6592090 - 6591966
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaac-ttaaagttgtattgg 301  Q
    |||||||||| ||||||| |||||||||||||||| |||||||| |||| |||||| ||| || | |||||||| ||| ||||  |||||||||||||||    
T  6592090 aaaagacaaacttaaagt-gcattgaaaattatgcaagagaaaa-gttggagtattcattgaaaggaaagttgggagaaaaaaaattaaagttgtattgg 6591993  T
Q  302 aaatataaagtaacattcattttaaaa 328  Q
    |||| |||| | | |||||||||||||    
T  6591992 aaatgtaaaatgatattcattttaaaa 6591966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 278
Target Start/End: Complemental strand, 11171919 - 11171792
Alignment:
Q  152 aaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagtt 250  Q
    ||||||||| | || || || ||||||||||| | |||| |||||||  | |||||||||| |||||||| ||||| ||||  || || ||| |||| ||    
T  11171919 aaataatcaatagacataacacttttactaaattatcctaactttatgcgaaaaagacaaacttaaagttacattggaaatagtgagaaagagaaaaatt 11171820  T
Q  251 gaagtatttattaaaggtaaagttggaa 278  Q
    |||||||||||||| |||||||||||||    
T  11171819 gaagtatttattaatggtaaagttggaa 11171792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 14378316 - 14378377
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaata 330  Q
    |||||||| ||| |||| |||||||||||||| |||| |||||| |||||||||||||||||    
T  14378316 aaagttgggagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaata 14378377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 91 - 126
Target Start/End: Original strand, 25383395 - 25383430
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||||||||||||||||||||||    
T  25383395 aatactccatccgttttaaaatgagtgtcgctttag 25383430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 14698144 - 14698066
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttg 251  Q
    |||||||||| |  |||||||||||||| |||| ||||| ||||||||| |||||||||| || |||||| ||||||||    
T  14698144 ttttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttg 14698066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 5717468 - 5717501
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||||||||||||||||||||    
T  5717468 tactccatccgttttaaaatgagtgtcgctttag 5717501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 16792439 - 16792472
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||||||||||||||||||||    
T  16792439 tactccatccgttttaaaatgagtgtcgctttag 16792472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 32228213 - 32228176
Alignment:
Q  89 ttaatactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||||||||||||||| |||||    
T  32228213 ttaatactccatccgttttaaaatgagtgtcgttttag 32228176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 681679 - 681743
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||| ||||||| ||||||||||||| || ||| ||| ||||||| ||||||||||| |||||    
T  681679 tactccctccgtttcaaaatgagtgtcgtttaaggtttttgcacacatattaagaaatgcaataa 681743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 29809054 - 29808990
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||||| |||| ||||||||||||||||||| |  | ||||||| |||||| ||||||||||    
T  29809054 tactccatctgtttcaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaataa 29808990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 45081818 - 45081882
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||||||||||||||||||||||| |||||    | ||||||| |||||| ||||||||||    
T  45081818 tactccatccgttttaaaatgagtgtcgttttagaaaattgcacacatattaaggaatgaaataa 45081882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 4766280 - 4766335
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||| |||| |||||||||||||| |||| |||| | |||||||||||    
T  4766280 aaagttggaagaaaaaaattaaagttgtattgaaaatgtaaattgacattcatttt 4766335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 123
Target Start/End: Complemental strand, 983765 - 983735
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctt 123  Q
    |||||||||||||||||||||||||||||||    
T  983765 tactccatccgttttaaaatgagtgtcgctt 983735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 14698239 - 14698173
Alignment:
Q  84 attatttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat 150  Q
    ||||| || |||||| | ||||| ||||||||||||||||||| |  | ||||||||||||||||||    
T  14698239 attatatattactcccttcgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaat 14698173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 126
Target Start/End: Original strand, 37724200 - 37724234
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||| |||||||||||||||||||||||||||    
T  37724200 atactccctccgttttaaaatgagtgtcgctttag 37724234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 4840928 - 4840891
Alignment:
Q  89 ttaatactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  4840928 ttaatactccatccgtttcaaaatgagtgtcgttttag 4840891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 7029010 - 7028977
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgcttta 125  Q
    ||||||||||||||||||||||||||||| ||||    
T  7029010 atactccatccgttttaaaatgagtgtcgattta 7028977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 324
Target Start/End: Complemental strand, 14511585 - 14511465
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||| |||||||| ||||||||||| ||| | || |||||||  |||||||||| | | ||||||| | ||  |||| |||| ||||||||  |    
T  14511585 aaaagacaaatttaaagttacattgaaaattgtgcaaaag-aaaagttagagtatttattgaggataaagtttggaggaaaaaattaatgttgtattcaa 14511487  T
Q  303 aatataaagtaacattcatttt 324  Q
    ||| |||||  |||||||||||    
T  14511486 aatgtaaagagacattcatttt 14511465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 16807429 - 16807462
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||| |||||||||||||||||||||||||||    
T  16807429 tactccctccgttttaaaatgagtgtcgctttag 16807462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 16846710 - 16846743
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||| |||||||||||||||||||||||||||    
T  16846710 tactccctccgttttaaaatgagtgtcgctttag 16846743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 25332812 - 25332755
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat 150  Q
    |||||| |||||||||||||||||||||||||||    | |||||||||||||| |||    
T  25332812 tactccctccgttttaaaatgagtgtcgctttagctaattgcacacagattaaggaat 25332755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 35799459 - 35799398
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg 151  Q
    ||||||||| ||||||||||||||| ||||| ||||||  ||  |||||| |||||||||||    
T  35799459 taatactccctccgttttaaaatgaatgtcgttttaggtgtttacacacatattaagaaatg 35799398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 40987454 - 40987421
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||||||||||| |||||    
T  40987454 tactccatccgttttaaaatgagtgtcgttttag 40987421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 776081 - 776049
Alignment:
Q  94 actccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||| |||||||||||||||||||    
T  776081 actccatccgtttcaaaatgagtgtcgctttag 776049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 2459720 - 2459760
Alignment:
Q  86 tatttaatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||| ||||||| ||||||||||||||||||| |||||||    
T  2459720 tattttatactccctccgttttaaaatgagtgttgctttag 2459760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 4133263 - 4133199
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||| ||||||| ||||||||||||||||||| |  | ||||||| |||||| |||| |||||    
T  4133263 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataa 4133199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 8774293 - 8774229
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||||||||||||||||||||| | ||||| |  | ||||||| |||||| |||| |||||    
T  8774293 tactccatccgttttaaaatgagtgttgttttagtcaattgcacacatattaaggaatgtaataa 8774229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 8789342 - 8789406
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||||||||| ||||||||||| | ||||| |  | ||||||| |||||| ||||||||||    
T  8789342 tactccatccgtttaaaaatgagtgttgttttagacaattgcacacatattaaggaatgaaataa 8789406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 29396592 - 29396656
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||| || |||| ||||||||||||| ||||| |  | |||||||||||||| ||||||||||    
T  29396592 tactccctctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaataa 29396656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 33093609 - 33093545
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||| |||||| |||||||| ||||||||| |  | | |||| ||||||||||||||||||    
T  33093609 tactccattcgttttcaaatgagtatcgctttagccaattgtacacggattaagaaatgaaataa 33093545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 34225834 - 34225778
Alignment:
Q  269 aaagttggaagagaaaac-ttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||| ||||  |||||||||||||| |||| |||||| |||||||||||    
T  34225834 aaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 34225778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 2e-59; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 108 - 323
Target Start/End: Complemental strand, 52403701 - 52403482
Alignment:
Q  108 aaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaaactgtccttactttataagg 202  Q
    ||||||| ||||||||||||||||| || |||||||||||||||     ||||||||||||||||| || || ||| ||||||| |||||||||||||||    
T  52403701 aaaatgaatgtcgctttaggctttgacatacagattaagaaatggaatgaaataatcattggatataacactgttattaaactgcccttactttataagg 52403602  T
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||||||||||||||| ||||||||||| ||||| | |||||  |||||||||| | ||||||||||||| ||||||||||||||||||||| |    
T  52403601 aaaagacaaaattaaagttgcactgaaaattatgtgagag-agaagtttgagtatttattgagggtaaagttggaatagaaaacttaaagttgtattgaa 52403503  T
Q  303 aatataaagtaacattcattt 323  Q
    ||| |||||| ||||||||||    
T  52403502 aatttaaagtgacattcattt 52403482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 93 - 331
Target Start/End: Original strand, 28751320 - 28751563
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaat-----aatcattggatatgacgcttttactaaactgt 187  Q
    |||||| || |||| ||||||||||||| ||||| |  | |||||||||||||| ||||||||     ||||||| || || ||  |||||||||||||     
T  28751320 tactccctctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaataaaataatcattagacataacatttttactaaactgc 28751419  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
    |||||||||||||| ||| |||||| |||||||| ||||||||||| |||||||| |||||||  |||||||||| | ||||||||||||||| |||| |    
T  28751420 ccttactttataagaaaaggacaaacttaaagttacattgaaaattgtgcgagag-aaaagtttgagtatttattgagggtaaagttggaagaaaaaaat 28751518  T
Q  288 taaagttgtattggaaatataaagtaaca-ttcattttaaaataa 331  Q
    ||||||||||||| |||| |||||| ||| |||||||| ||||||    
T  28751519 taaagttgtattgaaaatgtaaagtgacatttcattttgaaataa 28751563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 100 - 324
Target Start/End: Original strand, 5317496 - 5317724
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactg-tccttac 193  Q
    ||||||||||||||||||||| |||||||  | | ||| |||||||     ||||||||||||||||| || || || ||||||||||| ||  |||||     
T  5317496 tccgttttaaaatgagtgtcgttttaggcaatagtacatagattaaggaatgaaatgaaataatcattagacataacacttttactaaattgccccttat 5317595  T
Q  194 tttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagt 293  Q
    |||||||| |||||||||| |||||||||||||||||||| || ||||| |||||||| |||||||||| | ||||||||||||||| |||| |||||||    
