View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10229_low_12 (Length: 273)

Name: NF10229_low_12
Description: NF10229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10229_low_12
NF10229_low_12
[»] chr3 (63 HSPs)
chr3 (1-260)||(16384377-16384636)
chr3 (1-260)||(16831533-16831792)
chr3 (1-260)||(13944889-13945148)
chr3 (1-260)||(8744395-8744654)
chr3 (27-253)||(17189265-17189491)
chr3 (27-253)||(24190195-24190420)
chr3 (24-253)||(31941791-31942020)
chr3 (24-253)||(31692197-31692426)
chr3 (1-253)||(12357539-12357791)
chr3 (32-253)||(16825291-16825512)
chr3 (27-253)||(18131359-18131585)
chr3 (1-254)||(14290543-14290796)
chr3 (1-259)||(10408833-10409091)
chr3 (1-254)||(35983046-35983299)
chr3 (1-259)||(47126809-47127067)
chr3 (31-253)||(12181239-12181461)
chr3 (1-259)||(28757184-28757442)
chr3 (27-253)||(11958193-11958419)
chr3 (72-253)||(12857508-12857689)
chr3 (27-254)||(17494538-17494768)
chr3 (24-259)||(16326713-16326950)
chr3 (64-254)||(15230531-15230721)
chr3 (64-254)||(15236399-15236589)
chr3 (1-205)||(13317629-13317833)
chr3 (1-83)||(11949107-11949189)
chr3 (166-217)||(3688960-3689011)
chr3 (174-220)||(10008625-10008671)
chr3 (174-220)||(10909235-10909281)
chr3 (65-211)||(19727679-19727825)
chr3 (66-154)||(15008695-15008783)
chr3 (166-217)||(5421992-5422043)
chr3 (138-253)||(12508577-12508692)
chr3 (174-217)||(20059116-20059159)
chr3 (66-152)||(2037025-2037111)
chr3 (66-152)||(2040766-2040852)
chr3 (171-217)||(6597077-6597123)
chr3 (171-217)||(6603757-6603803)
chr3 (1-127)||(11861208-11861334)
chr3 (171-217)||(12889731-12889777)
chr3 (171-217)||(13255712-13255758)
chr3 (66-152)||(14039676-14039762)
chr3 (171-217)||(15586454-15586500)
chr3 (171-217)||(16638795-16638841)
chr3 (171-217)||(16753763-16753809)
chr3 (65-127)||(23079166-23079228)
chr3 (171-217)||(43165697-43165743)
chr3 (171-217)||(48428469-48428515)
chr3 (65-205)||(23414861-23415001)
chr3 (166-217)||(15345307-15345358)
chr3 (174-217)||(15399580-15399623)
chr3 (174-217)||(15713118-15713161)
chr3 (1-127)||(12501788-12501914)
chr3 (65-127)||(15065990-15066052)
chr3 (180-217)||(26790475-26790512)
chr3 (180-217)||(53382081-53382118)
chr3 (181-217)||(24186222-24186258)
chr3 (72-211)||(12843168-12843307)
chr3 (174-217)||(15359077-15359120)
chr3 (72-127)||(17497617-17497672)
chr3 (65-127)||(16695083-16695145)
chr3 (225-254)||(2245683-2245712)
chr3 (75-127)||(14873734-14873786)
chr3 (72-208)||(15262556-15262692)
[»] chr7 (39 HSPs)
chr7 (1-254)||(14144887-14145140)
chr7 (1-260)||(18050717-18050976)
chr7 (1-253)||(14283145-14283397)
chr7 (27-253)||(11385200-11385426)
chr7 (24-253)||(15099374-15099603)
chr7 (3-250)||(12712437-12712684)
chr7 (6-253)||(12798275-12798519)
chr7 (1-254)||(19150237-19150490)
chr7 (1-254)||(20749636-20749889)
chr7 (27-253)||(16947243-16947469)
chr7 (72-253)||(14261017-14261198)
chr7 (1-259)||(26091563-26091821)
chr7 (1-259)||(26115355-26115613)
chr7 (1-259)||(40924582-40924840)
chr7 (20-259)||(21755657-21755896)
chr7 (21-259)||(49155547-49155785)
chr7 (24-253)||(12459877-12460106)
chr7 (1-223)||(13676677-13676899)
chr7 (78-259)||(13024647-13024828)
chr7 (20-259)||(13965433-13965672)
chr7 (93-250)||(13004783-13004940)
chr7 (64-254)||(12203570-12203760)
chr7 (63-253)||(15627811-15628001)
chr7 (65-217)||(9591653-9591805)
chr7 (174-217)||(12690896-12690939)
chr7 (174-217)||(15157889-15157932)
chr7 (171-217)||(8710997-8711043)
chr7 (171-215)||(10873853-10873897)
chr7 (174-217)||(11234045-11234088)
chr7 (174-217)||(11549934-11549977)
chr7 (174-217)||(44788183-44788226)
chr7 (171-217)||(14335788-14335834)
chr7 (65-127)||(16726360-16726422)
chr7 (65-127)||(17703374-17703436)
chr7 (171-217)||(18587003-18587049)
chr7 (174-217)||(13689436-13689479)
chr7 (174-217)||(14957903-14957946)
chr7 (63-217)||(11984279-11984433)
chr7 (174-220)||(18181138-18181184)
[»] chr8 (27 HSPs)
chr8 (1-260)||(22054165-22054424)
chr8 (6-253)||(22027507-22027754)
chr8 (27-259)||(31413753-31413985)
chr8 (2-254)||(19985483-19985735)
chr8 (21-259)||(16268445-16268683)
chr8 (1-259)||(28984213-28984471)
chr8 (27-254)||(21928756-21928983)
chr8 (1-253)||(22374171-22374423)
chr8 (75-253)||(29300653-29300831)
chr8 (67-254)||(20391454-20391641)
chr8 (72-230)||(22523883-22524041)
chr8 (166-220)||(19481335-19481389)
chr8 (65-217)||(30310407-30310559)
chr8 (166-217)||(17671288-17671339)
chr8 (174-217)||(19115872-19115915)
chr8 (174-217)||(20015529-20015572)
chr8 (180-217)||(22117441-22117478)
chr8 (65-217)||(15536749-15536901)
chr8 (75-127)||(21163883-21163935)
chr8 (174-217)||(18860049-18860092)
chr8 (72-127)||(21391214-21391269)
chr8 (72-127)||(21780540-21780595)
chr8 (174-217)||(22126225-22126268)
chr8 (65-218)||(32603511-32603664)
chr8 (66-154)||(6606795-6606883)
chr8 (166-217)||(21671982-21672033)
chr8 (143-223)||(3274550-3274629)
[»] scaffold0003 (2 HSPs)
scaffold0003 (2-260)||(203647-203905)
scaffold0003 (174-250)||(424746-424822)
[»] scaffold0765 (1 HSPs)
scaffold0765 (1-260)||(6037-6296)
[»] scaffold0005 (1 HSPs)
scaffold0005 (2-260)||(263492-263750)
[»] scaffold0239 (1 HSPs)
scaffold0239 (1-260)||(9567-9826)
[»] chr5 (42 HSPs)
chr5 (1-260)||(17266293-17266552)
chr5 (65-254)||(21870243-21870432)
chr5 (65-254)||(21874523-21874712)
chr5 (28-259)||(22505856-22506087)
chr5 (27-253)||(23563134-23563360)
chr5 (20-259)||(14883951-14884190)
chr5 (20-259)||(20345451-20345690)
chr5 (20-259)||(25851241-25851480)
chr5 (27-259)||(23077865-23078097)
chr5 (72-253)||(21983143-21983324)
chr5 (171-220)||(27521741-27521790)
chr5 (72-211)||(21561033-21561172)
chr5 (66-217)||(23669847-23669998)
chr5 (65-127)||(18782346-18782408)
chr5 (138-250)||(23474499-23474611)
chr5 (174-217)||(14996744-14996787)
chr5 (174-217)||(22138006-22138049)
chr5 (174-217)||(22329892-22329935)
chr5 (166-217)||(27665508-27665559)
chr5 (174-217)||(27682405-27682448)
chr5 (166-217)||(40712110-40712161)
chr5 (66-152)||(16258103-16258189)
chr5 (171-217)||(16359837-16359883)
chr5 (66-152)||(22591822-22591908)
chr5 (66-152)||(22595377-22595463)
chr5 (171-217)||(34569829-34569875)
chr5 (75-127)||(23526293-23526345)
chr5 (174-217)||(19773298-19773341)
chr5 (75-218)||(21883017-21883160)
chr5 (174-217)||(27613694-27613737)
chr5 (174-217)||(41774180-41774223)
chr5 (1-85)||(20779063-20779147)
chr5 (83-211)||(21331997-21332125)
chr5 (63-211)||(21631407-21631555)
chr5 (174-217)||(22351257-22351300)
chr5 (72-211)||(26735736-26735875)
chr5 (174-217)||(29473078-29473121)
chr5 (174-217)||(37288501-37288544)
chr5 (65-259)||(21410366-21410560)
chr5 (72-154)||(43122688-43122770)
chr5 (168-260)||(23461306-23461398)
chr5 (1-85)||(22465100-22465184)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-253)||(40323-40575)
[»] scaffold0348 (2 HSPs)
scaffold0348 (20-253)||(17271-17504)
scaffold0348 (1-249)||(4640-4888)
[»] chr2 (31 HSPs)
chr2 (1-260)||(12577220-12577479)
chr2 (1-253)||(19716341-19716593)
chr2 (1-253)||(19720904-19721156)
chr2 (27-253)||(23097342-23097568)
chr2 (1-250)||(23274460-23274709)
chr2 (1-259)||(20848456-20848711)
chr2 (66-217)||(28350807-28350958)
chr2 (66-249)||(21901469-21901652)
chr2 (65-210)||(23116426-23116571)
chr2 (168-217)||(44382933-44382982)
chr2 (3-127)||(24657108-24657232)
chr2 (174-217)||(17002037-17002080)
chr2 (166-217)||(22322705-22322756)
chr2 (174-217)||(24265407-24265450)
chr2 (166-217)||(24713063-24713114)
chr2 (171-217)||(9338616-9338662)
chr2 (171-217)||(9487250-9487296)
chr2 (174-220)||(10871887-10871933)
chr2 (171-217)||(16984274-16984320)
chr2 (65-127)||(22462931-22462993)
chr2 (65-126)||(23205245-23205306)
chr2 (65-126)||(23676849-23676910)
chr2 (1-127)||(11351161-11351287)
chr2 (75-121)||(21320459-21320505)
chr2 (171-217)||(27374303-27374349)
chr2 (180-217)||(16931598-16931635)
chr2 (63-199)||(24817218-24817354)
chr2 (174-217)||(24874113-24874156)
chr2 (1-127)||(24704932-24705058)
chr2 (75-127)||(23028912-23028963)
chr2 (75-127)||(24678428-24678480)
[»] chr4 (38 HSPs)
chr4 (1-260)||(51603569-51603828)
chr4 (1-260)||(53750247-53750506)
chr4 (1-253)||(14993151-14993403)
chr4 (1-253)||(16150872-16151124)
chr4 (1-253)||(16155018-16155270)
chr4 (27-249)||(18259703-18259925)
chr4 (1-253)||(15073595-15073847)
chr4 (27-253)||(15267038-15267264)
chr4 (1-259)||(3261572-3261830)
chr4 (1-259)||(20893267-20893525)
chr4 (1-259)||(7357503-7357761)
chr4 (20-259)||(11204010-11204249)
chr4 (1-259)||(29450315-29450573)
chr4 (1-259)||(44658644-44658902)
chr4 (72-254)||(14697408-14697590)
chr4 (1-131)||(27903621-27903751)
chr4 (66-256)||(8708978-8709168)
chr4 (72-250)||(13879416-13879594)
chr4 (65-218)||(18604378-18604531)
chr4 (65-217)||(13513650-13513802)
chr4 (166-217)||(8389810-8389861)
chr4 (72-211)||(8343-8482)
chr4 (174-217)||(8050186-8050229)
chr4 (174-217)||(14300542-14300585)
chr4 (166-217)||(19775356-19775407)
chr4 (166-217)||(23959145-23959196)
chr4 (166-217)||(27714734-27714785)
chr4 (171-217)||(12480003-12480049)
chr4 (171-217)||(16233555-16233601)
chr4 (171-217)||(17091712-17091758)
chr4 (65-127)||(18224123-18224185)
chr4 (72-205)||(16219495-16219628)
chr4 (72-205)||(16222815-16222948)
chr4 (72-211)||(15602-15741)
chr4 (174-217)||(14683973-14684016)
chr4 (174-217)||(40476446-40476489)
chr4 (166-218)||(14162871-14162923)
chr4 (174-217)||(19635542-19635585)
[»] scaffold0067 (4 HSPs)
scaffold0067 (27-253)||(64389-64615)
scaffold0067 (27-253)||(48967-49193)
scaffold0067 (27-253)||(58001-58227)
scaffold0067 (24-253)||(29912-30141)
[»] scaffold0034 (3 HSPs)
scaffold0034 (1-250)||(11696-11945)
scaffold0034 (1-253)||(1739-1991)
scaffold0034 (1-131)||(70637-70767)
[»] scaffold1914 (1 HSPs)
scaffold1914 (24-260)||(1010-1246)
[»] scaffold0222 (2 HSPs)
scaffold0222 (1-260)||(267-526)
scaffold0222 (24-253)||(21102-21331)
[»] chr6 (41 HSPs)
chr6 (27-253)||(21566920-21567146)
chr6 (27-253)||(24515343-24515569)
chr6 (1-252)||(18797790-18798041)
chr6 (27-253)||(14376845-14377071)
chr6 (6-250)||(34642517-34642762)
chr6 (1-223)||(19438102-19438324)
chr6 (1-259)||(24367500-24367758)
chr6 (24-253)||(10465777-10466006)
chr6 (76-253)||(25771019-25771196)
chr6 (27-250)||(19456149-19456372)
chr6 (27-250)||(19466294-19466517)
chr6 (72-205)||(21474771-21474904)
chr6 (93-250)||(19881588-19881745)
chr6 (41-254)||(19486222-19486435)
chr6 (72-211)||(23081594-23081733)
chr6 (66-163)||(16813805-16813902)
chr6 (66-154)||(8720733-8720821)
chr6 (143-253)||(18660161-18660271)
chr6 (166-220)||(28312892-28312946)
chr6 (65-254)||(30677952-30678141)
chr6 (1-253)||(15462436-15462688)
chr6 (174-217)||(25115822-25115865)
chr6 (171-217)||(16575157-16575203)
chr6 (171-217)||(16620177-16620223)
chr6 (1-122)||(27559029-27559150)
chr6 (171-220)||(28260162-28260211)
chr6 (171-220)||(28285705-28285754)
chr6 (171-220)||(28338911-28338960)
chr6 (174-217)||(22829354-22829397)
chr6 (174-217)||(24292750-24292793)
chr6 (171-217)||(29589407-29589453)
chr6 (183-220)||(27205901-27205938)
chr6 (183-220)||(27243290-27243327)
chr6 (1-85)||(20010599-20010683)
chr6 (174-217)||(2871770-2871813)
chr6 (174-217)||(5836196-5836239)
chr6 (65-216)||(21764976-21765127)
chr6 (77-127)||(25756670-25756720)
chr6 (225-253)||(21474908-21474936)
chr6 (75-127)||(22437043-22437095)
chr6 (72-211)||(25958724-25958863)
[»] scaffold0476 (1 HSPs)
scaffold0476 (27-253)||(332-558)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-259)||(53204-53462)
[»] scaffold0664 (1 HSPs)
scaffold0664 (1-253)||(7303-7555)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-253)||(164188-164440)
scaffold0023 (75-127)||(30487-30539)
[»] scaffold1299 (1 HSPs)
scaffold1299 (27-253)||(1635-1861)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-260)||(8242-8501)
scaffold0235 (1-260)||(18456-18715)
[»] scaffold0010 (4 HSPs)
scaffold0010 (27-253)||(39120-39346)
scaffold0010 (65-217)||(14753-14905)
scaffold0010 (1-126)||(180753-180878)
scaffold0010 (72-250)||(5251-5429)
[»] scaffold0058 (1 HSPs)
scaffold0058 (27-253)||(22413-22639)
[»] scaffold0053 (3 HSPs)
scaffold0053 (27-254)||(62558-62785)
scaffold0053 (27-127)||(65211-65311)
scaffold0053 (148-253)||(65109-65214)
[»] scaffold1433 (1 HSPs)
scaffold1433 (27-253)||(1098-1324)
[»] scaffold0404 (1 HSPs)
scaffold0404 (27-253)||(8035-8261)
[»] scaffold0004 (2 HSPs)
scaffold0004 (27-253)||(319534-319760)
scaffold0004 (27-181)||(325998-326151)
[»] scaffold0156 (1 HSPs)
scaffold0156 (24-253)||(37227-37456)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-250)||(98373-98622)
scaffold0020 (1-253)||(176252-176504)
[»] chr1 (32 HSPs)
chr1 (1-253)||(21742408-21742660)
chr1 (2-253)||(20832757-20833007)
chr1 (1-253)||(22015601-22015853)
chr1 (27-253)||(21738892-21739118)
chr1 (27-250)||(19857582-19857805)
chr1 (27-259)||(24096465-24096697)
chr1 (24-259)||(21961332-21961567)
chr1 (20-235)||(52989042-52989257)
chr1 (1-259)||(31536847-31537105)
chr1 (20-259)||(20074559-20074798)
chr1 (20-259)||(20297684-20297923)
chr1 (1-259)||(48426155-48426413)
chr1 (1-259)||(38909676-38909934)
chr1 (1-259)||(37680331-37680589)
chr1 (63-250)||(16379407-16379594)
chr1 (65-218)||(21228447-21228600)
chr1 (66-250)||(18273114-18273298)
chr1 (166-220)||(41350560-41350614)
chr1 (105-217)||(21045046-21045158)
chr1 (166-217)||(16347490-16347541)
chr1 (166-217)||(16354138-16354189)
chr1 (174-220)||(51330384-51330430)
chr1 (166-217)||(33387924-33387975)
chr1 (1-250)||(20853619-20853868)
chr1 (138-250)||(22117102-22117214)
chr1 (67-218)||(17041907-17042057)
chr1 (174-217)||(19109791-19109834)
chr1 (174-217)||(21833723-21833766)
chr1 (168-230)||(21752465-21752527)
chr1 (174-217)||(21842633-21842676)
chr1 (174-217)||(22400741-22400784)
chr1 (168-218)||(22402010-22402060)
[»] scaffold0072 (1 HSPs)
scaffold0072 (24-260)||(54335-54571)
[»] scaffold1530 (1 HSPs)
scaffold1530 (31-250)||(799-1018)
[»] scaffold0074 (1 HSPs)
scaffold0074 (27-253)||(15363-15589)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-253)||(50370-50622)
[»] scaffold0056 (1 HSPs)
scaffold0056 (27-260)||(663-896)
[»] scaffold0751 (1 HSPs)
scaffold0751 (1-254)||(5446-5698)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-254)||(16902-17155)
[»] scaffold0706 (1 HSPs)
scaffold0706 (1-253)||(4996-5248)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-249)||(8879-9127)
[»] scaffold0029 (4 HSPs)
scaffold0029 (1-201)||(115827-116027)
scaffold0029 (174-217)||(107600-107643)
scaffold0029 (75-124)||(8553-8602)
scaffold0029 (1-126)||(93808-93933)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-249)||(4244-4492)
scaffold0017 (1-127)||(16979-17105)
[»] scaffold0523 (2 HSPs)
scaffold0523 (1-253)||(5705-5954)
scaffold0523 (20-259)||(11524-11763)
[»] scaffold0102 (1 HSPs)
scaffold0102 (27-253)||(42989-43215)
[»] scaffold0106 (1 HSPs)
scaffold0106 (27-253)||(34628-34854)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-254)||(70373-70626)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-253)||(153757-154009)
[»] scaffold1032 (1 HSPs)
scaffold1032 (24-254)||(601-831)
[»] scaffold0518 (1 HSPs)
scaffold0518 (103-253)||(2198-2348)
[»] scaffold0151 (1 HSPs)
scaffold0151 (27-253)||(329-555)
[»] scaffold0146 (1 HSPs)
scaffold0146 (27-253)||(71-297)
[»] scaffold0192 (1 HSPs)
scaffold0192 (33-250)||(29824-30041)
[»] scaffold0434 (1 HSPs)
scaffold0434 (65-253)||(5689-5877)
[»] scaffold0031 (1 HSPs)
scaffold0031 (65-253)||(115953-116141)
[»] scaffold0865 (1 HSPs)
scaffold0865 (72-253)||(1059-1240)
[»] scaffold0133 (1 HSPs)
scaffold0133 (72-253)||(28072-28253)
[»] scaffold0490 (1 HSPs)
scaffold0490 (86-253)||(3215-3382)
[»] scaffold0167 (1 HSPs)
scaffold0167 (27-253)||(5344-5570)
[»] scaffold0188 (1 HSPs)
scaffold0188 (70-259)||(33153-33342)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-253)||(6070-6321)
[»] scaffold0243 (2 HSPs)
scaffold0243 (27-250)||(9562-9785)
scaffold0243 (72-211)||(23774-23913)
[»] scaffold1517 (1 HSPs)
scaffold1517 (75-253)||(1274-1452)
[»] scaffold1426 (1 HSPs)
scaffold1426 (1-259)||(1388-1646)
[»] scaffold0367 (1 HSPs)
scaffold0367 (27-253)||(8808-9034)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-259)||(42000-42258)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-250)||(51916-52165)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-253)||(4091-4343)
[»] scaffold0118 (1 HSPs)
scaffold0118 (20-259)||(745-984)
[»] scaffold0001 (1 HSPs)
scaffold0001 (24-259)||(514134-514369)
[»] scaffold2062 (1 HSPs)
scaffold2062 (27-249)||(663-885)
[»] scaffold0276 (1 HSPs)
scaffold0276 (1-259)||(23704-23962)
[»] scaffold0261 (2 HSPs)
scaffold0261 (27-253)||(12201-12425)
scaffold0261 (27-253)||(20381-20605)
[»] scaffold1056 (1 HSPs)
scaffold1056 (27-253)||(2011-2236)
[»] scaffold0317 (1 HSPs)
scaffold0317 (1-223)||(2896-3118)
[»] scaffold0054 (2 HSPs)
scaffold0054 (1-182)||(63377-63558)
scaffold0054 (207-253)||(63326-63372)
[»] scaffold0310 (1 HSPs)
scaffold0310 (24-259)||(11265-11500)
[»] scaffold0203 (2 HSPs)
scaffold0203 (1-130)||(764-893)
scaffold0203 (171-253)||(3838-3920)
[»] scaffold1845 (1 HSPs)
scaffold1845 (39-259)||(1085-1305)
[»] scaffold0405 (1 HSPs)
scaffold0405 (1-253)||(5867-6119)
[»] scaffold0104 (1 HSPs)
scaffold0104 (1-248)||(43211-43458)
[»] scaffold2165 (1 HSPs)
scaffold2165 (24-220)||(623-819)
[»] scaffold0585 (1 HSPs)
scaffold0585 (125-243)||(657-775)
[»] scaffold0068 (1 HSPs)
scaffold0068 (24-259)||(66889-67124)
[»] scaffold0100 (1 HSPs)
scaffold0100 (72-254)||(16395-16577)
[»] scaffold0077 (1 HSPs)
scaffold0077 (72-250)||(57404-57582)
[»] scaffold0270 (2 HSPs)
scaffold0270 (72-250)||(7209-7387)
scaffold0270 (72-250)||(14339-14517)
[»] scaffold0190 (1 HSPs)
scaffold0190 (75-253)||(30113-30291)
[»] scaffold0040 (1 HSPs)
scaffold0040 (72-254)||(18181-18363)
[»] scaffold0130 (2 HSPs)
scaffold0130 (72-254)||(3678-3860)
scaffold0130 (65-123)||(7696-7754)
[»] scaffold0009 (2 HSPs)
scaffold0009 (78-259)||(251961-252142)
scaffold0009 (65-211)||(229681-229827)
[»] scaffold0443 (1 HSPs)
scaffold0443 (1-100)||(12062-12161)
[»] scaffold0148 (1 HSPs)
scaffold0148 (63-254)||(2326-2517)
[»] scaffold0042 (2 HSPs)
scaffold0042 (63-253)||(26679-26869)
scaffold0042 (75-127)||(36733-36785)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-218)||(36763-36980)
[»] scaffold0457 (1 HSPs)
scaffold0457 (171-259)||(13835-13923)
[»] scaffold0113 (1 HSPs)
scaffold0113 (183-259)||(17686-17762)
[»] scaffold1274 (1 HSPs)
scaffold1274 (138-211)||(20-93)
[»] scaffold0708 (1 HSPs)
scaffold0708 (78-203)||(4982-5107)
[»] scaffold0088 (2 HSPs)
scaffold0088 (171-259)||(30345-30433)
scaffold0088 (27-133)||(30225-30331)
[»] scaffold0080 (3 HSPs)
scaffold0080 (75-127)||(32218-32270)
scaffold0080 (65-217)||(10062-10214)
scaffold0080 (65-217)||(12717-12869)
[»] scaffold1600 (1 HSPs)
scaffold1600 (138-253)||(468-583)
[»] scaffold0609 (2 HSPs)
scaffold0609 (87-250)||(7908-8071)
scaffold0609 (66-164)||(1269-1367)
[»] scaffold0447 (1 HSPs)
scaffold0447 (72-211)||(1693-1832)
[»] scaffold0431 (1 HSPs)
scaffold0431 (174-217)||(10803-10846)
[»] scaffold0383 (1 HSPs)
scaffold0383 (72-211)||(4557-4696)
[»] scaffold0075 (2 HSPs)
scaffold0075 (72-211)||(48066-48205)
scaffold0075 (72-211)||(55300-55439)
[»] scaffold0018 (2 HSPs)
scaffold0018 (72-211)||(23127-23266)
scaffold0018 (63-199)||(9192-9328)
[»] scaffold0006 (1 HSPs)
scaffold0006 (72-211)||(104562-104701)
[»] scaffold0012 (1 HSPs)
scaffold0012 (72-250)||(216210-216388)
[»] scaffold0044 (2 HSPs)
scaffold0044 (65-218)||(17489-17642)
scaffold0044 (174-217)||(3859-3902)
[»] scaffold0333 (1 HSPs)
scaffold0333 (21-209)||(18935-19123)
[»] scaffold0289 (1 HSPs)
scaffold0289 (65-260)||(117-312)
[»] scaffold0285 (1 HSPs)
scaffold0285 (65-217)||(5327-5479)
[»] scaffold0273 (1 HSPs)
scaffold0273 (75-127)||(379-431)
[»] scaffold0819 (1 HSPs)
scaffold0819 (75-126)||(453-504)
[»] scaffold0081 (2 HSPs)
scaffold0081 (76-127)||(21944-21995)
scaffold0081 (76-127)||(37368-37419)
[»] scaffold0028 (3 HSPs)
scaffold0028 (178-217)||(11891-11930)
scaffold0028 (178-217)||(21419-21458)
scaffold0028 (174-214)||(55439-55479)
[»] scaffold1881 (1 HSPs)
scaffold1881 (65-127)||(393-455)
[»] scaffold0546 (1 HSPs)
scaffold0546 (65-127)||(208-270)
[»] scaffold0507 (1 HSPs)
scaffold0507 (136-250)||(11428-11542)
[»] scaffold0501 (1 HSPs)
scaffold0501 (75-205)||(263-393)
[»] scaffold0451 (1 HSPs)
scaffold0451 (65-127)||(13945-14007)
[»] scaffold0109 (1 HSPs)
scaffold0109 (65-127)||(13037-13099)
[»] scaffold0055 (1 HSPs)
scaffold0055 (171-213)||(22679-22721)
[»] scaffold0052 (1 HSPs)
scaffold0052 (171-213)||(7668-7710)
[»] scaffold1220 (1 HSPs)
scaffold1220 (1-218)||(1-218)
[»] scaffold0993 (1 HSPs)
scaffold0993 (72-205)||(1318-1451)
[»] scaffold0331 (1 HSPs)
scaffold0331 (138-211)||(14808-14881)
[»] scaffold0293 (1 HSPs)
scaffold0293 (72-209)||(15746-15883)
[»] scaffold0181 (1 HSPs)
scaffold0181 (1-106)||(28862-28967)
[»] scaffold0177 (2 HSPs)
scaffold0177 (65-218)||(14863-15016)
scaffold0177 (65-127)||(11269-11331)
[»] scaffold0605 (1 HSPs)
scaffold0605 (1-85)||(1545-1629)
[»] scaffold0297 (1 HSPs)
scaffold0297 (75-211)||(7486-7622)
[»] scaffold1423 (1 HSPs)
scaffold1423 (72-127)||(291-346)
[»] scaffold0621 (2 HSPs)
scaffold0621 (72-211)||(353-492)
scaffold0621 (72-211)||(4770-4909)
[»] scaffold0611 (1 HSPs)
scaffold0611 (72-127)||(9356-9411)
[»] scaffold0282 (1 HSPs)
scaffold0282 (138-217)||(13297-13376)
[»] scaffold0207 (1 HSPs)
scaffold0207 (72-211)||(4384-4523)
[»] scaffold0165 (1 HSPs)
scaffold0165 (114-213)||(12322-12421)
[»] scaffold0120 (1 HSPs)
scaffold0120 (72-127)||(14420-14475)
[»] scaffold0412 (1 HSPs)
scaffold0412 (1-127)||(15492-15618)
[»] scaffold0180 (1 HSPs)
scaffold0180 (72-130)||(30923-30981)
[»] scaffold0122 (1 HSPs)
scaffold0122 (111-205)||(40342-40436)
[»] scaffold0679 (1 HSPs)
scaffold0679 (225-254)||(821-850)
[»] scaffold0278 (1 HSPs)
scaffold0278 (114-211)||(3929-4026)
[»] scaffold0259 (1 HSPs)
scaffold0259 (180-217)||(8699-8736)
[»] scaffold0198 (1 HSPs)
scaffold0198 (174-215)||(30725-30766)
[»] scaffold0098 (1 HSPs)
scaffold0098 (225-254)||(25949-25978)
[»] scaffold0357 (1 HSPs)
scaffold0357 (166-210)||(17807-17851)
[»] scaffold0342 (1 HSPs)
scaffold0342 (138-250)||(14055-14167)
[»] scaffold0319 (1 HSPs)
scaffold0319 (174-218)||(6938-6982)
[»] scaffold0305 (1 HSPs)
scaffold0305 (3-127)||(3131-3255)


Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 16384636 - 16384377
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16384636 gcttgcaatcagccaacatgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggactttctcgccacactt 16384537  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  16384536 aaaacaaactatctcagcaggagcatctctcctattcggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactgtatggcttagga 16384437  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16384436 cgactctgttgtcccttacctcttcgctcactcatcaccttataatgagctttgctgtcc 16384377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 16831792 - 16831533
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16831792 gcttgcagtccgctaacacgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacactt 16831693  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  16831692 aaaacaaactatctcagcaggagcatctctcctattcggcctcctctcatcattaagtctctgcttacccttatcagcaggggcactatacggcttagga 16831593  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
     |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16831592 tgactctgctgtcccttacctcttcgctcactcatcaccttataatgagctttggtgtcc 16831533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 13944889 - 13945148
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||| |||| || |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13944889 gcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacactt 13944988  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    ||| || |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||||||| ||||  |||||||| ||||| ||||||    
T  13944989 aaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttagga 13945088  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||| | || ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13945089 cgattctgatgtcccttacctcttcgctcactcatcaccttataatgagctttggtgtcc 13945148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 8744654 - 8744395
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||| |||| || |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8744654 gcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacactt 8744555  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    ||| || |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||||||| ||||  |||||||| ||||| ||||||    
T  8744554 aaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttagga 8744455  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||| | || ||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  8744454 cgattctgatgtcccttacctcttcgctcactcatcactttataatgagctttggtgtcc 8744395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 17189265 - 17189491
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| |||||||||    
T  17189265 ttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaacaggagcat 17189364  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || | ||||||||||||||||| ||||||| | ||||||| |||||| |||||||||||||| |||||||| ||||| ||||| ||||| ||    
T  17189365 ctctcctcttggacctcctctcatcattaaatctctgctttcccttgttagcaggagcactgtacggcttcggacgactctgctggcccttgcctctgcg 17189464  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     |||||||||||||| |||||||||||    
T  17189465 gtcactcatcaccttgtaatgagcttt 17189491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 24190195 - 24190420
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| |||||||||    
T  24190195 ttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaacaggagcat 24190294  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | ||   ||||||||||||||| | ||||||| | |||||||||||||| |||||||||||||| |||||||| |||||  |||| ||||| ||    
T  24190295 ctctcctcttgtacctcctctcatcattcaatctctgctttcccttgtcagcaggagcactgtacggcttcggacgactctgctg-gccttgcctctgcg 24190393  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     ||| |||||||||| |||||||||||    
T  24190394 gtcagtcatcaccttgtaatgagcttt 24190420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 31941791 - 31942020
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||||| |||||||||||||    
T  31941791 cccttctgaccacacctgaaacacttcttctcatctttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggag 31941890  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    ||| |||| |||| ||||||||||||||||| |   ||||| | || ||||||||||| ||||| |||||||| |||||||| |||| ||| || |  ||    
T  31941891 catttctcctattgggcctcctctcatcattcaacttctgcttccctttgtcagcaggagcactatacggcttcggacgactctgctatcctttgctcct 31941990  T
Q  224 tcgctcactcatcaccttataatgagcttt 253  Q
    ||| ||||||||||||||||||||||||||    
T  31941991 tcgatcactcatcaccttataatgagcttt 31942020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 253
Target Start/End: Complemental strand, 31692426 - 31692197
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||  ||||||| |||||||||| ||    
T  31692426 cccttctaaccacacctgaaacacttcttctcatctttggtacaaacattactcttgtggcctttctcaccacacttgtaacaaacgatctcagcagaag 31692327  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    ||| |||| |||| ||||||||||||||||| |   ||||| | || ||||||||||| ||||| |||||||| |||||||| |||||||| || |  ||    
T  31692326 catttctcctattgggcctcctctcatcattcaacttctgcttccctttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgctcct 31692227  T
Q  224 tcgctcactcatcaccttataatgagcttt 253  Q
    ||| ||||||||||||||||||||||||||    
T  31692226 tcgatcactcatcaccttataatgagcttt 31692197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 12357791 - 12357539
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||| |||||||||||   ||| || |||||||||||||||||||||||||||||||| ||   ||| || ||||||||||||||||| |||||||||||    
T  12357791 gcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacagacattactcttgtggcctttttcgccacactt 12357692  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| ||||||||||||| ||||||| | || ||||||||||||||||| || |||| | | |||||||||||||| ||||| || || ||||||    
T  12357691 gtagcaaacaatctcagcaggagtatctctcctcttgggcctcctctcatcattcagcctctactttcccttgtcagcaggagcactatatggtttagga 12357592  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| || |||||||||||||| ||||||||||||||||| |||||||||||    
T  12357591 cgactctgatgtcccttacctctgcgctcactcatcaccttgtaatgagcttt 12357539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 32 - 253
Target Start/End: Complemental strand, 16825512 - 16825291
Alignment:
Q  32 accacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctc 131  Q
    |||||||||||||||||||||||||||   |  |||||| ||||||||||||||||| || |||||||| |||||||| || |||| |||||||||||||    
T  16825512 accacacctgaagcacttcttctcatcacggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctc 16825413  T
Q  132 atattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcac 231  Q
    || || |||||||||||||| || | ||||| | |||||||||||| ||||||||| |||||||| ||||||||  |||||||||| ||||| |||||||    
T  16825412 atcttgggcctcctctcatctttcaatctctacttacccttgtcaggaggggcactatacggcttcggacgactcagctgtcccttgcctctgcgctcac 16825313  T
Q  232 tcatcaccttataatgagcttt 253  Q
    |||||||||| |||||||||||    
T  16825312 tcatcaccttgtaatgagcttt 16825291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 18131585 - 18131359
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||||||||||||||||||||| ||   |||||| |||||||||||||||||||||||||||||  | ||| | |||||| |||||||||    
T  18131585 ttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcgccacacttgtagcaatcaatctcaacaggagcat 18131486  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||| ||| ||||||||  | || ||||||||||| ||||| || || ||||||||||| |||||||| |||||||| ||    
T  18131485 ctctcctcttgggcctcctctcattattcagtctctgttttcctttgtcagcaggagcactatatggtttaggacgactctgctgtcctttacctctccg 18131386  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     ||||||||||| || |||||||||||    
T  18131385 ttcactcatcactttgtaatgagcttt 18131359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 14290796 - 14290543
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||| |||||||||||   ||| || ||||| |||||||| |||||||||||||||||      ||| || |||||||||||||||||||| ||||||||    
T  14290796 gcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcaatcacacacattactcttgtggcctttctcaccacactt 14290697  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
     || ||||  ||||||| ||||||||||||| | || ||||||||||||||||| || |||||  |||| ||||||||||| ||||| ||||| || |||    
T  14290696 gaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcgga 14290597  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
    ||||| ||||||||||||||||| |||||||||||||| |||||||||||||||    
T  14290596 cgactctgctgtcccttacctctgcgctcactcatcactttataatgagctttg 14290543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 10408833 - 10409091
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||| ||    
T  10408833 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacattt 10408932  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| |||||||| |||||||||||| | || |||||||| ||||||   |   ||||  |||||||||||||||| |||||||| |||||||||    
T  10408933 gtaacaaacaatctcagctggagcatctctcctcttgggcctcctatcatcacccatcttctgtttacccttgtcagcaggagcactgtaaggcttagga 10409032  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||||| || ||||||||||| || | ||||||||| | ||| |||||||||||| ||||    
T  10409033 cgactctggtgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtc 10409091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 35983046 - 35983299
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacact 99  Q
    ||||||||||||| ||   ||| || ||||| ||||| ||||| |||||||||||||| | ||| ||| || |||||||||||||||||||| |||||||    
T  35983046 gcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatc-tcggtcacacacattactcttgtggcctttctcaccacact 35983144  T
Q  100 taaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagg 199  Q
    | || ||||  ||| ||| ||||||||||||| | || ||||||||||||||||| || |||||  |||| ||||||||||| ||||| ||||| || ||    
T  35983145 tgaagcaaataatcacagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcgg 35983244  T
Q  200 acgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
    || ||| ||||||||||||||||| | |||||||||||| |||||||||||||||    
T  35983245 acaactctgctgtcccttacctctgcactcactcatcactttataatgagctttg 35983299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 47126809 - 47127067
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  47126809 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 47126908  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| |||||||||||||| | || |||||||| ||||||   |  |||||| | || ||||||||||| |||||||| |||||||||    
T  47126909 gtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcctttgtcagcaggagcactgtaaggcttagga 47127008  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | || ||||||||||| || | ||||||||| | |||||||||||||||| ||||    
T  47127009 cgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtc 47127067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 31 - 253
Target Start/End: Original strand, 12181239 - 12181461
Alignment:
Q  31 gaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctct 130  Q
    ||||||| ||||||||||||||||||||  |   ||| || ||||||||||||||||| || |||||||| || ||||  || |||| ||||||||||||    
T  12181239 gaccacaactgaagcacttcttctcatctctatcacagactttactcttgtggcctttttcaccacacttgaagcaaaaaatgtcagtaggagcatctct 12181338  T
Q  131 catattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctca 230  Q
    | | || | ||||||||||||||| |  |||| | |||||||||||||||| ||||| ||||||||  ||||||| || |||||||| |||||||| |||    
T  12181339 cctcttggtcctcctctcatcatttaacctctacttacccttgtcagcaggagcactatacggcttcagacgactctgttgtcccttgcctcttcgttca 12181438  T
Q  231 ctcatcaccttataatgagcttt 253  Q
    ||||||||||| |||||||||||    
T  12181439 ctcatcaccttgtaatgagcttt 12181461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 28757184 - 28757442
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  28757184 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 28757283  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| |||||||||||||| | || |||||||| ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||    
T  28757284 gtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttagga 28757383  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | || ||||||||||| || | ||||||||| | ||| |||||||||||| ||||    
T  28757384 cgattctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtc 28757442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 11958419 - 11958193
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||| |||||| |||||||  |   |||| | || || ||||||||||| || ||||||||| ||||||| || |||||||||||||    
T  11958419 ttctgaccacacctgaaacacttcctctcatctctaccacaagcattgcttttgtggcctttttcaccacacttataacaaacaatttcagcaggagcat 11958320  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | ||  ||||||| |||||||| | ||||||  | || ||||||||||| |||||||| || ||||||||| | ||||||||||||||||| |     
T  11958319 ctctcctcttaagcctcctatcatcattcattctctgtttccctttgtcagcaggagcactgtaaggtttaggacgattctgctgtcccttacctctcct 11958220  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
    ||||||||||||||| |||||| ||||    
T  11958219 ctcactcatcaccttgtaatgaacttt 11958193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 72 - 253
Target Start/End: Complemental strand, 12857689 - 12857508
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||| ||||||| || || |||||||| ||||| || ||||||| ||||||||||||| | || ||||||||||||||||| ||||  ||  |||| |    
T  12857689 ttactcatgtggcccttttcaccacacttgaaacagacaatctcagtaggagcatctctccttttaggcctcctctcatcattcagtccttgtttacctt 12857590  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    |||||||||| ||||| ||||| || |||||||| | ||||||||| ||||| |||||||||||||||||||||||||||||    
T  12857589 tgtcagcaggagcactatacggttttggacgactctactgtcccttgcctctacgctcactcatcaccttataatgagcttt 12857508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 27 - 254
Target Start/End: Original strand, 17494538 - 17494768
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||||| |||||||||||||||  |   |||||| ||||||||||||||||| || ||||| || || ||||| ||||||| | ||||||    
T  17494538 ttctgaccacacctga-gcacttcttctcatctctatcacaaacattactcttgtggcctttttcaccacatttgaagcaaacaatctcagtatgagcat 17494636  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctaccctt----gtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctc 222  Q
    ||||| | || ||||||||||||||||| |  |||||| |||||||    | ||||||| ||||| || ||||| | ||||||||| ||||||||  |||    
T  17494637 ctctcctcttgggcctcctctcatcatttaacctctgcttacccttctcagccagcaggagcactatatggcttcgaacgactttgttgtcccttggctc 17494736  T
Q  223 ttcgctcactcatcaccttataatgagctttg 254  Q
    | ||||||||||||||||| ||||||||||||    
T  17494737 tgcgctcactcatcaccttgtaatgagctttg 17494768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 259
Target Start/End: Complemental strand, 16326950 - 16326713
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaacta-tctcagcagga 122  Q
    |||||||||||||||||||| || ||| |||||||  |   |||||| || |||||||||||||| || ||||||||| ||||||| | |||||||||||    
T  16326950 cccttctgaccacacctgaaacatttcctctcatctctaccacaaacattgctcttgtggcctttttcaccacacttataacaaacaagtctcagcagga 16326851  T
Q  123 gca-tctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacct 221  Q
    ||| |||||| | || || ||||| |||||||| |   | ||| | || ||||||||||| |||||||  |||||||||||||| ||||||||||| ||     
T  16326850 gcagtctctcctcttgggtctcctatcatcattcaccttttgctttcctttgtcagcaggagcactgtcaggcttaggacgactctgctgtcccttgccc 16326751  T
Q  222 cttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    || | ||||||||| | ||| |||||||||||| ||||    
T  16326750 ctcctctcactcattatcttgtaatgagctttggtgtc 16326713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 254
Target Start/End: Original strand, 15230531 - 15230721
Alignment:
Q  64 tacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctg 163  Q
    ||||||| |||||||||||||| || || ||||||||  | ||||| |||||||||||| ||||| |  | || ||||||||||||||||| | ||| ||    
T  15230531 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttg 15230630  T
Q  164 cctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccct--tacctcttcgctcactcatcaccttataatgagctttg 254  Q
    | | || ||||||||||| ||||| || ||||||||||||| ||| || || |  | ||||||  ||||||||| ||||||||||||||||||    
T  15230631 cttccctttgtcagcaggagcactatagggcttaggacgaccttgttggcctttgttcctctt--ctcactcataaccttataatgagctttg 15230721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 254
Target Start/End: Original strand, 15236399 - 15236589
Alignment:
Q  64 tacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctg 163  Q
    ||||||| |||||||||||||| || || ||||||||  | ||||| |||||||||||| ||||| |  | || ||||||||||||||||| | ||| ||    
T  15236399 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttg 15236498  T
Q  164 cctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccct--tacctcttcgctcactcatcaccttataatgagctttg 254  Q
    | | || ||||||||||| ||||| || ||||||||||||| ||| || || |  | ||||||  ||||||||| ||||||||||||||||||    
T  15236499 cttccctttgtcagcaggagcactatagggcttaggacgaccttgttggcctttgttcctctt--ctcactcataaccttataatgagctttg 15236589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 13317833 - 13317629
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||| ||||| |  ||||| || |||||||| ||||| |||||||||||||| ||||| ||||| ||||| |||||||||||  | ||||||||    
T  13317833 gcttgcaatccgctaaaacatgacctttttgaccacatctgaaacacttcttctcatctttggtgcaaacattacttttgtggccttttgcaccacactt 13317734  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| |  ||| ||||||||||||||    | ||||||||||||||||| | | | ||  | || ||||||||||| |||||||| ||||| ||     
T  13317733 gtaacaaacaacatcaacaggagcatctctccccctaggcctcctctcatcatttaatatttgttttcctttgtcagcaggagcactgtagggcttcggg 13317634  T
Q  201 cgact 205  Q
    |||||    
T  13317633 cgact 13317629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11949189 - 11949107
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtgg 83  Q
    |||| ||||||||||| | ||| || ||||||||||| |||||||||||||||||||| || |||||||| ||||||||||||    
T  11949189 gcttacaatcagctaatatgtgtcctttctgaccacatctgaagcacttcttctcatctttagtacaaacattactcttgtgg 11949107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 3688960 - 3689011
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  3688960 tacccttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 3689011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 10008625 - 10008671
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  10008625 tcagcaggggcactgtacggcttaggacgactctgctgtcccttacc 10008671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 10909235 - 10909281
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  10909235 tcagcaggggcactgtacggcttaggacgactctgctgtcccttacc 10909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 211
Target Start/End: Original strand, 19727679 - 19727825
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||| |||||||||| ||||||||||| |||||  || | ||||| |||||||||  | ||||| || | || ||||||||||||||||| | ||| ||     
T  19727679 acaagcgttactcttatggcctttctcaccacaagtatagcaaacaatctcagcaacaacatctttctttttaggcctcctctcatcattcaatctttgt 19727778  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
     | ||||| |||||||| |||||||| ||||| ||| ||||||||||    
T  19727779 ttgcccttatcagcaggagcactgtaaggctttggaagactttgctg 19727825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 154
Target Start/End: Complemental strand, 15008783 - 15008695
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcatt 154  Q
    ||||| ||||||||||||||| |||| ||||||||  | ||||| |||||||||||| |||||||| | || || ||||||||||||||    
T  15008783 caaacattactcttgtggcctctctcaccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcatt 15008695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 5422043 - 5421992
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  5422043 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 5421992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 253
Target Start/End: Complemental strand, 12508692 - 12508577
Alignment:
Q  138 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatca 237  Q
    |||||| |||||||||| |  ||||||  |||||| ||||| || |||||||| ||||| |||||||||||||| | ||||||| | | |||||||||      
T  12508692 ggcctcttctcatcattcaccctctgctcacccttatcagccggagcactgtaaggctttggacgactttgctgactcttacctttcctctcactcatag 12508593  T
Q  238 ccttataatgagcttt 253  Q
    |||| |||||||||||    
T  12508592 ccttgtaatgagcttt 12508577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 20059159 - 20059116
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  20059159 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 20059116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 2037111 - 2037025
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatca 152  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| |||||||| | || || ||||||||||||    
T  2037111 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 2037025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 2040852 - 2040766
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatca 152  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| |||||||| | || || ||||||||||||    
T  2040852 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 2040766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 6597077 - 6597123
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  6597077 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 6597123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 6603757 - 6603803
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  6603757 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 6603803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 11861208 - 11861334
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||||||    |||||||||| |||||||| ||| || |||||| | ||||  | |||||| || ||||||||||||||||| ||||| ||    
T  11861208 gcttgcaatcagctaaagtatgacccttcttaccacaccagaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccacaatt 11861307  T
Q  101 aaaacaaactatctcagcaggagcatc 127  Q
     ||| | || ||||| |||||||||||    
T  11861308 gaaatagacaatctccgcaggagcatc 11861334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 12889731 - 12889777
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  12889731 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 12889777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 13255712 - 13255758
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  13255712 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 13255758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 152
Target Start/End: Original strand, 14039676 - 14039762
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatca 152  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| |||||||| | || || ||||||||||||    
T  14039676 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 14039762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 15586500 - 15586454
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  15586500 ttgtcagcgggggcactgtacggcttaggacgactttgttgtccctt 15586454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 16638795 - 16638841
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  16638795 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16638841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 16753809 - 16753763
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  16753809 ttgtcagcgggggcactgtacggcttaggacgactatgctgtccctt 16753763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 23079228 - 23079166
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||| || ||||||||||||||||| ||||| ||||||||||| ||| |||||||||||||    
T  23079228 acaaacattgctcttgtggcctttctcaccacaattaaaacaaacaatcacagcaggagcatc 23079166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 43165697 - 43165743
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  43165697 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 43165743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 48428469 - 48428515
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  48428469 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 48428515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 23415001 - 23414861
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| |||||||||||||||||||||||| | || ||||| || ||||| |||||||||||  || | || |||| ||| |||||    | ||||||     
T  23415001 acaaacattactcttgtggcctttctcgccatagttgaaacagacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctgt 23414902  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgact 205  Q
     | ||||| |||||||||||||| || |||||||| |||||    
T  23414901 ttgcccttatcagcaggggcactataaggcttagggcgact 23414861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 15345358 - 15345307
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||| |||||||| ||||||||||||||||||||| |||| |||||||||||    
T  15345358 tacctttgtcagcgggggcactgtacggcttaggaggactctgctgtccctt 15345307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 15399623 - 15399580
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  15399623 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 15399580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 15713161 - 15713118
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  15713161 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 15713118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 12501788 - 12501914
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||||||   |||||||||||  ||||||| ||| || |||||  | ||||  | |||||| || ||||||||||||||||||||||| ||    
T  12501788 gcttgcaatcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcgccacaatt 12501887  T
Q  101 aaaacaaactatctcagcaggagcatc 127  Q
     |||||    |||||||||||| ||||    
T  12501888 gaaacaggtaatctcagcaggaacatc 12501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 15065990 - 15066052
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||| || ||||||||||||||||| ||||| |||||||| || ||| |||||||||||||    
T  15065990 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatcgcagcaggagcatc 15066052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 26790512 - 26790475
Alignment:
Q  180 ggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||| |||||||||||    
T  26790512 ggggcactgtacggcttaggacgactctgctgtccctt 26790475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 53382118 - 53382081
Alignment:
Q  180 ggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||| |||||||||||    
T  53382118 ggggcactgtacggcttaggacgactctgctgtccctt 53382081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 24186222 - 24186258
Alignment:
Q  181 gggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||||||||||||||||||||||| |||||||||||    
T  24186222 gggcactgtacggcttaggacgactctgctgtccctt 24186258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 12843307 - 12843168
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||||||||| |||||  || | || || |||||| ||||||||||| || |  | |||| |||||||||| | | ||||||  | ||||    
T  12843307 ttactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttcttcctaggccgcctctcatcaatcattctctgtttgccct 12843208  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||||||| ||||| ||  |||| |||||||| |||||    
T  12843207 tatcagcaggagcactataaagctttggacgactctgctg 12843168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 15359077 - 15359120
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||    
T  15359077 tcagcgggggcactgtacggcttagggcgactctgctgtccctt 15359120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 17497617 - 17497672
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||||||||||||||||| |||||  ||||||| || ||||| |||||||||||    
T  17497617 ttactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatc 17497672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 16695083 - 16695145
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||| ||||||||| |||||||||||||||| || ||||||   |||||||| ||||||||    
T  16695083 acaaacattactcttgcggcctttctcgccacaattgaaacaagtaatctcagctggagcatc 16695145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 254
Target Start/End: Complemental strand, 2245712 - 2245683
Alignment:
Q  225 cgctcactcatcaccttataatgagctttg 254  Q
    ||||||||||||||||||||||||||||||    
T  2245712 cgctcactcatcaccttataatgagctttg 2245683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 14873786 - 14873734
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    ||||| ||||||||||| ||||| |||||||| || ||||||||| |||||||    
T  14873786 ctcttatggcctttctcaccacaattaaaacagacaatctcagcatgagcatc 14873734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 208
Target Start/End: Original strand, 15262556 - 15262692
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| | ||||||||| |||||  || | || || |||||| ||||||||||| || |  |  |||||||||||||||| | ||| ||  ||||||    
T  15262556 ttactcttatagcctttctcaccacaagtatagcagacaatctcaacaggagcatctttccttctacgcctcctctcatcattcattctttgtttaccct 15262655  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttg 208  Q
    | |||||||| ||  |||| ||||| |||||||||||    
T  15262656 tatcagcaggagcgttgtaaggctttggacgactttg 15262692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 14144887 - 14145140
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  14144887 gcttgcaatcagctaacacgtgacccttttgaccacacctgaagcacttcttctcctccttggtacaaacgttactcttgtggcctttctcgccatactt 14144986  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    ||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14144987 aaaacaaactatctcagcaggagcatctctcctatatggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactgtacggcttagga 14145086  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14145087 cgactctgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 14145140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 18050976 - 18050717
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||| |||| || |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18050976 gcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacactt 18050877  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    ||| || |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||||||| ||||  || ||||| ||||| ||||||    
T  18050876 aaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggagcactatacggtttagga 18050777  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||| | || ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18050776 cgattctgatgtcccttacctcttcgctcactcatcaccttataatgagctttggtgtcc 18050717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 14283397 - 14283145
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14283397 gcttgcaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacactt 14283298  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| | ||||||||||||||||||| ||   ||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| ||     
T  14283297 gtaacaaacaacctcagcaggagcatctctcctaacgggcctcctctcatcattgagtctctgcttacccttatcagcaggggcactatacggcttcggg 14283198  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| ||||||||||||   |||| ||||||||||||||| |||||||||||    
T  14283197 cgactctgctgtcccttattccttctctcactcatcaccttgtaatgagcttt 14283145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 11385426 - 11385200
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  11385426 ttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaactatctcagcaggagcat 11385327  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||| ||||||||||| ||||  ||| | ||||||||||||||||||||||||||||||||| |||| || ||||||||||| || ||    
T  11385326 ctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggatgactctgttgtcccttacccctccg 11385227  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
    ||||||||||| ||| |||||||||||    
T  11385226 ctcactcatcatcttgtaatgagcttt 11385200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 24 - 253
Target Start/End: Complemental strand, 15099603 - 15099374
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    |||||||||||||||||||||||||||||||||||  |   ||||||||||||||||||||||||||| |||||||| || |||||||| |||| |||||    
T  15099603 cccttctgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggag 15099504  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    |||||||| | || ||||||||| ||||||| |  |||||| |||||||||||||||| ||||| |||||| | |||||||| ||||||||||| |||||    
T  15099503 catctctcctcttgggcctcctcccatcatttaacctctgcttacccttgtcagcaggagcactatacggcgtcggacgactctgctgtcccttgcctct 15099404  T
Q  224 tcgctcactcatcaccttataatgagcttt 253  Q
     ||||||||||||||||| |||||||||||    
T  15099403 acgctcactcatcaccttgtaatgagcttt 15099374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 12712684 - 12712437
Alignment:
Q  3 ttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaa 102  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  12712684 ttgcaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaa 12712585  T
Q  103 aacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacg 202  Q
    | |||||||||||| ||||||  |||||    || || || ||||||||||| ||||  ||| | |||||  ||||||| ||||||||||||||||||||    
T  12712584 agcaaactatctcaacaggagtgtctcttcccttgggtcttctctcatcattcagtcgttgctttcccttaccagcaggagcactgtacggcttaggacg 12712485  T
Q  203 actttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    ||| || |||||||| || || || ||||||||||||||  |||||||    
T  12712484 actctgttgtcccttgcccctccgttcactcatcaccttggaatgagc 12712437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 6 - 253
Target Start/End: Complemental strand, 12798519 - 12798275
Alignment:
Q  6 caatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaa 104  Q
    |||||||||||   ||| || |||||||||||||||||||||||||||||||| | ||| |||||| |||||||||||||||||    |||||||| |||    
T  12798519 caatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatc-tcggtcacaaacattactcttgtggcctttt---ccacacttgaaa 12798424  T
Q  105 caaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgac 204  Q
    ||||| || |||| | ||||||||||| | ||  |||||||||||||||| | ||||||| |||||||||||||||| ||||| |||||||| |||||||    
T  12798423 caaacaatatcagtatgagcatctctcctcttgagcctcctctcatcattcaatctctgcttacccttgtcagcaggagcactatacggcttcggacgac 12798324  T
Q  205 tttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    | ||||||||||| ||||| ||||||||||||||||| ||| |||||||    
T  12798323 tctgctgtcccttgcctctgcgctcactcatcaccttgtaaagagcttt 12798275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 19150237 - 19150490
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacact 99  Q
    ||||||||||||| ||   ||| || |||||||||||||| ||||||||||||| ||| | | | ||| || ||||| |||||||||||||| |||||||    
T  19150237 gcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatc-tcgatcacacacattactgttgtggcctttctcaccacact 19150335  T
Q  100 taaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagg 199  Q
    | || ||||| || |||| ||||||||||||| | || ||||||||||||||||| |  |||||| ||||||||||||||||||||||  ||||||| ||    
T  19150336 tgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgcttacccttgtcagcaggggcactaaacggcttcgg 19150435  T
Q  200 acgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
    |||||| ||||||||||||||| | ||||||||||||||||| ||||||||||||    
T  19150436 acgactctgctgtcccttacctatgcgctcactcatcaccttgtaatgagctttg 19150490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 20749636 - 20749889
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacact 99  Q
    ||||||||||||| ||   ||| || |||||||||||||| ||||||||||||| ||| | | | ||| || ||||| |||||||||||||| |||||||    
T  20749636 gcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatc-tcgatcacacacattactgttgtggcctttctcaccacact 20749734  T
Q  100 taaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagg 199  Q
    | || ||||| || |||| ||||||||||||| | || ||||||||||||||||| |  |||||| ||||||||||||||||||||||  ||||||| ||    
T  20749735 tgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgcttacccttgtcagcaggggcactaaacggcttcgg 20749834  T
Q  200 acgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
    |||||| ||||||||||||||| | ||||||||||||||||| ||||||||||||    
T  20749835 acgactctgctgtcccttacctatgcgctcactcatcaccttgtaatgagctttg 20749889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 16947469 - 16947243
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||| |  |||||| |||||||  |   |||| | ||||||||||||||||| || ||||||||  ||||||| || ||| | |||||||    
T  16947469 ttctgaccacacctaacacacttcctctcatctctaccacaagcattactcttgtggcctttttcaccacacttgtaacaaacaatttcaactggagcat 16947370  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||| ||||||||||| | ||||||| | ||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||||     
T  16947369 ctctcctcttgggccttctctcatcattcattctctgctttcccttgtcagcaggggcactgtatggtttaggacgactctgctgtcccttaccccttct 16947270  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
    ||||||||||||||| |||||||||||    
T  16947269 ctcactcatcaccttgtaatgagcttt 16947243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 72 - 253
Target Start/End: Complemental strand, 14261198 - 14261017
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||||||||| |||||||| || ||||  ||||||| |||||||| ||||   || ||||||||||||||||| ||||||| | ||||||    
T  14261198 ttactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatatctccccttaggcctcctctcatcattcagtctctacttaccct 14261099  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    |||||||||||||||| |||||||| |||||||| | ||||||||||||| | |||||||| |||||||| |||||||||||    
T  14261098 tgtcagcaggggcactatacggcttcggacgactctactgtcccttacctttgcgctcactgatcaccttgtaatgagcttt 14261017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 26091821 - 26091563
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  26091821 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 26091722  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| |||||||||||||| | || |||||||| ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||    
T  26091721 gtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttagga 26091622  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | |||||||||||||| || | ||||||||| | ||| |||||||||||| ||||    
T  26091621 cgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtc 26091563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 26115613 - 26115355
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  26115613 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 26115514  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| |||||||| |||||||||||| | || |||||||| |||||| | |   ||||| | || ||||||||||| |||||||| |||||||||    
T  26115513 gtaacaaacaatctcagccggagcatctctcctcttgggcctcctatcatcactcatcttctgctttcctttgtcagcaggagcactgtaaggcttagga 26115414  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | || | ||||||||| || | ||||||||| | ||| |||||||||||| ||||    
T  26115413 cgattctgttatcccttacccctcctctcactcattatcttgtaatgagctttggtgtc 26115355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 40924840 - 40924582
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  40924840 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 40924741  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| |||||||||||||| | || |||||||| ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||    
T  40924740 gtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttagga 40924641  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | || ||||||||||| || | ||||||||| | |||||||||||||||| ||||    
T  40924640 cgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtc 40924582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 259
Target Start/End: Original strand, 21755657 - 21755896
Alignment:
Q  20 gtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagca 119  Q
    |||||||||||||||||||||||| |||||| ||||||| ||   |||||| || |||||||||||||| || ||||||||  ||||||| |||||||      
T  21755657 gtgacccttctgaccacacctgaaacacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagag 21755756  T
Q  120 ggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttac 219  Q
    |||||||||||| | || |||||| | |||||| | |   ||||| | || ||||||||||| |||||||| |||||||||||| |||| ||||||||||    
T  21755757 ggagcatctctcctcttaggcctcatgtcatcactcatattctgctttcctttgtcagcaggagcactgtaaggcttaggacgattttgttgtcccttac 21755856  T
Q  220 ctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    | || | ||||||||| | ||| |||||||||||||||||    
T  21755857 ccctcctctcactcattatcttgtaatgagctttgatgtc 21755896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 21 - 259
Target Start/End: Original strand, 49155547 - 49155785
Alignment:
Q  21 tgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcag 120  Q
    |||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| |||    
T  49155547 tgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacag 49155646  T
Q  121 gagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    ||||||||||| | || |||||||| || |||   |  |||||| | || ||||||||||| |||||||| |||||||||||| | || |||||||||||    
T  49155647 gagcatctctcctcttgggcctcctatcctcacccatcctctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacc 49155746  T
Q  221 tcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
     || | ||||||||| | |||||||||||||||| ||||    
T  49155747 cctcctctcactcataatcttataatgagctttggtgtc 49155785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 12459877 - 12460106
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    ||||||||||||||||| || || ||| |||||||  |   |||| | || |||||||||||||| || ||||||||  |||| || ||||||||||||     
T  12459877 cccttctgaccacacctaaaacatttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaa 12459976  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    |||||||| | || |||||||| |||||||| | | ||||| | |||||||||||| | ||| |||| |||||||||||||| |||||||||||||| ||    
T  12459977 catctctcctcttgggcctcctatcatcattcattttctgctttcccttgtcagcaagagcattgtaaggcttaggacgactctgctgtcccttacccct 12460076  T
Q  224 tcgctcactcatcaccttataatgagcttt 253  Q
     | ||||||||||||||| |||||||||||    
T  12460077 cctctcactcatcaccttgtaatgagcttt 12460106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 13676677 - 13676899
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||| |||||||||||   ||| |||||||| |||||||||||| ||||||||||||| ||   |||||| |||||||||||||||||||  ||||||||    
T  13676677 gcttacaatcagctaatgtgtgtcccttctgtccacacctgaagtacttcttctcatctttatcacaaacattactcttgtggcctttcttaccacactt 13676776  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| |||||||||||||| | || ||||||||||||||||| |  |||||  | || ||||||||||| ||||| ||||| ||||||    
T  13676777 gtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattcaacctctgttttcctttgtcagcaggagcactatacggtttagga 13676876  T
Q  201 cgactttgctgtcccttacctct 223  Q
     |||| |||||||  ||||||||    
T  13676877 tgactctgctgtcatttacctct 13676899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 78 - 259
Target Start/End: Original strand, 13024647 - 13024828
Alignment:
Q  78 ttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcag 177  Q
    ||||||||||| || ||||||||  ||||||| || |||||||||||||||||| | || |||||||| |||||||| |  |||||| | || |||||||    
T  13024647 ttgtggcctttttcaccacacttgtaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgcttccctttgtcag 13024746  T
Q  178 caggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    |||| |||||||| || ||||||||| | | |||||||||||| || | ||||||||||||||| |||||||||||| ||||    
T  13024747 caggagcactgtaaggtttaggacgattctactgtcccttacccctcctctcactcatcaccttgtaatgagctttggtgtc 13024828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 20 - 259
Target Start/End: Complemental strand, 13965672 - 13965433
Alignment:
Q  20 gtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagca 119  Q
    ||||||||||||||||||||||||||| ||  | ||||| ||   |||||| |||||||||||| ||||||| ||||||||  | ||| | |||||||||    
T  13965672 gtgacccttctgaccacacctgaagcattttctatcatctttaccacaaacattactcttgtggtctttctcaccacacttgtagcaatcaatctcagca 13965573  T
Q  120 ggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttac 219  Q
    |||||||||||| | || |||||||| ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||||| | || ||||||||||    
T  13965572 ggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattatgttgtcccttac 13965473  T
Q  220 ctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    | || | ||||||||| | ||  |||||||||||| ||||    
T  13965472 ccctcctctcactcattatctggtaatgagctttggtgtc 13965433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 250
Target Start/End: Original strand, 13004783 - 13004940
Alignment:
Q  93 ccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacg 192  Q
    ||||||||||| |||||||||||||||||||  |||||    || || || ||||||||||| ||||  ||| | |||||| |||||||||| |||||||    
T  13004783 ccacacttaaagcaaactatctcagcaggagtgtctcttcccttgggtcttctctcatcattcagtcgttgctttcccttgccagcaggggcgctgtacg 13004882  T
Q  193 gcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    ||||||||||||| || |||||||| || || || |||||||||||||| ||||||||    
T  13004883 gcttaggacgactctgttgtcccttgcccctccgttcactcatcaccttgtaatgagc 13004940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 254
Target Start/End: Complemental strand, 12203760 - 12203570
Alignment:
Q  64 tacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctg 163  Q
    ||||||| |||||||||||||| ||||| ||||||||  | ||||| ||| |||||||| |||||||| | || || |||||||||||||| | ||| ||    
T  12203760 tacaaacattactcttgtggcccttctcaccacacttgtagcaaacaatcacagcaggaacatctctcctcttaggtctcctctcatcattcaatctttg 12203661  T
Q  164 cctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcc-ct-tacctcttcgctcactcatcaccttataatgagctttg 254  Q
      | || ||||||||||| |||||||| ||||||||||||| |||||| || || | ||||||  ||||||||| |||||||||||| |||||    
T  12203660 tttccctttgtcagcaggagcactgtagggcttaggacgaccttgctggcctctgttcctctt--ctcactcataaccttataatgaactttg 12203570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 63 - 253
Target Start/End: Original strand, 15627811 - 15628001
Alignment:
Q  63 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 162  Q
    |||||| |||||||||||||||||||||| ||||| ||  | ||||| |  |||||||||| |||| || |  | |||||| |||||||||| |  || |    
T  15627811 gtacaagcgttactcttgtggcctttctcaccacagttgtagcaaacaacttcagcaggagtatctttctttctaggcctcttctcatcattcacccttt 15627910  T
Q  163 gcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    |  ||||||| |||||||| |||||||| ||||| ||||||||||| || | ||||| | | | |||| |||| ||||| |||||||||||    
T  15627911 gtttacccttatcagcaggagcactgtaaggctttggacgactttgttgactcttacttttcctctcattcataaccttgtaatgagcttt 15628001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 217
Target Start/End: Original strand, 9591653 - 9591805
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| || ||||||||||||||||||||||| || ||||| || ||||| |||||||||||  || | || |||| ||| ||||||   | |||||||    
T  9591653 acaaacattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagcatccttcttcttaggccgcctatcatcaaccattctctgc 9591752  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
     | ||||| ||| |||||||||| || |||||||| ||||| ||||| |||||    
T  9591753 ttgcccttatcaacaggggcactataaggcttagggcgactctgctggccctt 9591805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 12690896 - 12690939
