View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1022_low_1 (Length: 510)
Name: NF1022_low_1
Description: NF1022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1022_low_1 |
 |  |
|
| [»] scaffold0498 (1 HSPs) |
 |  |
|
| [»] chr7 (6 HSPs) |
 |  |
|
| [»] chr4 (9 HSPs) |
 |  |
|
| [»] chr3 (8 HSPs) |
 |  |
|
| [»] chr8 (4 HSPs) |
 |  |
|
| [»] chr2 (8 HSPs) |
 |  |
|
| [»] scaffold0005 (1 HSPs) |
 |  |
|
| [»] chr6 (5 HSPs) |
 |  |
|
| [»] scaffold0281 (1 HSPs) |
 |  |
|
| [»] scaffold0103 (1 HSPs) |
 |  |
|
| [»] scaffold0024 (2 HSPs) |
 |  |  |
|
| [»] scaffold0043 (1 HSPs) |
 |  |
|
| [»] scaffold0048 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold0498 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0498
Description:
Target: scaffold0498; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 400 - 510
Target Start/End: Original strand, 11875 - 11985
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaataa |
499 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11875 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacgtcttataataacatataagcatcaacaacatttaagaatatcaagtagacattaataa |
11974 |
T |
 |
| Q |
500 |
aatacaaatca |
510 |
Q |
| |
|
||||||||||| |
|
|
| T |
11975 |
aatacaaatca |
11985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 103; Significance: 5e-51; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 400 - 510
Target Start/End: Complemental strand, 11510100 - 11509990
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaataa |
499 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11510100 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagcatcaataacatttaagaatatcaagtagacattaataa |
11510001 |
T |
 |
| Q |
500 |
aatacaaatca |
510 |
Q |
| |
|
||||||||||| |
|
|
| T |
11510000 |
aatacaaatca |
11509990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 400 - 510
Target Start/End: Complemental strand, 18149089 - 18148978
Alignment:
| Q |
400 |
taaaatttcatttaataaaaa-tcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaata |
498 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18149089 |
taaaatttcatttaataaaaaatcaaataggcatcaattatcatcttataataacatataagcatcaacaacatttaagaatatcaagtagacattaata |
18148990 |
T |
 |
| Q |
499 |
aaatacaaatca |
510 |
Q |
| |
|
|||||||||||| |
|
|
| T |
18148989 |
aaatacaaatca |
18148978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 34705525 - 34705601
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaa |
476 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
34705525 |
taaaatttcatttagtaaaaatcaaataggcgtcaatcaacatcttgtaataacatataagtatcaacaacatttaa |
34705601 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 447 - 510
Target Start/End: Complemental strand, 22530428 - 22530365
Alignment:
| Q |
447 |
taataacatataagaatcaacaacatttaagaatatcaagtagacattaataaaatacaaatca |
510 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22530428 |
taataacttataagaatcaacaacatttaagaatatcaagtagacattaataaaatacaaatca |
22530365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 327 - 404
Target Start/End: Complemental strand, 22535425 - 22535348
Alignment:
| Q |
327 |
attgaaagcttacaaatgggtgtgggaaagtcatatcacatccaagattgcagtgttttcttggcgtttgctttaaaa |
404 |
Q |
| |
|
|||||||||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22535425 |
attgaaagcttacaaaagggtgtgggaaaatcttatcccatccaagattgcagtgttttcttggcgtttgcttcaaaa |
22535348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 424 - 490
Target Start/End: Complemental strand, 21860872 - 21860806
Alignment:
| Q |
424 |
aataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtaga |
490 |
Q |
| |
|
|||||||| ||||||||||||||| || |||| ||| |||||||||||||| |||||||||||||| |
|
|
| T |
21860872 |
aataggcaccaatcaacatcttatgatgacatgtaaacatcaacaacatttacgaatatcaagtaga |
21860806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 103; Significance: 5e-51; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 400 - 510
Target Start/End: Original strand, 15703289 - 15703399
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaataa |
499 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15703289 |
taaaatttcatttaataaaaatcaaataggtatcaatcaacatcttataataacatataagcatcaacaacatttaagaatatcaagtagacattaataa |
15703388 |
T |
 |
| Q |
500 |
aatacaaatca |
510 |
Q |
| |
|
||||||||||| |
|
|
| T |
15703389 |
aatacaaatca |
15703399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 400 - 501
Target Start/End: Original strand, 23972692 - 23972793
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaataa |
499 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23972692 |
taaaatttcatttaataaaaatcaaataggtatcaatcaacatctcataataacatataagcatcaacaacatttaagaatatcaagtagacattaataa |
23972791 |
T |
 |
| Q |
500 |
aa |
501 |
Q |
| |
|
|| |
|
|
| T |
23972792 |
aa |
23972793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 400 - 510
Target Start/End: Original strand, 14644470 - 14644581
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacatt-aata |
498 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | |
|
|
| T |
14644470 |
taaaatttcatttaaaaaaaatcaaatagacatcaatcaacatcttataataacatataagcatcaacaacatttaagaatatcaagtagacattaaaaa |
14644569 |
T |
 |
| Q |
499 |
aaatacaaatca |
510 |
Q |
| |
|
|||||||||||| |
|
|
| T |
14644570 |
aaatacaaatca |
14644581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 400 - 510
Target Start/End: Original strand, 11150174 - 11150284
Alignment:
| Q |
400 |
taaaatttcatttaataaaa-atcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaata |
498 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| ||| | |
|
|
| T |
11150174 |
taaaatttcatttaataaaacatcaaataggcatcaatcaacatctattaataacatatacga-tcaacaacatttaagaatatcaagtagacgctaaga |
11150272 |
T |
 |
| Q |
499 |
aaatacaaatca |
510 |
Q |
| |
|
|||||||||||| |
|
|
| T |
11150273 |
aaatacaaatca |
11150284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 400 - 488
Target Start/End: Complemental strand, 19613375 - 19613287
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagta |
488 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||| |
|
|
| T |
19613375 |
taaagtttcatttaataaaaatcaaataggcatcaaccaacatcttataataacatataagcatcgagaacatttaagaatatcaagta |
19613287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 25127651 - 25127532
Alignment:
| Q |
398 |
tttaaaatttcatttaataaaaat-----caaataggcatcaatcaacatcttata--ataacatataagaatcaacaacatttaagaatatcaagtaga |
490 |
Q |
| |
|
||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
25127651 |
tttaaaatttcatttaataaaaaaaaaaacaaatagacatcaatcaacatcttatataatagcatataaccatcaacaacatttaagaatattaagtaga |
25127552 |
T |
 |
| Q |
491 |
cattaataaaatacaaatca |
510 |
Q |
| |
|
||||| |||||||||||||| |
|
|
| T |
25127551 |
cattagtaaaatacaaatca |
25127532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 426 - 494
Target Start/End: Original strand, 18874736 - 18874804
Alignment:
| Q |
426 |
taggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacatt |
494 |
Q |
| |
|
||||||||||||||||||||||| || ||| |||| || |||| ||||||||||||||||||||||||| |
|
|
| T |
18874736 |
taggcatcaatcaacatcttatattagcatgtaagcattaacaccatttaagaatatcaagtagacatt |
18874804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 406 - 494
Target Start/End: Original strand, 4529645 - 4529731
Alignment:
| Q |
406 |
ttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacatt |
494 |
Q |
| |
|
|||||||||||||| |||| || |||| ||| |||||||||||||||||| |||| ||||||| || ||||||||||||||||| |||| |
|
|
| T |
4529645 |
ttcatttaataaaa-tcaa-tatgcattaattaacatcttataataacatgtaagtatcaacatcaattaagaatatcaagtaggcatt |
4529731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 494
Target Start/End: Complemental strand, 13885501 - 13885416
Alignment:
| Q |
406 |
ttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacatt |
494 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||||||||| |||||||| ||| ||||||| ||||||| |||||||||| ||||| |
|
|
| T |
13885501 |
ttcatttaataaaa-tcaa-taggcattaatcaacatcttat-ataacatacaagtatcaacactatttaagtatatcaagtatacatt |
13885416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 103; Significance: 5e-51; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 400 - 510
Target Start/End: Complemental strand, 3473266 - 3473156
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaataa |
499 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3473266 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataagatataagcatcaacaacatttaagaatatcaagtagacattaataa |
3473167 |
T |
 |
| Q |
500 |
aatacaaatca |
510 |
Q |
| |
|
||||||||||| |
|
|
| T |
3473166 |
aatacaaatca |
3473156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 400 - 510
Target Start/End: Complemental strand, 39729117 - 39729006
Alignment:
| Q |
400 |
taaaatttcatttaataaaaa-tcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaata |
498 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39729117 |
taaaatttcatttaataaaaaatcaaataggcatcaatcaacatcttataagaacatataagcatcaacaacatttaagaatatcaagtagacattaata |
39729018 |
T |
 |
| Q |
499 |
aaatacaaatca |
510 |
Q |
| |
|