T  5317596 tttataagaaaaagacaaacttaaagttgcattgaaaattgtg-gagag-aaaagttgtagtatttattgagggtaaagttggaagaaaaaaattaaagt 5317693  T
Q  294 tgtattggaaatataaagtaacattcatttt 324  Q
    ||||||| || | |||||| |||||||||||    
T  5317694 tgtattgaaattgtaaagtgacattcatttt 5317724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 146 - 328
Target Start/End: Complemental strand, 12002428 - 12002247
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaa 245  Q
    ||||||||||||||||  || || |  |||||||||||||| ||||  |||||| | |||||||||| |||||||||||||||||||| || |||| |||    
T  12002428 gaaatgaaataatcatcagacataatacttttactaaactgcccttgttttatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgaga-aaa 12002330  T
Q  246 aagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||| |||||||||| ||||||||| ||||||| |||| ||||||||||||||||||| |||| | |||||||||||||||    
T  12002329 aagttggagtatttattgaaggtaaagctggaagaaaaaaattaaagttgtattggaaatgtaaaatgacattcattttaaaa 12002247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 189 - 331
Target Start/End: Original strand, 44582791 - 44582934
Alignment:
Q  189 cttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |||| | |||||||| |||||||||| | ||||||||||||||| |||| |    
T  44582791 cttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagatagaaaagttggagtatttattgagggtaaagttggaagaaaaaaat 44582890  T
Q  288 taaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |||||||||||||||||| |||||| ||||| ||||| ||||||    
T  44582891 taaagttgtattggaaatgtaaagtgacatttattttgaaataa 44582934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 174 - 324
Target Start/End: Complemental strand, 11650212 - 11650063
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    ||||||||||||| |||||||||| ||| |||||||||| |||||||||||||| ||||| || |||||||||| ||| |||||||||| | ||||||||    
T  11650212 ttttactaaactgcccttactttaaaagaaaaagacaaacttaaagttgcattggaaattgtgtgagagaaaaa-ttggagtatttattgagggtaaagt 11650114  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||| |||| |||||||||||||| |||| |||||| |||||||||||    
T  11650113 tggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 11650063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 93 - 247
Target Start/End: Original strand, 84430 - 84589
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaactgt 187  Q
    ||||||||| |||| ||||||||||||||||||| |  | ||||||||||||||      ||||||||||||||| || || || ||||||||||| |||    
T  84430 tactccatctgtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaattgaatgaaataatcattagacataacacttttactaaaatgt 84529  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa 247  Q
    |||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||    
T  84530 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaaa 84589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 95 - 328
Target Start/End: Complemental strand, 1429105 - 1428867
Alignment:
Q  95 ctccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttactaaactgtcc 189  Q
    |||| ||||||||||||||||||| | ||||||  ||| |||| | ||||||||||     |||||||| ||| ||||| || |||||||||||||| ||    
T  1429105 ctccctccgttttaaaatgagtgtggttttaggtgttgacacatatattaagaaattgaatgaaataattattagatataacacttttactaaactgccc 1429006  T
Q  190 tt-actttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaactt 288  Q
    || |||||||||| ||| |||||| ||||||||| |||| ||||| || |||||||||  |||| ||||||||| | |||||||||| |||| |||| ||    
T  1429005 tttactttataagaaaaggacaaacttaaagttgaattggaaattgtgtgagagaaaagtttga-gtatttattgagggtaaagttgcaagaaaaaaatt 1428907  T
Q  289 aaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
     |||||||||| ||||| |||||| |||||||||||||||    
T  1428906 taagttgtattagaaatgtaaagtgacattcattttaaaa 1428867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 174 - 328
Target Start/End: Original strand, 42650247 - 42650401
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    |||||||||| |  ||||| |||||||| |||||||||| ||||| |||||||||||||| || |||||||||||||||||||||| || |||||||||     
T  42650247 ttttactaaaataaccttagtttataagaaaaagacaaacttaaaattgcattgaaaattgtgtgagagaaaaagttgaagtatttcttgaaggtaaagc 42650346  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||| |||| ||||||||||||| ||||| |||||  ||||| |||||||||    
T  42650347 tggaagaaaaaaattaaagttgtattagaaatgtaaagcgacatttattttaaaa 42650401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 96 - 330
Target Start/End: Original strand, 17919736 - 17919973
Alignment:
Q  96 tccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactgtcct 190  Q
    |||| |||||| ||||||||||||||||||| |  |  || |||||||||     |||||||||||||||||  | || || |||||||||||||| |||    
T  17919736 tccacccgtttcaaaatgagtgtcgctttagccaattacatacagattaatgaatgaaatgaaataatcatta-acataacacttttactaaactgccct 17919834  T
Q  191 tactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaa 290  Q
    |  ||||||   |||||||||| |||||||||||||||||||| || |||| ||||||||  ||||| |||| | ||||||||||||||| |||| ||||    
T  17919835 tgttttatattaaaaagacaaacttaaagttgcattgaaaattgtgtgaga-aaaaagttagagtatatattgagggtaaagttggaagaaaaaaattaa 17919933  T
Q  291 agttgtattggaaatataaagtaacattcattttaaaata 330  Q
    ||||||||||||||| |||||| | ||||||||| |||||    
T  17919934 agttgtattggaaatgtaaagtgatattcattttgaaata 17919973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 174 - 324
Target Start/End: Complemental strand, 26252274 - 26252123
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa-gttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  ||||| |||||||| | |||||||| |||||||||||||||||||| || |||||||||| |||  |||||||||||| |||||||    
T  26252274 ttttactaaaataaccttattttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaagttagagtatttattaagggtaaag 26252175  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| |||| || |||||||||||||||| |||||| |||||||||||    
T  26252174 ttggaagaaaaaaatttaagttgtattggaaatgtaaagtgacattcatttt 26252123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 191 - 328
Target Start/End: Original strand, 15698766 - 15698902
Alignment:
Q  191 tactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaa 290  Q
    ||||||||||| |||||| ||| ||||||||  ||||||||||||| |||||||||  |||| ||||||||| |  ||||||||||||||  ||| ||||    
T  15698766 tactttataagaaaaagataaacttaaagttctattgaaaattatgtgagagaaaagtttga-gtatttattgagagtaaagttggaagaagaaaattaa 15698864  T
Q  291 agttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||||||||||||||||| |||||||||||||||    
T  15698865 agttgtattggaaatataaagtgacattcattttaaaa 15698902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 89 - 246
Target Start/End: Original strand, 24040932 - 24041094
Alignment:
Q  89 ttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaaa 183  Q
    |||||||||| | ||||||||||||||||||||||||| |  |  ||||  ||||||| ||||     ||||||||||| || || || |||||||||||    
T  24040932 ttaatactccctacgttttaaaatgagtgtcgctttagccaatttcacatggattaaggaatggaatgaaataatcattagacataacacttttactaaa 24041031  T
Q  184 ctgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||| |||||||||||||| |||||||||| |||||||||||||||||||| || |||||||||    
T  24041032 ctgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 24041094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 174 - 326
Target Start/End: Complemental strand, 2245942 - 2245789
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    ||||||||||||||| || ||||||||| |||||||||| |||||| ||||||||||||| ||  ||||| |||||||  |||||||||| | |||||||    
T  2245942 ttttactaaactgtcattcctttataagaaaaagacaaacttaaagatgcattgaaaattgtgaaagagagaaaagtttgagtatttattgagggtaaag 2245843  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaa 326  Q
    ||| |||| |||  |||||||||||||| |||| ||| || |||||||||||||    
T  2245842 ttgaaagaaaaagattaaagttgtattgaaaatgtaaggtgacattcattttaa 2245789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 93 - 304
Target Start/End: Original strand, 28200134 - 28200351
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa-----tcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||||||||||||||||||||||| |  | ||||||||||||||||||  |||||     |||   |  ||  |  |||||||||| |      
T  28200134 tactccttccgttttaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagttgtcaaatgtcatagcaattttactaaaataa 28200233  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
    |||||||||||||| |||| ||||| ||||||||| |||||||||| ||||||||| |||||||| |||||||||| | ||||||||||||||| ||||     
T  28200234 ccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgcgagagagaaaagttggagtatttattgagggtaaagttggaagaaaaaaa 28200333  T
Q  287 ttaaagttgtattggaaa 304  Q
    ||||||||| ||| ||||    
T  28200334 ttaaagttgcatttgaaa 28200351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 254909 - 255061
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  || ||||||||||| |||||||||| |||||||||||||||||||| || ||| || |||||||| |||||||||| | |||||||    
T  254909 ttttactaaaataaccctactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagtgagaaaagttggagtatttattgagggtaaag 255008  T
Q  273 ttggaag-agaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||| | |||| ||||||||| ||||||||| |||||  |||||||||||    
T  255009 ttggaagaaaaaaaattaaagttgcattggaaatgtaaagcgacattcatttt 255061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 92 - 246
Target Start/End: Original strand, 1430447 - 1430607
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaaga-----aatgaaataatcattggatatgacgcttttactaaactg 186  Q
    ||||||| ||| ||||||||||||||||| ||||||  ||||||||||||||||||     ||||||||||| ||| ||||| || ||||||||||||||    
T  1430447 atactccctccattttaaaatgagtgtcgttttaggtgttggcacacagattaagaaatttaatgaaataataattagatataacacttttactaaactg 1430546  T
Q  187 -tccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
      | |||||||||||| |||||||||| |||||||||||||| ||||| || | |||||||    
T  1430547 cactttactttataagaaaaagacaaacttaaagttgcattggaaattgtgtgtgagaaaa 1430607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 98 - 329
Target Start/End: Complemental strand, 40719250 - 40719015
Alignment:
Q  98 catccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaactgtcctta 192  Q
    |||||||||| |||||||||||| ||||| |  | |||||||  |||||     |||||||||||||||| || || ||  ||||||||||||| | ||     
T  40719250 catccgttttgaaatgagtgtcgttttagccaattgcacacaagttaaggaatgaaatgaaataatcattagacatcacatttttactaaactgccattg 40719151  T
Q  193 ctttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaag 292  Q
     |||||| | |||||| ||| ||||||||| ||||| |||| ||  ||| ||||||||| |||||||||| ||||||||||||||||| |||| ||||||    
T  40719150 ttttatatgaaaaagataaatttaaagttgtattgagaattgtgtaaga-aaaaagttggagtatttattgaaggtaaagttggaagaaaaaaattaaag 40719052  T
Q  293 ttgtattggaaatataaagtaacattcattttaaaat 329  Q
    |||||||  |||| |||| | ||||||||||| ||||    
T  40719051 ttgtattaaaaatgtaaattgacattcatttttaaat 40719015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 331
Target Start/End: Original strand, 50158224 - 50158461
Alignment:
Q  87 atttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttacta 181  Q
    ||||| |||||| ||||||| |||||||||||| |||||||||||| |||| ||||||||||||     | |||||||||||||||| || |||||||||    
T  50158224 atttattactccctccgtttcaaaatgagtgtcactttaggctttgacacatagattaagaaatataatgcaataatcattggatataacacttttacta 50158323  T
Q  182 aactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaag-a 280  Q