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  12690896 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 12690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 15157932 - 15157889
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  15157932 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 15157889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 8710997 - 8711043
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  8710997 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 8711043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 10873853 - 10873897
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccc 215  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  10873853 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccc 10873897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 11234088 - 11234045
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  11234088 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 11234045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 11549977 - 11549934
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  11549977 tcagcaggggcactgtacggcttaggacgactctgttgtccctt 11549934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 44788226 - 44788183
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||| ||||||||||||||||||||||||||| |||||||||||    
T  44788226 tcagtaggggcactgtacggcttaggacgactctgctgtccctt 44788183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 14335788 - 14335834
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||||    
T  14335788 ttgtcagcgggggcattgtacggcttaggacgactctgctgtccctt 14335834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 16726422 - 16726360
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||| |||||||||||||||||| ||||||| || |||||||| || || |||||||||||    
T  16726422 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 16726360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 17703436 - 17703374
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||| |||||||||||||||||| ||||||| || |||||||| || || |||||||||||    
T  17703436 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 17703374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 18587049 - 18587003
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||||    
T  18587049 ttgtcagcgggggcattgtacggcttaggacgactctgctgtccctt 18587003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 13689436 - 13689479
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||| ||||||||||||||||||||||||||| || ||||||||    
T  13689436 tcagtaggggcactgtacggcttaggacgactctggtgtccctt 13689479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 14957903 - 14957946
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||  | |||||||||    
T  14957903 tcagcaggggcactgtacggcttaggacgaccctactgtccctt 14957946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 217
Target Start/End: Original strand, 11984279 - 11984433
Alignment:
Q  63 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 162  Q
    |||||||| || ||||||||||||||||| ||||| || ||||||   |||||||| ||||||||  || | || ||||  || |||||    | |||||    
T  11984279 gtacaaacattgctcttgtggcctttctcaccacaattgaaacaagtaatctcagctggagcatccttcttcttaggccgtctatcatcgaccattctct 11984378  T
Q  163 gcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |  | ||||| |||||||||||||| || |||||||| ||||| ||||| |||||    
T  11984379 gtttgcccttatcagcaggggcactatagggcttagggcgactctgctggccctt 11984433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 18181138 - 18181184
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    ||||| ||||||||||||||||||||| |||| || |||||||||||    
T  18181138 tcagcgggggcactgtacggcttaggaagactctgttgtcccttacc 18181184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 22054165 - 22054424
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22054165 gcttgcaatccgctaaaaggtgacccttctgaccacatctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacactt 22054264  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  22054265 aaaacaaactatctcagcagaagcatctctcctattcggcctcctctcatcattaagtctctgcttacccttatcagcaggggcactgtacggcttagga 22054364  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22054365 cgactctgccgtcccttacctcttcgctcactcatcaccttataatgagctttggtgtcc 22054424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 6 - 253
Target Start/End: Complemental strand, 22027754 - 22027507
Alignment:
Q  6 caatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaac 105  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||  |||    
T  22027754 caatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcatctttggtacaaacattactcttgtggcctttatcgccacacttgtaac 22027655  T
Q  106 aaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgact 205  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| | ||| ||| | |||||||||||||||||||||||||| |||||||||||    
T  22027654 aaactatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctttgctttcccttgtcagcaggggcactgtacggtttaggacgact 22027555  T
Q  206 ttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
     |||||||||||||| ||||||||||||||||||||||||||| ||||    
T  22027554 ctgctgtcccttaccacttcgctcactcatcaccttataatgatcttt 22027507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 27 - 259
Target Start/End: Complemental strand, 31413985 - 31413753
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||| || |||||| |||||||  |   |||| | || ||||| |||||||| || |||||||| |||||||| || ||| |||||||||    
T  31413985 ttctgaccacacctaaaacacttcctctcatctctaccacaagcattgctcttatggcctttttcaccacacttgaaacaaacaatttcaacaggagcat 31413886  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| | ||||||| | ||||||||||||||||| ||||| || ||||||||||| |||||||||||||| |||||    
T  31413885 ctctcctcttgggcctcctctcatcattcattctctgctttcccttgtcagcaggggcgctgtaaggtttaggacgactctgctgtcccttaccccttcg 31413786  T
Q  227 ctcactcatcaccttataatgagctttgatgtc 259  Q
    |||||||||||  || |||||||||||| ||||    
T  31413785 ctcactcatcattttgtaatgagctttggtgtc 31413753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 254
Target Start/End: Original strand, 19985483 - 19985735
Alignment:
Q  2 cttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactta 101  Q
    |||||||||||||||   ||| |  ||||| ||||| |||||  |||||||||||||   |  ||| || ||||||||||||| ||| |||||||||||     
T  19985483 cttgcaatcagctaatgtgtgtcatttctgtccacatctgaaatacttcttctcatcacggtcacatacattactcttgtggcttttttcgccacacttg 19985582  T
Q  102 aaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggac 201  Q
    |||||||| ||||||| ||||||||||||| | || ||||||||||||||| | |  |||||  |||||||||| ||||||||||| |||||||| ||||    
T  19985583 aaacaaacaatctcagtaggagcatctctcctcttaggcctcctctcatcaatcatcctctgtttacccttgtccgcaggggcactatacggcttcggac 19985682  T
Q  202 gactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
    |||| |||| |||||| || || ||||||||||||||||| ||||||||||||    
T  19985683 gactctgctatcccttgccactgcgctcactcatcaccttgtaatgagctttg 19985735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 21 - 259
Target Start/End: Complemental strand, 16268683 - 16268445
Alignment:
Q  21 tgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcag 120  Q
    |||||||||||||||||||||||||||||| ||||||| ||   |||||| |||||||||||||||||||| ||||||||  ||||||| ||||||| ||    
T  16268683 tgacccttctgaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagaag 16268584  T
Q  121 gagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    ||||||||||| | || |||||||| |||||| | |   ||||| | || ||||||||| | |||||||| |||||||||||| | || |||||||||||    
T  16268583 gagcatctctcttcttaggcctcctgtcatcactcatcttctgctttcctttgtcagcaagagcactgtaaggcttaggacgattctgttgtcccttacc 16268484  T
Q  221 tcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
     || | ||||||||| |  || |||||||||||| ||||    
T  16268483 cctcctctcactcattatattgtaatgagctttggtgtc 16268445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 28984213 - 28984471
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  28984213 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 28984312  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| |||||| | |||||||||||| | || |||||||| ||||||   |  |||||| | |||||||| ||||| |||||||| |||||||||    
T  28984313 gtaacaaacaatctcaactggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcccttgtccgcaggagcactgtaaggcttagga 28984412  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | || ||||||||||| || | ||||||||| | ||| |||||||||||| ||||    
T  28984413 cgattctgttgtcccttacccctcctctcactcataatcttgtaatgagctttggtgtc 28984471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 27 - 254
Target Start/End: Original strand, 21928756 - 21928983
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagca 125  Q
    ||||| ||||| ||||| |||||||||||||| | ||| ||  || ||||||| |||||| || ||||||||||| |||||||  ||||||| |||||||    
T  21928756 ttctgtccacatctgaaacacttcttctcatc-tcggtcacttacattactctcgtggcccttttcgccacacttgaaacaaagaatctcagtaggagca 21928854  T
Q  126 tctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttc 225  Q
    |||||| |  | ||||||||||||||||| || |||||  | || ||||||||||| ||||| ||||| ||||||||||| || |||||||||||||| |    
T  21928855 tctctcctcctaggcctcctctcatcattcagcctctgttttcctttgtcagcaggagcactatacggtttaggacgactctgttgtcccttacctctac 21928954  T
Q  226 gctcactcatcaccttataatgagctttg 254  Q
    |||||||||||||||| ||||||||||||    
T  21928955 gctcactcatcaccttgtaatgagctttg 21928983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 22374171 - 22374423
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||||||   ||| || ||||  |||||||| || |||||||| |||||   |  ||| || |||||||||||| |||| || ||||||||    
T  22374171 gcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttttcatcacggtcacatacattactcttgtggtctttttcaccacactt 22374270  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
     ||||| || ||||||| ||||| ||||||| |  | ||||||||||| ||||||||||| ||  |||| ||| ||||||||||||| ||||| || |||    
T  22374271 gaaacagacaatctcagtaggagaatctctcctcctaggcctcctctcctcattaagtctttgtttacctttgacagcaggggcactatacggtttcgga 22374370  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| | ||||||||||||||| |||||||||||||||||||||||||||||    
T  22374371 cgactctactgtcccttacctctgcgctcactcatcaccttataatgagcttt 22374423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 75 - 253
Target Start/End: Complemental strand, 29300831 - 29300653
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgt 174  Q
    |||||||||||| | || ||||||||||||||||| || ||||| ||| |||||| | | || |||||||| |||||||| |   ||||| | || ||||    
T  29300831 ctcttgtggcctctttcaccacacttaaaacaaacaatttcagcgggaacatctcccctcttgggcctcctatcatcattcatcttctgcttccctttgt 29300732  T
Q  175 cagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||||| |||||||| || ||||||||||| |  ||||||||||| || | ||||||||| ||||| |||||||||||    
T  29300731 cagcaggagcactgtaaggtttaggacgactctaatgtcccttacccctcctctcactcattaccttgtaatgagcttt 29300653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 254
Target Start/End: Original strand, 20391454 - 20391641
Alignment:
Q  67 aaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcct 166  Q
    |||| |||||||||||||| ||||| ||||||||  | ||||| ||||||| |||| |||||||  | || || |||||||||||||| | ||| ||  |    
T  20391454 aaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagaaggaacatctctactcttaggtctcctctcatcattcaatctttgttt 20391553  T
Q  167 acccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
     || ||||||||||| |||||||| ||||| ||||||| |||||| || ||    || ||||||||||| ||||||||||||||||||    
T  20391554 ccctttgtcagcaggagcactgtagggcttcggacgaccttgctgacctttgttcctccgctcactcataaccttataatgagctttg 20391641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 22523883 - 22524041
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||| |||||||||||||||||||  || | || || |||||| ||||||||||| || |  | |||| |||||||||||||| ||| ||  | ||||    
T  22523883 ttactcctgtggcctttctcgccacaagtatagcacacaatctcaacaggagcatctttcttcctaggccgcctctcatcattaactctttgttttccct 22523982  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctca 230  Q
    | ||||||||||||||||| ||||| |||||||| ||||| || || ||| ||||||||    
T  22523983 tatcagcaggggcactgtaaggctttggacgactctgctgacctttgccttttcgctca 22524041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 19481389 - 19481335
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  19481389 tacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttacc 19481335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 217
Target Start/End: Complemental strand, 30310559 - 30310407
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| |||||||||||||||||||||||||| || |||||||| || || |||||||||||  || | || |||| ||| |||||    | ||||||     
T  30310559 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatatccgcaggagcatccttcttctttggccgcctatcatcgaccattctctgt 30310460  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
     | ||||| |||||||||||||| || || ||||| ||||| ||||| |||||    
T  30310459 ttgcccttatcagcaggggcactataaggtttagggcgactctgctgaccctt 30310407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 17671339 - 17671288
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  17671339 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 17671288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 19115872 - 19115915
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  19115872 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 19115915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 20015572 - 20015529
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  20015572 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 20015529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 22117478 - 22117441
Alignment:
Q  180 ggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22117478 ggggcactgtacggcttaggacgactttgctgtccctt 22117441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 217
Target Start/End: Original strand, 15536749 - 15536901
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| ||||||||||||||||  |||||||| ||||||||||  ||||| | |||||||||  || | || |||| ||| |||||    | |||||||    
T  15536749 acaaacattactcttgtggccttcttcgccacaattaaaacaaataatctccgaaggagcatccttcttcttaggccgcctatcatcgaccattctctgc 15536848  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
     | ||||| || ||||||||||| || |||||||| ||||| ||||| |||||    
T  15536849 ttgcccttatcggcaggggcactataaggcttagggcgactctgctggccctt 15536901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 21163935 - 21163883
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    ||||||||| ||||||||||||| |||||||| || |||||||||||||||||    
T  21163935 ctcttgtggtctttctcgccacaattaaaacagacaatctcagcaggagcatc 21163883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 18860049 - 18860092
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  18860049 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 18860092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 21391269 - 21391214
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||||||||||||||||| |||||   ||||||||| |||||||||||||||||    
T  21391269 ttactcttgtggcctttctcaccacaagaaaaacaaacaatctcagcaggagcatc 21391214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 21780595 - 21780540
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||||||||||||||||| |||||   ||||||||| |||||||||||||||||    
T  21780595 ttactcttgtggcctttctcaccacaagaaaaacaaacaatctcagcaggagcatc 21780540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 22126268 - 22126225
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  22126268 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 22126225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 32603511 - 32603664
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| |||||||||||||||||| | ||||| || |||||||| || || | |||||||||  || | || || | ||| |||||    | |||||||    
T  32603511 acaaacattactcttgtggcctttcccaccacagttgaaacaaacaatttccgaaggagcatccttcttcttaggtcgcctatcatcgaccattctctgc 32603610  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 218  Q
     | ||||| |||||||||||||| || |||||||| ||||| ||||| ||||||    
T  32603611 ttgcccttatcagcaggggcactataaggcttagggcgactctgctggccctta 32603664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 154
Target Start/End: Complemental strand, 6606883 - 6606795
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcatt 154  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| ||||||| |||| |||||||  | || || ||||||||||||||    
T  6606883 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcatt 6606795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 21671982 - 21672033
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||||| |||||||| |||||||| |||||||||||||| ||||| |||||    
T  21671982 tacccttatcagcaggagcactgtaaggcttaggacgactctgctgaccctt 21672033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 3274550 - 3274629
Alignment:
Q  143 cctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    |||||||||||| |  ||||||  |||||| || ||||| |||||||| ||||| |||||||||||||| || ||||||||    
T  3274550 cctctcatcattcaccctctgctcacccttatc-gcaggagcactgtaaggctttggacgactttgctggcctttacctct 3274629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 207; Significance: 1e-113; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 2 - 260
Target Start/End: Original strand, 203647 - 203905
Alignment:
Q  2 cttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactta 101  Q
    ||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  203647 cttgcaatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacactta 203746  T
Q  102 aaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggac 201  Q
    ||||||||||||||| |||||||||||||| ||   ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  203747 aaacaaactatctcaccaggagcatctctcctaacgggcctcctctcatcattcagtctctgcttacccttgtcagcaggggcactgtacggcttaggac 203846  T
Q  202 gactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  203847 gactctgctgtcccttacctcttcgctcactcatcaccttataatgagctttggtgtcc 203905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 424746 - 424822
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||  | |||||| ||| || ||| ||||||||    
T  424746 tcagcaggggcattgtacggcttaggacgactatgctgtcccttgcccttccgctcattcaccatcttgtaatgagc 424822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 6296 - 6037
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6296 gcttacaatcagctagcacgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 6197  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    |||||||||||||||  |||||||||||||| |||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||    
T  6196 aaaacaaactatctcgacaggagcatctctcctattcggcctcctctcatcattcagtctttgcttacccttgtcagcaggggcactgtacggcttagga 6097  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||||| || ||||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  6096 cgactctgttgtcccttacctcttcgttcactcatcactttataatgagctttggtgtcc 6037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 2 - 260
Target Start/End: Original strand, 263492 - 263750
Alignment:
Q  2 cttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactta 101  Q
    ||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  263492 cttgcaatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacactta 263591  T
Q  102 aaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggac 201  Q
    |||||||||||||||||||||||||||||| ||   ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||    
T  263592 aaacaaactatctcagcaggagcatctctcctaacgggcctcctctcatcattcagtctctgcttacccttgtcagcaggggcactgtacggcttaagac 263691  T
Q  202 gactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  263692 gactctgctgtcccttacctcttcgctcactcatcaccttataatgaactttggtgtcc 263750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 9826 - 9567
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9826 gcttgcaatccgctaaaaggtgacccttctaaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacactt 9727  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    ||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  9726 aaaacaaactatctcagcaggagcatctctcctaacgggcctcctctcatcattaagtctcagcttacccttatcagcaggggcactgtacggcttagga 9627  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9626 cgactctgttgtcccttacctcttcgctcactcatcaccttataatgagctttggtgtcc 9567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 17266552 - 17266293
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||| |||| || |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  17266552 gcttgcaatcggctagcatgtgacccttctgtccacacctgaagcacttcttctcatcctcggtacaaacgttactcttgtgacctttctcgccacactt 17266453  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    |||||| |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  17266452 aaaacacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactatacggtttagga 17266353  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||||| || || || ||||||||||||||||||||||||||||||||||||||| |||||    
T  17266352 cgactctgatgccctttacctcttcgctcactcatcaccttataatgagctttggtgtcc 17266293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 65 - 254
Target Start/End: Complemental strand, 21870432 - 21870243
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| |||||||||||| ||||||| |||||||| || |||| |||||||| ||||||||||||| | || ||||||||| ||||||| | | |||||    
T  21870432 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgc 21870333  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
     |||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  21870332 ttacccttgtcagcaggggcactatacggcttcggacgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttg 21870243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 65 - 254
Target Start/End: Complemental strand, 21874712 - 21874523
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| |||||||||||| ||||||| |||||||| || |||| |||||||| ||||||||||||| | || ||||||||| ||||||| | | |||||    
T  21874712 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgc 21874613  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
     |||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  21874612 ttacccttgtcagcaggggcactatacggcttcggacgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttg 21874523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 22505856 - 22506087
Alignment:
Q  28 tctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    ||||||||||||||||||||||| |||| || ||   |||||| || ||||||||||||||||| ||||||||  ||||||| ||||||| |||||||||    
T  22505856 tctgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatc 22505955  T
Q  128 tctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgc 227  Q
    |||| | || |||||||| |||||||| |   ||||| | || ||||||||||| |||||||| |||||||||||| | |||||||||||||| || | |    
T  22505956 tctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctc 22506055  T
Q  228 tcactcatcaccttataatgagctttgatgtc 259  Q
    |||||||| | |||||||||||||||| ||||    
T  22506056 tcactcattatcttataatgagctttggtgtc 22506087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 23563360 - 23563134
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||||||||||||||||||  |   ||| || ||||||||||||||||| || |||||||| || ||||| || |||| ||||||||    
T  23563360 ttctgaccacacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaggagcat 23563261  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||| ||| |  |||||| || |||| |||||||| ||||| |||||||| |||| ||| | ||||||||||||||| ||    
T  23563260 ctctcctcttgggcctcctctcattatttaacctctgcttatccttttcagcaggagcactatacggcttcggacaactcttctgtcccttacctctacg 23563161  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     |||||||||| ||| |||||||||||    
T  23563160 ttcactcatcatcttgtaatgagcttt 23563134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 259
Target Start/End: Complemental strand, 14884190 - 14883951
Alignment:
Q  20 gtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagca 119  Q
    ||||||||||||||||||||||||||||||| | |||||  |   ||| || |||||||||||||||||||| ||||||||  ||||||| ||||||||     
T  14884190 gtgacccttctgaccacacctgaagcacttcctatcatctctcccacagacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagct 14884091  T
Q  120 ggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttac 219  Q
    |||||||||||| | || |||||||| ||||||   |  |||||| | || ||||||| ||| |||||||| |||||||||||| | || ||||||||||    
T  14884090 ggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcctttgtcagtaggagcactgtaaggcttaggacgattctgttgtcccttac 14883991  T
Q  220 ctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    | || | ||||||||| | |||||||||||||||| ||||    
T  14883990 ccctcctctcactcataatcttataatgagctttggtgtc 14883951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 259
Target Start/End: Original strand, 20345451 - 20345690
Alignment:
Q  20 gtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagca 119  Q
    ||||||||||||||||||||||||||||||| | ||||| ||   |||||| |||||||||||| ||||||| ||||||||  ||||||| |||||||||    
T  20345451 gtgacccttctgaccacacctgaagcacttcctatcatctttaccacaaacattactcttgtgggctttctcaccacacttgtaacaaacaatctcagca 20345550  T
Q  120 ggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttac 219  Q
    |||||||||||| | || |||||||| ||||||   |   ||||| | || ||||||||||| ||||| || |||||||||||| | | |||||||||||    
T  20345551 ggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactataaggcttaggacgattctactgtcccttac 20345650  T
Q  220 ctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    | || | ||||||||| | ||| |||||||||||| ||||    
T  20345651 ccctcctctcactcattatcttgtaatgagctttggtgtc 20345690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 259
Target Start/End: Original strand, 25851241 - 25851480
Alignment:
Q  20 gtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagca 119  Q
    ||||||||||||||||||||||||||||||| | ||||| ||   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| ||    
T  25851241 gtgacccttctgaccacacctgaagcacttcctatcatctttaccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaaca 25851340  T
Q  120 ggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttac 219  Q
     ||||||||||| | || |||||||| ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||||| | |||||||||||||    
T  25851341 agagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttac 25851440  T
Q  220 ctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    | || | ||||||||| | ||| |||||||||||| ||||    
T  25851441 ccctcctctcactcattatcttgtaatgagctttggtgtc 25851480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 27 - 259
Target Start/End: Complemental strand, 23078097 - 23077865
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||| || ||| |||||||  |   |||| | || || ||||||||||| || |||||||| ||||| || ||||||||||||||||    
T  23078097 ttctgaccacacctgaaacatttcctctcatctctaccacaagcattgcttttgtggcctttttcaccacacttgaaacatacaatctcagcaggagcat 23077998  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || |||||||| |||||||| |   ||||| | || ||||||||||| |||||||| || ||||||||||| |||||||||||||| || |     
T  23077997 ctctcctcttgggcctcctatcatcattcatcttctgcttccctttgtcagcaggagcactgtaaggtttaggacgactctgctgtcccttacccctcct 23077898  T
Q  227 ctcactcatcaccttataatgagctttgatgtc 259  Q
    ||||||||| ||||| |||||||||||| ||||    
T  23077897 ctcactcattaccttgtaatgagctttggtgtc 23077865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 253
Target Start/End: Complemental strand, 21983324 - 21983143
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||| ||||| |||||| || | ||||| |||||||||||| |||||||  | || || |||||||||||||| | ||| ||| | || |    
T  21983324 ttactcttgtggcccttctcaccacacctatagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgcttccctt 21983225  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||||||||  ||||||| ||||| ||||||| |||||| || ||    || ||||||||||| | |||||||||||||||    
T  21983224 tgtcagcaggaacactgtagggcttcggacgaccttgctgacctttgttcctccgctcactcataaacttataatgagcttt 21983143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 27521741 - 27521790
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27521741 ttgtcagcaggggcactgtacggcttaggacgactctgctgtcccttacc 27521790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 21561172 - 21561033
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||| ||||  |||||||| || ||||| |||||||||||| |||||||  | || || |||||||||||||| | ||| ||  | || |    
T  21561172 ttactcttgtggcccttcttaccacacttgaagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgtttccctt 21561073  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    |||||||||  |||||||| ||||| ||||||| ||||||    
T  21561072 tgtcagcagtagcactgtagggcttcggacgaccttgctg 21561033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 217
Target Start/End: Original strand, 23669847 - 23669998
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcc 165  Q
    ||||| |||||||||||||||||||| |||||||   |  |||| ||||||||||||||||||||| | || || |||||||||||||| | ||| |||     
T  23669847 caaacattactcttgtggcctttctcaccacactggtaggaaacaatctcagcaggagcatctctcctcttaggtctcctctcatcattcaatctttgct 23669946  T
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
      || |||||| |||| |||||||| ||||| || |||| ||| || |||||    
T  23669947 ctcctttgtcaacaggagcactgtagggcttcggtcgaccttgttgaccctt 23669998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 18782346 - 18782408
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||| |||||||||||||||||||||||||| || |||||||| ||||| |||||||||||    
T  18782346 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 18782408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 250
Target Start/End: Original strand, 23474499 - 23474611
Alignment:
Q  138 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatca 237  Q
    ||||||||||||||||| | ||| ||| ||||||| |||||||| ||| |||| ||||| |||||||||||||| ||||| ||| | | |||| |||  |    
T  23474499 ggcctcctctcatcattcaatctttgcttacccttatcagcaggagcaatgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaa 23474598  T
Q  238 ccttataatgagc 250  Q
    |||| ||||||||    
T  23474599 ccttgtaatgagc 23474611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 14996787 - 14996744
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  14996787 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 14996744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 22138006 - 22138049
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  22138006 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 22138049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 22329935 - 22329892
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  22329935 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 22329892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 27665559 - 27665508
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  27665559 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 27665508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 27682448 - 27682405
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  27682448 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 27682405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 40712110 - 40712161
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  40712110 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 40712161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 16258189 - 16258103
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatca 152  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| |||||||| | || || ||||||||||||    
T  16258189 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 16258103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 16359837 - 16359883
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  16359837 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16359883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 22591908 - 22591822
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatca 152  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| |||||||| | || || ||||||||||||    
T  22591908 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 22591822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 22595463 - 22595377
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatca 152  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| |||||||| | || || ||||||||||||    
T  22595463 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 22595377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 34569829 - 34569875
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  34569829 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 34569875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 23526293 - 23526345
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    ||||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  23526293 ctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 23526345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 19773298 - 19773341
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  19773298 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 19773341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 218
Target Start/End: Original strand, 21883017 - 21883160
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgt 174  Q
    ||||||||||||||||||||||| |||||||| || |||||||||| | ||||| || |  ||||||  || || ||    | ||||||  | ||||| |    
T  21883017 ctcttgtggcctttctcgccacaattaaaacagacaatctcagcagaaacatctttcttcctcggccgtctatcctcgaccattctctgtttgcccttat 21883116  T
Q  175 cagcaggggcactgtacggcttaggacgactttgctgtccctta 218  Q
    ||||||||||||| || |||||||| ||||| ||||| ||||||    
T  21883117 cagcaggggcactatagggcttagggcgactctgctggccctta 21883160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 27613694 - 27613737
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  27613694 tcagcaggggcactgtacggcttaggacgactctgttgtccctt 27613737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 41774180 - 41774223
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  41774180 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 41774223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 20779063 - 20779147
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcc 85  Q
    ||||||| ||||| ||||  |||||||||||||| || ||||| || ||||||||||| | ||| ||| | ||||||||||||||    
T  20779063 gcttgcattcagccaacacatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcc 20779147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 211
Target Start/End: Complemental strand, 21332125 - 21331997
Alignment:
Q  83 gcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggg 182  Q
    |||||||||||||||  || | || || |||||| || |||||||| || |  | ||||| ||||||||||||| ||| ||  | ||||| ||||||||     
T  21332125 gcctttctcgccacaagtatagcacacaatctcaacatgagcatctttctttctaggccttctctcatcattaactctttgttttcccttatcagcagga 21332026  T
Q  183 gcactgtacggcttaggacgactttgctg 211  Q
    |||||||| ||||| |||||||| |||||    
T  21332025 gcactgtaaggctttggacgactctgctg 21331997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 211
Target Start/End: Complemental strand, 21631555 - 21631407
Alignment:
Q  63 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 162  Q
    |||||| | |||||| ||||||||||||| |||||  |  | ||||| | |||||||| || |||| || |  | ||||||||| ||||||| |  || |    
T  21631555 gtacaagcattactcgtgtggcctttctcaccacaagtgtagcaaacaacctcagcagtagtatctttctttctaggcctcctcacatcattcacccttt 21631456  T
Q  163 gcctacccttgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    |  ||||||| |||||||| |||||||| ||||| ||||||||||||||    
T  21631455 gtttacccttatcagcaggagcactgtaaggctttggacgactttgctg 21631407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 22351257 - 22351300
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||    
T  22351257 tcagcaggggcactgtacggcttatgacgactctgctgcccctt 22351300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 26735875 - 26735736
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| ||||||||||| | |||  |  | ||||| |||||| ||||||||||| || |  | ||||||||||||||||||| ||| ||  | || |    
T  26735875 ttactcttatggcctttctcacaacaagtgtagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattaactctttgttttcctt 26735776  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||| ||| |||||||| ||||| |||||||| |||||    
T  26735775 tatcagtaggagcactgtaaggctttggacgactctgctg 26735736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 29473121 - 29473078
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| ||| |||||||||||||||||||||| |||||||||||    
T  29473121 tcagcggggacactgtacggcttaggacgactctgctgtccctt 29473078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 37288544 - 37288501
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| || ||||||||||||||||||||||| |||||||||||    
T  37288544 tcagcgggagcactgtacggcttaggacgactctgctgtccctt 37288501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 259
Target Start/End: Original strand, 21410366 - 21410560
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||| |||||||||| || |||||||| |||||    ||||| || |  |||| ||||| ||||||| |  | |||||||||| |||||| |  || |||    
T  21410366 acaagcgttactcttatgacctttctctccacatcggaaacacacaacttcagtaggagtatctctctttctgggcctcctcttatcattcaccctatgc 21410465  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
     ||||||| ||||| || |||||||| || |||  ||||||||| ||   |||||| || |||||| |||| | |||||||||||||||| ||||    
T  21410466 ttacccttatcagctggagcactgtaaggtttaccacgactttgttggtgcttacccctccgctcattcataatcttataatgagctttggtgtc 21410560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 43122688 - 43122770
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcatt 154  Q
    ||||||||||||||  |||||||||||||  | ||||| ||||| ||| || |||||||| | || || ||||||||||||||    
T  43122688 ttactcttgtggcccctctcgccacacttgtagcaaacaatctctgcatgaacatctctcctcttaggtctcctctcatcatt 43122770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 260
Target Start/End: Original strand, 23461306 - 23461398
Alignment:
Q  168 cccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt-cgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||||| |||||||||||||| || |||||||| ||||| ||||| ||||||  |||| |||||| |||  ||||| |||||||||||| |||||    
T  23461306 cccttatcagcaggggcactatagggcttagggcgactctgctggccctta-gtcttccgctcattcacaaccttgtaatgagctttggtgtcc 23461398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22465100 - 22465184
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcc 85  Q
    ||||||| ||||| ||||  |||||||||||||| || ||||| || ||||||||||| | | | ||| | ||||||||||||||    
T  22465100 gcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttggatgcaagcattactcttgtggcc 22465184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 40323 - 40575
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||    
T  40323 gcttgcaatccgctaacatgtgacccttctaaccacacctgaagcacttcttatcatctttggtacaaacattactcttgtggcctttctcgccacactt 40422  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    | |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||||||| ||||||    
T  40423 ataacagactatctcagcaggagcatctctcctattcggcctcctctcatcattcagtctttgctttcccttgtcagcaggggcactgtacggtttagga 40522  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| || |||||| |||||||||||||||||||||||||||||||||||||    
T  40523 cgactctgttgtcccatacctcttcgctcactcatcaccttataatgagcttt 40575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 182; Significance: 2e-98; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 20 - 253
Target Start/End: Complemental strand, 17504 - 17271
Alignment:
Q  20 gtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagca 119  Q
    ||||||||| ||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  17504 gtgacccttttgatcacacctaaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttataacaaactatctcagca 17405  T
Q  120 ggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttac 219  Q
    |||||||||||| |||||||||||||||||||||| ||||| ||  | |||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  17404 ggagcatctctcctattcggcctcctctcatcattcagtctttgttttcccttgtcagcaggggcactgtacggtttaggacgactctgctgtcccttac 17305  T
Q  220 ctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||||||||||||||||||||||||||||||||    
T  17304 ctcttcgctcactcatcaccttataatgagcttt 17271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 4888 - 4640
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||    
T  4888 gcttgcaatcagctaacatgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattactcttgtggcctttctggccacactt 4789  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    | |||| |||||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||| | |||||||||  ||||||||||||||| ||||||    
T  4788 ataacagactatctcagcaggagcatctctcctatttggcctcctctcatcattcagtctttgctttcccttgtcaaaaggggcactgtacggtttagga 4689  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgag 249  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4688 cgactctgctgtcccttacctcttcgctcactcatcaccttataatgag 4640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 176; Significance: 7e-95; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 12577220 - 12577479
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||| |||| || |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12577220 gcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacactt 12577319  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    ||| || |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||||    
T  12577320 aaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgcttacccttgtcagccggggcactatacggtttagga 12577419  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||| | || ||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  12577420 cgattctgatgtcccttacctcttcgctcactcatcactttataatgagctttggtgtcc 12577479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 19716593 - 19716341
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| || ||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||||    
T  19716593 gcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacactt 19716494  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| ||||||||||||||||||||| |||| ||||||||||||||||| | ||||||| | ||||||||| || |||||||||| || ||||||    
T  19716493 gtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcaacaagggcactgtatggtttagga 19716394  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19716393 cgactctgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 19716341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 19721156 - 19720904
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| || ||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||||    
T  19721156 gcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacactt 19721057  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| ||||||||||||||||||||| |||| ||||||||||||||||| | ||||||| | ||||||||| || |||||||||| || ||||||    
T  19721056 gtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcaacaagggcactgtatggtttagga 19720957  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19720956 cgactctgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 19720904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 23097568 - 23097342
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23097568 ttctgaccacacttgaagcacttcttctgatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagcaggagcat 23097469  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| ||||  ||| | ||||||||||||||||||||||||||||||||  |||| || ||| | |||||||| ||    
T  23097468 ctctcctcttgggcctcctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttagggagactctgatgtgctttacctctccg 23097369  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
    ||||||||||||||| |||||||||||    
T  23097368 ctcactcatcaccttgtaatgagcttt 23097342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 23274460 - 23274709
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||| |||||||||||   ||| |||||||| |||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| ||||||||    
T  23274460 gcttacaatcagctaatgtgtgtcccttctgtccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcaccacactt 23274559  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
        ||||| || |||| ||||||||||||| | || ||||||||||||||||| |  |||||| |||||||||||||||| ||||| ||| |||| |||    
T  23274560 gttgcaaacaatttcagtaggagcatctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatactgcttcgga 23274659  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    ||||| || |||||||| || || || |||||||||||||| ||||||||    
T  23274660 cgactctgttgtcccttgcccctacgttcactcatcaccttgtaatgagc 23274709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 20848456 - 20848711
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  20848456 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 20848555  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | | ||| |||||| |||||||||||||| | ||  |  |||| ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||    
T  20848556 gtagc-aacaatctcaacaggagcatctctcctctt--ggatcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttagga 20848652  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | || ||||||||||| || | ||||||||| | |||||||||||||||| ||||    
T  20848653 cgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtc 20848711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 66 - 217
Target Start/End: Original strand, 28350807 - 28350958
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcc 165  Q
    ||||| |||||||||||||||||||| ||||||||  | ||||| |||||||||||| |||||||| | || || |||||||||||||| | ||| |||     
T  28350807 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgct 28350906  T
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
      || |||||| |||| ||||| || ||||| ||||||| |||||| |||||    
T  28350907 cccctttgtcaacaggagcactatagggcttcggacgaccttgctgaccctt 28350958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 249
Target Start/End: Original strand, 21901469 - 21901652
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcc 165  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| ||||||| |||| |||||||  | || || |||||||||||||| | ||||||      
T  21901469 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctctgtt 21901568  T
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccct--tacctcttcgctcactcatcaccttataatgag 249  Q
    | || ||||||||||| |||||||| ||||| ||| ||| ||| || || |  | ||||||  ||||||||| |||||||||||||    
T  21901569 tccctttgtcagcaggagcactgtagggcttcggatgaccttgatggcctttgttcctctt--ctcactcataaccttataatgag 21901652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 210
Target Start/End: Complemental strand, 23116571 - 23116426
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| |||||||||||||||||| ||||||| || |||||||| ||||| | |||||||||  || | || |||| ||| |||||    | |||||||    
T  23116571 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatctctgaaggagcatccttcttcttaggccgcctatcatcgaccattctctgc 23116472  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgct 210  Q
     | ||||| |||||||||||||| || |||||||| ||||| ||||    
T  23116471 ttgcccttatcagcaggggcactataaggcttagggcgactctgct 23116426  T