|||||||||||| |
|
|
| T |
39729017 |
aaatacaaatca |
39729006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 400 - 508
Target Start/End: Complemental strand, 18539576 - 18539468
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaataa |
499 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
18539576 |
taaaatttcacttaataaaaatcaaataggcgtcaatcaacatcttataatgacatataagcatcaacaacatttaagaatatcaagtagacattagtaa |
18539477 |
T |
 |
| Q |
500 |
aatacaaat |
508 |
Q |
| |
|
||||||||| |
|
|
| T |
18539476 |
aatacaaat |
18539468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 400 - 510
Target Start/End: Complemental strand, 15778757 - 15778646
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagaca-ttaata |
498 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||| || |||| | |
|
|
| T |
15778757 |
taaagtttcatttaataaaaatcaaataggaatcaaccaacatcttataataacatataagcatcgagaacatttaagaatatcaagtaaccacttaaaa |
15778658 |
T |
 |
| Q |
499 |
aaatacaaatca |
510 |
Q |
| |
|
|||||||||||| |
|
|
| T |
15778657 |
aaatacaaatca |
15778646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 494
Target Start/End: Original strand, 19595579 - 19595665
Alignment:
| Q |
406 |
ttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacatt |
494 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||| |||||||| ||| |||| || ||| |||| |||||||||| ||||| |
|
|
| T |
19595579 |
ttcatttaataaaaatcaa-taggcatcaatcaacatcttat-ataacatacaagtatcatcaccatctaagtatatcaagtacacatt |
19595665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 466
Target Start/End: Complemental strand, 3413956 - 3413897
Alignment:
| Q |
406 |
ttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaa |
466 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| || ||| ||||||||||||| ||||| |
|
|
| T |
3413956 |
ttcatttaataaaaatcaa-taggcatcaatcaatatattacaataacatataagcatcaa |
3413897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 482
Target Start/End: Complemental strand, 18694995 - 18694944
Alignment:
| Q |
431 |
atcaatcaacatcttataataacatataagaatcaacaacatttaagaatat |
482 |
Q |
| |
|
|||| |||||||| ||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
18694995 |
atcagtcaacatcctataataacatgtgagcatcaacaacatttaagaatat |
18694944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 482
Target Start/End: Complemental strand, 18710514 - 18710463
Alignment:
| Q |
431 |
atcaatcaacatcttataataacatataagaatcaacaacatttaagaatat |
482 |
Q |
| |
|
|||| |||||||| ||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
18710514 |
atcagtcaacatcctataataacatgtgagcatcaacaacatttaagaatat |
18710463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 91; Significance: 7e-44; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 400 - 510
Target Start/End: Complemental strand, 4860774 - 4860665
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaataa |
499 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4860774 |
taaaatttcatttaataaaaatcaaataggcatcaatcaatat-ttatagtaacatataagcatcaacaacatttaagaatatcaagtagacattaataa |
4860676 |
T |
 |
| Q |
500 |
aatacaaatca |
510 |
Q |
| |
|
||||||||||| |
|
|
| T |
4860675 |
aatacaaatca |
4860665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 400 - 506
Target Start/End: Original strand, 9882096 - 9882202
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaataa |
499 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
9882096 |
taaaatttcatttaataaaaatcaaataggaatcaatcaacatctcataataacatataagcatcaacaacatttaagaatatcaagtagatattaataa |
9882195 |
T |
 |
| Q |
500 |
aatacaa |
506 |
Q |
| |
|
||||||| |
|
|
| T |
9882196 |
aatacaa |
9882202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 400 - 510
Target Start/End: Original strand, 40387361 - 40387471
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaataa |
499 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
40387361 |
taaaattttatttaataaaaatcaaataggcatcaatcaacatcttataataacatataaacatcaacaacatttaagaatatcaattagatattaataa |
40387460 |
T |
 |
| Q |
500 |
aatacaaatca |
510 |
Q |
| |
|
||||||||||| |
|
|
| T |
40387461 |
aatacaaatca |
40387471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 403 - 455
Target Start/End: Original strand, 17289350 - 17289402
Alignment:
| Q |
403 |
aatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacat |
455 |
Q |
| |
|
||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
17289350 |
aatttaatttagtaaaaatctaataggcatcaatcaacatcttataataacat |
17289402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 91; Significance: 7e-44; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 400 - 510