    ||||  |||| ||||||           ||||||||||||||||| |||||| || ||||| |||||||| || |||| || | | |||||||||||| |    
T  50158324 aacttcccttgctttat-----------aaaattaaagttgcatt-aaaattgtgtgagag-aaaagttggagaattttttgaggttaaagttggaagaa 50158410  T
Q  281 gaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
     |||| |||||||||||||| |||| |||||| ||||||||||| ||||||    
T  50158411 aaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaataa 50158461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 193 - 328
Target Start/End: Original strand, 17806392 - 17806526
Alignment:
Q  193 ctttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaag 292  Q
    ||||||||| |||||||||| ||||| |||||||||||||| |  ||||||||| |||| |||||||||| |||||||| |||||||  |||| ||||||    
T  17806392 ctttataagaaaaagacaaacttaaaattgcattgaaaattgtatgagagaaaa-gttggagtatttattgaaggtaaaattggaagtaaaaaattaaag 17806490  T
Q  293 ttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||||||||| |||||  ||| |||||||||||    
T  17806491 ttgtattggaaatgtaaagcgacactcattttaaaa 17806526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 92 - 328
Target Start/End: Complemental strand, 44584009 - 44583773
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa-----tcattggatatgacgcttttactaaactg 186  Q
    |||||||||| |||| | |||||||||||   |||| |||| |||||| |||||||||||||||||     ||||| || || ||  |||| ||||||||    
T  44584009 atactccatctgtttcacaatgagtgtcg---taggttttgacacacaaattaagaaatgaaataaaataatcattagacataacaattttcctaaactg 44583913  T
Q  187 tccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
     ||||| |||||||| |||||||||| |||| ||||||||||||| |||| || |||||| |||  |||| ||||||| ||||||||  ||||| ||||     
T  44583912 -ccttattttataagaaaaagacaaacttaatgttgcattgaaaactatgtgaaagaaaa-gttagagtacttattaagggtaaagtcagaagaaaaaaa 44583815  T
Q  287 ttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||||||||  |||| ||| || |||||||||||||||    
T  44583814 ttaaagttgtattaaaaatgtaaggtgacattcattttaaaa 44583773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 108 - 328
Target Start/End: Complemental strand, 6332392 - 6332167
Alignment:
Q  108 aaaatgagtgtcgctttaggctttggcacacagattaaga-----aatgaaataatcattggatatgacgcttttactaaactgtccttactttataagg 202  Q
    ||||||||||||||||||  |  | ||||||| |||||||     ||||||||||||||| || || || |||||||||||||| | ||  |||||| |     
T  6332392 aaaatgagtgtcgctttaaccaattgcacacaaattaagaaattgaatgaaataatcattagacataacacttttactaaactgcctttgttttatatga 6332293  T
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaag-agaaaacttaaagttgtattgg 301  Q
    ||||||||||  ||||||| ||||||||||| || |||| ||||||||| ||||||||||||  ||||||||| ||| | |||| |||||||||| ||      
T  6332292 aaaagacaaacataaagttacattgaaaattgtgtgaga-aaaaagttggagtatttattaagagtaaagttgaaagaaaaaaaattaaagttgtgttaa 6332194  T
Q  302 aaatataaagtaacattcattttaaaa 328  Q
    |||| |||||| |||||||||||||||    
T  6332193 aaatgtaaagtgacattcattttaaaa 6332167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 203 - 329
Target Start/End: Original strand, 45377177 - 45377302
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||| |||||||| ||||||||||| |||||||||||| |||| ||||| |||| | ||||||||||| ||| ||||  |||||||||||||||    
T  45377177 aaaagacaaacttaaagtttcattgaaaattgtgcgagagaaaa-gttggagtatctattgagggtaaagttgggagaaaaaaagtaaagttgtattgga 45377275  T
Q  303 aatataaagtaacattcattttaaaat 329  Q
    ||| |||||| ||||||||||| ||||    
T  45377276 aatgtaaagtgacattcattttgaaat 45377302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 88 - 324
Target Start/End: Original strand, 48259770 - 48260001
Alignment:
Q  88 tttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaa 182  Q
    |||| |||||| ||||||| ||||||||||||| ||||| |  | ||||||||||||||      |||||||||||| || || || || |||||| |||    
T  48259770 tttattactccctccgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatagaatgaaataatcgttagacataacacttttattaa 48259869  T
Q  183 actgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagaga 282  Q
    |||| |||| ||||||||| |||||| ||| |||||||||||||||||||| || || ||||||  ||||           | ||||||||||||||| |    
T  48259870 actgcccttgctttataagaaaaagataaacttaaagttgcattgaaaattgtgtgaaagaaaagtttga----------gagggtaaagttggaagaaa 48259959  T
Q  283 aaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||| ||||||||||||||||||| |||||| |||||||||||    
T  48259960 aaaattaaagttgtattggaaatgtaaagtgacattcatttt 48260001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 148 - 304
Target Start/End: Complemental strand, 43929864 - 43929710
Alignment:
Q  148 aatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa 247  Q
    ||||||||||||||| || || || ||||||||| |||  | |||||||||||| ||||||| || ||||||||| || |||||||||| |||||||||     
T  43929864 aatgaaataatcattagacataacacttttactatacttccattactttataagaaaaagactaacttaaagttgtatcgaaaattatgtgagagaaaa- 43929766  T
Q  248 gttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaa 304  Q
      || |||||||||| | ||||||||||||||  |||| ||||||||||||||||||    
T  43929765 -gtggagtatttattgagggtaaagttggaaggaaaaaattaaagttgtattggaaa 43929710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 174 - 324
Target Start/End: Complemental strand, 22665091 - 22664944
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    ||||||||||||  |||||||||||||| | |||||||| ||||||||| ||| |||||| || |||||||   |||| |||||||||| | ||||||||    
T  22665091 ttttactaaactaaccttactttataagaacaagacaaacttaaagttgaattaaaaattgtgagagagaa---gttggagtatttattgagggtaaagt 22664995  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||| |  | |||| |||||||||||||| |||||| |||||||||||    
T  22664994 tggaagaaattaattaacgttgtattggaaatgtaaagtgacattcatttt 22664944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 324
Target Start/End: Complemental strand, 44024701 - 44024550
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  ||||| |||||| ||| |||||||| ||||||||  |||||||||| || |||||| ||||||||||||||||||| | |||||||    
T  44024701 ttttactaaaataaccttattttatagggacaagacaaacttaaagttaaattgaaaattgtgtgagagagaaaagttgaagtatttattgagggtaaag 44024602  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| |||| ||||||||| |||| |||| |||||   ||||||||||    
T  44024601 ttggaagaaaaaaattaaagttgcattgaaaatgtaaagcggcattcatttt 44024550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 92 - 324
Target Start/End: Complemental strand, 2459247 - 2459013
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa-----tcattggatatgacgcttttactaaactg 186  Q
    ||||||| ||||||| ||||||||||||||||||| |  | |||||||||||||||||| |||| |     |||   |  || ||  |||||||||| |     
T  2459247 atactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattaaatgaagtagtcaaatgtcataacaattttactaaaata 2459148  T
Q  187 tccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
     |||||||||||||| |||| ||||| ||||||||| |||||||||| || ||||   ||||||  ||||||| || | ||||||||||||||| ||||     
T  2459147 accttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgagaga---aaagtttgagtatttgttgagggtaaagttggaagaaaaaaa 2459051  T
Q  287 ttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||||| |||| |||| |||||  |||||||||||    
T  2459050 ttaaagttgcattgaaaatgtaaagcgacattcatttt 2459013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 100 - 246
Target Start/End: Original strand, 10690874 - 10691025
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaa-----tgaaataatcattggatatgacgcttttactaaactgtccttact 194  Q
    ||||||||| ||||||||||| || ||| |||| |||||| |||||||||     ||||||||||||| ||||| ||  |||||||||||||  ||||||    
T  10690874 tccgttttacaatgagtgtcgtttaaggttttgccacacatattaagaaatgaaatgaaataatcattagatataacatttttactaaactgcacttact 10690973  T
Q  195 ttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |  |||| |||||||||| |||||||||||||||||||| || |||| ||||    
T  10690974 tcgtaagaaaaagacaaacttaaagttgcattgaaaattgtgtgagataaaa 10691025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 96 - 247
Target Start/End: Original strand, 37437319 - 37437475
Alignment:
Q  96 tccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgctttt-actaaactgtcc 189  Q
    ||||||||||| ||| ||||||||||||||| |  | ||||||| ||||||     |||||||||| ||||| || || || ||||| |||||| || ||    
T  37437319 tccatccgtttcaaa-tgagtgtcgctttagcccattgcacacatattaaggaatgaaatgaaatattcattagacataacactttttactaaattgccc 37437417  T
Q  190 ttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa 247  Q
    |||||||||||| |||||||||| |||||||||||||||||||| || ||||||||||    
T  37437418 ttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaa 37437475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 317
Target Start/End: Original strand, 50349764 - 50349996
Alignment:
Q  88 tttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaa 182  Q
    |||| |||||| ||||||| ||||||||||| ||||||| |  | | ||||| |||||| ||||     ||||||||||| || || || ||||||||||    
T  50349764 tttagtactccctccgtttcaaaatgagtgttgctttagccaattgaacacaaattaaggaatggaatgaaataatcattagacataacacttttactaa 50349863  T
Q  183 actgtccttactttataa------ggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttgg 276  Q
    |||| |||||||||||||      | |||||||||| |||||||||||||||||||| || ||||| |||||||  ||||||||||        || |||    
T  50349864 actgcccttactttataattataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagag-aaaagtttgagtatttatt-------gaggtgg 50349955  T
Q  277 aagagaaaacttaaagttgtattggaaatataaagtaacat 317  Q
    |||| |||| ||||||||||||||||||| |||||| ||||    
T  50349956 aagaaaaaaattaaagttgtattggaaatgtaaagtgacat 50349996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 100 - 331
Target Start/End: Original strand, 6377205 - 6377431
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaactgtccttact 194  Q
    ||||||||||||||||||||||||||| |  | ||||| | ||||||     |||||||||||||||| || || || ||||||||||| || ||         
T  6377205 tccgttttaaaatgagtgtcgctttagccaattgcacataaattaaggaatgaaatgaaataatcattagacataacacttttactaaattgccc----- 6377299  T
Q  195 ttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaac-ttaaagt 293  Q
        ||| |||||||||| |||||| || ||| ||||||||||||||  |||||||| |||||||||| ||| ||||||| | ||| ||||  ||||| |    
T  6377300 ----aagaaaaagacaaacttaaagctgtattaaaaattatgcgaga--aaaagttgtagtatttattgaagataaagttaggagaaaaaaaattaaaat 6377393  T
Q  294 tgtattggaaatataaagtaacattcattttaaaataa 331  Q
      ||||| |||| |||||||||||||||||||||||||    
T  6377394 gttattgaaaatgtaaagtaacattcattttaaaataa 6377431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 174 - 328
Target Start/End: Original strand, 43738252 - 43738405
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    ||||||||||||  | |||||||||||| |||||| |||  ||||||| | |||||||||  | || ||||||| |||||||||||||| |  |||||||    
T  43738252 ttttactaaactacctttactttataagaaaaagataaatataaagttactttgaaaattgcgtgaaagaaaaa-ttgaagtatttattgagagtaaagt 43738350  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    || |||| |||| || ||||||||||| |||| | |||| |||||||||||||||    
T  43738351 tgaaagaaaaaaatttaagttgtattgaaaatgtgaagtgacattcattttaaaa 43738405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 89 - 324
Target Start/End: Complemental strand, 12851976 - 12851746
Alignment:
Q  89 ttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa-----tcattggatatgacgcttttactaaa 183  Q
    |||||||||||||||||||||||| ||||||||||||| |  |  |||| |||||||| ||||||||||     ||||| | ||| || |||||| ||||    