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Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 44382982 - 44382933
Alignment:
Q  168 cccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  44382982 cccttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 44382933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 24657232 - 24657108
Alignment:
Q  3 ttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaa 102  Q
    ||||||||||||||   |||||||||||  ||||||| ||| ||||||||| | ||||  | ||||||  ||||||||||||||||||| ||||| || |    
T  24657232 ttgcaatcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattga 24657133  T
Q  103 aacaaactatctcagcaggagcatc 127  Q
    |||||   |||||||||||| ||||    
T  24657132 aacaagtaatctcagcaggaacatc 24657108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 17002037 - 17002080
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  17002037 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 17002080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 22322756 - 22322705
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  22322756 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 22322705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 24265407 - 24265450
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  24265407 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 24265450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 24713063 - 24713114
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  24713063 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 24713114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 9338616 - 9338662
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  9338616 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 9338662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 9487250 - 9487296
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  9487250 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 9487296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 10871887 - 10871933
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    |||||||||||||||||||||||||||||||| || |||||||||||    
T  10871887 tcagcaggggcactgtacggcttaggacgactctgttgtcccttacc 10871933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 16984274 - 16984320
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  16984274 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16984320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 22462993 - 22462931
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||| |||||||||||||||||||| ||||| || |||||||| ||||| |||||||||||    
T  22462993 acaaacattactcttgtggcctttctcaccacagttgaaacaaacaatctccgcaggagcatc 22462931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 23205245 - 23205306
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||| |||||||||||||||||||||||||| || |||||||| ||||| | ||||||||    
T  23205245 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23205306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 23676849 - 23676910
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||| |||||||||||||||||||||||||| || |||||||| ||||| | ||||||||    
T  23676849 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23676910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 11351287 - 11351161
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||||||    ||||||||||  ||||||| ||| || ||||   | ||||| | |||||| || ||||||||||||||||| ||||| ||    
T  11351287 gcttgcaatcagctaatgtatgacccttcttgccacaccagaaacatttctctacctcctttggacaaacattgctcttgtggcctttctcaccacaatt 11351188  T
Q  101 aaaacaaactatctcagcaggagcatc 127  Q
     ||||| || ||||| |||||||||||    
T  11351187 gaaacagacaatctccgcaggagcatc 11351161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 121
Target Start/End: Complemental strand, 21320505 - 21320459
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcagg 121  Q
    ||||||||||||||||||||||| |||||||| || |||||||||||    
T  21320505 ctcttgtggcctttctcgccacaattaaaacagacaatctcagcagg 21320459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 27374303 - 27374349
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||||    
T  27374303 ttgtcagcgggggcactgtacggcttaggacgactctgcagtccctt 27374349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 16931598 - 16931635
Alignment:
Q  180 ggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||| |||||||||||    
T  16931598 ggggcactgtacggcttaggacgactctgctgtccctt 16931635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 199
Target Start/End: Complemental strand, 24817354 - 24817218
Alignment:
Q  63 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 162  Q
    |||||| | |||||||||||||| ||||| |||||  || | ||||| ||||||| || || |||| || |  | ||||||||||||||||| | ||| |    
T  24817354 gtacaagcattactcttgtggcccttctcaccacaagtatagcaaacaatctcagtagtagtatctttctttctaggcctcctctcatcattcaatcttt 24817255  T
Q  163 gcctacccttgtcagcaggggcactgtacggcttagg 199  Q
    |  ||||||| |||||||| ||||| || ||||||||    
T  24817254 gtttacccttatcagcaggagcactataaggcttagg 24817218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 24874156 - 24874113
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||    
T  24874156 tcagcaggggcactgtacggcttagaacgactctgccgtccctt 24874113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 24705058 - 24704932
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||||||   |||||||||||  ||||||  ||| || |||||  | ||||  | |||||| || ||||||||||||||||| ||||| ||    
T  24705058 gcttgcaatcagctaaagtgtgacccttcttgccacactggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcaccacaatt 24704959  T
Q  101 aaaacaaactatctcagcaggagcatc 127  Q
     ||||| |  |||||||||||| ||||    
T  24704958 gaaacagataatctcagcaggaacatc 24704932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 23028963 - 23028912
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    ||||||||||||||||| ||||| | |||||| || |||||||||||||||||    
T  23028963 ctcttgtggcctttctcaccacaat-aaaacagacaatctcagcaggagcatc 23028912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 24678428 - 24678480
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    ||||||||||||||||| ||||| ||||| || || |||||||||||| ||||    
T  24678428 ctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatc 24678480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 168; Significance: 4e-90; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 51603828 - 51603569
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||| |||| || |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51603828 gcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacactt 51603729  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    ||| || |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||||||| ||||  |||||||| ||||| ||||||    
T  51603728 aaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttagga 51603629  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||| | || ||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  51603628 cgattctgatgtcccttacctcttcgctcactcatcactttataatgagctttggtgtcc 51603569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 53750506 - 53750247
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||| |||| || |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  53750506 gcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacactt 53750407  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    ||| || |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||||||| ||||  |||||||| ||||| ||||||    
T  53750406 aaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttagga 53750307  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||| | || ||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  53750306 cgattctgatgtcccttacctcttcgctcactcatcactttataatgagctttggtgtcc 53750247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 14993403 - 14993151
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||||||   ||| || ||||||||||||||||||||||||||||  ||   |  |||||| ||||||||||||||||| || ||||||||    
T  14993403 gcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttcttctcacggtcacaaacattactcttgtggcctttttcaccacactt 14993304  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
     |||||||| || |||| ||||||||||||| | || ||||||||||||||||| | ||||||| |||||||||||||||||||||| ||||||||  ||    
T  14993303 gaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggcttcaga 14993204  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| || |||||||| ||||| ||||||||||||||||| |||||||||||    
T  14993203 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttt 14993151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 16150872 - 16151124
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| || |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||    
T  16150872 gcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacactt 16150971  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    | | ||||| || ||| |||||||||||||| | || ||||||||||||||||| |   ||||| | || ||||||| ||| ||||| |||||||| |||    
T  16150972 atagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcaacttctgctttcctttgtcagtaggagcactatacggcttcgga 16151071  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| |||||||| || || ||||| |||||||||||||| |||||||||||    
T  16151072 cgactctgctgtcctttgccccttcgatcactcatcaccttgtaatgagcttt 16151124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 16155018 - 16155270
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| || |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||    
T  16155018 gcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacactt 16155117  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    | | ||||| || ||| |||||||||||||| | || ||||||||||||||||| |   ||||| | || ||||||| ||| ||||| |||||||| |||    
T  16155118 atagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcaacttctgctttcctttgtcagtaggagcactatacggcttcgga 16155217  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| |||||||| || || ||||| |||||||||||||| |||||||||||    
T  16155218 cgactctgctgtcctttgccccttcgatcactcatcaccttgtaatgagcttt 16155270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 27 - 249
Target Start/End: Original strand, 18259703 - 18259925
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||||||||||||||||||  |   |||||| ||||||||||||||||| || ||||||||||| ||||| || | || ||||||||    
T  18259703 ttctgaccacacctgaagcacttcttctcatctctatcacaaacattactcttgtggcctttttcaccacacttaaagcaaacaatattagtaggagcat 18259802  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    || || | || ||||||||||||||||| |  |||||| |||||||||||||||| ||||| |||||||| ||| |||| ||||||||||| || || ||    
T  18259803 ctgtcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatacggcttcggatgactctgctgtcccttgcccctacg 18259902  T
Q  227 ctcactcatcaccttataatgag 249  Q
    ||||||||||||||| |||||||    
T  18259903 ctcactcatcaccttgtaatgag 18259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 15073595 - 15073847
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||||||   ||| || ||||  |||||||| || ||||||||||||||   |  ||| || ||||||||||||||||| || ||||||||    
T  15073595 gcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggcctttttcaccacactt 15073694  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
     ||||| || ||||||| ||||||||||||| |  | ||||||||||||||||| ||||||||  || | ||||||||||| ||||| ||||| || |||    
T  15073695 gaaacagacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgtttaactttgtcagcaggagcactatacggtttcgga 15073794  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    |||||  |||||||||||||||| |||||||||||||||||||||||||||||    
T  15073795 cgactcagctgtcccttacctctacgctcactcatcaccttataatgagcttt 15073847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 15267038 - 15267264
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||||||||||||||||||  ||  |||||| |||||||| ||||| |||||  ||||||| || ||||| || |  | ||||||||    
T  15267038 ttctgaccacacctgaagcacttcttctcatctctgtcacaaacattactcttatggcccttctcatcacacttgaagcaaacaatattcgtaggagcat 15267137  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| |  |||||| |||||||||||||||| ||||| |||||||| |||||||| || |||||||| ||||| ||    
T  15267138 ctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatacggcttcggacgactctgttgtcccttgcctctgcg 15267237  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     |||||||||||||| |||||||||||    
T  15267238 ttcactcatcaccttgtaatgagcttt 15267264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 3261830 - 3261572
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  3261830 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 3261731  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| |||||||||||||| | || |||||||| ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||    
T  3261730 gtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttagga 3261631  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | |||||||||||||| || | ||||||||| | ||| |||||||||||| ||||    
T  3261630 cgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtc 3261572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 20893267 - 20893525
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||| ||||||||||||||||||||||||||| |||||||  |   |||||| || ||||||| |||||| || ||||||||    
T  20893267 gcttgcattcagctaaattgtgtcccttctgaccacacctgaagcacttcctctcatctctaccacaaacattgctcttgttgcctttttcaccacactt 20893366  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| ||||||| ||||||||||||| | || |||||||| |||||||| |   ||||| | || ||||||||||| ||||| || |||||||||    
T  20893367 gtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcagcaggagcactttaaggcttagga 20893466  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||||| ||||||||||| || || | ||||||||| | ||| |||||||||||| ||||    
T  20893467 cgactctgctgtcccttgcccctcctctcactcattatcttgtaatgagctttggtgtc 20893525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 7357503 - 7357761
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| ||||||| ||   | |||| || ||||||||||||||||| |||| |||    
T  7357503 gcttgcattcagctaaattgtgacccttctgaccacacctgaagcacttcctctcatctttaccataaacattgctcttgtggcctttctcaccactctt 7357602  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| ||||||||||||||||||||| | || |||||||| ||||||   |   ||||| | || ||||||||||| ||| |||| |||||||||    
T  7357603 gtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcaatgtaaggcttagga 7357702  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | || ||||||||||| || | ||||||||| | ||| |||||||| ||| ||||    
T  7357703 cgattctgttgtcccttacccctcctctcactcattatcttgtaatgagccttggtgtc 7357761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 259
Target Start/End: Complemental strand, 11204249 - 11204010
Alignment:
Q  20 gtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagca 119  Q
    ||||||||||||||||||||||||||| ||  | |||||  |   |||||| || ||||||||||||||||| ||||||||| ||||||| ||||||| |    
T  11204249 gtgacccttctgaccacacctgaagcattttctatcatctctaccacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcagaa 11204150  T
Q  120 ggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttac 219  Q
    |||||||||||| | || || ||||| |||||||| |   ||| | | || ||||||||||| ||||| || |||||||||||| | |||||||||||||    
T  11204149 ggagcatctctcctcttgggtctcctatcatcattcatcttctactttcctttgtcagcaggagcactataaggcttaggacgattctgctgtcccttac 11204050  T
Q  220 ctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    | || | ||||||||| | ||| |||||||||||| ||||    
T  11204049 ccctcctctcactcattatcttgtaatgagctttggtgtc 11204010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 29450573 - 29450315
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   |||||||||||||||||||||||| |||||| | |||||      |||||| |||||||||||||||||||| ||||||||    
T  29450573 gcttgcattcagctaaactgtgacccttctgaccacacctgaaacacttcctatcatctcctccacaaacattactcttgtggcctttctcaccacactt 29450474  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| |||||||||||||| | || |||||||| ||||||   |   ||||| | || ||||||||||| |||||||| || ||||||    
T  29450473 gtagcaaacaatctcaacaggagcatctctcctcttaggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggtttagga 29450374  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | || ||||||||||| || | ||||||||| | |||||||||||||||| ||||    
T  29450373 cgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtc 29450315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 44658902 - 44658644
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  44658902 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 44658803  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| |||||||||||||| | || |||||||| |||| |   |   ||||| | || ||||| ||||| |||||||| |||||||||    
T  44658802 gtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatgacccatcttctgctttcctttgtccgcaggagcactgtaaggcttagga 44658703  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | || ||||||||||| || | ||||||||| | ||| |||||||||||| ||||    
T  44658702 cgattctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtc 44658644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 254
Target Start/End: Original strand, 14697408 - 14697590
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| ||||||||||| |||||  || | ||||| |||||||||| ||||||| || |  | ||||||||||||||||| | ||| ||| ||||||    
T  14697408 ttactcttatggcctttctcaccacaagtatagcaaacaatctcagcagtagcatctttctttctaggcctcctctcatcattcaatctttgcttaccct 14697507  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
    | |||||||| |||||||| ||||| |||||||||||||| ||||| ||| | | |||| |||  || || ||||||||||||    
T  14697508 tatcagcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaactttgtaatgagctttg 14697590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 27903621 - 27903751
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||| ||||  ||||| ||||||||||| ||||| |||||||||||||| ||||| || || |||||||||||||||||| | ||||||||    
T  27903621 gcttgcattcagccaacacatgacctttctgaccacatctgaaacacttcttctcatctttggtgcagacattactcttgtggcctttcgcaccacactt 27903720  T
Q  101 aaaacaaactatctcagcaggagcatctctc 131  Q
      ||||||| |  ||| ||||||||||||||    
T  27903721 gtaacaaacaacatcaacaggagcatctctc 27903751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 66 - 256
Target Start/End: Original strand, 8708978 - 8709168
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcc 165  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| ||||| |  | || || |||||||||||||| | ||| |||     
T  8708978 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctattctcttaggtctcctctcatcattcaatctttgct 8709077  T
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgat 256  Q
    | || ||||||||||| ||||| ||  |||| ||||||| |||||| || ||    || ||||||||||| ||||| ||||||||||||||    
T  8709078 tccctttgtcagcaggagcactatagagcttcggacgaccttgctgacctttgttcctccgctcactcataaccttgtaatgagctttgat 8709168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 250
Target Start/End: Original strand, 13879416 - 13879594
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccc- 170  Q
    |||||||||||||| ||||| ||||||||  ||||||| ||||||| || | |||||||  | || || |||||||||||||| | ||| || ||||||     
T  13879416 ttactcttgtggcccttctcaccacacttgtaacaaacaatctcagtagaaacatctcttctcttaggtctcctctcatcattcaatctttg-ctaccct 13879514  T
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    |||||| |||| |||||||| ||||| ||||||| |||||| |||||    || ||||||||| | ||||||||||||||    
T  13879515 ttgtcatcaggagcactgtagggcttcggacgaccttgctgacccttgttcctccgctcactcctaaccttataatgagc 13879594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 218
Target Start/End: Complemental strand, 18604531 - 18604378
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| |||||||||||||||||||||||||| ||||||||||  ||||| | |||||||||  || | || |||| ||| |||||    | |||||||    
T  18604531 acaaacattactcttgtggcctttctcgccacagttaaaacaaataatctccgaaggagcatccttcttcttaggccgcctatcatcgaccattctctgc 18604432  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 218  Q
     | ||||| |||||||||||| | || |||||||| ||||| ||||| ||||||    
T  18604431 ttgcccttatcagcaggggcattataaggcttagggcgactctgctggccctta 18604378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 217
Target Start/End: Original strand, 13513650 - 13513802
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| || ||||||||||||||||||||||| || ||||| || ||||| |||||||||||  || | || |||| ||| ||||||   | |||||||    
T  13513650 acaaacattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagcatccttcttcttaggccgcctatcatcaaccattctctgc 13513749  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
     | ||||| ||| |||||||||| || |||||||| ||||| ||||| |||||    
T  13513750 ttgcccttatcaacaggggcactataaggcttagggcgactctgctggccctt 13513802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 8389810 - 8389861
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  8389810 tacccttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 8389861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 8343 - 8482
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||||||||| |||||  || | || || |||||| ||||||||||| || |  | || | ||||||||||   | ||||||  ||||||    
T  8343 ttactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttatagggcgcctctcatcaaccattctctgtttaccct 8442  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||||||| |||||||| |||||||||||||| |||||    
T  8443 tatcagcaggagcactgtaaggcttaggacgactctgctg 8482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 8050229 - 8050186
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  8050229 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 8050186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 14300585 - 14300542
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  14300585 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 14300542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 19775407 - 19775356
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  19775407 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 19775356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 23959145 - 23959196
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  23959145 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 23959196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 27714734 - 27714785
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  27714734 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 27714785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 12480003 - 12480049
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  12480003 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 12480049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 16233601 - 16233555
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  16233601 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16233555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 17091758 - 17091712
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  17091758 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 17091712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 18224185 - 18224123
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||| |||| ||||||||||||||||||||| || |||||||| ||||| |||||||||||    
T  18224185 acaaacattacacttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 18224123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 16219495 - 16219628
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| |||||||||||||||||  || | || |  |||||| ||||||||||| || |  | ||||||||||| ||||||| ||| ||  | ||||    
T  16219495 ttactcttatggcctttctcgccacaagtatagcacataatctcaacaggagcatctttctttctaggcctcctctcgtcattaactctttgttttccct 16219594  T
Q  172 tgtcagcaggggcactgtacggcttaggacgact 205  Q
    | |||||||| |||||||| ||||| ||||||||    
T  16219595 tatcagcaggagcactgtaaggctttggacgact 16219628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 16222815 - 16222948
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| |||||||||||||||||  || | || |  |||||| ||||||||||| || |  | ||||||||||| ||||||| ||| ||  | ||||    
T  16222815 ttactcttatggcctttctcgccacaagtatagcacataatctcaacaggagcatctttctttctaggcctcctctcgtcattaactctttgttttccct 16222914  T
Q  172 tgtcagcaggggcactgtacggcttaggacgact 205  Q
    | |||||||| |||||||| ||||| ||||||||    
T  16222915 tatcagcaggagcactgtaaggctttggacgact 16222948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 15741 - 15602
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||||||||| |||||  || | || || |||||| ||||||||||| || |  | || | ||||||||||   | ||||||  ||||||    
T  15741 ttactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttctagggcgcctctcatcaaccattctctgtttaccct 15642  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||||||| |||||||| | |||||||||||| |||||    
T  15641 tatcagcaggagcactgtaagtcttaggacgactctgctg 15602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 14683973 - 14684016
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||||||||||||||| |||||||||||||| |||||||||||    
T  14683973 tcagcaggggcactgtatggcttaggacgactctgctgtccctt 14684016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 40476446 - 40476489
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||||||||||||||||||||||||||||||  ||||||||||    
T  40476446 tcagcaggggcactgtacggcttaggacgactccgctgtccctt 40476489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 14162871 - 14162923
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 218  Q
    ||||||| |||||||| |||||||| |||||||||||||| || |||||||||    
T  14162871 tacccttatcagcaggagcactgtaaggcttaggacgactctgttgtccctta 14162923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 19635542 - 19635585
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||    
T  19635542 tcagcgggggcactgtacggcttaggacaactctgctgtccctt 19635585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 167; Significance: 2e-89; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 64615 - 64389
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  64615 ttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaactatctcagcaggagcat 64516  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    | ||| ||||||||||||| |||||||| ||||||||| | ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  64515 ccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctcttcg 64416  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
    |||||||||||||||||||||||||||    
T  64415 ctcactcatcaccttataatgagcttt 64389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 49193 - 48967
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  49193 ttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcccttctcgccacacttgtaacaaactatctcagcaggagcat 49094  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    | ||| ||||||||||||| |||||||| ||||||||| | ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  49093 ccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctcttcg 48994  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
    |||||||||||||||||||||||||||    
T  48993 ctcactcatcaccttataatgagcttt 48967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 58227 - 58001
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  58227 ttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcccttctcgccacacttgtaacaaactatctcagcaggagcat 58128  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    | ||| ||||||||||||| |||||||| ||||||||| | ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  58127 ccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctcttcg 58028  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
    |||||||||||||||||||||||||||    
T  58027 ctcactcatcaccttataatgagcttt 58001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 29912 - 30141
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    ||||| |||||||||||||||||||||||||||||  |   ||||||||||||||||||||||||||| |||||||| || |||||||| |||| ||||     
T  29912 cccttttgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggaa 30011  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    |||||||| | || ||||||||||||||||| |  |||||| |||||||||||||||| ||||| |||||||| |||||||| ||||||||||| |||||    
T  30012 catctctcctcttgggcctcctctcatcatttaaactctgcttacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctct 30111  T
Q  224 tcgctcactcatcaccttataatgagcttt 253  Q
     ||||||||||||||||| |||||||||||    
T  30112 acgctcactcatcaccttgtaatgagcttt 30141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 150; Significance: 2e-79; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 11945 - 11696
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| || |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||    
T  11945 gcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacactt 11846  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| ||||||| ||||||||||||| | || ||||||||||||||||||||||||||| | || ||||||||||| ||||| || || ||||||    
T  11845 gtaacaaacgatctcagtaggagcatctctcctcttgggcctcctctcatcattaagtctctgctttcctttgtcagcaggagcactatatggtttagga 11746  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  11745 cgactctgctgtcccttacctcttctctcactcatcaccttataatgagc 11696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 1991 - 1739
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||| |||||||||||   ||| || |||||||||||||||||||||||||||||||| ||   |||||| |||||||||||||||||||| ||||||||    
T  1991 gcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcaccacactt 1892  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| || ||||||||||||||| || | || ||||||||||||||||| || |||||  | || ||||||||||| ||||| || || ||||||    
T  1891 gtagcaaacaatttcagcaggagcatctatcctcttgggcctcctctcatcattcagcctctgttttcctttgtcagcaggagcactatatggtttagga 1792  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
     |||| ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  1791 tgactctgctgtcccttacctctgcgctcactcatcaccttgtaatgagcttt 1739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 70637 - 70767
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||| ||||  ||||| || ||||| || ||||| |||||||||||||| ||||| || || |||| ||||||||||||| | ||||||||    
T  70637 gcttgcattcagccaacacatgacctttatgaccgcatctgaaacacttcttctcatctttggtgcagacattacccttgtggcctttcgcaccacactt 70736  T
Q  101 aaaacaaactatctcagcaggagcatctctc 131  Q
      ||||||| |  ||| ||||||||||||||    
T  70737 gtaacaaacaacatcaacaggagcatctctc 70767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 24 - 260
Target Start/End: Complemental strand, 1246 - 1010
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||| ||    
T  1246 cccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcatactatctcagcagaag 1147  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    || |  || || ||||||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||| ||||||||| | || ||||||||||||||    
T  1146 cacccttcttactcggcctcctctcatcattaagtctctgcttacccttatcagccggggcactatacggtttaggacgattctgatgtcccttacctct 1047  T
Q  224 tcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    |||||||||| |||||||||||||||||||| |||||    
T  1046 tcgctcactcttcaccttataatgagctttggtgtcc 1010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 148; Significance: 4e-78; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 526 - 267
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| || ||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||  |||||| ||    
T  526 gcttgcaatcagctaggctgtgtcctttctgaccacacctgaaacacttcttctcatccttggtacaaacatcactcttgtggcctttcctgccacattt 427  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| ||||||||||||||||||||| |||| ||||||||||||||||| | | ||||| | ||||||||||||||||||||||||||||||||     
T  426 gtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaatatctgctttcccttgtcagcaggggcactgtacggcttaggg 327  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
     |||| || ||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  326 tgactctgttgtcccttacctcttcgttcactcatcaccttataatgagctttggtgtcc 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 21102 - 21331
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    |||||||| |||||||||||||||||||||||| | || |||||||| |||||||||||||||||||| ||||||||  | ||||| |||||||||| ||    
T  21102 cccttctgtccacacctgaagcacttcttctcacctttagtacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcagaag 21201  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    |||||||| | || ||||||||||||||||| || |||||  | || ||||||||||||||||| ||||| ||||||||||| | ||||||||| ||| |    
T  21202 catctctcctcttgggcctcctctcatcattcagcctctgttttcctttgtcagcaggggcactatacggtttaggacgactctactgtcccttgccttt 21301  T
Q  224 tcgctcactcatcaccttataatgagcttt 253  Q
     ||||||||||||||||| |||||||||||    
T  21302 acgctcactcatcaccttgtaatgagcttt 21331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 3e-75; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 21567146 - 21566920
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||||||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||    
T  21567146 ttctgaccacacctgaagcacttcttctcatctttagtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagcat 21567047  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||| ||||||||||| ||||  ||| | |||||||||||||||||||||||||||||||||||||| || ||||||||||  || ||    
T  21567046 ctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggacgactctgttgtcccttactcctccg 21566947  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
    ||||||||||||||| |||||||||||    
T  21566946 ctcactcatcaccttgtaatgagcttt 21566920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 24515569 - 24515343
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||| ||||||||| ||||||| || ||| |||||||||    
T  24515569 ttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcaccacacttataacaaacaatatcaacaggagcat 24515470  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| || |||||  | |||||||||||||| ||||| || || ||||||||||| || |||||||| ||||| ||    
T  24515469 ctctcctcttgggcctcctctcatcattcagcctctgttttcccttgtcagcaggagcactatatggtttaggacgactctgttgtcccttgcctctgcg 24515370  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     |||||||||||||| |||||||||||    
T  24515369 gtcactcatcaccttgtaatgagcttt 24515343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 18797790 - 18798041
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| |||||||||||||||||||| || |||| |||||| || || ||||| |||||||||||||||||||||||||||||    
T  18797790 gcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacatttctgctcatctttagtgcaaacattactcttgtggcctttctcgccacactt 18797889  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    | ||||||| || ||  |||||||||| ||| | || ||||||||||||||||| | ||| ||| | |||||||||||||| ||||| |||||||| |||    
T  18797890 ataacaaacaatatccacaggagcatccctcctcttgggcctcctctcatcattcaatctttgctttcccttgtcagcaggagcactatacggcttcgga 18797989  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctt 252  Q
    ||||| ||||||||||| ||||| || |||||||||||||| ||||||||||    
T  18797990 cgactctgctgtcccttgcctctgcggtcactcatcaccttgtaatgagctt 18798041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 14377071 - 14376845
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| || |||||  | ||||| |  ||| |||||||||    
T  14377071 ttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcaccgcacttgtagcaaacaacatcaacaggagcat 14376972  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| |||| || |||||||||||||| |  |||||  | |||||||||||||| ||||| |||||||| |||||||| ||||||||||| |  |||||    
T  14376971 ctctcctattgggtctcctctcatcattcaacctctgttttcccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgctccttcg 14376872  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     |||||||||||||| |||||||||||    
T  14376871 atcactcatcaccttgtaatgagcttt 14376845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 250
Target Start/End: Complemental strand, 34642762 - 34642517
Alignment:
Q  6 caatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaac 105  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||| |    
T  34642762 caatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcccttctcgccacacttaaagc 34642663  T
Q  106 aaactatctcagcaggagcatctc-tcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgac 204  Q
    |||||||||| |||||||  |||| ||   |  || ||||| |||||||| ||||  ||| | |||||  ||||||| ||||| ||||||||||||||||    
T  34642662 aaactatctccgcaggagtgtctcttcccttggggtctcctttcatcattcagtcgttgctttcccttaccagcaggagcactatacggcttaggacgac 34642563  T
Q  205 tttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    | || |||||||| || || || |||||||||||||| ||||||||    
T  34642562 tctgttgtcccttgcccctccgttcactcatcaccttgtaatgagc 34642517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 19438102 - 19438324
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| || ||||||||||||||||| ||||| |||||||| || |||||||| ||||||  |||||||||||| ||||||||    
T  19438102 gcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttattctcatctttagtacaaacattactcaagtggcctttctcaccacactt 19438201  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||| ||| ||||||||||||||||||||| | || ||||||||||||||||| |  |||||| |||||||||||||||| ||||| || ||||| |||    
T  19438202 gtaacgaacgatctcagcaggagcatctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatatggcttcgga 19438301  T
Q  201 cgactttgctgtcccttacctct 223  Q
    ||||| |||||||||||||||||    
T  19438302 cgactctgctgtcccttacctct 19438324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 24367500 - 24367758
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  24367500 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 24367599  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| || ||||||||||| | || |||||||| ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||    
T  24367600 gtagcaaacaatctcaacatgagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttagga 24367699  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | |||||||||||||| || | ||||||||| | ||| |||||||||||| ||||    
T  24367700 cgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtc 24367758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 24 - 253
Target Start/End: Complemental strand, 10466006 - 10465777
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    ||||||||||||||||| || || ||| |||||||  |   |||| | || |||||||||||||| || ||||||||  |||| || ||||||||||||     
T  10466006 cccttctgaccacacctaaaacatttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaa 10465907  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    |||||||| | || |||||||| |||||||| | | ||||| | |||||||||||| | ||| |||| |||||||||||||| |||||||||||||| ||    
T  10465906 catctctcctcttgggcctcctatcatcattcattttctgctttcccttgtcagcaagagcattgtaaggcttaggacgactctgctgtcccttacccct 10465807  T
Q  224 tcgctcactcatcaccttataatgagcttt 253  Q
     | ||||||||||||||| |||||||||||    
T  10465806 cctctcactcatcaccttgtaatgagcttt 10465777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 76 - 253
Target Start/End: Original strand, 25771019 - 25771196
Alignment:
Q  76 tcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtc 175  Q
    ||||||||||||| || |||||||| ||||| || ||||||| ||||||||||||| | || ||||||||||||||||| || |||||  |||| |||||    
T  25771019 tcttgtggcctttttcaccacacttgaaacagacaatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtc 25771118  T
Q  176 agcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    |||||| ||||| ||||| |  |||||||| || |||||||||||||| ||||||||||||||  |||||||||||||    
T  25771119 agcaggagcactatacggttacggacgactctgttgtcccttacctctgcgctcactcatcactctataatgagcttt 25771196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 19456149 - 19456372
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||  |||||||||||||||||||||||  |   ||| || ||||||||||||||||| || |||||||| || ||||| ||||||| ||||| ||    
T  19456149 ttctgacaccacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtat 19456248  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| || || ||  | || ||||||||||| ||||| || || ||||||||||| || |||||||||||||| ||    
T  19456249 ctctcctcttgggcctcctctcatcattcagcctttgttttcctttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcg 19456348  T
Q  227 ctcactcatcaccttataatgagc 250  Q
     ||||||| || ||| ||||||||    
T  19456349 ttcactcaccagcttgtaatgagc 19456372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 19466294 - 19466517
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||  |||||||||||||||||||||||  |   ||| || ||||||||||||||||| || |||||||| || ||||| ||||||| ||||| ||    
T  19466294 ttctgacaccacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtat 19466393  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| || || ||  | || ||||||||||| ||||| || || ||||||||||| || |||||||||||||| ||    
T  19466394 ctctcctcttgggcctcctctcatcattcagcctttgttttcctttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcg 19466493  T
Q  227 ctcactcatcaccttataatgagc 250  Q
     ||||||| || ||| ||||||||    
T  19466494 ttcactcaccagcttgtaatgagc 19466517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 21474771 - 21474904
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    ||||||||||||||||| || |||||||| |||||||| ||||||| ||||||||||||| |  | ||||||||||||||||| ||  ||||| ||||||    
T  21474771 ttactcttgtggcctttttcaccacacttgaaacaaacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcatctgcttaccct 21474870  T
Q  172 tgtcagcaggggcactgtacggcttaggacgact 205  Q
    |||||||||| ||||| |||||||| ||||||||    
T  21474871 tgtcagcaggagcactatacggcttcggacgact 21474904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 250
Target Start/End: Original strand, 19881588 - 19881745
Alignment:
Q  93 ccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacg 192  Q
    ||||||||||| |||||||||||||||||||  |||||    || || || ||||||||||| ||||  ||| | |||||  |||||||||| |||||||    
T  19881588 ccacacttaaagcaaactatctcagcaggagtgtctcttcccttgggtcttctctcatcattcagtcgttgctttcccttaccagcaggggcgctgtacg 19881687  T
Q  193 gcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    |||||||||||||||| ||| |||| || || || |||||||||||||| ||||||||    
T  19881688 gcttaggacgactttgttgttccttgcccctccgttcactcatcaccttgtaatgagc 19881745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 19486435 - 19486222
Alignment:
Q  41 gaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggc 140  Q
    ||||||||||||||||||     | ||||| |||||||||||||| ||||| ||||||||  | ||||| ||||||| |||| |||||||  | || ||     
T  19486435 gaagcacttcttctcatcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggt 19486336  T
Q  141 ctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcacct 240  Q
    |||||||||||||| | ||| ||| | || ||||||||||| |||||||| ||||| | ||||| |||||| || ||    || ||||||||||| ||||    
T  19486335 ctcctctcatcattcaatctttgcttccctttgtcagcaggagcactgtagggcttcgaacgaccttgctggcctttgttcctccgctcactcataacct 19486236  T
Q  241 tataatgagctttg 254  Q
    | ||||||||||||    
T  19486235 tgtaatgagctttg 19486222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 23081594 - 23081733
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||||||||| |||||  || ||||||| |||||| ||||||||||| || |  | |||| |||||||||||||| ||| ||| | || |    
T  23081594 ttactcttgtggcctttctcaccacaagtataacaaacaatctcaacaggagcatctttcttcctaggccgcctctcatcattaactctttgctttcctt 23081693  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||||||  |||||||| ||||| |||||||| |||||    
T  23081694 tatcagcagcagcactgtaaggctttggacgactctgctg 23081733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 16813805 - 16813902
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctg 163  Q
    ||||| |||||||||||||||||||| ||||||||  | ||||| |||||||||||| |||||||| | || || |||||||||||||| | ||||||    
T  16813805 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcattcaatctctg 16813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 154
Target Start/End: Complemental strand, 8720821 - 8720733
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcatt 154  Q
    ||||| |||||||||||||||||||| ||||||||  | ||||| |||||| ||||| |||||||| | || |||||||||||||||||    
T  8720821 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcatcaggatcatctctcctcttaggcctcctctcatcatt 8720733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 253
Target Start/End: Original strand, 18660161 - 18660271
Alignment:
Q  143 cctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcacctta 242  Q
    ||||||||||||||  ||||||  |||||| |||||||| |||||||| ||||| |||||||||||||| | ||||||| | | ||||||||   ||||     
T  18660161 cctctcatcattaaccctctgctcacccttatcagcaggagcactgtaaggctttggacgactttgctgactcttacctttcctctcactcacagccttg 18660260  T
Q  243 taatgagcttt 253  Q
    |||||||||||    
T  18660261 taatgagcttt 18660271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 28312892 - 28312946
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  28312892 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttacc 28312946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 254
Target Start/End: Complemental strand, 30678141 - 30677952
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| |||||||||||||  ||||| ||||||||  | ||||| | ||||||||||| |||| || |  | ||||||||||||||||| |  || |||    
T  30678141 acaaacattactcttgtggctcttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattcaccctttgc 30678042  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
     |||  || |||||||| ||  |||| ||||| |||||| | ||||| | |||||| || ||||||||||| ||||| |||| |||||||    
T  30678041 ttacatttatcagcaggagcgttgtaaggctttggacgattctgctgactcttacccctccgctcactcataaccttgtaattagctttg 30677952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 15462436 - 15462688
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||| ||||  ||||| |||||||| || ||||| || |||||||||||  |||| || || |||||||||||||||||| | ||||||||    
T  15462436 gcttgcactcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctctggtgcagacattactcttgtggcctttcgcaccacactt 15462535  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      |||| || |  ||| ||||||  ||||||    | |||  |||||||||||| | ||||||  | || |||| |||||| |||||||| ||||| ||     
T  15462536 gtaacacacaacatcaacaggagtctctctccctctaggctgcctctcatcattcaatctctgtttgcctttgttagcaggagcactgtagggcttcggg 15462635  T
Q  201 cgactttgctgtccctta--cctcttcgctcactcatcaccttataatgagcttt 253  Q
    |||||   ||| ||||||  ||||||  ||||||||||||||| |||||||||||    
T  15462636 cgactactctgacccttattcctctt--ctcactcatcaccttgtaatgagcttt 15462688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 25115822 - 25115865
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  25115822 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 25115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 16575157 - 16575203
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  16575157 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16575203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 16620223 - 16620177
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  16620223 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16620177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 27559150 - 27559029
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   |||||||||||  ||||||| ||| ||||||||| | ||||  | ||||||  ||||||||||||||||||| ||||| ||    
T  27559150 gcttgcagtcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaatt 27559051  T
Q  101 aaaacaaactatctcagcagga 122  Q
     ||||||   ||||||||||||    
T  27559050 gaaacaagtaatctcagcagga 27559029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 28260211 - 28260162
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  28260211 ttgtcagcgggggcactgtacggcttaggacgactctgctgccccttacc 28260162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 28285705 - 28285754
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  28285705 ttgtcagcgggggcactgtacggcttaggacgactctgctgccccttacc 28285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 28338960 - 28338911
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  28338960 ttgtcagcgggggcactgtacggcttaggacgactctgctgccccttacc 28338911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 22829397 - 22829354
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  22829397 tcagcaggggcactgtacggcttaggacgactctgttgtccctt 22829354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 24292793 - 24292750
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  24292793 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 24292750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 29589453 - 29589407
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||    
T  29589453 ttgtcagtgggggcactgtacggcttaggacgactctgctgtccctt 29589407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 27205901 - 27205938
Alignment:
Q  183 gcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  27205901 gcactgtacggcttaggacgactctgctgtcccttacc 27205938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 27243327 - 27243290
Alignment:
Q  183 gcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  27243327 gcactgtacggcttaggacgactctgctgtcccttacc 27243290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 20010683 - 20010599
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcc 85  Q
    ||||||| ||||| ||||  |||||||||||||| || ||||| || ||||||||||| | ||| ||| | ||||||||||||||    
T  20010683 gcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcc 20010599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 2871813 - 2871770
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||| ||||||||||||| || ||||||||    
T  2871813 tcagcaggggcactgtacagcttaggacgactctgttgtccctt 2871770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 5836239 - 5836196
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||| ||||||||||||||||| || ||||||||    
T  5836239 tcagcaggggcactatacggcttaggacgactctgttgtccctt 5836196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 216
Target Start/End: Original strand, 21764976 - 21765127
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| || ||||||||||||||||| ||||| || ||||| || ||||| |||||||||||  || | || |||| ||| |||||    | |||||      
T  21764976 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctaa 21765075  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccct 216  Q
     | ||||| |||||||||||||| || |||||||| ||||| ||||| ||||    
T  21765076 ttgcccttatcagcaggggcactatagggcttagggcgactctgctggccct 21765127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 25756720 - 25756670
Alignment:
Q  77 cttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    ||||||||||||||| ||||| |||||||| || ||||| |||||||||||    
