View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1022_high_2 (Length: 300)
Name: NF1022_high_2
Description: NF1022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1022_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 154 - 248
Target Start/End: Original strand, 30645106 - 30645200
Alignment:
| Q |
154 |
ttacctcccaacaccaaagacatgaatcagaatgatcttccaaaatatcagcatcagcattgggaactccgtacatcatcctttgcccaacaaac |
248 |
Q |
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| T |
30645106 |
ttacctcccaacaccaaagacatgaatcagaatgatcttccaaaatatcagcatcagcattgggaactccgtacatcatcctttgcccaacaaac |
30645200 |
T |
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Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 30644963 - 30645027
Alignment:
| Q |
11 |
cacagacccaattattatcaacatccaaaaaactttgatttacacagatttaagataacccggtt |
75 |
Q |
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| T |
30644963 |
cacagacccaattattatcaacatccaaaaaacattgatttacacagatttaagataacccggtt |
30645027 |
T |
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