T  12851976 ttaatactccatccgttttaaaataagtgtcgctttagccaattacacaaagattaaggaatgaaataaaataatcattaggtataacacttttaataaa 12851877  T
Q  184 ctgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaa 283  Q
     || ||         ||| |||||||||||||||||||||||| |||||| |  ||  |||||  |||| |||| |||| | ||||||||||| ||| ||    
T  12851876 atgccc---------aagaaaaagacaaaattaaagttgcattaaaaattgtatgaatgaaaagtttga-gtatatattgagggtaaagttgggagaaaa 12851787  T
Q  284 aacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    || |||||||| |||||||||| |||||| |||||||||||    
T  12851786 aaattaaagttctattggaaatgtaaagtgacattcatttt 12851746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 230
Target Start/End: Original strand, 48319924 - 48320055
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaat-aatcattggatatgacgcttttactaaactgtccttactttat 198  Q
    ||||||| ||||||||||||||||||| |  | ||||||| ||||||||||| ||| ||||||| || || |  ||||||||||| || |||||||||||    
T  48319924 tccgtttcaaaatgagtgtcgctttagccaattgcacacatattaagaaatggaatgaatcattagacataagacttttactaaattgcccttactttat 48320023  T
Q  199 aaggaaaagacaaaattaaagttgcattgaaa 230  Q
    ||   ||||||||| |||||||||||| ||||    
T  48320024 aaaagaaagacaaacttaaagttgcatcgaaa 48320055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 5854238 - 5854360
Alignment:
Q  190 ttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaactt 288  Q
    |||||||||||| |||||||||  |||| ||||||||||||||| || ||||   |||||||| |||||||||| | | ||||||||||| | |||| ||    
T  5854238 ttactttataagaaaaagacaaccttaaggttgcattgaaaattgtgtgagatcgaaaagttggagtatttattgaggataaagttggaataaaaaaatt 5854337  T
Q  289 aaagttgtattggaaatataaag 311  Q
    ||||||| ||||||||| |||||    
T  5854338 aaagttgcattggaaatgtaaag 5854360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 203 - 324
Target Start/End: Original strand, 15647091 - 15647208
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    ||||||||||| ||| |||| |||||||||||||| |||||||| |||| |||||||||||| |||||||||||  |||||||   ||| |||||||| |    
T  15647091 aaaagacaaaactaa-gttggattgaaaattatgcaagagaaaa-gttggagtatttattaagggtaaagttgg--gagaaaaaaaaaatttgtattgaa 15647186  T
Q  303 aatataaagtaacattcatttt 324  Q
    ||| |||||| |||||||||||    
T  15647187 aatgtaaagtgacattcatttt 15647208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 246
Target Start/End: Complemental strand, 30006363 - 30006212
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-gaa----atgaaataatcattggatatgacgcttttactaaactgtccttact 194  Q
    ||||||| ||||||| ||||||||||| |  | ||||||||||||| |||    |||||||||||||| || || || || |||||||| ||  ||||||    
T  30006363 tccgtttcaaaatgaatgtcgctttagtcaattgcacacagattaatgaattgaatgaaataatcattagacataacactattactaaattgctcttact 30006264  T
Q  195 ttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||| |||||| ||| |||||||||||||||||||| |  |||||||||    
T  30006263 ttataagaaaaagataaatttaaagttgcattgaaaattgtttgagagaaaa 30006212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 146 - 331
Target Start/End: Original strand, 40060876 - 40061051
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaa 245  Q
    ||||||||||||| ||| || || || ||||||||||| || |||||||||||||| |||||| ||  ||| |||||||||||||||| ||  |||| ||    
T  40060876 gaaatgaaataatgattagacataacacttttactaaattgcccttactttataagaaaaagataattttatagttgcattgaaaattttgtaagag-aa 40060974  T
Q  246 aagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |||||| ||         | ||||||||| ||| | |||| |||||||||||||| |||| |||||| ||||||||||| ||||||    
T  40060975 aagttggag---------agggtaaagtttgaaaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttgaaataa 40061051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 294
Target Start/End: Original strand, 672280 - 672397
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    |||||||||| |  |||||||| ||||| |||||||||| ||||| |||||||||||||| || ||||| |||||||  |||||||||| | ||||||||    
T  672280 ttttactaaaataaccttactt-ataagaaaaagacaaacttaaatttgcattgaaaattgtgtgagag-aaaagttagagtatttattgagggtaaagt 672377  T
Q  274 tggaagagaaaacttaaagtt 294  Q
    ||||||| |||| ||||||||    
T  672378 tggaaga-aaaaattaaagtt 672397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 11134458 - 11134608
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||  |  ||||||||| ||| |||||||||| ||||| || |||||| |||||||| |||||||||| | || ||||    
T  11134458 ttttactaaaatagccttactttatttgacaaagacaaacttatagttgcattggaaattgtgagagagagaaaagttggagtatttattgagggcaaag 11134557  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||| | | || ||||||||| |||| |||| |||||| |||||||||||    
T  11134558 ttggaa-aaagaaattaaagttgcattgaaaatgtaaagtgacattcatttt 11134608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 191 - 312
Target Start/End: Original strand, 35149394 - 35149516
Alignment:
Q  191 tactttataaggaaaagacaaaattaaagttgcattgaaaatta-tgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaac-tt 288  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||  ||  | | |||||||| || |||||||| |||||||| ||| |||| ||||  ||    
T  35149394 tactttataagaaaaagataaaattaaagttgcattgataatttgtgtaata-aaaaagtttaaatatttattgaaggtaaaattgaaagaaaaaaaatt 35149492  T
Q  289 aaagttgtattggaaatataaagt 312  Q
    ||||||||||||||||||||||||    
T  35149493 aaagttgtattggaaatataaagt 35149516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 93 - 231
Target Start/End: Original strand, 45749411 - 45749554
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||||||||||||||||||||||||||||||     | ||||||| ||||   ||||     ||||||||||| || || || |||||||||||| |     
T  45749411 tactccatccgttttaaaatgagtgtcgctttaactaattgcacacatattacataatggaataaaataatcattagacataacacttttactaaaccgc 45749510  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaa 231  Q
    |||||||||||||| |||||||||| ||||| || |||||||||    
T  45749511 ccttactttataagaaaaagacaaacttaaatttacattgaaaa 45749554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 84590 - 84645
Alignment:
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||| |||| ||||||||||||||||||| |||||| |||||||||||||||    
T  84590 ttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcattttaaaa 84645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 26582985 - 26582926
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||| ||||| |||| ||||||||||||||||||| |||||||||||| |||||||||    
T  26582985 aaagttcgaagaaaaaaattaaagttgtattggaaatgtaaagtaacatttattttaaaa 26582926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 38132260 - 38132315
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||| |||| ||||||||||||||||||| |||||| |||||||||||    
T  38132260 aaagttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 38132315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 246
Target Start/End: Original strand, 43105525 - 43105672
Alignment:
Q  104 ttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttactaaactgtccttactttat 198  Q
    ||||||||||| ||||| ||||| || | |||| || ||||||||||     |||||||||||| || || || ||||||||||| |  | ||| |||||    
T  43105525 ttttaaaatgaatgtcgttttagactattgcacgcatattaagaaattgaatgaaataatcattagacataacacttttactaaattaccattattttat 43105624  T
Q  199 aaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||| |||||||||| ||||| ||||||||||||||  | |||||||||    
T  43105625 aagaaaaagacaaacttaaaattgcattgaaaattgcgtgagagaaaa 43105672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 9552368 - 9552426
Alignment:
Q  189 cttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaa 247  Q
    ||||||||||||| | |||||||  ||||||||||||||||||||||| ||||||||||    
T  9552368 cttactttataagaacaagacaatcttaaagttgcattgaaaattatgtgagagaaaaa 9552426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 246
Target Start/End: Complemental strand, 43755260 - 43755110
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagatta-agaa----atgaaataatcattggatatgacgcttttactaaactgtccttact 194  Q
    ||||||||||||||||||||||||||| |  | |||||||||||| ||||    |||||||||| |||  | |  || |||||||||||  | |||||||    
T  43755260 tccgttttaaaatgagtgtcgctttagccaattgcacacagattacagaatggaatgaaataataattaaaaaa-acacttttactaaatcgcccttact 43755162  T
Q  195 ttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    | ||||| |||||||||| |||||||||  ||||||||| || |||||||||    
T  43755161 taataagaaaaagacaaacttaaagttgttttgaaaattgtgtgagagaaaa 43755110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 49894866 - 49894804
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |||||| ||||| |||| ||||||||||||||||||| |||| ||||||||||||| ||||||    
T  49894866 aaagttagaagaaaaaaattaaagttgtattggaaatgtaaaataacattcattttgaaataa 49894804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 49894936 - 49894864
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||||||||| |  |||||||||||||| | |||||||| |||||||| ||||||||||| || |||||||||    
T  49894936 ttttactaaaataaccttactttataagaataagacaaacttaaagttacattgaaaattgtgtgagagaaaa 49894864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 1430605 - 1430660
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||| |||| ||||||||||||| ||||| |||||| |||||||||||    
T  1430605 aaagttggaagaaaaaaattaaagttgtattagaaatgtaaagtgacattcatttt 1430660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 49426328 - 49426387
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg 151  Q
    ||||||||||||||| |||||||||||||||||||||  | ||||||| |||||| ||||    
T  49426328 atactccatccgtttcaaaatgagtgtcgctttaggcaattgcacacatattaaggaatg 49426387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 4471326 - 4471384
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataat 158  Q
    ||||||| ||||||||||||||||||| |  | ||| ||||||||||||||||||||||    
T  4471326 tccgtttcaaaatgagtgtcgctttagtcaattgcatacagattaagaaatgaaataat 4471384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Original strand, 26352002 - 26352060
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg 151  Q
    |||||||||||||||||||||||||||| ||||||  ||  |||||| |||||||||||    
T  26352002 tactccatccgttttaaaatgagtgtcgttttaggtgtttacacacatattaagaaatg 26352060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 49468619 - 49468685
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||| ||| ||| ||||||||||||||||||| |  | |||||||||||||| ||||||||||    
T  49468619 aatactccctccatttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaataa 49468685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 30686875 - 30686810
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataat 158  Q
    ||||||||| |||||||||||||||||| |||||    | ||||||||||||||||||| ||||||    
T  30686875 tactccatctgttttaaaatgagtgtcgttttagctaattgcacacagattaagaaatggaataat 30686810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 328
Target Start/End: Original strand, 48320081 - 48320141
Alignment:
Q  267 gtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||||| |||| |||| ||||| |||||||| ||||||||||||||||| |||||||||    
T  48320081 gtaaagttgaaagaaaaaa-ttaaatttgtattgaaaatataaagtaacatttattttaaaa 48320141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 13408246 - 13408310
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||| ||||||||||||||||||||| ||||| |  | ||||||| |||||||||| ||||||    
T  13408246 tactccctccgttttaaaatgagtgtcgttttagccaattgcacacaaattaagaaattaaataa 13408310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 17920022 - 17919986
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||| |||||||||||||||||||||||||||    