T  25756720 cttgtggcctttctcaccacaattaaaacagacaatctccgcaggagcatc 25756670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 253
Target Start/End: Original strand, 21474908 - 21474936
Alignment:
Q  225 cgctcactcatcaccttataatgagcttt 253  Q
    |||||||||||||||||||||||||||||    
T  21474908 cgctcactcatcaccttataatgagcttt 21474936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 22437043 - 22437095
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    ||||||||||||||||| ||||| ||||| || || |||||||||||| ||||    
T  22437043 ctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatc 22437095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 25958863 - 25958724
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||| ||||||||||||  |||||| |  | ||||| ||||||| ||||||||||||  | || || |||||||||||||  ||||| || || ||||    
T  25958863 ttactcctgtggcctttcttaccacacctgtagcaaacaatctcagtaggagcatctctactcttaggtctcctctcatcatccagtctttg-ctcccct 25958765  T
Q  172 t-gtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||| || | ||||| || ||||| ||||||||||||||    
T  25958764 tcgtcaacaagagcactataaggctttggacgactttgctg 25958724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 558 - 332
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  558 ttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagtaggagcat 459  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || || || ||||||||||| || |  ||| | |||||||||||||||| ||||||||||||||||||||| || ||||||||||| || ||    
T  458 ctctcctcttgggtcttctctcatcattcagccgttgctttcccttgtcagcagggggactgtacggcttaggacgactctgttgtcccttacccctccg 359  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
    ||||||||||||||| |||||||||||    
T  358 ctcactcatcaccttgtaatgagcttt 332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 53462 - 53204
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||| |||  | ||| || || |||||||||||||| || |||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  53462 gcttgcaatcaactaggatgtgtcctttttgaccacacctgaatcatttcttctcatccttagtacaaacattactcttgtggcctttctcgccacactt 53363  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| ||| ||||| ||||||||||| |||| ||||||||||||||||| | ||||||| | ||||||||||||||||||||||| || ||||||    
T  53362 gtaacaaacgatcccagcaagagcatctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcagcaggggcactgtatggtttagga 53263  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    |||  ||| ||||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  53262 cgaacttgatgtcccttatctcttcgctcactcatcaccttataatgagccttggtgtc 53204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 7303 - 7555
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| || |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||    
T  7303 gcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacactt 7402  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| ||||||||||||||||||||| |||| ||||||||||||||||| |  |||||| ||||||||||| |||| ||||| |||||||| |||    
T  7403 gtaacaaacaatctcagcaggagcatctctcctattgggcctcctctcatcattcaacctctgcttacccttgtcaacaggagcactatacggcttcgga 7502  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| |||||||| || |  ||||| |||||||||||||| |||||||||||    
T  7503 cgactctgctgtcctttgctccttcgatcactcatcaccttgtaatgagcttt 7555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 164440 - 164188
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||| ||||   ||| || ||||||||||||||||| ||||||||||||||||| | |||||| |||||||||||||||||||||||||||||    
T  164440 gcttgcaatcaactaaagtgtgtcctttctgaccacacctgaaacacttcttctcatccttagaacaaacattactcttgtggcctttctcgccacactt 164341  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| |||||||||||||| |||||| |||| ||||||||||||||||| |  |||||  | ||||||||||||||||||||||| |  ||||||    
T  164340 gtaacaaacgatctcagcaggagcgtctctcctattgggcctcctctcatcattcaacctctgttttcccttgtcagcaggggcactgtatgatttagga 164241  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| |||||||| ||||||||||| |||||||||||||| |||||||||||    
T  164240 cgactctgctgtcctttacctcttcgttcactcatcaccttgtaatgagcttt 164188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 30539 - 30487
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    ||||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  30539 ctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 30487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 1861 - 1635
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| | |||| ||| ||||||| |||||    
T  1861 ttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaattatttcagcagtagcat 1762  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||| ||||||||||| ||||  ||| | |||||||||||||||||||||||||||||||||||||| || | ||||||||| || ||    
T  1761 ctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggacgactctgttttcccttacccctccg 1662  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
    ||||||||||||||| |||||||||||    
T  1661 ctcactcatcaccttgtaatgagcttt 1635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 8501 - 8242
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  8501 gcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatccttagtacaaacattactcttgtggccattctcgccacactt 8402  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    | ||||||| || ||| || ||||||||||| | || || |||||||||||||| || |||||| | |||||||||||||| ||||| |||||||| |||    
T  8401 ataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatacggcttcgga 8302  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||||| || |||||||| || || || |||||||||||||| ||||||||||| ||||||    
T  8301 cgactctgttgtcccttgcccctgcggtcactcatcaccttgtaatgagctttcatgtcc 8242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 18715 - 18456
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  18715 gcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatccttagtacaaacattactcttgtggccattctcgccacactt 18616  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    | ||||||| || ||| || ||||||||||| | || || |||||||||||||| || |||||| | |||||||||||||| ||||| |||||||| |||    
T  18615 ataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatacggcttcgga 18516  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||||| || |||||||| || || || |||||||||||||| ||||||||||| ||||||    
T  18515 cgactctgttgtcccttgcccctgcggtcactcatcaccttgtaatgagctttcatgtcc 18456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 127; Significance: 1e-65; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 39346 - 39120
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||||||||||||||||||||| ||   |||||| |||||||||||||||||||| ||||||||  | ||||| ||||||||||||||||    
T  39346 ttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggagcat 39247  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| || |||||| | |||||||||||||| ||||| || || |||||| |||| ||||||||||||||||||||    
T  39246 ctctcctcttgggcctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatatggtttaggaagactctgctgtcccttacctcttcg 39147  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     |||||||||||||| |||||||||||    
T  39146 ttcactcatcaccttgtaatgagcttt 39120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 217
Target Start/End: Original strand, 14753 - 14905
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| |||||||||||||| |||||||||||||| |||||||| ||||| |||||||||||  || | || |||| | | |||||    | ||||||     
T  14753 acaaacattactcttgtggccattctcgccacacttgaaacaaacaatctccgcaggagcatccttcttcttaggccgcatatcatcgaccattctctgt 14852  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
     | ||||| |||||||||||||| || |||||||| ||||| ||||| |||||    
T  14853 ttgcccttatcagcaggggcactataaggcttagggcgactctgctggccctt 14905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 180878 - 180753
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||| ||||  |||||||||||||| || ||||| || ||||||||||| |  || ||| | |||||||||||||| ||| | ||||| ||    
T  180878 gcttgcaatcagccaacacatgacccttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacattt 180779  T
Q  101 aaaacaaactatctcagcaggagcat 126  Q
      ||||||| | |||| |||||||||    
T  180778 gtaacaaacaacctcaacaggagcat 180753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 250
Target Start/End: Original strand, 5251 - 5429
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| ||||||||||| |||||  |  | ||||| |||||||||  | ||||| || |  | |||||| |||||||||||| ||| ||  | ||||    
T  5251 ttactcttatggcctttctcaccacaagtgtagcaaacaatctcagcaacaacatctttctttctaggcctcatctcatcattaactctttgtttgccct 5350  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    | |||||||| |||| ||| ||||| |||||||||||||| ||||| ||| | | |||| |||  ||||| ||||||||    
T  5351 tatcagcaggagcaccgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaaccttgtaatgagc 5429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 22413 - 22639
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||| ||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||||||||  ||||||| |||||| |||||||||    
T  22413 ttctgaccacacttgaagcatttcttctcatccttagtaaaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcaacaggagcat 22512  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| |||| ||||||||||||||||| ||||| ||  | || ||||| |||||||||||||| || |||||| |||| | |||||||||||| |||||    
T  22513 ctctcctattgggcctcctctcatcattcagtctttgatttcctttgtcggcaggggcactgtatggtttaggaagactctactgtcccttaccccttcg 22612  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
    | ||||||||||| |||||||||||||    
T  22613 cccactcatcaccatataatgagcttt 22639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 120; Significance: 2e-61; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 27 - 254
Target Start/End: Complemental strand, 62785 - 62558
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||| ||||||||||||||||| | |  ||| || |||||||||||||||||||| |||||||| ||  |||| || |||| ||||||||    
T  62785 ttctgaccacacctaaagcacttcttctcatcatggtcacatacattactcttgtggcctttctcaccacacttgaattaaacaatatcagtaggagcat 62686  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| | ||||||| |||||||||||||||||||||| |||||||| |||||||| ||||| ||||| ||||| ||    
T  62685 ctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggcttcggacgactctgctgccccttgcctctacg 62586  T
Q  227 ctcactcatcaccttataatgagctttg 254  Q
    ||||||||||||||| ||||||||||||    
T  62585 ctcactcatcaccttgtaatgagctttg 62558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 65311 - 65211
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||||| | ||||||||||||||    
T  65311 ttctgaccacacctgaagcactttttctcatctttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacaacctcagcaggagcat 65212  T
Q  127 c 127  Q
    |    
T  65211 c 65211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 253
Target Start/End: Complemental strand, 65214 - 65109
Alignment:
Q  148 catcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatg 247  Q
    ||||||| ||||||||| | ||||| |||||||||||||| || ||||| || ||||| || ||||| |||   |||| ||||||||||||||| |||||    
T  65214 catcattcagtctctgcttgcccttatcagcaggggcactatatggcttcgggcgactctgttgtccattattccttctctcactcatcaccttgtaatg 65115  T
Q  248 agcttt 253  Q
    ||||||    
T  65114 agcttt 65109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 1324 - 1098
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||||||||||||||||||  |   |||| | ||||||||||||||||| || |||||||| ||||||| |||||||| ||||||||    
T  1324 ttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgtggcctttttcaccacacttgaaacaaattatctcagtaggagcat 1225  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| || |||||  |||||||||||||||| |||||||| ||||| |||||||| || |||||||| ||||| ||    
T  1224 ctctcctcttgggcctcctctcatcattcagcctctgtttacccttgtcagcaggagcactgtatggcttcggacgactctgttgtcccttgcctctacg 1125  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
    ||||||||||||||| |||||||||||    
T  1124 ctcactcatcaccttgtaatgagcttt 1098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 8035 - 8261
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||||||||||||||||||  |   |||| | ||||||||||||||||| || |||||||| ||||||| |||||||| ||||||||    
T  8035 ttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgtggcctttttcaccacacttgaaacaaattatctcagtaggagcat 8134  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| || |||||  |||||||||||||||| |||||||| ||||| |||||||| || |||||||| ||||| ||    
T  8135 ctctcctcttgggcctcctctcatcattcagcctctgtttacccttgtcagcaggagcactgtatggcttcggacgactctgttgtcccttgcctctacg 8234  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
    ||||||||||||||| |||||||||||    
T  8235 ctcactcatcaccttgtaatgagcttt 8261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 319534 - 319760
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||||||||||||||||||||| ||   ||| || |||||||||||||||||||||||||||||  | ||||| ||| ||||||||||||    
T  319534 ttctgaccacacctgaagcacttcttctcatctttatcacagacattactcttgtggcctttctcgccacacttgtagcaaacaatcccagcaggagcat 319633  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| |||| ||||||||||||||||| || |||||| || ||||||||||||| ||||| |||||||| |||||||| |||||||| || || |||||    
T  319634 ctctcctattgggcctcctctcatcattcagcctctgcttatccttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgccccttcg 319733  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     ||||| |||||||| |||||||||||    
T  319734 atcacttatcaccttgtaatgagcttt 319760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 27 - 181
Target Start/End: Original strand, 325998 - 326151
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||| ||||||||||||||||||| ||   ||| || |||||||||||| ||||||||||||||||  | ||||| ||||||||||||||||    
T  325998 ttctgaccacacttgaagcacttcttctcatctttatcacagacattactcttgtggtctttctcgccacacttgtagcaaacaatctcagcaggagcat 326097  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcagg 181  Q
    ||||| |||| ||||||||||||||||| || |||||| ||||||||| ||||||    
T  326098 ctctcctatt-ggcctcctctcatcattcagcctctgcttacccttgttagcagg 326151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 37227 - 37456
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    ||||||||||||||||||||||||||||||||||| ||   |||||| ||||||||||||||||||||||||||||| || ||||  || |||| |||||    
T  37227 cccttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcgccacacttgaagcaaaaaatatcagtaggag 37326  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
      |||||| | || ||||||||||||||||| | ||||||| |||||||||| ||| | ||||| |||||||| |||||||| |||||||||||||||||    
T  37327 tgtctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcggcaagagcactatacggcttcggacgactctgctgtcccttacctct 37426  T
Q  224 tcgctcactcatcaccttataatgagcttt 253  Q
     || |||||||||||||| |||||||||||    
T  37427 acgttcactcatcaccttgtaatgagcttt 37456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 98622 - 98373
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| || ||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||||    
T  98622 gcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacactt 98523  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| |||||||||||||||||||||   || ||||||||||||||||| |  |||||| |||||||||||||| | ||||| || ||||| |||    
T  98522 gtaacaaacgatctcagcaggagcatctctccacttgggcctcctctcatcatttaacctctgcttacccttgtcagcatgagcactatatggcttcgga 98423  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    ||||| || |||||||||||||| |  |||||||| ||||| ||||||||    
T  98422 cgactctgttgtcccttacctctcctttcactcattaccttgtaatgagc 98373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 176252 - 176504
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||||||   ||| || ||||  |||||||| || ||||||||||||||   |  ||| || ||||||||||||||||| || ||||||||    
T  176252 gcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggcctttttcaccacactt 176351  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
     ||||| || ||||| | ||||||||||||| |  | ||||||||||||||||| ||||||||  || | ||||  ||||| ||||| ||||| || |||    
T  176352 gaaacagacaatctctgtaggagcatctctcctcctaggcctcctctcatcattcagtctctgtttaactttgttggcaggagcactatacggtttcgga 176451  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  176452 cgactctgctgtcccttacctctacgctcactcatcaccttataatgagcttt 176504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 3e-60; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 21742660 - 21742408
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacact 99  Q
    ||||||||||||| ||   ||| || |||||||||||||| ||||||||||||||||| | ||| ||| || |||||||||||||||||||| |||||||    
T  21742660 gcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatc-tcggtcacatacattactcttgtggcctttctcaccacact 21742562  T
Q  100 taaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagg 199  Q
    | || ||||  ||||||| ||||||||||||| | || ||||||||||||||||| ||||||||| |||||||||||| ||| ||||| ||||| || ||    
T  21742561 tgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagtctctgcttacccttgtcagtaggagcactatacggtttcgg 21742462  T
Q  200 acgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    |||||| | ||||||||||||||| ||||||||||||||||| |||||||||||    
T  21742461 acgactctactgtcccttacctctgcgctcactcatcaccttgtaatgagcttt 21742408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 253
Target Start/End: Complemental strand, 20833007 - 20832757
Alignment:
Q  2 cttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactta 101  Q
    ||||||||||||||    ||| || ||||||||||||||||| || ||||||||||| || |||||||| |||||||||||||||||||||||||||||     
T  20833007 cttgcaatcagctagtgtgtgtcctttctgaccacacctgaaacaattcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttg 20832908  T
Q  102 aaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggac 201  Q
     | ||||| || ||| |||||||||||||| | || || |||||||||||||| || |||||| | |||||||||||||| ||||| ||  | |||||||    
T  20832907 tagcaaacaatatcaacaggagcatctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactata-tgtttaggac 20832809  T
Q  202 gactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    |||| ||||||||||| ||||| || |||||||||||||| |||||||||||    
T  20832808 gactctgctgtcccttgcctctacggtcactcatcaccttgtaatgagcttt 20832757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 22015853 - 22015601
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||||||   ||| || ||||||||||||||||||||||||||||||||  |   |||||| ||||| || |||||||| || ||||||||    
T  22015853 gcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaaacattacttttttggcctttttctccacactt 22015754  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
     || ||||| || |  | ||||||||||||| | || ||||||||||||||||| | ||||| | |||||||||||||||| ||||| |||||||| |||    
T  22015753 gaatcaaacaatatttgtaggagcatctctcttctttggcctcctctcatcatttattctcttcttacccttgtcagcaggagcactatacggcttcgga 22015654  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| ||||||||||| || || ||||||||||||||||| |||||||||||    
T  22015653 cgactctgctgtccctttcccctacgctcactcatcaccttgtaatgagcttt 22015601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 21739118 - 21738892
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagca 125  Q
    |||||||||||||| ||||||||||||||||| | | | |||||| |||||||||||||||||||| |||||||| || ||||  ||||||| |||||||    
T  21739118 ttctgaccacacctaaagcacttcttctcatc-tcgatcacaaacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagca 21739020  T
Q  126 tctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttc 225  Q
     ||||| | || ||||||||||||||||| | ||||||| |||||||||||||| |||| || || ||||| |||||||| || |||||||||||||| |    
T  21739019 cctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcatgggcgctatatggcttcggacgactctgttgtcccttacctctgc 21738920  T
Q  226 gctcactcatcaccttataatgagcttt 253  Q
    | |||||||||||||| |||||||||||    
T  21738919 ggtcactcatcaccttgtaatgagcttt 21738892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 19857582 - 19857805
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||||||||| |||||||||||  |   ||| || ||||||||||||||||| || |||||||| || ||||| ||||| | || |||||    
T  19857582 ttctgaccacacctgaagcatttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatctcggtagaagcat 19857681  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| |  |||||| |||||||||||||||| ||||| || || ||||||||||| || |||||||||||||| ||    
T  19857682 ctctcctcttaggcctcctctcatcattcaacctctgcttacccttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcg 19857781  T
Q  227 ctcactcatcaccttataatgagc 250  Q
     |||||||||||||| ||||||||    
T  19857782 ttcactcatcaccttgtaatgagc 19857805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 259
Target Start/End: Complemental strand, 24096697 - 24096465
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||| || |||||| |||||||  |   |||| | ||||||||||||||||| || |||||||| |||||||| |||||| |||||||||    
T  24096697 ttctgaccacacctaaaacacttcctctcatctctaccacaagcattactcttgtggcctttttcaccacacttgaaacaaacaatctcaacaggagcat 24096598  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| |  |||||  | || ||||||||||| ||||| || || ||||||||||| || |||||||||| ||||||    
T  24096597 ctctcctcttgggcctcctctcatcattcatcctctgttttcctttgtcagcaggagcactataaggtttaggacgactctgttgtcccttacttcttcg 24096498  T
Q  227 ctcactcatcaccttataatgagctttgatgtc 259  Q
    ||||||| ||||||| |||||||||||| ||||    
T  24096497 ctcactcgtcaccttgtaatgagctttggtgtc 24096465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 24 - 259
Target Start/End: Original strand, 21961332 - 21961567
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    ||||||||||||||||||||||||||| ||||||| ||   |||||| || |||||||||||||| || ||||||||  ||||||| ||||||| |||||    
T  21961332 cccttctgaccacacctgaagcacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggag 21961431  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    |||||||| | || || ||||| |||||||| |   ||||| | || ||||||| ||| |||||||| |||||||||||| | |||||||||||||||||    
T  21961432 catctctcctcttgggtctcctatcatcattcatcttctgctttcctttgtcagaaggagcactgtaaggcttaggacgattctgctgtcccttacctct 21961531  T
Q  224 tcgctcactcatcaccttataatgagctttgatgtc 259  Q
     | ||||||||| | ||| |||||||||||| ||||    
T  21961532 cctctcactcattatcttgtaatgagctttggtgtc 21961567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 20 - 235
Target Start/End: Original strand, 52989042 - 52989257
Alignment:
Q  20 gtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagca 119  Q
    |||||||||||||||||||||||| |||||| ||||||| ||   |||||| || |||||||||||||| || ||||||||  ||||||| ||||||| |    
T  52989042 gtgacccttctgaccacacctgaaacacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaa 52989141  T
Q  120 ggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttac 219  Q
    |||||||||||| | || |||||||| |||||||| |   ||||| | || ||||||||||| |||||||| |||||||||||| |||||||||||||||    
T  52989142 ggagcatctctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattttgctgtcccttac 52989241  T
Q  220 ctcttcgctcactcat 235  Q
    | || | |||||||||    
T  52989242 ccctcctctcactcat 52989257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 31537105 - 31536847
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||| ||  | |||||  |   |||||| || ||||||||||||||||| ||||||||    
T  31537105 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcattttctatcatctctaccacaaacattgctcttgtggcctttctcaccacactt 31537006  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    | ||||||| ||||||| ||||||||||||| | || || ||||| |||||||| |  |||||| | || ||||||||||| ||||| || |||||||||    
T  31537005 ataacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattcatcctctgctttcctttgtcagcaggagcactataaggcttagga 31536906  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | |||||||||||||| || | ||||||||| | ||| |||||||||||| ||||    
T  31536905 cgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtc 31536847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 259
Target Start/End: Complemental strand, 20074798 - 20074559
Alignment:
Q  20 gtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagca 119  Q
    ||||||||||||||||||||||||||||||| ||||||| ||  ||||||| || ||||||||||||||||| ||||||||  |||| || |||||||      
T  20074798 gtgacccttctgaccacacctgaagcacttcctctcatctttactacaaacattgctcttgtggcctttctcaccacacttgtaacacacaatctcagtg 20074699  T
Q  120 ggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttac 219  Q
    |||||||||||| | ||  ||||||| |||||| | |   ||||| | || ||||||||||  |||||||| |||||||||||| | |||||||||||||    
T  20074698 ggagcatctctcctcttaagcctcctgtcatcactcatcttctgctttcctttgtcagcagaagcactgtaaggcttaggacgattctgctgtcccttac 20074599  T
Q  220 ctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    | || | ||||||||| | ||| |||||||||||| ||||    
T  20074598 ccctcctctcactcattatcttgtaatgagctttggtgtc 20074559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 259
Target Start/End: Original strand, 20297684 - 20297923
Alignment:
Q  20 gtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagca 119  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||   |||||| ||||||||||||| |||||| ||||||||  ||||||| |||||||||    
T  20297684 gtgacccttctaaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtggcatttctcaccacacttgtaacaaacaatctcagca 20297783  T
Q  120 ggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttac 219  Q
    |||||||||||| | || |||||||| ||||||   |   ||||  | |||||||||| ||| |||||||| |||||||||||| | || ||||||||||    
T  20297784 ggagcatctctcctcttgggcctcctgtcatcacccatcttctgttttcccttgtcagtaggagcactgtaaggcttaggacgattctgatgtcccttac 20297883  T
Q  220 ctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    | || | ||||||||| | ||| |||||||||||| ||||    
T  20297884 ccctcctctcactcattatcttgtaatgagctttggtgtc 20297923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 48426155 - 48426413
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  48426155 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 48426254  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| |||||||||||||| | || |||||||| ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||    
T  48426255 gtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttagga 48426354  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | || ||||||||||| || | ||||||||| | ||| |||||||||||| ||||    
T  48426355 cgattctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtc 48426413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 38909934 - 38909676
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  38909934 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 38909835  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| |||||||||||||| | || |||||||| ||||||   |  |||||| | || ||||||||||| |||||||| || ||||||    
T  38909834 gtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcctttgtcagcaggagcactgtaaggtttagga 38909735  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | || ||||||||||| || | | ||||||| | ||| |||||||||||| ||||    
T  38909734 cgattctgttgtcccttacccctcctcccactcattatcttgtaatgagctttggtgtc 38909676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 37680331 - 37680589
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  37680331 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 37680430  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| |||||| ||||||| | || |||||||| ||||||   |   ||||| | || ||||||| ||| |||||||| |||||||||    
T  37680431 gtagcaaacaatctcaacaggagtatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagtaggagcactgtaaggcttagga 37680530  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | || ||||||||||| || | ||||||||| | ||| |||||||||||| ||||    
T  37680531 cgattctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtc 37680589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 250
Target Start/End: Original strand, 16379407 - 16379594
Alignment:
Q  63 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 162  Q
    |||||||| ||||| |||||||||||||| |||||   | | ||||| |||||||||  | ||||| || |  ||||||||||||||||||||| |||||    
T  16379407 gtacaaacattacttttgtggcctttctcaccacaagcatagcaaacaatctcagcaacaacatctttctttctcggcctcctctcatcattaactctct 16379506  T
Q  163 gcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    |  | ||||| ||||||| ||||||||| |||||||||||||| || || ||||| ||| | |||||| |||  ||||| ||||||||    
T  16379507 gtttgcccttatcagcagaggcactgtaaggcttaggacgactctgttgacccttgcctttccgctcattcacaaccttgtaatgagc 16379594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 218
Target Start/End: Complemental strand, 21228600 - 21228447
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| |||||||||||||||||||||||||| || |||||||| ||||| |||||||||||  || | || |||| ||| |||||    | ||||||     
T  21228600 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctgt 21228501  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 218  Q
     ||||||| |||||||||||||| || |||||||| ||||| ||||| ||||||    
T  21228500 ttacccttatcagcaggggcactatagggcttagggcgactctgctggccctta 21228447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 250
Target Start/End: Original strand, 18273114 - 18273298
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcc 165  Q
    ||||| |||||||||||||| ||||| ||||||||  ||||||| ||||||| |||| |||||||  | || || |||||||||||||| | ||| |||     
T  18273114 caaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 18273213  T
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
      || |||||| |||| |||||||| ||||| ||||||| |||||| |||||    || ||||||||| | ||||||||||||||    
T  18273214 cccctttgtcaacaggagcactgtagggcttcggacgaccttgctgacccttgttcctccgctcactcctaaccttataatgagc 18273298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 41350614 - 41350560
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  41350614 tacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttacc 41350560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 21045158 - 21045046
Alignment:
Q  105 caaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgac 204  Q
    ||||| |||||||||| ||||||| || |  | || |||||||||||||||| ||| ||| | ||||| |||||||| |||||||| ||||| |||||||    
T  21045158 caaacaatctcagcagtagcatctttctttcttggtctcctctcatcattaactctttgcttgcccttatcagcaggagcactgtaaggctttggacgac 21045059  T
Q  205 tttgctgtccctt 217  Q
    ||||||| |||||    
T  21045058 tttgctgaccctt 21045046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 16347541 - 16347490
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  16347541 tacccttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16347490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 16354189 - 16354138
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  16354189 tacccttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16354138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 51330430 - 51330384
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  51330430 tcagcaggggcactgtacggcttaggacgactctgctgtcccttacc 51330384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 33387975 - 33387924
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  33387975 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 33387924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 20853868 - 20853619
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||| ||||  |||||||||||||| || ||||| || ||||||||||| | ||| ||| | |||||||||||||| ||| | ||||| ||    
T  20853868 gcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttcacaccacattt 20853769  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| |  ||| ||||||||| ||||   || |||  |||||||||||| | ||| ||  | || |||| || ||| |||||||| ||||| ||     
T  20853768 gtaacaaacaacatcaacaggagcatttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagtaggagcactgtagggcttcggg 20853669  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    |||||   ||| ||||||   |||  ||| ||||||||||||||||||||    
T  20853668 cgactactctgacccttattccttttctcgctcatcaccttataatgagc 20853619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 250
Target Start/End: Original strand, 22117102 - 22117214
Alignment:
Q  138 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatca 237  Q
    ||||||||||||||||||| ||| ||  | ||||| ||||||||  ||||||| ||||| |||||||||||||| ||||| ||| | | |||| |||  |    
T  22117102 ggcctcctctcatcattaactctttgttttcccttatcagcaggaacactgtaaggctttggacgactttgctgacccttgcctttcctctcattcaaaa 22117201  T
Q  238 ccttataatgagc 250  Q
    |||| ||||||||    
T  22117202 ccttgtaatgagc 22117214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 218
Target Start/End: Complemental strand, 17042057 - 17041907
Alignment:
Q  67 aaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcct 166  Q
    |||| |||||||||||||||||| ||||||| || |||||||  ||||| | |||||||||  || | || |||| ||| |||||    | ||||||| |    
T  17042057 aaacattactcttgtggcctttcccgccacagttgaaacaaaa-atctccgaaggagcatccttcttcttaggccgcctatcatcgaccattctctgctt 17041959  T
Q  167 acccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 218  Q
     ||||| |||||||||||||| || |||||||| ||||| ||||| ||||||    
T  17041958 gcccttatcagcaggggcactataaggcttagggcgactctgctggccctta 17041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 19109791 - 19109834
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  19109791 tcagcaggggcactgtacggcttaggacgactctgttgtccctt 19109834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 21833723 - 21833766
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  21833723 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 21833766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 21752465 - 21752527
Alignment:
Q  168 cccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctca 230  Q
    ||||| ||||||| ||||||||| |||||||||||||| ||||| |||||| || ||||||||    
T  21752465 cccttatcagcagtggcactgtaaggcttaggacgactctgctgacccttagcttttcgctca 21752527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 21842633 - 21842676
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| |||||||||||||||||||||||||| || ||||||||    
T  21842633 tcagcgggggcactgtacggcttaggacgactctgatgtccctt 21842676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 22400741 - 22400784
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||    
T  22400741 tcagcaggggcactgtacagcttaggacgactctgctctccctt 22400784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 22402010 - 22402060
Alignment:
Q  168 cccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 218  Q
    ||||| ||||||||||||||||| |||||||| ||||| ||||| ||||||    
T  22402010 cccttatcagcaggggcactgtaaggcttagggcgactctgctgaccctta 22402060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 54335 - 54571
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    |||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||| |||    
T  54335 cccttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaagag 54434  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    ||| ||   |||| ||||||||||||||||| |  |||||| | || ||||||||||| ||||| |||||||| |||||||| || ||||| || |  ||    
T  54435 catttcatctattgggcctcctctcatcattcaacctctgcttccctttgtcagcaggagcactatacggctttggacgactctgatgtcctttgctcct 54534  T
Q  224 tcgctcactcatcaccttataatgagctttgatgtcc 260  Q
    ||| |||||||||||||||||||||||||| ||||||    
T  54535 tcgatcactcatcaccttataatgagctttcatgtcc 54571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 31 - 250
Target Start/End: Original strand, 799 - 1018
Alignment:
Q  31 gaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctct 130  Q
    |||||||||||||| ||||||||||||| ||   ||| || ||||||||||||||||||| |||||||||  | ||||| ||||||||||||||||||||    
T  799 gaccacacctgaagtacttcttctcatctttatcacagacattactcttgtggcctttctagccacacttgtagcaaacaatctcagcaggagcatctct 898  T
Q  131 catattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctca 230  Q
    | | || ||||||||||||||||| | ||||||| |||||||||||||||| ||||| || || ||||||||||| || |||||||||||||| ||||||    
T  899 cctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcgctca 998  T
Q  231 ctcatcaccttataatgagc 250  Q
    ||||||||||| ||||||||    
T  999 ctcatcaccttgtaatgagc 1018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 15363 - 15589
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| | || |  ||||||||||||||||    
T  15363 ttctgaccacacctgaagcacttcttctcgtccttagtacaaacattactcttgtggcctttctcgccacacttatagcagaaaatctcagcaggagcat 15462  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| |||| ||||||||||||||||| |  |||||| | | |||||||||||| ||||| |||||||| |||||||| || ||||| || |   ||||    
T  15463 ctctcctattgggcctcctctcatcatttaacctctgctttcgcttgtcagcaggagcactatacggcttcggacgactctgttgtcctttgctcattcg 15562  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     |||||||||||||| |||||||||||    
T  15563 atcactcatcaccttgtaatgagcttt 15589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 50370 - 50622
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacact 99  Q
    |||| |||||||||||   ||| || ||||||||||||||||| |||||||||||||| | ||| |||||| |||||||||||| |||| || |||||||    
T  50370 gcttacaatcagctaaggtgtgtcctttctgaccacacctgaaacacttcttctcatc-tcggtcacaaacattactcttgtggtctttttcaccacact 50468  T
Q  100 taaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagg 199  Q
    | |||||||| || |||| ||||||||||||| | || |||||||||||||||||   ||| ||| |||||||||||||||||||||| |||||||| ||    
T  50469 tgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattccatctatgcttacccttgtcagcaggggcactatacggcttcgg 50568  T
Q  200 acgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    || ||| ||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  50569 accactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagcttt 50622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 27 - 260
Target Start/End: Complemental strand, 896 - 663
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||||||||||||||||||  |   |||||||||||||||||||||||| || |||||||| || ||||| ||||| | ||||||||    
T  896 ttctgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttttcaccacacttgaagcaaacaatctcggtaggagcat 797  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| |  |||| | |||||||||||||||| ||| | |||||||| |||||||| || |||||||||||||| ||    
T  796 ctctcctcttgggcctcctctcatcatttaacctcttcttacccttgtcagcaggagcattatacggcttcggacgactctgttgtcccttacctctgcg 697  T
Q  227 ctcactcatcaccttataatgagctttgatgtcc 260  Q
     |||||||||||||| |||||||||||| |||||    
T  696 ttcactcatcaccttgtaatgagctttgttgtcc 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 5446 - 5698
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacact 99  Q
    |||| |||||||||||   ||| || |||||||||||||||||||||||||||||||| | ||| |||||| ||||||||||||||||| || |||||||    
T  5446 gcttacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatc-tcggtcacaaacattactcttgtggcctttttcaccacact 5544  T
Q  100 taaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagg 199  Q
    | |||||||| || |||| ||||||||||||| | || ||||||||||||||||| | ||||||| |||||||||||| ||||||||||||||||||  |    
T  5545 tgaaacaaacaatatcagtaggagcatctctcctctt-ggcctcctctcatcattcaatctctgcttacccttgtcagtaggggcactgtacggcttccg 5643  T
Q  200 acgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
    | |||| |||||||||||  ||||  ||||||||||||| || ||||||||||||    
T  5644 atgactctgctgtcccttgactctatgctcactcatcactttgtaatgagctttg 5698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 16902 - 17155
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacact 99  Q
    ||||||||||||| ||   ||| || |||||||||||||| ||||||||||||||||| | | | ||| || |||||||||||||||||||| |||||||    
T  16902 gcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatc-tcgatcacacacattactcttgtggcctttctctccacact 17000  T
Q  100 taaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagg 199  Q
    | |||||||  ||||||| ||||||||||||| | || ||||||||||||||||| ||| ||||| |||||||||| ||||| ||||| |||||||| ||    
T  17001 tgaaacaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagtttctgcttacccttgtcggcaggagcactatacggcttcgg 17100  T
Q  200 acgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
    |||||| || |||||||| ||| | ||||||||||||||||| ||||||||||||    
T  17101 acgactctgttgtcccttgcctttgcgctcactcatcaccttgtaatgagctttg 17155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 5248 - 4996
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||| |||||||||||   ||| ||||||||||||||||||||||||||||||||||||||   ||| || ||||||||||||||||| |||||||||||    
T  5248 gcttacaatcagctaaagtgtgtcccttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcctttttcgccacactt 5149  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| ||||||||||||||||||||| |  | |||| |||||||| ||| || || ||| | |||||||||||||| ||||| || || ||||||    
T  5148 gtagcaaacaatctcagcaggagcatctctcctcctaggccacctctcattattcagcctttgctttcccttgtcagcaggagcactatatggtttagga 5049  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| | || ||| ||||||||||| |||||||||||||| |||||||||||    
T  5048 cgactctactttcctttacctcttcgttcactcatcaccttgtaatgagcttt 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 8879 - 9127
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| || ||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||| ||||||||||||||    
T  8879 gcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggccattctcgccacactt 8978  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    | ||||||| |||||| |||||||||||||| | || || || ||||||||||| ||  ||||| | || ||||||||||| ||||| |||||||| |||    
T  8979 ataacaaacaatctcatcaggagcatctctcctcttgggtcttctctcatcattcagcttctgcttccctttgtcagcaggagcactatacggcttcgga 9078  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgag 249  Q
    ||||| |||||||| || |  ||||| ||||||||||||| ||||||||    
T  9079 cgactctgctgtcctttgctccttcgatcactcatcacctaataatgag 9127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 109; Significance: 7e-55; HSPs: 4)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 115827 - 116027
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  115827 gcttgcaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacactt 115926  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
    ||| |||||||| ||||||||||  |||||    || ||||| ||||||||||| ||||  ||| | |||||  |||||||||| |||||||||||||||    
T  115927 aaagcaaactatttcagcaggagtgtctcttcccttgggccttctctcatcattcagtcgttgctttcccttaccagcaggggcgctgtacggcttagga 116026  T
Q  201 c 201  Q
    |    
T  116027 c 116027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 107643 - 107600
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| |||||||||||||||||||||||||| || ||||||||    
T  107643 tcagcgggggcactgtacggcttaggacgactctgttgtccctt 107600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 8553 - 8602
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 124  Q
    ||||||||||||||||||||||| |||||||| |  ||||||||| ||||    
T  8553 ctcttgtggcctttctcgccacaattaaaacagataatctcagcaagagc 8602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 93933 - 93808
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||| || ||||  ||||| |||||||| || ||||| || ||||||||||| |  || ||| | |||||||||||||| ||| | ||||| ||    
T  93933 gcttgcaatccgccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacattt 93834  T
Q  101 aaaacaaactatctcagcaggagcat 126  Q
      ||||||| | |||| |||||||||    
T  93833 gtaacaaacaacctcaacaggagcat 93808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 109; Significance: 7e-55; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 4492 - 4244
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||| |||||||||||   ||| || |||||||||||||||||||| |||||||||||  |   |||||| |||||||| ||||||||||||||||||||    
T  4492 gcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaaacattactcttttggcctttctcgccacactt 4393  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
     || ||||| || |||| ||||||||||||| | || ||||||||||||||||| |  |||||| |||||||||||||||| ||| |||||||||| |||    
T  4392 gaagcaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcatttaaactctgcttacccttgtcagcaggagcagtgtacggcttcgga 4293  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgag 249  Q
    ||||| || |||||||| ||||| || |||||||||||||| |||||||    
T  4292 cgactctgttgtcccttgcctctacgttcactcatcaccttgtaatgag 4244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 17105 - 16979
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   |||||||||||  ||||||| ||| || |||||| | ||||  | ||||||  | ||||||||||||||||| ||||| ||    
T  17105 gcttgcagtcagctaatgtgtgacccttcttgccacaccagaaacatttcttcacctcctctggacaaacagtgctcttgtggcctttctcaccacaatt 17006  T
Q  101 aaaacaaactatctcagcaggagcatc 127  Q
     ||||||   |||||||||||| ||||    
T  17005 gaaacaagtaatctcagcaggaacatc 16979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 5705 - 5954
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacact 99  Q
    |||| |||||||||||   ||| || |||||||||||||| ||||||||||||||||| | | | ||| ||||||||||||||||||||||| |||||||    
T  5705 gcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctcatc-tcgatcacacacgttactcttgtggcctttctcaccacact 5803  T
Q  100 taaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagg 199  Q
    | || |||| |||||||| ||||||||||||| | ||  |||||||||||||||| | ||||||| |||||||||||||||||   || |||||||| ||    
T  5804 tgaagcaaattatctcagtaggagcatctctcctcttaagcctcctctcatcattcaatctctgcttacccttgtcagcaggg---ctatacggcttcgg 5900  T
Q  200 acgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    |||||| || |||||||||||||| ||||||||||||||||| |||| ||||||    
T  5901 acgactatgttgtcccttacctctgcgctcactcatcaccttgtaataagcttt 5954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 259
Target Start/End: Complemental strand, 11763 - 11524
Alignment:
Q  20 gtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagca 119  Q
    ||||||||||||||||||||||||||||||| | |||||  |   ||| || |||||||||||||||||||  ||||||||  | || || |||||| |     
T  11763 gtgacccttctgaccacacctgaagcacttcctatcatctcttccacatacattactcttgtggcctttcttaccacacttgtatcatacaatctcatct 11664  T
Q  120 ggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttac 219  Q
    || ||||||||| | || ||| |||| ||||||   |   ||||| | || ||||||||| | ||| |||| |||||||||||| | || ||||||||||    
T  11663 ggtgcatctctcctcttgggcttcctatcatcacccatcttctgctttcctttgtcagcaagagcaatgtaaggcttaggacgattctgttgtcccttac 11564  T
Q  220 ctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    | || | ||||||||| | ||| |||||||||||| ||||    
T  11563 ccctcctctcactcattatcttgtaatgagctttggtgtc 11524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 42989 - 43215
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagca 125  Q
    ||||||| |||||| ||||||||||||||||| | ||| |||||| |||||||||||||||||||| | |||||| ||||||| |||||||| |||||||    
T  42989 ttctgactacacctaaagcacttcttctcatc-tcggtcacaaacattactcttgtggcctttctcacaacacttgaaacaaattatctcagtaggagca 43087  T
Q  126 tctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttc 225  Q
    |||||| | || ||||||||||||||||| |  |||||  |||||||||||||||||||||| |||||||| |||||||| | ||||||||| ||||  |    
T  43088 tctctcctcttaggcctcctctcatcattcaacctctgtttacccttgtcagcaggggcactatacggcttcggacgactctactgtcccttgcctcggc 43187  T
Q  226 gctcactcatcaccttataatgagcttt 253  Q
    ||| |||||||||||| |||||||||||    
T  43188 gcttactcatcaccttgtaatgagcttt 43215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 34628 - 34854
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||| |||||||||||||||||||||||||||  |   ||| || |||||||||||||||||||| |||||||| |||||||| || |||| ||||||||    
T  34628 ttctaaccacacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttctcaccacacttgaaacaaacaatgtcagtaggagcat 34727  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| |  || ||| |||||||||||||||| ||||| ||| |||| |||||||| ||||||||||| ||||| ||    
T  34728 ctctcctcttgggcctcctctcatcatttaacctttgcttacccttgtcagcaggagcactatacagcttcggacgactctgctgtcccttgcctctgcg 34827  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     |||||||||||||| |||||||||||    
T  34828 ttcactcatcaccttgtaatgagcttt 34854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 70373 - 70626
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacact 99  Q
    ||||||||||||| ||   ||| || ||||| ||||| ||||| |||||||||||||| | ||| ||| || |||||||||||||||||||| |||||||    
T  70373 gcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatc-tcggtcacacacattactcttgtggcctttctcaccacact 70471  T
Q  100 taaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagg 199  Q
    |||| ||||  ||||||| ||||||||||||| | || ||||||||||||||||| || |||||  |||| ||||||||||| ||||| ||||| || ||    
T  70472 taaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcgg 70571  T
Q  200 acgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
    |||||| || |||||||||||||| |||||||||||||| |||||||||||||||    
T  70572 acgactctgttgtcccttacctctgcgctcactcatcactttataatgagctttg 70626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 153757 - 154009
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||| |||||||||||   ||| || ||||||||||||||||||||||||||||||||  |   ||| || |||||||| |||| ||| || ||||||||    
T  153757 gcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacagacattactcttatggcttttttcaccacactt 153856  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
     || ||||| |||||||  |||||||||||| | || ||||||||||||||||| |||| |||| |||||||||||||||| ||||| || ||||| |||    
T  153857 gaagcaaacaatctcagtgggagcatctctcctcttgggcctcctctcatcattcagtcgctgcttacccttgtcagcaggagcactatatggcttcgga 153956  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| |||||||||||||||||| | |||| ||||||||| |||||||||||    
T  153957 cgactctgctgtcccttacctctttgttcacccatcaccttgtaatgagcttt 154009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 24 - 254
Target Start/End: Complemental strand, 831 - 601
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    |||||||||||||||||||||||||||||||||||  |   |||||| ||||||||||||||||| || |||||||| || ||| | || || | |||||    
T  831 cccttctgaccacacctgaagcacttcttctcatctctatcacaaacattactcttgtggcctttttcaccacacttgaagcaatcaatgtccgtaggag 732  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    |||||||| | || ||||||||||||||||| |  |||||| | |||||||| ||||| ||||| |||||||| |||||||||||||||||||| |||||    
T  731 catctctcctcttgggcctcctctcatcatttaacctctgcttccccttgtcggcaggagcactatacggcttcggacgactttgctgtcccttgcctct 632  T
Q  224 tcgctcactcatcaccttataatgagctttg 254  Q
      | |||||||||||||| ||||||||||||    
T  631 atgttcactcatcaccttgtaatgagctttg 601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 103 - 253
Target Start/End: Original strand, 2198 - 2348
Alignment:
Q  103 aacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacg 202  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||| |  || ||| | || ||||||| ||||||||||||||| ||||||||    
T  2198 aacaaactatctcagcaggagcatctctcctattccgcctcctctcatcattcaacctttgctttcctttgtcagtaggggcactgtacggtttaggacg 2297  T
Q  203 actttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2298 actctgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 2348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 555 - 329