Target Start/End: Original strand, 34892043 - 34892153
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaataa |
499 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
34892043 |
taaaatttcctttaataaaaatcaaataggcatcaatcaaaatcatataataacatataagcatcaacaacatttaagaatgtcaagtagacattaataa |
34892142 |
T |
 |
| Q |
500 |
aatacaaatca |
510 |
Q |
| |
|
||||||||||| |
|
|
| T |
34892143 |
aatacaaatca |
34892153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 409 - 510
Target Start/End: Complemental strand, 16933239 - 16933138
Alignment:
| Q |
409 |
atttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagaca-ttaataaaatacaaa |
507 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
16933239 |
atttaataaaaatcaa-taggcatcaatcgacatcttataataacatataaacgtcaacaacatttaagaatatcaagtagacatttagtaaaatacaaa |
16933141 |
T |
 |
| Q |
508 |
tca |
510 |
Q |
| |
|
||| |
|
|
| T |
16933140 |
tca |
16933138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 400 - 488
Target Start/End: Original strand, 16092094 - 16092181
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagta |
488 |
Q |
| |
|
|||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||| |
|
|
| T |
16092094 |
taaagtttgatttaataaaa-tcaaataggcatcaaccaacatcttataataacatataagcatcgagaacatttaagaatatcaagta |
16092181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 400 - 488
Target Start/End: Complemental strand, 20265133 - 20265045
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagta |
488 |
Q |
| |
|
|||| |||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||| ||| | ||||||||||||||||||||| |
|
|
| T |
20265133 |
taaagtttcatttaataaaaatcgaatagacatcaactaacatctcataataacatataagcatcgataacatttaagaatatcaagta |
20265045 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 404 - 455
Target Start/End: Complemental strand, 24851802 - 24851751
Alignment:
| Q |
404 |
atttcatttaataaaaatcaaataggcatcaatcaacatcttataataacat |
455 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
24851802 |
atttcatttaataaaaatcaaatagacatcaatcaacatcttataataacat |
24851751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 510
Target Start/End: Original strand, 22385348 - 22385449
Alignment:
| Q |
408 |
catttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaataaaatacaaa |
507 |
Q |
| |
|
|||||||||||||||| || || |||||||||||||||||||||| |||| || |||| ||||| |||||||||||||||||||| ||||||||| | |
|
|
| T |
22385348 |
catttaataaaaatcag-taaacaacaatcaacatcttataataacaactaagcattaacatcatttcagaatatcaagtagacattagtaaaatacaga |
22385446 |
T |
 |
| Q |
508 |
tca |
510 |
Q |
| |
|
||| |
|
|
| T |
22385447 |
tca |
22385449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 424 - 482
Target Start/End: Original strand, 20178492 - 20178550
Alignment:
| Q |
424 |
aataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatat |
482 |
Q |
| |
|
||||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||||| |
|
|
| T |
20178492 |
aataggcatcaatcaacatcttaaaatgacaggtaagcatcaacaacatttaagaatat |
20178550 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 485
Target Start/End: Complemental strand, 32625775 - 32625721
Alignment:
| Q |
431 |
atcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaa |
485 |
Q |
| |
|
|||| ||||||||||||||||| || | || |||||||||||||||||||||||| |
|
|
| T |
32625775 |
atcagtcaacatcttataataatatgtgagcatcaacaacatttaagaatatcaa |
32625721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 91; Significance: 7e-44; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 400 - 509
Target Start/End: Original strand, 12784855 - 12784965
Alignment:
| Q |
400 |
taaaatttcatttaataaaa-atcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaata |
498 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12784855 |
taaaatatcatttaataaaaaatcaaataggcatcaatcaacatcttataataacatataagcatcaacaacatttaagaatatcaagtagacattaata |
12784954 |
T |
 |
| Q |
499 |
aaatacaaatc |
509 |
Q |
| |
|
|||| |||||| |
|
|
| T |
12784955 |
aaatgcaaatc |
12784965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 406 - 510
Target Start/End: Original strand, 52272509 - 52272611
Alignment:
| Q |
406 |
ttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaataaaataca |
505 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
52272509 |
ttcatttaataaaaatcaa-taggcatcaatcaacatcttata-taacatacaagtatcaacaacatttaagaatatcaagtaggcattagtaaaataca |
52272606 |
T |
 |
| Q |
506 |
aatca |
510 |
Q |
| |
|
||||| |
|
|
| T |
52272607 |
aatca |
52272611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 400 - 510