T  17920022 taatactccctccgttttaaaatgagtgtcgctttag 17919986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 50094178 - 50094214
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||||||||||||||||| |||||    
T  50094178 taatactccatccgttttaaaatgagtgtcgttttag 50094214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 50591230 - 50591294
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||| ||||||||||||||||||||||||| |  | | |||||||||||| |||| |||||    
T  50591230 tactccattcgttttaaaatgagtgtcgctttagccaattgtacacagattaaggaatggaataa 50591294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 126
Target Start/End: Complemental strand, 2611028 - 2610993
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||||||||||||| |||||    
T  2611028 aatactccatccgttttaaaatgagtgtcgttttag 2610993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 10843024 - 10842957
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||||||||||||| ||||||||||||| ||||| |  | ||||| | |||||| ||||||||||    
T  10843024 taatactccatccgtttcaaaatgagtgtcgttttagtcaattgcacaaatattaaggaatgaaataa 10842957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 126
Target Start/End: Original strand, 27720911 - 27720946
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||| |||||||||||||||||||    
T  27720911 aatactccatccgtttcaaaatgagtgtcgctttag 27720946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 255113 - 255079
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||||||||||| |||||||||    
T  255113 atactccatccgttttaaaatgagtatcgctttag 255079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 5463817 - 5463783
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||| |||||||||||||||||||    
T  5463817 atactccatccgtttcaaaatgagtgtcgctttag 5463783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 34047150 - 34047212
Alignment:
Q  89 ttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg 151  Q
    |||||| ||| ||||||||||||||||||||| ||||||  ||  |||||| |||||||||||    
T  34047150 ttaatattccctccgttttaaaatgagtgtcgttttaggtgtttacacacatattaagaaatg 34047212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 43755112 - 43755051
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |||||||||||| |||| |||||||||||||| |||| |||||| || |||||||| ||||||    
T  43755112 aaagttggaagaaaaaa-ttaaagttgtattgaaaatgtaaagtgacgttcattttgaaataa 43755051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 44557241 - 44557207
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||||||||||| |||||||||    
T  44557241 atactccatccgttttaaaatgagtttcgctttag 44557207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 126
Target Start/End: Original strand, 49894755 - 49894793
Alignment:
Q  88 tttaatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  49894755 tttaatactccttccgttttaaaatgagtatcgctttag 49894793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 254830 - 254883
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaa 153  Q
    ||||||| ||||||||||||||||||| |  |  ||||||||||||||||||||    
T  254830 tccgtttcaaaatgagtgtcgctttagtcaattacacacagattaagaaatgaa 254883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 9552440 - 9552481
Alignment:
Q  287 ttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||||||||||||||| |||| | |||||||||||||||    
T  9552440 ttaaagttgtattggaaatgtaaaatgacattcattttaaaa 9552481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 34047433 - 34047400
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||||||||||| |||||    
T  34047433 tactccatccgttttaaaatgagtgtcgttttag 34047400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 35847845 - 35847878
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgcttta 125  Q
    |||||||||||||||| |||||||||||||||||    
T  35847845 atactccatccgttttgaaatgagtgtcgcttta 35847878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 44024499 - 44024532
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||| |||||||||||||||||||||||||||    
T  44024499 tactccctccgttttaaaatgagtgtcgctttag 44024532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 52125046 - 52125079
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||||||||||| |||||    
T  52125046 tactccatccgttttaaaatgagtgtcgttttag 52125079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 9333168 - 9333108
Alignment:
Q  269 aaagttggaagagaaaac-ttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||||||| ||||  ||||| ||||||| ||||| |||||||||||| |||||||||    
T  9333168 aaagttggaagaaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaa 9333108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 9356941 - 9356881
Alignment:
Q  269 aaagttggaagagaaaac-ttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||||||| ||||  ||||| ||||||| ||||| |||||||||||| |||||||||    
T  9356941 aaagttggaagaaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaa 9356881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 22665169 - 22665113
Alignment:
Q  101 ccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||||||||||||||||||||| |  | |||||||||||||  |||| |||||    
T  22665169 ccgttttaaaatgagtgtcgctttagtcaattgcacacagattaacgaatggaataa 22665113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 24041092 - 24041148
Alignment:
Q  269 aaagttggaagagaaaac-ttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||| ||||  |||||||||||||| |||| |||||| |||||||||||    
T  24041092 aaagttggaagaaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 24041148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 8e-56; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 90 - 324
Target Start/End: Original strand, 14979960 - 14980186
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaaac 184  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||| || ||||||| ||||    
T  14979960 taatactccctccgtttcaaaatgagtgtcgctttaggctttggcacacagattaagaaatggaatgaaataatcattggatataacacttttaccaaac 14980059  T
Q  185 tgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaa 284  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||    | |||||||||||| ||         | ||||||||||||||  |||    
T  14980060 tgcccttactttataagaaaaagacaaaattaaagttgcattgaaaatt----gtgagaaaaagttggag---------agggtaaagttggaaggaaaa 14980146  T
Q  285 acttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    | ||||||||||||||||||| |||||| |||||||||||    
T  14980147 aattaaagttgtattggaaatgtaaagtgacattcatttt 14980186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 93 - 324
Target Start/End: Original strand, 166561 - 166796
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||| |||||||||||||| |||| |  | ||||||||||||||     |||||||||||||||| || || || ||||||||||||||     
T  166561 tactccctccgtttcaaaatgagtgtcgcgttagccaattgcacacagattaaggaatgaaatgaaataatcattagaaataacacttttactaaactgc 166660  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
    ||||   ||||| | |||||||||| |||||||||||||||||||| || |||| ||||||||| |||||||||| | ||||||||||||||| |||| |    
T  166661 ccttgtattatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgaga-aaaaagttggagtatttattgagggtaaagttggaagaaaaaaat 166759  T
Q  288 taaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||||||||||||| |||||| |||||||||||    
T  166760 taaagttgtattggaaatgtaaagtgacattcatttt 166796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 93 - 231
Target Start/End: Original strand, 4967403 - 4967546
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||     ||||||||||||||||| |||||||||||||||||     
T  4967403 tactccctccgtttcaaaatgagtgtcgctttaggctttgacacacagattaagaaatggaatgaaataatcattggatataacgcttttactaaactgc 4967502  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaa 231  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  4967503 ccttactttataaaaaaaagacaaaattaaagttgcattgaaaa 4967546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 42329542 - 42329693
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| | |||||||| |||||||||||||||||||| || |||||| ||||||||||||||||||||| |||||||    
T  42329542 ttttactaaaataaccttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattaagggtaaag 42329641  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| |||| ||||||||||||||||||| |||||| |||||||||||    
T  42329642 ttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 42329693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 93 - 246
Target Start/End: Complemental strand, 31889960 - 31889802
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||||||||     ||||||| |||| |||| ||| ||| |||||||||     
T  31889960 tactccctccgtttcaaaatgagtgtagctttaggctttgacacacagattaagaaatggaatgaaataattattgaatataacgttttcactaaactgc 31889861  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  31889860 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaa 31889802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 93 - 324
Target Start/End: Complemental strand, 36660666 - 36660433
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactgt 187  Q
    |||||| || |||| |||||||||||||||||||    | |||||||||||||     ||||||||||||||||| || || || ||||||||||| |||    
T  36660666 tactccctctgtttcaaaatgagtgtcgctttagctaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgt 36660567  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
    |||||||||||||| |||||||||| ||||||||| ||  |||||| || |||   ||||| || |||||||||| | ||||||||||||||| |||| |    
T  36660566 ccttactttataagaaaaagacaaacttaaagttgtataaaaaattgtgagag---aaaagctggagtatttattgagggtaaagttggaagaaaaaaat 36660470  T
Q  288 taaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||||||||| |||| |||||| |||||||||||    
T  36660469 taaagttgtattgaaaatgtaaagtgacattcatttt 36660433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 88 - 327
Target Start/End: Complemental strand, 15400418 - 15400174
Alignment:
Q  88 tttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaaga-----aatgaaataatcattggatatgacgcttttactaa 182  Q
    |||| |||||| ||||||||||||||||||||| ||||||  |||||||||||||||| |     ||||||||||| ||| ||||| || ||||||||||    
T  15400418 tttattactccctccgttttaaaatgagtgtcgttttaggtgttggcacacagattaaaaaattgaatgaaataattattagatataacacttttactaa 15400319  T
Q  183 actgtcc-ttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagag 281  Q
    | |  || |||||||||||| |||||  ||| |||||||| ||||| ||||| |  ||||| |||||||  |||||||||| | | |||||||||||||     
T  15400318 aattccctttactttataagaaaaaggaaaacttaaagtttcattggaaattgtatgagag-aaaagtttgagtatttattgaggataaagttggaagaa 15400220  T
Q  282 aaaacttaaagttgtattggaaatataaagtaacattcattttaaa 327  Q
     ||| ||||||||||||||||||| |||||| ||||||||||||||    
T  15400219 gaaaattaaagttgtattggaaatgtaaagtgacattcattttaaa 15400174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 793602 - 793753
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| | |||||||| |||||||||||||||||||| || |||||| ||||||| ||||||||||| | |||| ||    
T  793602 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagtttaagtatttattgagggtagag 793701  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| |||| ||||||||||||||||||| |||||| |||||||||||    
T  793702 ttggaagaaaaaaattaaagttgtattggaaatgtaaagtgacattcatttt 793753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 33822499 - 33822650
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| | |||||||| |||||||||||||||||||| || |||||| ||||||||||||||||||| |||||||||    