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||||||||||||||||||  |   ||||||  |||| ||||||||||||||||||||||| |||||||| || ||   ||||||||    
T  555 ttctgaccacacctgaagcacttcttctcatctgtatcacaaacactacttttgtggcctttctcgccacacttgaaacaaacaatatctataggagcat 456  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||| ||||||||||| |  |||||| |||||||||||| ||| ||||| |||||||| |||||||| ||||||||||||||||| ||    
T  455 ctctcctcttgggccttctctcatcatttaacctctgcttacccttgtcagaaggagcactatacggcttcggacgactgtgctgtcccttacctctacg 356  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     | |||||||||||| |||||||||||    
T  355 tttactcatcaccttgtaatgagcttt 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 297 - 71
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||| |||||||||||||||||||  |   ||| || ||||||||||||||||||||||||||||| || ||||| || |||| |||||| |    
T  297 ttctgaccacacatgaagcacttcttctcatctctatcacagacattactcttgtggcctttctcgccacacttgaagcaaacaatatcagtaggagcct 198  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||  | || ||||||||||||||||| |  |||||| |||||||||||||||| ||| | |||||||| |||||||| ||||||||||| ||||| ||    
T  197 ctctgctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcattttacggcttcggacgactctgctgtcccttgcctctgcg 98  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     |||||||||||||| |||||||||||    
T  97 ttcactcatcaccttgtaatgagcttt 71  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 33 - 250
Target Start/End: Original strand, 29824 - 30041
Alignment:
Q  33 ccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctca 132  Q
    ||||||| ||| |||||||||||||| | | ||||||| |||||||||||||| || || |||||||| ||| | |||||||||  |||||||||||||     
T  29824 ccacaccggaaacacttcttctcatcatggttacaaacattactcttgtggcccttttcaccacacttgaaatagactatctcaataggagcatctctcc 29923  T
Q  133 tattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcact 232  Q
    |  | ||||||||||||||||| ||||||||| |||| ||||||||||| |||||  |||| || |||||||| ||||||||||| ||||| ||||||||    
T  29924 tcctaggcctcctctcatcattcagtctctgcttacctttgtcagcaggagcactagacggtttcggacgactctgctgtcccttgcctctacgctcact 30023  T
Q  233 catcaccttataatgagc 250  Q
    ||||||||||||||||||    
T  30024 catcaccttataatgagc 30041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 65 - 253
Target Start/End: Complemental strand, 5877 - 5689
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| ||||||||||||||||| || ||||||||  || |||| || |||| ||||||||||||| | || ||||||||||||||||| |||||||||    
T  5877 acaaacattactcttgtggcctttttcaccacacttgtaataaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcagtctctgc 5778  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
     |||||||||||||||| ||||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  5777 ttacccttgtcagcaggagcactatacggcttcggatgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagcttt 5689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 65 - 253
Target Start/End: Original strand, 115953 - 116141
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| ||||||||||||||||| || |||||| | |||||||| || |||| ||||||||| ||| | || ||||||||||||||||| ||||||| |    
T  115953 acaaacattactcttgtggcctttttcaccacacatgaaacaaacaatatcagtaggagcatccctcctcttaggcctcctctcatcattcagtctcttc 116052  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
     |||||||||||||||| ||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  116053 ttacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagcttt 116141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 253
Target Start/End: Complemental strand, 1240 - 1059
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||| |||||||||||| || ||||| |||||||| || |||| || ||||||||||||| |  | ||||||||||||||||| ||||||||| ||||||    
T  1240 ttacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgcttaccct 1141  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| |||| ||||| ||||| || |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  1140 tgtcaacaggagcactatacggtttcggacgactctgctgtcccttacctctgcgctcactcatcaccttataatgagcttt 1059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 72 - 253
Target Start/End: Complemental strand, 28253 - 28072
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||| |||||||||||| || ||||| |||||||| || |||| || ||||||||||||| |  | ||||||||||||||||| ||||||||| ||||||    
T  28253 ttacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgcttaccct 28154  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| |||| ||||| ||||| || |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  28153 tgtcaacaggagcactatacggtttcggacgactctgctgtcccttacctctgcgctcactcatcaccttataatgagcttt 28072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 86 - 253
Target Start/End: Original strand, 3215 - 3382
Alignment:
Q  86 tttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggca 185  Q
    |||||| |||||||| || ||||  ||||||| ||||||||||||| | || ||||||||||||||||| | ||||||| ||||||||||||||||||||    
T  3215 tttctccccacacttgaagcaaataatctcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcagcaggggca 3314  T
Q  186 ctgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    || |||||||| |||||||| || |||||||| ||||| |||||||||||||||||||||||||||||    
T  3315 ctatacggcttcggacgactctgttgtcccttgcctctgcgctcactcatcaccttataatgagcttt 3382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 5344 - 5570
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||| ||||||||||||||||||||||||||| ||   ||| || |||||| |||||||||||||||| |||||  | ||||| ||||||||||||||||    
T  5344 ttctaaccacacctgaagcacttcttctcatctttatcacagacattactcctgtggcctttctcgccgcacttgtagcaaacaatctcagcaggagcat 5443  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| |  | ||||||||||||||||| |  |||||  | ||||| |||||||| ||||| || || ||||||||||| || ||||| |||||||||||    
T  5444 ctctcctcgtgggcctcctctcatcattcaacctctgttttcccttatcagcaggagcactatatggtttaggacgactctgttgtcctttacctcttcg 5543  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     |||||||||||||| |||||||||||    
T  5544 ttcactcatcaccttgtaatgagcttt 5570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 70 - 259
Target Start/End: Complemental strand, 33342 - 33153
Alignment:
Q  70 cgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacc 169  Q
    |||| |||||||||||||| || |||||||| |||||||| || ||| |||||||||||||| | || ||||||||||||||||| |  |||||  | ||    
T  33342 cgttgctcttgtggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattcatcctctgttttcc 33243  T
Q  170 cttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
     ||||||||||| |||||||| || ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  33242 tttgtcagcaggagcactgtatggtttaggacgactctgctgtcccttaccccttcgctcactcatcaccttgtaatgagctttggtgtc 33153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 6070 - 6321
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| || ||||||||||| ||||||||||||||||||||  |   ||| || ||||||||||||||||| || ||||||||    
T  6070 gcttgcaatcagctagtgtgtgtcctttctgaccacatctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacactt 6169  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
     || ||||| || |||| | ||||||||||| | || ||||||||||||||||| |  || ||| |||||||||||| ||| ||||| |||||||| |||    
T  6170 gaagcaaacaatgtcagtaagagcatctctcctcttgggcctcctctcatcatttaacct-tgcttacccttgtcagtaggagcactatacggcttcgga 6268  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||    
T  6269 cgactctgctgtcccttgcctctgcgttcactcatcaccttgtaatgagcttt 6321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 92; Significance: 9e-45; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 27 - 250
Target Start/End: Complemental strand, 9785 - 9562
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||||||||||||||||||||||||   ||| || |||||||||||||| ||||| ||||||||  | ||||| || |||||||||||||    
T  9785 ttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcccttctcaccacacttgtagcaaacaatatcagcaggagcat 9686  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| |  || ||| | ||||| |||||| | ||||| || || |||||| |||| |||||||| |||||||||||    
T  9685 ctctcctgtttggcctcctctcatcattcatcctttgctttcccttatcagcaagagcactatatggtttaggatgactctgctgtcctttacctcttcg 9586  T
Q  227 ctcactcatcaccttataatgagc 250  Q
     |||||||||||||| ||| ||||    
T  9585 ttcactcatcaccttgtaaagagc 9562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 23913 - 23774
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||||||||| |||||  || |||| || |||||| || ||| |||| || | || |||| ||| ||||||   | ||||||  | ||||    
T  23913 ttactcttgtggcctttctcaccacaagtataacagacaatctcaacatgagtatctttcttcttaggccacctatcatcaaccattctctgtttgccct 23814  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||||||| |||||||| |||||||||||||| |||||    
T  23813 tatcagcaggagcactgtatggcttaggacgactctgctg 23774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 75 - 253
Target Start/End: Complemental strand, 1452 - 1274
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgt 174  Q
    |||||||||||||| || ||||||||  |||| || ||||||||||||||||||||| | || |||||||| |||||||| | | ||||  | |||||||    
T  1452 ctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggagcatctctcctcttgggcctcctatcatcattcattttctgttttcccttgt 1353  T
Q  175 cagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||||||| | ||||||||||||||| |||||||||||    
T  1352 cagcaggagcactgtaaggcttaggacgactctgctgtcccttacctctcctctcactcatcaccttgtaatgagcttt 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 1646 - 1388
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||| ||||||||||||||||||||||||||| ||||||| ||   |||||| ||||||||||| |||||||| ||||||||    
T  1646 gcttgcattcagctaaactgtgtcccttctgaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtgtcctttctcaccacactt 1547  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      ||||||| ||||||| ||||||||||||| | || |||||||| |||||| | |   ||||| | || ||||||||||| |||||||| |||||| ||    
T  1546 gtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcactcatcttctgctttcctttgtcagcaggagcactgtaaggcttatga 1447  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | |||||||||||||| || | ||||||||| |  || |||||||||||| ||||    
T  1446 cgattctgctgtcccttacccctcctctcactcattatgttgtaatgagctttggtgtc 1388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 9034 - 8808
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||||||||||||||||||||||||||   ||| || ||||||||||||| |||||| ||||||||  | ||||| |||| ||||| |||||    
T  9034 ttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcttttctcaccacacttgtagcaaacaatcttagcagaagcat 8935  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| || |||||| | |||||||| ||||| ||||| || || ||| ||| ||| |||| ||| |||||||||||    
T  8934 ctctcctcttgggcctcctctcatcattcagcctctgctttcccttgtctgcaggagcactatatggtttatgacaactctgctatcctttacctcttcg 8835  T
Q  227 ctcactcatcaccttataatgagcttt 253  Q
     |||||||| ||||| | |||||||||    
T  8834 ttcactcataaccttgtcatgagcttt 8808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 42000 - 42258
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  42000 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 42099  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| |||||||||||||| | || |||||||| ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||    
T  42100 gtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttagga 42199  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||| | || ||||||||||| || | ||||||||| | |||||||||||||||| ||||    
T  42200 cgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtc 42258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 51916 - 52165
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacact 99  Q
    ||||||||| ||||||   ||| || |||| ||||||||| ||||||||||||||||| | | | ||| || |||||||||||||||||||| |||||||    
T  51916 gcttgcaataagctaaagtgtgtcctttcttaccacacctaaagcacttcttctcatc-tcgatcacatacattactcttgtggcctttctcaccacact 52014  T
Q  100 taaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagg 199  Q
    | ||||| |  ||||||| ||||||||||||| |  | ||||||||||||||||| || |||||  |||| ||||||||||| ||||| ||| | || ||    
T  52015 tgaaacagataatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacagtttcgg 52114  T
Q  200 acgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    ||| || ||||||||||||||||| |||||||||||||| |||||||||||    
T  52115 acggctctgctgtcccttacctctgcgctcactcatcactttataatgagc 52165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 4343 - 4091
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacact 99  Q
    ||||||||||||| ||   ||| || |||||||||||||| ||||||||||||||||| | | | ||| || ||||| |||| | ||||||| |||||||    
T  4343 gcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatc-tcgatcacacacattacttttgtagtctttctcaccacact 4245  T
Q  100 taaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagg 199  Q
    | || ||||  ||||||| ||||||||||||| | || ||||||||||||||||| |  |||||  |||| ||||||||||| ||||| ||||| || ||    
T  4244 tgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgtttacctttgtcagcaggagcactatacggtttcgg 4145  T
Q  200 acgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    |||||| | ||||||||||||||| |||||||||||||| ||||||||||||||    
T  4144 acgactctactgtcccttacctctgcgctcactcatcactttataatgagcttt 4091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 259
Target Start/End: Original strand, 745 - 984
Alignment:
Q  20 gtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagca 119  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||   |||||| || |||||||||||||| || ||||||||  ||||||| ||||||| |    
T  745 gtgacccttctgaccgcacctgaagcacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaa 844  T
Q  120 ggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttac 219  Q
    |||||||||||| | || |||||||| |||||| | |   ||| | | || ||||||||||| |||||||| |||||||||||| | |||||||||||||    
T  845 ggagcatctctcctcttaggcctcctatcatcaatcaacttctactttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttac 944  T
Q  220 ctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    | || | ||||||||| | ||| |||||||||||| ||||    
T  945 ccctcctctcactcattatcttgtaatgagctttggtgtc 984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 259
Target Start/End: Complemental strand, 514369 - 514134
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    ||||||||||||||||||||||||||| |||| || ||   |||||| || ||||||||||||||||| ||||||||  ||||||| ||||||| |||||    
T  514369 cccttctgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggag 514270  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    |||||||| | || |||||||| |||||||| |   ||| | | || ||||||||||| ||||| || |||||||||||| | |||||||||||||| ||    
T  514269 catctctcctcttaggcctcctatcatcattcatcttcttctttcctttgtcagcaggagcactttaaggcttaggacgattctgctgtcccttacccct 514170  T
Q  224 tcgctcactcatcaccttataatgagctttgatgtc 259  Q
     | ||||||||| | ||| |||||||||||| ||||    
T  514169 cctctcactcattatcttgtaatgagctttggtgtc 514134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 27 - 249
Target Start/End: Complemental strand, 885 - 663
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    |||||||||||| |||||||||||||||||||  |   ||| || ||||||||||||||||| || |||||||| || ||||| || ||   ||||||||    
T  885 ttctgaccacacatgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatatccataggagcat 786  T
Q  127 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 226  Q
    ||||| | || ||||||||||||||||| |||| |||| |||||||||||||||| | ||| || ||||| |||||||| || |||||||||||||| |     
T  785 ctctcctcttgggcctcctctcatcattcagtcgctgcttacccttgtcagcaggagtactatatggcttcggacgactctgttgtcccttacctctaca 686  T
Q  227 ctcactcatcaccttataatgag 249  Q
     |||||||||||||| |||||||    
T  685 ttcactcatcaccttgtaatgag 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 23962 - 23704
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   ||| || |||||||||||||||||||| ||||||||    
T  23962 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatacattactcttgtggcctttctcaccacactt 23863  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| |||||||||||||| | || |||||||| ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||    
T  23862 gtatcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttagga 23763  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||||| || ||||||||||| || | ||||||||| | ||||||||||| |||| ||||    
T  23762 cgactctgttgtcccttacccctcctctcactcataatcttataatgagttttggtgtc 23704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 12425 - 12201
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactat-ctcagcaggagca 125  Q
    |||||| ||||||| ||||||||||||||||| ||   | |||| ||||||||||||||||||||||||||||| || ||| || | || | |     ||    
T  12425 ttctgagcacacctaaagcacttcttctcatctttacgaaaaacattactcttgtggcctttctcgccacacttgaagcaatctctacttaccct---ca 12329  T
Q  126 tctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttc 225  Q
    |||||| | || ||||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||||| |||||||| |||| |||||| ||||| |    
T  12328 tctctcctcttgggcctactctcatcattcagtctctgcttacccttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctctac 12229  T
Q  226 gctcactcatcaccttataatgagcttt 253  Q
    | |||||||||||||| |||||| ||||    
T  12228 gatcactcatcaccttgtaatgatcttt 12201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 27 - 253
Target Start/End: Complemental strand, 20605 - 20381
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactat-ctcagcaggagca 125  Q
    |||||| ||||||| ||||||||||||||||| ||   | |||| ||||||||||||||||||||||||||||| || ||| || | || | |     ||    
T  20605 ttctgagcacacctaaagcacttcttctcatctttacgaaaaacattactcttgtggcctttctcgccacacttgaagcaatctctacttaccct---ca 20509  T
Q  126 tctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttc 225  Q
    |||||| | || ||||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||||| |||||||| |||| |||||| ||||| |    
T  20508 tctctcctcttgggcctactctcatcattcagtctctgcttacccttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctctac 20409  T
Q  226 gctcactcatcaccttataatgagcttt 253  Q
    | |||||||||||||| |||||| ||||    
T  20408 gatcactcatcaccttgtaatgatcttt 20381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 253
Target Start/End: Original strand, 2011 - 2236
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagca 125  Q
    ||||| |||||||| ||||||||||||||||| | ||| ||| || |||||||||||||||||||| |||||||| || ||||  || |||| |||||||    
T  2011 ttctgtccacacctaaagcacttcttctcatc-tcggtcacacacattactcttgtggcctttctcaccacacttgaagcaaataatttcagtaggagca 2109  T
Q  126 tctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttc 225  Q
    |||| | | || ||||||||||||||||| || |||||  |||| ||||||||||  |||||  |||| || |||||||| | || |||||||||||| |    
T  2110 tctcacctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcagaagcact-aacggtttcggacgactctactatcccttacctctgc 2208  T
Q  226 gctcactcatcaccttataatgagcttt 253  Q
    ||||||||||||| ||||||||||||||    
T  2209 gctcactcatcactttataatgagcttt 2236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 2896 - 3118
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||| |||||||||||   ||| |||||||| |||||||||||| ||||||||||||| ||   |||||| |||||||||||||||||||  ||||||||    
T  2896 gcttacaatcagctaatgtgtgtcccttctgtccacacctgaagaacttcttctcatctttatcacaaacattactcttgtggcctttcttaccacactt 2995  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
      | ||||| |||||| |||||||||||||| | || ||||||||||||||||| |  |||||  | || ||||||||||| ||||| ||||| ||||||    
T  2996 gtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattcaacctctgttttcctttgtcagcaggagcactatacggtttagga 3095  T
Q  201 cgactttgctgtcccttacctct 223  Q
     |||| |||||||  ||||||||    
T  3096 tgactctgctgtcatttacctct 3118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 63558 - 63377
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacact 99  Q
    |||| |||||||||||   ||| || ||||||||||||||||| |||||||||||||| | ||| |||||| ||||||||||||||||| || |||||||    
T  63558 gcttacaatcagctaaagtgtgtcctttctgaccacacctgaaacacttcttctcatc-tcggtcacaaacattactcttgtggcctttatcaccacact 63460  T
Q  100 taaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggg 182  Q
    | |||||||| || |||| ||||||||||||| | || ||||||||||||||||| | ||| ||| |||||||||||||||||    
T  63459 tgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaatctttgcttacccttgtcagcaggg 63377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 63372 - 63326
Alignment:
Q  207 tgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    |||||| |||| ||||| ||||||||||||||||| |||||||||||    
T  63372 tgctgtaccttgcctctacgctcactcatcaccttgtaatgagcttt 63326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 259
Target Start/End: Original strand, 11265 - 11500
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    ||||||||||||||||||||||||||| |||||||  |   |||| | || |||||||||||||| || ||||||||  ||||||| ||||||| |||||    
T  11265 cccttctgaccacacctgaagcacttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggag 11364  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    |||||||| | || || ||||| |||||||| |   ||||| | || ||||||||||| ||||| || |||||||||||| | ||||| |||||||| ||    
T  11365 catctctcctcttaggactcctatcatcattcaaaatctgctttcctttgtcagcaggagcactataaggcttaggacgaatctgctgacccttacccct 11464  T
Q  224 tcgctcactcatcaccttataatgagctttgatgtc 259  Q
     | ||||||||| | ||| |||||||||||| ||||    
T  11465 cctctcactcattatcttgtaatgagctttggtgtc 11500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 893 - 764
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||    ||| || |||||||||||||||||||||||||||||||| || |||||||| |||||||| |||||||||| |||||||||    
T  893 gcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttatggcctttcttgccacactt 794  T
Q  101 aaaacaaactatctcagcaggagcatctct 130  Q
      ||||||| ||||||||||||||||||||    
T  793 gtaacaaacaatctcagcaggagcatctct 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 253
Target Start/End: Complemental strand, 3920 - 3838
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||||||||| ||||| |||||||| |||||||| |||||||| || |  ||||| |||||||||||||| |||||||||||    
T  3920 ttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgctccttcgatcactcatcaccttgtaatgagcttt 3838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 259
Target Start/End: Complemental strand, 1305 - 1085
Alignment:
Q  39 ctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcg 138  Q
    |||||||||||| |||||||  |   |||||| || ||||||||||||||||| ||||||||  ||||||| ||||||||||||||||||||| | || |    
T  1305 ctgaagcacttcctctcatctctaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgg 1206  T
Q  139 gcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcac 238  Q
    | ||||| |||||||| |   ||||| | || ||||||||||| |||||||| |||||||||||| | | ||||||||| || || | ||||||||| |     
T  1205 gtctcctatcatcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattcttctgtccctttcccctcctctcactcattat 1106  T
Q  239 cttataatgagctttgatgtc 259  Q
    ||| |||||||||||| ||||    
T  1105 cttgtaatgagctttggtgtc 1085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 5867 - 6119
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||||||   ||| || ||||| ||||| ||||| |||||||||| |||      ||| || |||||||||||||||||||| ||||||||    
T  5867 gcttgcaatcagctaatgtgtgtcctttctgtccacatctgaaacacttcttcttatctcaatcacacacattactcttgtggcctttctcaccacactt 5966  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
     ||| | ||  |||||  ||| ||||||||| |  | ||||||||||||||||| ||  ||||  | || ||||||||||| ||||| ||||| || |||    
T  5967 gaaatagacagtctcattaggggcatctctcctcctaggcctcctctcatcattcagcatctgttttcctttgtcagcaggagcactatacggtttcgga 6066  T
Q  201 cgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  6067 cgactctgctgacccttacctctgcgctcactcatcactttataatgagcttt 6119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 43458 - 43211
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacact 99  Q
    |||| |||||||||||   ||| || ||||| |||||||| ||||||||||||||||| | | | ||| || |||||||||||||| || || | |||||    
T  43458 gcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatc-tcgatcacacacattactcttgtggcccttttcacgacact 43360  T
Q  100 taaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagg 199  Q
    | ||||| || ||||||  ||||||||||||| | || ||||||||||||||||| || |||||  |||| |||| || ||| ||||| ||| | || ||    
T  43359 tgaaacagacaatctcattaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgttagaaggagcactatacagttttgg 43260  T
Q  200 acgactttgctgtcccttacctcttcgctcactcatcaccttataatga 248  Q
    |||||| || |||||||||||||| ||||||||||||||||| ||||||    
T  43259 acgactctgttgtcccttacctctgcgctcactcatcaccttgtaatga 43211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 819 - 623
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    ||||| ||||||||||||||||||||| |||| || ||   |||||| || ||||||||||||||||| ||| ||||  ||||||| ||||||| |||||    
T  819 cccttttgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccaaacttgtaacaaacaatctcagaaggag 720  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 220  Q
    |||||||| | || |||||||| |||||||| |   ||||| | || ||||||  ||| |||||||| |||||||||||| | ||||||||||||||    
T  719 catctctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcaataggagcactgtaaggcttaggacgattctgctgtcccttacc 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 243
Target Start/End: Complemental strand, 775 - 657
Alignment:
Q  125 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 224  Q
    ||||||| | || ||||||||||||||||| |||||||   |||| ||||||||||| ||||||||||| || |||||||| |||||||||||||||||     
T  775 atctctcctcttaggcctcctctcatcattcagtctctatttacctttgtcagcaggagcactgtacggtttcggacgactctgctgtcccttacctcta 676  T
Q  225 cgctcactcatcaccttat 243  Q
    | |||||||||||||||||    
T  675 cactcactcatcaccttat 657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 259
Target Start/End: Complemental strand, 67124 - 66889
Alignment:
Q  24 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    ||||| |||||||||||||| || ||| ||||||   |   |||||| || |||||||||||||| || ||||||||| ||||||| ||||| | |||||    
T  67124 cccttttgaccacacctgaaacatttcctctcatgtctaccacaaacattgctcttgtggcctttttcaccacacttataacaaacaatctcggaaggag 67025  T
Q  124 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 223  Q
    |||||||| | || || ||||| |||||||| |   ||| | | || |||||| |||| |||||||| |||||||||||| | ||||||||||| || ||    
T  67024 catctctcctcttgggtctcctatcatcattcatcatctactttcctttgtcaacaggagcactgtaaggcttaggacgattctgctgtcccttgcccct 66925  T
Q  224 tcgctcactcatcaccttataatgagctttgatgtc 259  Q
     | ||||||||| | ||| |||||||||||| ||||    
T  66924 cctctcactcattatcttgtaatgagctttggtgtc 66889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 254
Target Start/End: Complemental strand, 16577 - 16395
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||| ||||| ||||||||  | ||||| | ||||||||||| |||| || |  | ||||||||||||||||| |  || ||| |||| |    
T  16577 ttactcttgtggcccttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattcaccctttgcttacctt 16478  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
    | |||||||| ||||| || ||||| |||||||| ||||| | |||||| || ||||||||||| ||||| ||||||||||||    
T  16477 tatcagcaggagcactataaggctttggacgactctgctgactcttacccctccgctcactcataaccttgtaatgagctttg 16395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 250
Target Start/End: Complemental strand, 57582 - 57404
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| |||||||||||||||||  || |  |||| |||||| ||||||||||| || |  | ||||||||||||||||| | ||| ||| ||||||    
T  57582 ttactcttatggcctttctcgccacaagtatagtaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgcttaccct 57483  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    | |||||||| |||||||| ||||| |||||||||||||| || || ||| | |||||| |||  ||||| ||||||||    
T  57482 tatcagcaggagcactgtaaggctttggacgactttgctgacctttgcctttccgctcattcacaaccttgtaatgagc 57404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 250
Target Start/End: Original strand, 7209 - 7387
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| ||||||||||| |||||  || | ||||| |||||| ||||||||||| || |  | ||||||||||||||||| | ||| ||| ||||||    
T  7209 ttactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgcttaccct 7308  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    | |||||||| |||||||| ||||| || ||||||||||| | ||| ||| | |||||| |||  ||||| ||||||||    
T  7309 tatcagcaggagcactgtaaggctttggtcgactttgctgactcttgcctttccgctcattcacaaccttgtaatgagc 7387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 250
Target Start/End: Original strand, 14339 - 14517
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| ||||||||||| |||||  || | ||||| |||||| ||||||||||| || |  | ||||||||||||||||| | ||| ||| ||||||    
T  14339 ttactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgcttaccct 14438  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    | |||||||| |||||||| ||||| || ||||||||||| | ||| ||| | |||||| |||  ||||| ||||||||    
T  14439 tatcagcaggagcactgtaaggctttggtcgactttgctgactcttgcctttccgctcattcacaaccttgtaatgagc 14517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 253
Target Start/End: Complemental strand, 30291 - 30113
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgt 174  Q
    |||||||||||||| || ||||||||| ||||||| |||||||||||||||||| || | || |||||||| |||||||| |   ||||  | || ||||    
T  30291 ctcttgtggcctttttcaccacacttataacaaacaatctcagcaggagcatctttcctcttgggcctcctgtcatcattcatcttctgtttccctttgt 30192  T
Q  175 cagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    ||||||| |||||||| || ||||||||| | || | ||||||||| || | ||||||||| | ||  |||||||||||    
T  30191 cagcaggagcactgtaaggtttaggacgattctgttatcccttacccctcctctcactcattatctagtaatgagcttt 30113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 254
Target Start/End: Original strand, 18181 - 18363
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| ||||||||||| |||||  |  | ||||| |||||||||| ||||||| || |  | ||||||||||||||||||| ||| ||| ||||||    
T  18181 ttactcttatggcctttctcaccacaagtgtagcaaacaatctcagcagtagcatctttctttcttggcctcctctcatcattaactctttgcttaccct 18280  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
    | |||||||| ||| |||| ||||| |||||||||| ||| || |||||| | | |||| |||   |||| ||||||||||||    
T  18281 tatcagcaggagcattgtaaggctttggacgacttttctgacctttacctttcctctcattcacagccttgtaatgagctttg 18363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 254
Target Start/End: Complemental strand, 3860 - 3678
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    ||||||||||||||  |||||||||||||  | ||||| |||||| ||| | |||||||| | || || |||||||||||||| | ||| ||  | ||||    
T  3860 ttactcttgtggcccctctcgccacacttgtagcaaacaatctcaacagaaacatctctcctcttaggtctcctctcatcattcaatctttgtttcccct 3761  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcc-ct-tacctcttcgctcactcatcaccttataatgagctttg 254  Q
    |||||||||| ||||| || ||||||||||||| |||||| || || | ||||||  ||||||||| ||||||||||| ||||||    
T  3760 tgtcagcaggagcactatagggcttaggacgaccttgctggcctctgttcctctt--ctcactcataaccttataatgtgctttg 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 7754 - 7696
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 123  Q
    |||||| |||||||||||||||||| ||||||| || |||||||| || || |||||||    
T  7754 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggag 7696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 259
Target Start/End: Original strand, 251961 - 252142
Alignment:
Q  78 ttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcag 177  Q
    ||||||||||| || |||||||| ||||| || |||||| || ||||||||||| | || |||||||| |||||||| |   | ||  | ||  || |||    
T  251961 ttgtggcctttttcaccacacttgaaacacacaatctcaacaagagcatctctcctcttgggcctcctatcatcattcatcttatgttttcctgtggcag 252060  T
Q  178 caggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    |||| |||||||| || ||||||||| | || ||||||||||| || | ||||||||||||||| |||||||||||| ||||    
T  252061 caggagcactgtaaggtttaggacgattatgttgtcccttacccctcctctcactcatcaccttgtaatgagctttggtgtc 252142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 211
Target Start/End: Complemental strand, 229827 - 229681
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| || ||||||||||||||||| ||||| || |||||||| ||||| |||||||||||  || |||| |||| ||| |||||    | ||||||     
T  229827 acaaacattgctcttgtggcctttctcaccacaattgaaacaaacaatctccgcaggagcatccttcttattaggccgcctatcatcgaccattctctgt 229728  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
     | ||||| |||||||||||||| || |||||||| ||||| |||||    
T  229727 ttgcccttatcagcaggggcactatagggcttagggcgactctgctg 229681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 12062 - 12161
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||    
T  12062 gcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacactt 12161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 254
Target Start/End: Original strand, 2326 - 2517
Alignment:
Q  63 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 162  Q
    |||||| ||||||||||||| |||||||| |||||    |||||||  |||||||||||   |||| || | || || |||||||||||||| |  ||||    
T  2326 gtacaagcgttactcttgtgacctttctctccacataggaaacaaagaatctcagcaggtatatctttcttcttgggtctcctctcatcattcaccctct 2425  T
Q  163 gcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 254  Q
    || ||||||| ||||| || |||||||| |||||||||||||| | ||    |||||| || |||||| |||| | ||||||||||||||||    
T  2426 gcttacccttatcagccggagcactgtaaggcttaggacgactctactagttcttacccctccgctcattcatgatcttataatgagctttg 2517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 63 - 253
Target Start/End: Original strand, 26679 - 26869
Alignment:
Q  63 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 162  Q
    |||||| | |||||||||||||||||||| |||||  || | ||||| | |||||||| || |||| || |  | ||||||||||||||||| | ||| |    
T  26679 gtacaagcattactcttgtggcctttctcaccacaagtatagcaaacaacctcagcagtagtatctttctttctaggcctcctctcatcattcactcttt 26778  T
Q  163 gcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 253  Q
    || |||||||  ||||||| |||||||| ||||| |||||| ||| ||| | ||||||| ||| ||||  ||  ||||| |||||||||||    
T  26779 gcttacccttaccagcaggagcactgtaaggctttggacgaatttactgactcttaccttttctctcatgcacaaccttgtaatgagcttt 26869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 36785 - 36733
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    ||||| ||||||||||||||||| |||||||| || |||||||||||||||||    
T  36785 ctcttatggcctttctcgccacaattaaaacagacaatctcagcaggagcatc 36733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 36763 - 36980
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    |||||||||||||||||   ||||||||||  ||||||| ||| || |||||| | ||||  | |||||| || ||||||||||||||||| ||||| ||    
T  36763 gcttgcaatcagctaacgtatgacccttcttgccacaccggaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccacaatt 36862  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
     ||||| || ||||| |||||||||||  || | || |||| ||| |||||    | ||||||  | ||||| |||||||||||||| || ||||||||     
T  36863 gaaacagacgatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctgtttgcccttatcagcaggggcactatagggcttaggg 36962  T
Q  201 cgactttgctgtccctta 218  Q
     |||| ||||| ||||||    
T  36963 agactctgctggccctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 13923 - 13835
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||||||||||| |||||||| |||||||||||| | |||||||||||||| || | ||||||||| | ||| |||||||||||| ||||    
T  13923 ttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttttaatgagctttggtgtc 13835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 17686 - 17762
Alignment:
Q  183 gcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    |||||||| |||||||||||||| |||||||||||||| || | ||||||||| | |||||||||||||||| ||||    
T  17686 gcactgtaaggcttaggacgactctgctgtcccttacccctcctctcactcattatcttataatgagctttggtgtc 17762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1274 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 20 - 93
Alignment:
Q  138 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    ||||||||||||||||| | ||| ||| ||||||| |||||||| |||||||| ||||| ||||||||||||||    
T  20 ggcctcctctcatcattcaatctttgcttacccttatcagcaggagcactgtaaggctttggacgactttgctg 93  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 5107 - 4982
Alignment:
Q  78 ttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcag 177  Q
    ||||||||||| ||  ||| |||  ||||||| || |||||||||||||||||| | || |||||||| |||||||| |  |||||| | || |||||||    
T  5107 ttgtggcctttttcatcactcttttaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgcttccctttgtcag 5008  T
Q  178 caggggcactgtacggcttaggacga 203  Q
    |||| |||||||| || |||||||||    
T  5007 caggagcactgtaaggtttaggacga 4982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 30345 - 30433
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 259  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||||| || || | |||||||||   ||| |||||||||||| ||||    
T  30345 ttgtcagcaggagcactgtaaggcttaggacgactctgctgtcccttgcccctcctctcactcattgtcttgtaatgagctttggtgtc 30433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 30225 - 30331
Alignment:
Q  27 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||| |||||| |||||||  |   ||||||||| || |||||||||||||| ||||||||  ||||||| |||| || | ||||||    
T  30225 ttctgaccacacctgaatcacttcctctcatctctaccacaaacgttgcttttgtggcctttctcaccacacttgtaacaaacaatcttagaaagagcat 30324  T
Q  127 ctctcat 133  Q
    | |||||    
T  30325 cactcat 30331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 32218 - 32270
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    ||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  32218 ctcttgtggcctttctcgccacaattaaaacagacaatctcagcaggagcatc 32270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 217
Target Start/End: Complemental strand, 10214 - 10062
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| |||||||||||||||||| ||||| | || |||||||| || || |||||||||||  || | || |||| ||| |||||    | |||||||    
T  10214 acaaacattactcttgtggcctttcccgccatagttgaaacaaacaatatccgcaggagcatccttcttctttggccgcctatcatcgaccattctctgc 10115  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
     | ||||| |||||| ||||||| || || ||||| ||||| ||||| |||||    
T  10114 ttgcccttatcagcaagggcactataaggtttagggcgactctgctgaccctt 10062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 217
Target Start/End: Complemental strand, 12869 - 12717
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| |||||||||||||||||| ||||| | || |||||||| || || |||||||||||  || | || |||| ||| |||||    | |||||||    
T  12869 acaaacattactcttgtggcctttcccgccatagttgaaacaaacaatatccgcaggagcatccttcttctttggccgcctatcatcgaccattctctgc 12770  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
     | ||||| |||||| ||||||| || || ||||| ||||| ||||| |||||    
T  12769 ttgcccttatcagcaagggcactataaggtttagggcgactctgctgaccctt 12717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 253
Target Start/End: Original strand, 468 - 583
Alignment:
Q  138 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatca 237  Q
    ||||||||||||||||| | ||| ||  ||||||| |||||||| || ||||| ||||| || ||||||||||| ||||||||| | | ||||||||       
T  468 ggcctcctctcatcattcactctttgtttacccttatcagcaggagcgctgtaaggctttgggcgactttgctgacccttacctttcctctcactcacag 567  T
Q  238 ccttataatgagcttt 253  Q
    |||| |||||||||||    
T  568 ccttgtaatgagcttt 583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 7908 - 8071
Alignment:
Q  87 ttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcac 186  Q
    ||||| ||||||||  ||||||| ||||||| |||| |||| ||  | || || |||||||||||||| | |||||||   || |||||| |||| ||||    
T  7908 ttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgctctcctttgtcaacaggagcac 8007  T
Q  187 tgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    |||| ||||| ||||||| |||||| |||||    || ||||||||| | ||||||||||||||    
T  8008 tgtagggcttcggacgaccttgctgacccttgttcctccgctcactcctaaccttataatgagc 8071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 1269 - 1367
Alignment:
Q  66 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    ||||| |||||||||||||| ||||| ||||||||  ||||||| ||||||| |||| |||| ||  | || || |||||||||||||| | |||||||    
T  1269 caaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgc 1367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 1832 - 1693
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| |||||||||||||||||   | | || || ||||||  |||||||||| || |  | ||||||||||||||||||| ||| ||  | ||||    
T  1832 ttactcttatggcctttctcgccacaagcatagcacacaatctcattaggagcatctttctttctaggcctcctctcatcattaactctttgttttccct 1733  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||||||| |||||||| ||||| |||||||| |||||    
T  1732 tatcagcaggagcactgtaaggctttggacgactctgctg 1693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 10803 - 10846
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  10803 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 10846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 4696 - 4557
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| |||||||||||||||||   | | || || ||||||  |||||||||| || |  | ||||||||||||||||||| ||| ||  | ||||    
T  4696 ttactcttatggcctttctcgccacaagcatagcacacaatctcattaggagcatctttctttctaggcctcctctcatcattaactctttgttttccct 4597  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||||||| |||||||| ||||| |||||||| |||||    
T  4596 tatcagcaggagcactgtaaggctttggacgactctgctg 4557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 48066 - 48205
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||||||||| |||||  || | || || |||||| ||||||||||| || |  | || | ||||||||||   | ||||||  ||||||    
T  48066 ttactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttctagggcgcctctcatcaaccattctctgtttaccct 48165  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||||||| |||||||| |||||||||||||| |||||    
T  48166 tatcagcaggagcactgtaaggcttaggacgactctgctg 48205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 55439 - 55300
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||||||||| |||||  || | || || |||||| ||||||||||| || |  | || | ||||||||||   | ||||||  ||||||    
T  55439 ttactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttctagggcgcctctcatcaaccattctctgtttaccct 55340  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||||||| |||||||| | |||||||||||| |||||    
T  55339 tatcagcaggagcactgtaagtcttaggacgactctgctg 55300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 23266 - 23127
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| ||||||||||| ||| |  || ||||||| | |||||||| ||  ||| || |  | ||||| ||||||||||| | ||||||  ||||||    
T  23266 ttactcttatggcctttctcaccaaaagtataacaaacaacctcagcagtagtctctttctttctaggccttctctcatcattcaatctctgtttaccct 23167  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||||||| |||||||| |||||||||||| |||||||    
T  23166 tatcagcaggagcactgtaaggcttaggacgattttgctg 23127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 199
Target Start/End: Complemental strand, 9328 - 9192
Alignment:
Q  63 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 162  Q
    |||||| | |||||||||||||| ||||| |||||  || | ||||| ||||||| || || |||| || |  | ||||||||||||||||| | ||| |    
T  9328 gtacaagcattactcttgtggcccttctcaccacaagtatagcaaacaatctcagtagtagtatctttctttctaggcctcctctcatcattcaatcttt 9229  T
Q  163 gcctacccttgtcagcaggggcactgtacggcttagg 199  Q
    |  ||||||| |||||||| ||||| || ||||||||    
T  9228 gtttacccttatcagcaggagcactataaggcttagg 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 104562 - 104701
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||||||||| |||||  || | ||||| |||||| ||||||||||| || |  | |||| |||||||||| | | ||||||  | ||||    
T  104562 ttactcttgtggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggccgcctctcatcaatcattctctgttttccct 104661  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||||||| ||||| || ||||| |||||||| |||||    
T  104662 tatcagcaggagcactataaggctttggacgactctgctg 104701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 250
Target Start/End: Complemental strand, 216388 - 216210
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| ||||||||||| |||||  |  | ||||| |||||||||  | ||||| || |  | |||||||| | |||||| | ||| ||| ||||||    
T  216388 ttactcttatggcctttctcaccacaagtgtagcaaacaatctcagcaacatcatctttctttctaggcctccttttatcattcaatctttgcttaccct 216289  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 250  Q
    | |||||||| |||||||| ||||| |||||||||||||| ||||| ||| | | |||| |||  ||||| ||||||||    
T  216288 tatcagcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaaccttgtaatgagc 216210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 17489 - 17642
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| |||||||||||||||||||| ||||| || ||||| || ||||| |||||||||||  || | || |||| ||| |||||    | ||| ||     
T  17489 acaaacattactcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctatgt 17588  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 218  Q
     | ||||| |||||||||||||| || |||||||| ||||| ||||| ||||||    
T  17589 ttgcccttatcagcaggggcactatagggcttagggcgactctgctggccctta 17642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 3859 - 3902
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  3859 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 3902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 209
Target Start/End: Original strand, 18935 - 19123
Alignment:
Q  21 tgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcag 120  Q
    |||||||||| |||||| |  || ||| ||||| |||||  || |||| | |||||||||||||||||||| |||||  || | || || || ||| |||    
T  18935 tgacccttcttaccacagcgaaaacacctcttcacatccccgggacaagcattactcttgtggcctttctcaccacaagtatagcagacaatttcaacag 19034  T
Q  121 gagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgc 209  Q
    |||| ||| || | || || | ||| ||||||   | ||||||  ||||||| |||||||| |||||||| ||||||||||||||||||    
T  19035 gagcttctttctttttggggcgcctatcatcaaccattctctgtttacccttatcagcaggagcactgtaaggcttaggacgactttgc 19123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 260
Target Start/End: Original strand, 117 - 312
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| || ||||||||||||||||| ||||| || ||||| || ||||| |||||||||||  || | || |||| ||| |||||    | ||||||     
T  117 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctctgcaggagcatccttcttcttaggccgcctatcatcgaccattctctgt 216  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt-cgctcactcatcaccttataatgagctttgatgtcc 260  Q
     | ||||| |||||||||||||| || |||||||| ||||| ||| | ||||||  |||| |||||| |||  ||||| |||||||||||| |||||    
T  217 tttcccttatcagcaggggcactatagggcttagggcgactctgccggccctta-gtcttccgctcattcacaaccttgtaatgagctttggtgtcc 312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 217
Target Start/End: Original strand, 5327 - 5479
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| |||||||| ||||| ||||||||||| || |||||||| ||||| |||||||||||  || | || |||| ||| |||||    | ||||||     
T  5327 acaaacattactcttatggcccttctcgccacagttgaaacaaacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctgt 5426  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
     | ||||| |||||| ||||||| || |||||||| ||||| ||||| |||||    
T  5427 ttgcccttatcagcaagggcactataaggcttagggcgactctgctggccctt 5479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 379 - 431
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||| ||||    
T  379 ctcttgtggcctttctcaccacaattaaaacaaacaatctcagcaggaacatc 431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 453 - 504
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 126  Q
    ||||||||||||||||| ||||| |||||||| || ||||||||||||||||    
T  453 ctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcat 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 21944 - 21995
Alignment:
Q  76 tcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  21944 tcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 21995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 37368 - 37419
Alignment:
Q  76 tcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  37368 tcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 37419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 11891 - 11930
Alignment:
Q  178 caggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  11891 caggggcactgtacggcttaggacgactctgctgtccctt 11930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 21419 - 21458
Alignment:
Q  178 caggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  21419 caggggcactgtacggcttaggacgactctgctgtccctt 21458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 55439 - 55479
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtcc 214  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  55439 tcagcaggggcactgtacggcttaggacgactctgttgtcc 55479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 455 - 393
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||| || ||||||||||||||||||||||| || |||||||| ||||| | |||||||||    
T  455 acaaacattgctcttgtggcctttctcgccacaattgaaacaaacaatctccgtaggagcatc 393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 208 - 270
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||| |||||||||||||||||| ||||||| || |||||||| || || |||||||||||    
T  208 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 11428 - 11542
Alignment:
Q  136 tcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcat 235  Q
    |||| |||||||||||||||| ||  ||  | ||||| |||||||||||||| || ||||| |||||||||||||| ||||| ||| | | |||| |||     
T  11428 tcggtctcctctcatcattaactcgttgtttgcccttatcagcaggggcactataaggcttgggacgactttgctgacccttgcctttcctctcattcac 11527  T
Q  236 caccttataatgagc 250  Q
     ||||| ||||||||    
T  11528 aaccttgtaatgagc 11542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 205
Target Start/End: Original strand, 263 - 393
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgt 174  Q
    ||||||||||||||||| ||||| ||||| || || |||||||||||| ||||  || | || ||||  || || ||    | ||||||  | ||||| |    
T  263 ctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatccttcttcttaggccgtctatcctcgaccattctctgtttgcccttat 362  T
Q  175 cagcaggggcactgtacggcttaggacgact 205  Q
    |||||||||||||||||||||||||||||||    
T  363 cagcaggggcactgtacggcttaggacgact 393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 14007 - 13945
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||| || ||||||||||||||||| ||||| |||||||| || ||||| |||||||||||    
T  14007 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgcaggagcatc 13945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 13099 - 13037
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||| |||||||||||||||||| ||||||| || |||||||| || || |||||||||||    
T  13099 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 13037  T