Target Start/End: Complemental strand, 23633703 - 23633592
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagaca-ttaata |
498 |
Q |
| |
|
|||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||| || ||| || |
|
|
| T |
23633703 |
taaagtttcatttaataaaagtcaaataagcatcaaccaacatcttataataacatataagcatcgagaacatttaagaatatcaagtaaccacttagta |
23633604 |
T |
 |
| Q |
499 |
aaatacaaatca |
510 |
Q |
| |
|
|||||||||||| |
|
|
| T |
23633603 |
aaatacaaatca |
23633592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 29447204 - 29447135
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaa |
469 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||| |
|
|
| T |
29447204 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatgtgagcatcaacaa |
29447135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 400 - 488
Target Start/End: Complemental strand, 41138447 - 41138359
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagta |
488 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||| | ||| ||||||||||||||||| |
|
|
| T |
41138447 |
taaagtttaatttaataaaaatcaaataggcatcaaccaacattttataataacatataagcatcgagaacttttaagaatatcaagta |
41138359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 430 - 485
Target Start/End: Complemental strand, 18515141 - 18515086
Alignment:
| Q |
430 |
catcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaa |
485 |
Q |
| |
|
||||| |||||||||||||||||||| | || |||||||||||||||||||||||| |
|
|
| T |
18515141 |
catcagtcaacatcttataataacatgtgagcatcaacaacatttaagaatatcaa |
18515086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 485
Target Start/End: Original strand, 89769 - 89818
Alignment:
| Q |
436 |
tcaacatcttataataacatataagaatcaacaacatttaagaatatcaa |
485 |
Q |
| |
|
|||||||||||||||||||| | || |||||||||||||||||||||||| |
|
|
| T |
89769 |
tcaacatcttataataacatgtgagcatcaacaacatttaagaatatcaa |
89818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 400 - 510
Target Start/End: Complemental strand, 172822 - 172711
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacatt-aata |
498 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | |
|
|
| T |
172822 |
taaaatttcatttaaaaaaaatcaaatagacatcaatcaacatcttataataacatataagcatcaacaacatttaagaatatcaagtagacattaaaaa |
172723 |
T |
 |
| Q |
499 |
aaatacaaatca |
510 |
Q |
| |
|
|||||||||||| |
|
|
| T |
172722 |
aaatacaaatca |
172711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 88; Significance: 4e-42; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 400 - 510
Target Start/End: Complemental strand, 19770479 - 19770368
Alignment:
| Q |
400 |
taaaatttcatttaataaaaa-tcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaata |
498 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19770479 |
taaaatttcatttaataaaaaatcaaatagacatcaattaacatcttataataacatataagcatcaacaacatttaagaatatcaagtagacattaata |
19770380 |
T |
 |
| Q |
499 |
aaatacaaatca |
510 |
Q |
| |
|
||||| |||||| |
|
|
| T |
19770379 |
aaataaaaatca |
19770368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 410 - 494
Target Start/End: Original strand, 9547493 - 9547577
Alignment:
| Q |
410 |
tttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacatt |
494 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| |
|
|
| T |
9547493 |
tttaataaaaataaaataggcattaatcaacatcttataataacatataagcatcaacaacatttaagtatatcaagtacacatt |
9547577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 424 - 494
Target Start/End: Original strand, 22468641 - 22468711
Alignment:
| Q |
424 |
aataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacatt |
494 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
22468641 |
aataggcagaaatcaacatcttataataacatgtaagcatcaacaacatttaagaatatcaaatagacatt |
22468711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 400 - 455
Target Start/End: Complemental strand, 19565606 - 19565551
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacat |
455 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
19565606 |
taaaatttcatttaataaaaatcaaataggtatgaatcaacatcttataataacat |
19565551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 452
Target Start/End: Complemental strand, 19568233 - 19568183
Alignment:
| Q |
404 |
atttcatttaataaaaatcaaata--ggcatcaatcaacatcttataataa |
452 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
19568233 |
atttcatttaataaaaatcaaataggggtatcaatcaacatcttataataa |
19568183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0281 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0281
Description:
Target: scaffold0281; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 400 - 510
Target Start/End: Original strand, 427 - 537
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaataa |
499 |
Q |
| |
|
|||| ||||||||||||||||| |||| ||||||||||||| |||||||||| |||||||| |||||||||||||||||||||| | ||||||||| ||| |
|
|
| T |
427 |
taaagtttcatttaataaaaattaaatcggcatcaatcaacgtcttataatagcatataagcatcaacaacatttaagaatatcgactagacattagtaa |
526 |
T |
 |
| Q |
500 |
aatacaaatca |
510 |
Q |
| |
|
||||||||||| |
|
|
| T |
527 |
aatacaaatca |
537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0103 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0103
Description:
Target: scaffold0103; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 409 - 510
Target Start/End: Original strand, 17037 - 17138
Alignment:
| Q |
409 |
atttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagaca-ttaataaaatacaaa |
507 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
17037 |
atttaataaaaatcaa-taggcatcaatcgacatcttataataacatataaacgtcaacaacatttaagaatatcaagtagacatttagtaaaatacaaa |
17135 |
T |
 |
| Q |
508 |
tca |
510 |
Q |
| |
|
||| |
|
|
| T |
17136 |
tca |
17138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 400 - 495
Target Start/End: Original strand, 106542 - 106637
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaat-caacaacatttaagaatatcaagtagacatta |
495 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || || ||||||||||||||||||||||||| |
|
|
| T |
106542 |
taaaatttcatttaataaaaatcaa-taggcatcaatcaacatcttataataacatataagcataaaaaaatatttaagaatatcaagtagacatta |
106637 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 450
Target Start/End: Original strand, 108909 - 108958
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataat |
450 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
108909 |
taaaatttcatttaataaaaatcaa-taggcatcaatcaacatcttataat |
108958 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 400 - 488
Target Start/End: Original strand, 32039497 - 32039585
Alignment:
| Q |
400 |
taaaatttcatttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagta |
488 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||||| |
|
|
| T |
32039497 |
taaagtttcatttaataaaaatcaaataggaatcaaccaacatcttataataacatataagcatcgagaacatttaagaatatcaagta |
32039585 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 400 - 506
Target Start/End: Complemental strand, 39437424 - 39437315
Alignment:
| Q |
400 |
taaaatttcatttaataaaaa-tcaaataggcatcaatcaacatcttata--ataacatataagaatcaacaacatttaagaatatcaagtagacattaa |
496 |
Q |
| |
|
|||||||||| |||||||||| ||||| | ||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
39437424 |
taaaatttcaattaataaaaaatcaaactgacatcaatcaacatcttatataatagcatataagcatcaacaacatttaagaatatcaagtagacattag |
39437325 |
T |
 |
| Q |
497 |
taaaatacaa |
506 |
Q |
| |
|
|||||||||| |
|
|
| T |
39437324 |
taaaatacaa |
39437315 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 510
Target Start/End: Complemental strand, 29497506 - 29497411
Alignment:
| Q |
414 |
ataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagaca-ttaataaaatacaaatca |
510 |
Q |
| |
|
||||||||||| || |||| |||||||||||||| | |||||| ||| ||||||| |||||||| |||||||||| ||| |||| |||||||| |||| |
|
|
| T |
29497506 |
ataaaaatcaa-tatgcatgaatcaacatcttat-acaacatacaagtatcaacaccatttaagtatatcaagtacacatttaaaaaaatacagatca |
29497411 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0043 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 510
Target Start/End: Complemental strand, 67226 - 67126
Alignment:
| Q |
409 |
atttaataaaaatcaaataggcatcaatcaacatcttataataacatataagaatcaacaacatttaagaatatcaagtagacattaataaaatacaaat |
508 |
Q |
| |
|
|||||||||||||||| |||||| |||| ||| |||||||||||||| ||| ||||||| ||||| ||| |||||||||||||||| ||||||||| || |
|
|
| T |
67226 |
atttaataaaaatcaa-taggcaccaattaacgtcttataataacatctaaacatcaacatcatttcagattatcaagtagacattagtaaaatacagat |
67128 |
T |
 |
| Q |
509 |
ca |
510 |
Q |
| |
|
|| |
|
|
| T |
67127 |
ca |
67126 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0048 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0048
Description:
Target: scaffold0048; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 468
Target Start/End: Complemental strand, 69420 - 69384
Alignment:
| Q |
432 |
tcaatcaacatcttataataacatataagaatcaaca |
468 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
69420 |
tcaatcaacatcttataataacatgtaagcatcaaca |
69384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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