T  33822499 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaaggtaaag 33822598  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||| ||||  ||| |||||||||||||| |||| |||||| |||||||||||    
T  33822599 ttgaaagaacaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 33822650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 100 - 324
Target Start/End: Complemental strand, 36783589 - 36783361
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaaga-----aatgaaataatcattggatatgacgcttttactaaactgtccttact 194  Q
    ||||||| ||||||||| ||||||||| |  | |||||||||||||||     ||||||||||||||| || || ||  |||||||||| || |||||||    
T  36783589 tccgtttcaaaatgagtatcgctttagccaattgcacacagattaagagatgaaatgaaataatcattagacataacatttttactaaattgcccttact 36783490  T
Q  195 ttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagtt 294  Q
    |  || | |||||||||| |||||||||||||||||||| || ||||| |||||||| || ||||| ||| ||||||||| ||||| |||| ||| ||||    
T  36783489 tgttatgaaaaagacaaatttaaagttgcattgaaaattgtgtgagag-aaaagttggagaatttactaagggtaaagttagaagaaaaaaattagagtt 36783391  T
Q  295 gtattggaaatataaagtaacattcatttt 324  Q
    ||||||||||| |||||| ||||| |||||    
T  36783390 gtattggaaatgtaaagtgacattaatttt 36783361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 203 - 328
Target Start/End: Original strand, 38982172 - 38982296
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||| |||||||||||||||||||| ||||||||||||  |||| ||||||||| | ||||||||||| ||| |||| ||||||||||||||||    
T  38982172 aaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaagtttga-gtatttattgagggtaaagttgggagaaaaaaattaaagttgtattgga 38982270  T
Q  303 aatataaagtaacattcattttaaaa 328  Q
    |||||||||| |||||||||||||||    
T  38982271 aatataaagtgacattcattttaaaa 38982296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 103 - 324
Target Start/End: Original strand, 4751452 - 4751678
Alignment:
Q  103 gttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactgtccttacttta 197  Q
    |||||||||||||||||| ||||| |  | ||||||| |||||     ||||||||||||||||| || || || ||||||||||||   ||||  ||||    
T  4751452 gttttaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaacaacccttgtttta 4751551  T
Q  198 taaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaag-agaaaacttaaagttgt 296  Q
    || | |||| ||||| ||||||||| |||||||||| || |||| ||||||||| |||||||||| | |||||||||||||| | |||| ||||||||||    
T  4751552 tatgaaaaaaacaaacttaaagttgaattgaaaattgtgtgaga-aaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgt 4751650  T
Q  297 attggaaatataaagtaacattcatttt 324  Q
    ||| |||||||||||| |||||||||||    
T  4751651 attagaaatataaagtgacattcatttt 4751678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 174 - 328
Target Start/End: Complemental strand, 34171318 - 34171166
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    |||||||||| |  |||||||||||||| | |||||||| |||||||||||||||||||| || ||||| |||||||  |||||||||| ||||||||||    
T  34171318 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattctgtgagag-aaaagtttgagtatttattgaaggtaaagt 34171220  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||| | |||| |||||||||||||| |||| |||||| |||||||||||||||    
T  34171219 tggaa-aaaaaaattaaagttgtattgaaaatgtaaagtgacattcattttaaaa 34171166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 100 - 324
Target Start/End: Complemental strand, 39060034 - 39059812
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataatcattggatatgacgcttttactaaactgtccttactttata 199  Q
    ||||||| ||||||||| || |||||| |  | | ||| |||||||| ||||||||||||||| || || || |||||||||||||  ||||  ||||||    
T  39060034 tccgtttaaaaatgagtatcactttagccaattgtacatagattaaggaatgaaataatcattagacataacacttttactaaactacccttgttttata 39059935  T
Q  200 aggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtatt 299  Q
     | |||| ||||| |||||||||||||||||||| |  |||| ||||| ||| |||||||||| | ||||||||| ||||| |||| |||||||||||||    
T  39059934 tgaaaaaaacaaacttaaagttgcattgaaaattgtatgaga-aaaaatttggagtatttattgagggtaaagttagaaga-aaaaattaaagttgtatt 39059837  T
Q  300 ggaaatataaagtaacattcatttt 324  Q
    | |||| ||||| ||||||||||||    
T  39059836 gaaaatgtaaagcaacattcatttt 39059812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 92 - 331
Target Start/End: Original strand, 43257772 - 43258005
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactg 186  Q
    ||||||| ||||||||||||||||||| | ||||| |  | |||||||||||||     ||||||||||||||||| || || || ||| ||||||||||    
T  43257772 atactccctccgttttaaaatgagtgt-gttttagccaattgcacacagattaaagaatgaaatgaaataatcattagacataacacttatactaaactg 43257870  T
Q  187 tccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaac 286  Q
     |||||||||||||| || ||||||| |||||||||||||||||||| || |||| ||| ||||||||         | | |||||||| |||| ||||     
T  43257871 cccttactttataagaaatagacaaacttaaagttgcattgaaaattgtgtgaga-aaacagttgaag---------aggataaagttgaaagaaaaaaa 43257960  T
Q  287 ttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||    
T  43257961 ttaaagttatattggaaatgtaaagtgacattcattttaaaataa 43258005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 103 - 324
Target Start/End: Original strand, 4742188 - 4742414
Alignment:
Q  103 gttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaactgtccttacttta 197  Q
    |||||||||||||||||| ||||| |  | ||||||| |||||     ||||||||||||||||  || || || ||||||||||||   ||||  ||||    
T  4742188 gttttaaaatgagtgtcgttttagtcaattgcacacatattaaggaatgaaatgaaataatcatcagacataacacttttactaaacaacccttgtttta 4742287  T
Q  198 taaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaag-agaaaacttaaagttgt 296  Q
    || | |||| ||||| ||||||||| |||||||||| || |||| ||||||||| |||||||||| | |||||||||||||| | |||| ||||||||||    
T  4742288 tatgaaaaaaacaaacttaaagttgaattgaaaattgtgtgaga-aaaaagttggagtatttattgagggtaaagttggaagaaaaaaaattaaagttgt 4742386  T
Q  297 attggaaatataaagtaacattcatttt 324  Q
    ||| |||||||||||| |||||||||||    
T  4742387 attagaaatataaagtgacattcatttt 4742414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 174 - 328
Target Start/End: Original strand, 33584971 - 33585126
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||| | | | |||||||| |||||||||||||||||||| || |||| | |||||||| |||||||||| |||||||||    
T  33584971 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtatttattgaaggtaaag 33585070  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||| |||| |||||||||||||| |||| |||||| || ||||||||||||    
T  33585071 ttggaagaaaaaaattaaagttgtattgaaaatgtaaagtgacgttcattttaaaa 33585126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 198 - 331
Target Start/End: Original strand, 32690753 - 32690885
Alignment:
Q  198 taaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgta 297  Q
    |||| ||||||||||  ||||||||||||||||||| |||||||||||| ||||||||||||||| |  |||||||||  ||| |||| |||||||||||    
T  32690753 taagaaaaagacaaacctaaagttgcattgaaaattgtgcgagagaaaa-gttgaagtatttattgagagtaaagttgagagaaaaaaattaaagttgta 32690851  T
Q  298 ttggaaatataaagtaacattcattttaaaataa 331  Q
    || ||||| |||||| ||||||||||| ||||||    
T  32690852 tttgaaatgtaaagtgacattcattttgaaataa 32690885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 331
Target Start/End: Complemental strand, 28640208 - 28640081
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgga 302  Q
    |||||||||| ||||||||| |||||||||| | |||||||||| ||||||||||||||| | ||||||||||| ||| |||| ||||||||| |||| |    
T  28640208 aaaagacaaacttaaagttgtattgaaaattgttcgagagaaaa-gttgaagtatttattgagggtaaagttgggagaaaaaaattaaagttgaattgaa 28640110  T
Q  303 aatataaagtaacattcattttaaaataa 331  Q
    ||| |||||| ||||| ||||||||||||    
T  28640109 aatgtaaagtgacatttattttaaaataa 28640081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 190 - 324
Target Start/End: Original strand, 29653526 - 29653661
Alignment:
Q  190 ttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaactt 288  Q
    |||||||||||| | |||||||| |||||||||||||  ||||| || |||||| |||||||  |||||||||| | ||||||||||||||| |||| ||    
T  29653526 ttactttataagaacaagacaaacttaaagttgcattagaaattgtgtgagagagaaaagttagagtatttattgagggtaaagttggaagaaaaaaatt 29653625  T
Q  289 aaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||||||||||||||| |||| | |||||||||||    
T  29653626 aaagttgtattggaaatgtaaaatgacattcatttt 29653661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 96 - 251
Target Start/End: Original strand, 4011576 - 4011734
Alignment:
Q  96 tccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaaactgtcct 190  Q
    ||||||||||| |||||||  || | ||||||||||| |||| |||||||||||||     ||||||||||||||||| ||| |||| ||||| || |||    
T  4011576 tccatccgtttcaaaatgacggt-gttttaggctttgacacatagattaagaaatggaatcaaataatcattggatataacgttttttctaaaatgccct 4011674  T
Q  191 tactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttg 251  Q
    || |||||||| |||||| |||||||||||||||||||||||| || |||| |||||||||    
T  4011675 tattttataagaaaaagataaaattaaagttgcattgaaaattgtgtgaga-aaaaagttg 4011734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 93 - 275
Target Start/End: Original strand, 27652231 - 27652419
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa-----tcattggatatgacgcttttactaaactgt 187  Q
    |||| |||||||||||||||||||||||||||||||  |  |||||||||||||||||| |||||     |||   |  || ||  |||||||||| |      
T  27652231 tacttcatccgttttaaaatgagtgtcgctttaggcaattacacacagattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaataa 27652330  T
Q  188 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttg 275  Q
    |||||||||||||| |||||||||| |||||||||||||||||||| || |||||| |||||||| | |||||||| | ||||||||||    
T  27652331 ccttactttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaagttggattatttattgagggtaaagttg 27652419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 92 - 324
Target Start/End: Original strand, 31557251 - 31557482
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat-----gaaataatcattggatatgacgcttttactaaactg 186  Q
    ||||||| |||||||||||| |||||||| ||||||  |||  ||||| ||||||||||     ||||||||||||  |||| |  |||||| |||||      
T  31557251 atactccctccgttttaaaacgagtgtcgttttaggtgttgatacacatattaagaaatagaatgaaataatcattaaatataatacttttagtaaacaa 31557350  T
Q  187 tcctt-actttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaa 285  Q
     |||| |||||||||| |||||||||| |||||||||||||||||||| || |||||||        |||||||||| ||  ||||||||||||| ||||    
T  31557351 ccctttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaa-------tagtatttattgaaaataaagttggaagaaaaaa 31557443  T
Q  286 cttaaagttgtattggaaatataaagtaacattcatttt 324  Q
     |||||||||||||| |||| |||| | |||||||||||    
T  31557444 attaaagttgtattgaaaatgtaaaatgacattcatttt 31557482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 203 - 324
Target Start/End: Original strand, 4833658 - 4833780
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattgg 301  Q
    |||||||||| |||||||||||||||||||| || || ||| |||||||  |||||||||| | ||||||||||||||| |||| ||||||||| ||||     
T  4833658 aaaagacaaacttaaagttgcattgaaaattgtgtgaaagagaaaagtttgagtatttattgagggtaaagttggaagaaaaaaattaaagttgcattga 4833757  T
Q  302 aaatataaagtaacattcatttt 324  Q
    |||| ||||| ||||||||||||    
T  4833758 aaatgtaaagcaacattcatttt 4833780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 13066827 - 13066719
Alignment:
Q  215 taaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaa 314  Q