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Target: scaffold0055 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 22679 - 22721
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtc 213  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  22679 ttgtcagcgggggcactgtacggcttaggacgactctgctgtc 22721  T

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Target: scaffold0052 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 7668 - 7710
Alignment:
Q  171 ttgtcagcaggggcactgtacggcttaggacgactttgctgtc 213  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  7668 ttgtcagcgggggcactgtacggcttaggacgactctgctgtc 7710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 1 - 218
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||||||    ||||||||||  ||||||| ||| || |||||| | ||||| | |||||| || || |||||||||||||| |||||  |    
T  1 gcttgcaatcagctaaagtatgacccttcttgccacaccggaaacatttcttcacctcctttggacaaacattgcttttgtggcctttctcaccacaaat 100  T
Q  101 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 200  Q
     ||||| || ||||| ||| |||||||  || | || |||| ||| |||||   ||  ||||   | ||||| |||||||||||||| || ||||||||     
T  101 gaaacagacaatctccgcaagagcatccttcttcttaggccgcctatcatcgacaatactctatttgcccttatcagcaggggcactatagggcttaggg 200  T
Q  201 cgactttgctgtccctta 218  Q
    ||||| ||||| ||||||    
T  201 cgactctgctggccctta 218  T

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Target: scaffold0993 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 1318 - 1451
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||||||||| |||||  || ||||||| |||||| ||||||| ||  || |  |||| | ||| ||||||   | ||||||  ||||||    
T  1318 ttactcttgtggcctttctcaccacaagtataacaaacaatctcaacaggagcttccatctttctcgggcgcctatcatcaaccattctctgtttaccct 1417  T
Q  172 tgtcagcaggggcactgtacggcttaggacgact 205  Q
    | |||||||| |||||||| |||||||| |||||    
T  1418 tatcagcaggagcactgtaaggcttagggcgact 1451  T

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Target: scaffold0331 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 14881 - 14808
Alignment:
Q  138 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    ||||| || |||||||||| ||| | | ||||||| |||||||| |||||||| |||||||||||| |||||||    
T  14881 ggccttctttcatcattaaatcttttcttacccttatcagcaggagcactgtaaggcttaggacgattttgctg 14808  T

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Target: scaffold0293 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 209
Target Start/End: Original strand, 15746 - 15883
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||| ||||||||||| |||||  |  | ||||| |||||||||  | ||||| || |  | |||| |||||||||||||| ||| ||  | ||||    
T  15746 ttactcttatggcctttctcaccacaagtgtagcaaacaatctcagcaacaacatctttcttgctgggccgcctctcatcattaactctttgtttgccct 15845  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgc 209  Q
    | |||||||| |||||||| ||||| ||||||||||||    
T  15846 tatcagcaggagcactgtaaggctttggacgactttgc 15883  T

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Target: scaffold0181 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 28967 - 28862
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||| ||||||||   |||||||||||  ||||||| ||| || |||||  | ||||| | |||||| || ||||||||||||||||||||||| ||    
T  28967 gcttgcattcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctccttaggacaaacattgctcttgtggcctttctcgccacaatt 28868  T
Q  101 aaaaca 106  Q
     |||||    
T  28867 gaaaca 28862  T

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Target: scaffold0177 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 218
Target Start/End: Complemental strand, 15016 - 14863
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 164  Q
    |||||| || ||||||||||||||||| ||||| |||||||| || ||||| | |||||||||  || | || |||  ||| |||||    | ||||||     
T  15016 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgtaggagcatccttcttcttaggctgcctatcatcgaccattctctgt 14917  T
Q  165 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 218  Q
     | ||||| |||||||||||||| || |||||||| ||||| ||||| ||||||    
T  14916 ttgcccttatcagcaggggcactatagggcttagggcgactctgctggccctta 14863  T

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Target: scaffold0177; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 11331 - 11269
Alignment:
Q  65 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||| || ||||||||||||||||| ||||| |||||||| || ||||| | |||||||||    
T  11331 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgtaggagcatc 11269  T

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Target: scaffold0605 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1545 - 1629
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcc 85  Q
    ||||||| ||||| ||||| ||||| |||||||| || ||||| || ||||||||||| | ||| ||| | ||||||||||||||    
T  1545 gcttgcattcagccaacaaatgaccattctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcc 1629  T

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Target: scaffold0297 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 7622 - 7486
Alignment:
Q  75 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgt 174  Q
    ||||||||||||||||| ||||| ||||| || || |||||||||||| ||||  || | || |||| ||| || ||    | ||||||  | ||||| |    
T  7622 ctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatccttcttcttaggccgcctatcttcgaccattctctgtttgcccttat 7523  T
Q  175 cagcaggggcactgtacggcttaggacgactttgctg 211  Q
    |||||||||||||||| |||||||| ||||| |||||    
T  7522 cagcaggggcactgtaaggcttagggcgactctgctg 7486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 346 - 291
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||||||||||||||||| |||||  ||||||| || ||||| |||||||||||    
T  346 ttactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatc 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 353 - 492
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||||||||| |||||  || | || || |||||  || |||||||| || | || |||| ||| ||||||   | |||| |  ||||||    
T  353 ttactcttgtggcctttctcaccacaagtatagcagacaatctccacaagagcatctttcttcttaggccacctatcatcaaccattctcggtttaccct 452  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||||||| |||||||| |||||||||||||| |||||    
T  453 tatcagcaggagcactgtaaggcttaggacgactctgctg 492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 4770 - 4909
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    |||||||||||||||||||| |||||  || | || || |||||  || |||||||| || | || |||| ||| ||||||   | |||| |  ||||||    
T  4770 ttactcttgtggcctttctcaccacaagtatagcagacaatctccacaagagcatctttcttcttaggccacctatcatcaaccattctcggtttaccct 4869  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||||||| |||||||| |||||||||||||| |||||    
T  4870 tatcagcaggagcactgtaaggcttaggacgactctgctg 4909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 9411 - 9356
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||||||||||||||||| |||||  ||||||| || ||||| |||||||||||    
T  9411 ttactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatc 9356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 13376 - 13297
Alignment:
Q  138 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    ||||||||||||||||| | ||| ||| ||||||| |||||||| |||||| | | ||| |||| ||||||||| |||||    
T  13376 ggcctcctctcatcattcaatctttgcttacccttatcagcaggagcactgcaagactttggacaactttgctgaccctt 13297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 4523 - 4384
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 171  Q
    ||||||||||||||||| || |||||  || | || || |||||  ||||||||||| || | || |||| ||| ||||||   | ||||||  || |||    
T  4523 ttactcttgtggcctttttcaccacaagtatagcagacaatctccacaggagcatctttcttcttaggccgcctatcatcaaccattctctgtttatcct 4424  T
Q  172 tgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    | |||||||| |||||||| |||||||||||||| |||||    
T  4423 tatcagcaggagcactgtaaggcttaggacgactctgctg 4384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 213
Target Start/End: Original strand, 12322 - 12421
Alignment:
Q  114 tcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtc 213  Q
    |||| ||||||||||||| | |  ||||||||||||||||| || |||||  || | ||||||||||| ||||| ||||  || |||||||| |||||||    
T  12322 tcagtaggagcatctctcctctaaggcctcctctcatcattcagcctctgtttatctttgtcagcaggagcactatacgatttcggacgactctgctgtc 12421  T

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Target: scaffold0120 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 14420 - 14475
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 127  Q
    |||||||| |||||||||||||||||  ||||||| || ||||| |||||||||||    
T  14420 ttactcttatggcctttctcgccacaagtaaaacagacaatctctgcaggagcatc 14475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15618 - 15492
Alignment:
Q  1 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 100  Q
    ||||||||||||||||    ||||||||||  ||||||| ||| ||||||||  | ||||  | |||||  || ||||||||||||||||| ||||| ||    
T  15618 gcttgcaatcagctaatgtatgacccttcttgccacaccggaaacacttctttgcctcctctggacaaaaattgctcttgtggcctttctcaccacaatt 15519  T
Q  101 aaaacaaactatctcagcaggagcatc 127  Q
     ||||| |  ||||| |||||||||||    
T  15518 gaaacagatgatctccgcaggagcatc 15492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 30981 - 30923
Alignment:
Q  72 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctct 130  Q
    |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| |||||||    
T  30981 ttactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctct 30923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 40436 - 40342
Alignment:
Q  111 atctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgact 205  Q
    |||||||||||||||||| || |  |||| | ||| ||||||   | ||||||  | ||||| ||||||||||||||||| ||||||||||||||    
T  40436 atctcagcaggagcatctttctttctcgggcgcctatcatcaaccactctctgttttcccttatcagcaggggcactgtaaggcttaggacgact 40342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 254
Target Start/End: Complemental strand, 850 - 821
Alignment:
Q  225 cgctcactcatcaccttataatgagctttg 254  Q
    ||||||||||||||||||||||||||||||    
T  850 cgctcactcatcaccttataatgagctttg 821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 3929 - 4026
Alignment:
Q  114 tcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctg 211  Q
    ||||||||||||||| || | || |||| ||| ||||||   | ||||||  ||||||| |||||||| |||||||| | |||||||||||| |||||    
T  3929 tcagcaggagcatctttcttcttaggccgcctatcatcaaccattctctgtttacccttatcagcaggagcactgtaagacttaggacgactctgctg 4026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 8699 - 8736
Alignment:
Q  180 ggggcactgtacggcttaggacgactttgctgtccctt 217  Q
    |||||||||||||||||||||||||| || ||||||||    
T  8699 ggggcactgtacggcttaggacgactctgatgtccctt 8736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 30725 - 30766
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccc 215  Q
    ||||||||||||||||||||||||||| |||| || ||||||    
T  30725 tcagcaggggcactgtacggcttaggatgactctgttgtccc 30766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 254
Target Start/End: Original strand, 25949 - 25978
Alignment:
Q  225 cgctcactcatcaccttataatgagctttg 254  Q
    ||||||||||||||||||||||||||||||    
T  25949 cgctcactcatcaccttataatgagctttg 25978  T

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Target: scaffold0357 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 17851 - 17807
Alignment:
Q  166 tacccttgtcagcaggggcactgtacggcttaggacgactttgct 210  Q
    ||||||| |||||||| |||||||| |||||||||||||| ||||    
T  17851 tacccttatcagcaggagcactgtaaggcttaggacgactctgct 17807  T

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Target: scaffold0342 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 250
Target Start/End: Complemental strand, 14167 - 14055
Alignment:
Q  138 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatca 237  Q
    |||||| |||||||||| | ||| ||  | ||||| ||| |||| |||||||| ||||| |||||||||||||| ||||| ||| | | |||| |||  |    
T  14167 ggcctcttctcatcatttattctttgttttcccttatcatcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaa 14068  T
Q  238 ccttataatgagc 250  Q
    |||| ||||||||    
T  14067 ccttgtaatgagc 14055  T

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Target: scaffold0319 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 6938 - 6982
Alignment:
Q  174 tcagcaggggcactgtacggcttaggacgactttgctgtccctta 218  Q
    ||||||||||||||||| |||||||| ||||| ||||| ||||||    
T  6938 tcagcaggggcactgtaaggcttagggcgactctgctgaccctta 6982  T

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Target: scaffold0305 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 3131 - 3255
Alignment:
Q  3 ttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaa 102  Q
    ||||||||||||||   |||||||||||  ||||||| ||| ||||||| | | ||||  | |||| |  ||||||||||||||||||| ||||| || |    
T  3131 ttgcaatcagctaatgtgtgacccttcttgccacaccggaaacacttctccacctcctcaggacaagcagtactcttgtggcctttctcaccacaattga 3230  T
Q  103 aacaaactatctcagcaggagcatc 127  Q
    || ||   |||||||||||| ||||    
T  3231 aagaagtaatctcagcaggaacatc 3255  T

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