    ||||||||||||||||||| ||| |||||||| |||| |||||||||| | ||||||||||||| | |||| ||||||||||||||||||| |||| | |    
T  13066827 taaagttgcattgaaaattgtgcaagagaaaa-gttggagtatttattgagggtaaagttggaaaaaaaaaattaaagttgtattggaaatgtaaaatga 13066729  T
Q  315 cattcatttt 324  Q
    ||||||||||    
T  13066728 cattcatttt 13066719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 174 - 368
Target Start/End: Original strand, 7388190 - 7388372
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagt 273  Q
    |||||||||| |||||||| |||||||| |||||| ||| |||||||||||||||||||| || |||   |||||||||||         | | |||||     
T  7388190 ttttactaaattgtccttattttataagaaaaagataaatttaaagttgcattgaaaattgtgagag---aaaagttgaag---------aggataaaga 7388277  T
Q  274 tggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataannnnnnnnnnaaagtaacacttattttaaaacagagg 368  Q
    ||||||| |||| ||||| |||||||| ||||||||||| ||||||||||||||| ||          |||||||||||||||||||||| ||||    
T  7388278 tggaagataaaaattaaaattgtattgaaaatataaagtgacattcattttaaaacaattttttaactaaagtaacacttattttaaaacggagg 7388372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 100 - 233
Target Start/End: Original strand, 12167529 - 12167667
Alignment:
Q  100 tccgttttaaaatgagtgtcgctttaggctttggcacacagattaaga-----aatgaaataatcattggatatgacgcttttactaaactgtccttact 194  Q
    ||||||| |||||||||||||||||||    | ||||||| |||||||     ||||||||||||||| || |  || |||||||||||||| |||||||    
T  12167529 tccgtttcaaaatgagtgtcgctttagctaattgcacacaaattaagaaattgaatgaaataatcattagacaaaacacttttactaaactgcccttact 12167628  T
Q  195 ttataaggaaaagacaaaattaaagttgcattgaaaatt 233  Q
    ||||||| ||| | |||| ||||||||||||||||||||    
T  12167629 ttataagaaaaggtcaaacttaaagttgcattgaaaatt 12167667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 159 - 324
Target Start/End: Complemental strand, 27810517 - 27810352
Alignment:
Q  159 cattggatatgacgcttttactaaactgtccttactttataaggaaaa-gacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtat 257  Q
    ||||| |||| || |||||||||||||| | ||  |||||| | |||| || ||| ||||||||| |||||||||| || |||| ||||||||  |||||    
T  27810517 cattgcatataacacttttactaaactgccattgttttatatgaaaaaagataaatttaaagttgtattgaaaattgtgtgaga-aaaaagtttgagtat 27810419  T
Q  258 ttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||||| | | |||||||| |||| |||| |||||||||||||| |||| |||||| |||||||||||    
T  27810418 ttattgaggataaagttgaaagaaaaaaattaaagttgtattgaaaatgtaaagtgacattcatttt 27810352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 216 - 324
Target Start/End: Complemental strand, 4371476 - 4371369
Alignment:
Q  216 aaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaac 315  Q
    |||||||||||||||||| || |||||||||  |||| ||||||||| | ||||||||| | ||| |||| ||||||||||||||||||| |||||| ||    
T  4371476 aaagttgcattgaaaattgtgtgagagaaaagtttga-gtatttattgagggtaaagtttggagaaaaaaattaaagttgtattggaaatgtaaagtgac 4371378  T
Q  316 attcatttt 324  Q
     ||||||||    
T  4371377 gttcatttt 4371369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 246
Target Start/End: Original strand, 8961011 - 8961104
Alignment:
Q  152 aaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||||||| || || || |||||||||||||||| ||| |||||||| |||||| ||| ||||||||||| |||||||| || |||||||||    
T  8961011 aaataatcattagacataacacttttactaaactgtc-ttattttataagaaaaagataaatttaaagttgcaatgaaaattgtgtgagagaaaa 8961104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 12992176 - 12992070
Alignment:
Q  215 taaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaa 314  Q
    ||||||||||||||||||| ||| |||| |||||||| |||||||||| | | ||||||||||  | |||| ||||||||||||| ||||| |||| | |    
T  12992176 taaagttgcattgaaaattgtgcaagag-aaaagttggagtatttattgaggataaagttgga--aaaaaaattaaagttgtattagaaatgtaaaatga 12992080  T
Q  315 cattcatttt 324  Q
    ||||||||||    
T  12992079 cattcatttt 12992070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 42661843 - 42661916
Alignment:
Q  84 attatttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| |  | ||||||| |||||| ||||||||||    
T  42661843 attatttaatactccattcgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataa 42661916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 26660999 - 26660931
Alignment:
Q  89 ttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||||| ||||||||||||||||||||||||||| |  | ||||||| |||||| ||||||||||    
T  26660999 ttaatactccctccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataa 26660931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 26932592 - 26932524
Alignment:
Q  89 ttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||||| ||||||||||||||||||||||||||| |  | ||||||| |||||| ||||||||||    
T  26932592 ttaatactccctccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataa 26932524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 34972560 - 34972626
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||| ||||||||||||||||||||||||||| |  | ||||||||||||| ||||| |||||    
T  34972560 aatactccctccgttttaaaatgagtgtcgctttagccaattgcacacagattaataaatggaataa 34972626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 321
Target Start/End: Complemental strand, 33741597 - 33741474
Alignment:
Q  197 ataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgt 296  Q
    ||||| |||||| ||| |||||||||||||| ||||| || |  || |||||||  ||||| |||||| ||||||||| ||||| |||| | |||||||     
T  33741597 ataagaaaaagataaacttaaagttgcattggaaattgtgtggtag-aaaagttagagtatatattaagggtaaagtttgaagaaaaaaatgaaagttgc 33741499  T
Q  297 attggaaatataaagtaacattcat 321  Q
    |||| |||| |||||| ||||||||    
T  33741498 attgaaaatgtaaagtgacattcat 33741474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 39504969 - 39504933
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||||||||||||||||||||||||||||||||||    
T  39504969 taatactccatccgttttaaaatgagtgtcgctttag 39504933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 4011728 - 4011787
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||||||| |||| |||||||||||| |||||| |||||| || ||||||||||||    
T  4011728 aaagttggaagaaaaaaattaaagttgtatcggaaatgtaaagtgacgttcattttaaaa 4011787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 34919918 - 34919847
Alignment:
Q  146 gaaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaa 217  Q
    ||||| |||||||||||||| ||  |  ||||||||||||| |||||||||||||| |||||||||| ||||    
T  34919918 gaaataaaataatcattggacatagcaattttactaaactgcccttactttataagaaaaagacaaacttaa 34919847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 328
Target Start/End: Original strand, 7731663 - 7731744
Alignment:
Q  247 agttgaagtatttattaaaggtaaagttggaagagaaaac-ttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||| |||||||||| | ||||||||| ||||| ||||  |||||||||| ||| ||||||||||| |||||||||||||||    
T  7731663 agttggagtatttattga-ggtaaagtttgaagaaaaaaaattaaagttgttttgaaaatataaagtgacattcattttaaaa 7731744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 2729697 - 2729762
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    ||||||||||||||| ||||||| ||||||||||| |  | ||| |||||||||| ||||||||||    
T  2729697 atactccatccgtttcaaaatgattgtcgctttagccaattgcatacagattaaggaatgaaataa 2729762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 208
Target Start/End: Original strand, 8755530 - 8755651
Alignment:
Q  87 atttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataatcattggatatgacgcttttactaaactg 186  Q
    ||||| |||||| ||||||||||||| ||| || ||||||    | ||||| |  ||||||||||||||||||||  || || || |||||| |||||||    
T  8755530 atttattactccctccgttttaaaataagtatcactttagcgaattgcacaaatgttaagaaatgaaataatcatcagacataacacttttattaaactg 8755629  T
Q  187 tccttactttataaggaaaaga 208  Q
    |||||  |||||||| ||||||    
T  8755630 tcctttttttataagaaaaaga 8755651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 292
Target Start/End: Complemental strand, 29044860 - 29044757
Alignment:
Q  189 cttactttataaggaaaagacaaaattaaagttgcattgaaaattatg-cgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaact 287  Q
    ||||||||||||| | |||| ||| |||||||||||||||||||| ||  ||||| |||||||  || ||||||| | | ||||||||||||| |||| |    
T  29044860 cttactttataagaataagataaacttaaagttgcattgaaaattgtgtggagag-aaaagtttgagcatttattgaggataaagttggaagaaaaaaat 29044762  T
Q  288 taaag 292  Q
    |||||    
T  29044761 taaag 29044757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 324
Target Start/End: Complemental strand, 17674320 - 17674214
Alignment:
Q  217 aagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaaca 316  Q
    |||||| || ||||||| || ||||||||| ||||||||||||||| | | ||||||| || |  |||| |||||||| ||||| |||  |||||| |||    
T  17674320 aagttgtatagaaaattgtgtgagagaaaa-gttgaagtatttattgaggataaagttagacgtaaaaaattaaagttttattgaaaacgtaaagtgaca 17674222  T
Q  317 ttcatttt 324  Q
    ||||||||    
T  17674221 ttcatttt 17674214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 126
Target Start/End: Complemental strand, 36296332 - 36296297
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||| ||||||||||||||||||||||||||||    
T  36296332 aatactctatccgttttaaaatgagtgtcgctttag 36296297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 246
Target Start/End: Complemental strand, 41566906 - 41566867
Alignment:
Q  207 gacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  41566906 gacaaacttaaagttgcattgaaaattatacgagagaaaa 41566867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 43584293 - 43584356
Alignment:
Q  87 atttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaat 150  Q
    |||||||||||||||||||||||| | ||||||| ||||||  ||  |||||| ||||||||||    
T  43584293 atttaatactccatccgttttaaagtaagtgtcgttttaggtgtttacacacatattaagaaat 43584356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 21319242 - 21319304
Alignment:
Q  95 ctccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||| ||||| ||||||| ||||||||||||| | || ||||| |||||||| ||||||||||    
T  21319242 ctccctccgtcttaaaataagtgtcgctttagccatttgcacatagattaaggaatgaaataa 21319304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 27658771 - 27658737
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||| |||||||||||||||||||||||||    
T  27658771 atactccatacgttttaaaatgagtgtcgctttag 27658737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 7144791 - 7144824
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgcttta 125  Q
    ||||||||||||||||||||||||| ||||||||    
T  7144791 atactccatccgttttaaaatgagtatcgcttta 7144824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 15566452 - 15566485
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    |||||| |||||||||||||||||||||||||||    
T  15566452 tactccctccgttttaaaatgagtgtcgctttag 15566485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 15567157 - 15567096
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg 151  Q
    ||||||||| ||| ||| ||||||||||||||||||| | ||  ||||||||||||| ||||    
T  15567157 taatactccctccatttcaaaatgagtgtcgctttagccattttcacacagattaaggaatg 15567096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 331
Target Start/End: Complemental strand, 16886149 - 16886084
Alignment:
Q  266 ggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaataa 331  Q
    ||||||||||||||| |||| |||||||||||||| ||||  ||||  || |||||||| ||||||    
T  16886149 ggtaaagttggaagaaaaaaattaaagttgtattgaaaatgcaaagcgacgttcattttgaaataa 16886084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 24436454 - 24436543
Alignment:
Q  95 ctccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaag-----aaatgaaataatcattggatatgacgcttttac 179  Q
    |||| ||||||||||||||||||||| ||||| |  | ||||| ||||||||     |||||||||||||||| ||||| || |||||||    
T  24436454 ctccctccgttttaaaatgagtgtcgttttagccaattgcacatagattaaggaataaaatgaaataatcattagatataacacttttac 24436543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 32963204 - 32963171
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||||||||||||| ||||||    
T  32963204 tactccatccgttttaaaatgagtgtcactttag 32963171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 39730188 - 39730123
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||| || ||||||||||||||||||| |||||||  | ||||||| |||||| |||| |||||    
T  39730188 atactctattcgttttaaaatgagtgtcgttttaggcaattgcacacatattaaggaatggaataa 39730123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 41845374 - 41845435
Alignment:
Q  269 aaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaata 330  Q
    ||||||| |||| |||| ||||| |||||||| |||| |||||| ||||||||||| |||||    
T  41845374 aaagttgaaagaaaaaaattaaaattgtattgaaaatgtaaagtgacattcattttgaaata 41845435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 10344853 - 10344913
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg 151  Q
    |||||||| ||||||| ||||||||||||| ||||||  ||  |||||| |||||||||||    
T  10344853 aatactccctccgtttcaaaatgagtgtcgttttaggtctttacacacatattaagaaatg 10344913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 17674160 - 17674196
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  17674160 taatactccctccgttttaaaatgagtgtcactttag 17674196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 29044697 - 29044733
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgctttag 126  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  29044697 taatactccatccgtttcaaaatgactgtcgctttag 29044733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 42103975 - 42104039
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||| ||||||| ||||||||||||||||||| |  | ||||||| |||||| |||| |||||    
T  42103975 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataa 42104039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 174 - 324
Target Start/End: Original strand, 70451 - 70602
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||||| |||| ||||| ||||||||| |||||||||| || |||||| |||||||| |||||||||| | |||||||    
T  70451 ttttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaag 70550  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    |||||||| |||| ||||||||| |||| |||| |||||| |||||||||||    
T  70551 ttggaagaaaaaaattaaagttgcattgaaaatgtaaagtgacattcatttt 70602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 174 - 328
Target Start/End: Original strand, 4106 - 4260
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaa-gacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaag 272  Q
    |||||| ||| ||||||||||||||||  |||| |||||| ||||||||  ||||||||||||| ||||||||| |||| |||||||||| | | |||||    
T  4106 ttttacgaaattgtccttactttataaaaaaaatgacaaacttaaagtttgattgaaaattatgtgagagaaaa-gttggagtatttattgaggataaag 4204  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||| |||| ||||| ||||||| ||||| |||||||||||| |||||||||    
T  4205 ttggaagaaaaaaattaaaattgtattagaaatgtaaagtaacatttattttaaaa 4260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 1815 - 1689
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaat-----aatcattggatatgacgcttttactaaactg 186  Q
    ||||||| ||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||     ||||||||||||| ||  |||||||||||||    
T  1815 atactccctccgtttcaaaatgagtgtcgctttagacgttggcacatagattaagaaatgaaatgaaataatcattggatataacatttttactaaactg 1716  T
Q  187 tccttactttataaggaaaagacaaaa 213  Q
     |||||||||||||| |||||||||||    
T  1715 accttactttataagaaaaagacaaaa 1689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 92 - 213
Target Start/End: Complemental strand, 9554 - 9428
Alignment:
Q  92 atactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaat-----aatcattggatatgacgcttttactaaactg 186  Q
    ||||||| ||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||     ||||||||||||| ||  |||||||||||||    
T  9554 atactccctccgtttcaaaatgagtgtcgctttagacgttggcacatagattaagaaatgaaatgaaataatcattggatataacatttttactaaactg 9455  T
Q  187 tccttactttataaggaaaagacaaaa 213  Q
     |||||||||||||| |||||||||||    
T  9454 accttactttataagaaaaagacaaaa 9428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 198 - 328
Target Start/End: Original strand, 13081 - 13210
Alignment:
Q  198 taaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgta 297  Q
    |||| ||||||||||||||||||| ||||||||||| |||  ||||||| ||||||||||||||| | ||||||||||| ||| |||| ||||| |||||    
T  13081 taagaaaaagacaaaattaaagttacattgaaaattgtgccggagaaaa-gttgaagtatttattgagggtaaagttgggagaaaaaaattaaaattgta 13179  T
Q  298 ttggaaatataaagtaacattcattttaaaa 328  Q
    |||||||| |||||| || ||||||||||||    
T  13180 ttggaaatgtaaagtgacgttcattttaaaa 13210  T

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Target: scaffold0072 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 88 - 324
Target Start/End: Original strand, 11989 - 12219
Alignment:
Q  88 tttaatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatg-----aaataatcattggatatgacgcttttactaa 182  Q
    |||| |||||| ||||||| |||||||||||||||||||    | ||||| |||||||| ||||     ||||||||||| || || || ||||||||||    
T  11989 tttattactccctccgtttcaaaatgagtgtcgctttagcgaattgcacagagattaaggaatggaatgaaataatcattagacataacacttttactaa 12088  T
Q  183 actgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagaga 282  Q
    |||| |||||||||||||| |||||||||| |||||||||||||||||||| || |||||||||  ||||           | ||||||||||||||| |    
T  12089 actg-ccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttga----------gagggtaaagttggaagaaa 12177  T
Q  283 aaacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    ||| |||||||| |||||||||| |||| | |||||||||||    
T  12178 aaaattaaagttatattggaaatgtaaaatgacattcatttt 12219  T

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Target: scaffold0194 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 91 - 324
Target Start/End: Complemental strand, 8391 - 8163
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaa-----gaaatgaaataatcattggatatgacgcttttactaaact 185  Q
    |||||| ||| ||||| ||||||| |||||||||||| |||||||||||||||||     | ||||||||||||||||||||| | ||||||||||||||    
T  8391 aatacttcattcgtttcaaaatgaatgtcgctttaggttttggcacacagattaaaaaatggaatgaaataatcattggatataaggcttttactaaact 8292  T
Q  186 gtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaag--agaa 283  Q
    | |||| ||||||           |||||||||||||| ||||||||| || ||||| |||||||| ||||||| || | | |||||||| |||  | ||    
T  8291 gcccttgctttat-----------aaaattaaagttgctttgaaaattgtgtgagag-aaaagttggagtattttttgaggttaaagttgaaagaaaaaa 8204  T
Q  284 aacttaaagttgtattggaaatataaagtaacattcatttt 324  Q
    || |||||||||||||| |||| |||| | |||||||||||    
T  8203 aaattaaagttgtattgaaaatgtaaattgacattcatttt 8163  T

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Target: scaffold0003 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 174 - 328
Target Start/End: Complemental strand, 321882 - 321727
Alignment:
Q  174 ttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagaga-aaaagttgaagtatttattaaaggtaaag 272  Q
    |||||||||| |  |||||||||||| | | |||||||| ||||| |||||||||||||| || |||||  |||||||  |||| ||||| | |||||||    
T  321882 ttttactaaaataaccttactttataggaacaagacaaacttaaaattgcattgaaaattgtgtgagagcgaaaagtttgagtaattattgagggtaaag 321783  T
Q  273 ttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    |||||||| |||| ||||||||||||||||||| |||||  |||||||||||||||    
T  321782 ttggaagaaaaaaattaaagttgtattggaaatgtaaagcgacattcattttaaaa 321727  T

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Target: scaffold0238 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 326
Target Start/End: Original strand, 16011 - 16188
Alignment:
Q  147 aaatgaaataatcattggatatgacgcttttactaaactgtccttactttataaggaaaagacaaaattaaagttgcattgaaaattatgcgagagaaaa 246  Q
    ||||||||||||||||  |||| ||  ||||||||||||  | |||||||||||  ||| |||||| |||||||||||||||||||| || ||||||||     
T  16011 aaatgaaataatcattatatataacatttttactaaactacctttactttataaa-aaatgacaaacttaaagttgcattgaaaattgtgtgagagaaag 16109  T
Q  247 agttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatataaagtaacattcattttaa 326  Q
     |||| | |||||||| | ||||||||| ||||| |||| |||||||||||||  ||||||||||  ||||| |||||||    
T  16110 -gttggaatatttattgagggtaaagtttgaagaaaaaaattaaagttgtattaaaaatataaagagacatttattttaa 16188  T

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Target: scaffold0519 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 208 - 328
Target Start/End: Original strand, 7732 - 7849
Alignment:
Q  208 acaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttggaagagaaaacttaaagttgtattggaaatat 307  Q
    ||||| |||||||||||||||||||| || ||||| ||||||||||||||||||| |   ||||||||||||| |||| | |||||||||||  |||| |    
T  7732 acaaacttaaagttgcattgaaaattgtgtgagag-aaaagttgaagtatttattgagattaaagttggaaga-aaaattaaaagttgtatt-aaaatgt 7828  T
Q  308 aaagtaacattcattttaaaa 328  Q
    ||||| |||||||||||||||    
T  7829 aaagtgacattcattttaaaa 7849  T

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Target: scaffold0007 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 203 - 275
Target Start/End: Complemental strand, 158225 - 158154
Alignment:
Q  203 aaaagacaaaattaaagttgcattgaaaattatgcgagagaaaaagttgaagtatttattaaaggtaaagttg 275  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||||||||    
T  158225 aaaagacaaacttaaagttgcattgaaaattatgcgagag-aaaagttgtagtatttattgagggtaaagttg 158154  T

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Target: scaffold0110 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 24652 - 24716
Alignment:
Q  93 tactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||||||||||||||||||||||||||||| | || | ||||| |||||| |||| |||||    
T  24652 tactccatccgttttaaaatgagtgtcgctttagccatttgtacacatattaaggaatggaataa 24716  T

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Target: scaffold0060 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 31671 - 31626
Alignment:
Q  283 aaacttaaagttgtattggaaatataaagtaacattcattttaaaa 328  Q
    ||||||||| || |||||||||| ||||||||||||||||||||||    
T  31671 aaacttaaaattttattggaaatgtaaagtaacattcattttaaaa 31626  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 21283 - 21248
Alignment:
Q  90 taatactccatccgttttaaaatgagtgtcgcttta 125  Q
    ||||||||||||||||||||||||||||||| ||||    
T  21283 taatactccatccgttttaaaatgagtgtcgtttta 21248  T

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Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 20991 - 21057
Alignment:
Q  91 aatactccatccgttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||| ||||||||||||| ||||||||||||| |  | ||||| |||||||| ||| ||||||    
T  20991 aatactccctccgttttaaaattagtgtcgctttagccaattgcacatagattaaggaataaaataa 21057  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 1371 - 1424
Alignment:
Q  104 ttttaaaatgagtgtcgctttaggctttggcacacagattaagaaatgaaataa 157  Q
    |||||||||||||||| |||||| |  | |||||||||||||| ||||||||||    
T  1371 ttttaaaatgagtgtcactttagtcaattgcacacagattaaggaatgaaataa 1424  T

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