View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10230_high_9 (Length: 250)

Name: NF10230_high_9
Description: NF10230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10230_high_9
NF10230_high_9
[»] chr4 (7 HSPs)
chr4 (1-232)||(32822140-32822371)
chr4 (48-125)||(23226018-23226095)
chr4 (52-117)||(41594673-41594738)
chr4 (48-125)||(43095259-43095336)
chr4 (47-87)||(6121969-6122009)
chr4 (71-123)||(35663952-35664004)
chr4 (47-87)||(40913265-40913305)
[»] chr2 (8 HSPs)
chr2 (45-87)||(12338013-12338055)
chr2 (48-125)||(15243990-15244067)
chr2 (44-125)||(37804363-37804444)
chr2 (45-125)||(20900676-20900756)
chr2 (45-87)||(13344496-13344538)
chr2 (68-125)||(40712359-40712415)
chr2 (47-87)||(16243859-16243899)
chr2 (47-87)||(30099258-30099298)
[»] chr8 (5 HSPs)
chr8 (45-114)||(11809126-11809195)
chr8 (47-127)||(42842862-42842942)
chr8 (47-125)||(32211401-32211479)
chr8 (47-87)||(13246808-13246848)
chr8 (47-87)||(39571279-39571319)
[»] chr1 (6 HSPs)
chr1 (48-125)||(40676804-40676881)
chr1 (69-125)||(3694013-3694069)
chr1 (47-79)||(12043687-12043719)
chr1 (47-87)||(23278077-23278117)
chr1 (47-87)||(34042710-34042750)
chr1 (47-87)||(44955282-44955322)
[»] chr7 (1 HSPs)
chr7 (47-87)||(4790262-4790302)
[»] chr6 (3 HSPs)
chr6 (45-87)||(13043770-13043812)
chr6 (47-125)||(35031039-35031117)
chr6 (45-125)||(24579855-24579935)
[»] chr5 (2 HSPs)
chr5 (47-133)||(4443974-4444060)
chr5 (47-87)||(966224-966264)
[»] chr3 (3 HSPs)
chr3 (47-76)||(45093584-45093613)
chr3 (93-125)||(5237578-5237610)
chr3 (47-87)||(38964406-38964446)


Alignment Details
Target: chr4 (Bit Score: 154; Significance: 9e-82; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 32822371 - 32822140
Alignment:
Q  1 caacaaaaaagttgtctacgccatattttgatacgctccatcaattctatttataagaaaaatttagatcaacaaaaatggatgtatatactccaaattt 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  32822371 caacaaaaaagttgtctacgccatattttgatatgctccatccagtctatttataagaaaaatttaggtcaacaaaaatggatgtatatacttcaaattt 32822272  T
Q  101 tgaatcagatacatcaatttttgtttatctaaatttactcaaatatttgttgtacaaagttaannnnnnnnnnnnnnnnnnactgtgttgggatgcatgc 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||                  |||||||||||||||||||    
T  32822271 tgaatcaaatacatcaatttttgtttatctaaatttactcaaatatttgttgtacaaagttaatttttttaattatttttgactgtgttgggatgcatgc 32822172  T
Q  201 ccaacctagaattcattcacgagagagctact 232  Q
    ||||||||||||||||||||||||||||||||    
T  32822171 ccaacctagaattcattcacgagagagctact 32822140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 23226018 - 23226095
Alignment:
Q  48 tatttataagaaaaatttagatcaacaaaaatggatgtatatactccaaattttgaatcagatacatcaatttttgtt 125  Q
    ||||||||||| | |||||||||||||||||| |||||||  | | |||| |||| ||||||||||| || |||||||    
T  23226018 tatttataagagatatttagatcaacaaaaattgatgtatccagttcaaaatttggatcagatacataaacttttgtt 23226095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 41594673 - 41594738
Alignment:
Q  52 tataagaaaaatttagatcaacaaaaatggatgtatatactccaaattttgaatcagatacatcaa 117  Q
    ||||||| ||| || | ||||||||| | |||||||||  ||||||||||||| ||||||||||||    
T  41594673 tataagagaaagttgggtcaacaaaagttgatgtatatggtccaaattttgaaccagatacatcaa 41594738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 43095336 - 43095259
Alignment:
Q  48 tatttataagaaaaatttagatcaacaaaaatggatgtatatactccaaattttgaatcagatacatcaatttttgtt 125  Q
    ||||||||||| | |||||  |||||||||||  |||||| |  ||||||||||||| || |||||| ||||||||||    
T  43095336 tatttataagagatatttaagtcaacaaaaattaatgtatctggtccaaattttgaaccatatacattaatttttgtt 43095259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 6122009 - 6121969
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    |||||||||||| |||||||||||||||||| || ||||||    
T  6122009 ctatttataagagaaatttagatcaacaaaagtgaatgtat 6121969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 35663952 - 35664004
Alignment:
Q  71 aacaaaaatggatgtatatactccaaattttgaatcagatacatcaatttttg 123  Q
    ||||||||| ||||||| |  ||||||||||||| |||||||||||| |||||    
T  35663952 aacaaaaattgatgtatctggtccaaattttgaaccagatacatcaacttttg 35664004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 40913305 - 40913265
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    |||||||||||| |||||||||||||||||| || ||||||    
T  40913305 ctatttataagagaaatttagatcaacaaaagtgaatgtat 40913265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 12338055 - 12338013
Alignment:
Q  45 ttctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  12338055 ttctatttataagaaaaatttaggtcaacaaaaatgaatgtat 12338013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 15243990 - 15244067
Alignment:
Q  48 tatttataagaaaaatttagatcaacaaaaatggatgtatatactccaaattttgaatcagatacatcaatttttgtt 125  Q
    ||||||||||| | ||||  |||||||||| | ||||||| || || |||||||||||||||||||| || |||||||    
T  15243990 tatttataagagatatttgaatcaacaaaagttgatgtatctagtctaaattttgaatcagatacattaacttttgtt 15244067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 37804444 - 37804363
Alignment:
Q  44 attctatttataagaaaaatttagatcaacaaaaatggatgtatatactccaaattttgaatcagatacatcaatttttgtt 125  Q
    |||||||||||||||||||||| |||||||||||||  |||||| |  |  |||  |||||||||||| || ||||||||||    
T  37804444 attctatttataagaaaaatttggatcaacaaaaattaatgtatctgattaaaaaattgaatcagatatattaatttttgtt 37804363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 20900676 - 20900756
Alignment:
Q  45 ttctatttataagaaaaatttagatcaacaaaaatggatgtatatactccaaattttgaatcagatacatcaatttttgtt 125  Q
    |||||||||||||| | |||| | ||| ||||| | ||||||| |  ||||||||||||| ||||||| ||||||||||||    
T  20900676 ttctatttataagagacatttgggtcagcaaaagttgatgtatcttgtccaaattttgaaccagatacgtcaatttttgtt 20900756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 13344496 - 13344538
Alignment:
Q  45 ttctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    |||||||||||||| |||||||| |||||||||||| ||||||    
T  13344496 ttctatttataagagaaatttaggtcaacaaaaatgaatgtat 13344538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 40712359 - 40712415
Alignment:
Q  68 atcaacaaaaatggatgtatatactccaaattttgaatcagatacatcaatttttgtt 125  Q
    |||||||||||| ||||||| || |||||| |||||| |||||||| |||||||||||    
T  40712359 atcaacaaaaatcgatgtatctagtccaaa-tttgaaccagatacaacaatttttgtt 40712415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 16243899 - 16243859
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    ||||||||||||||||||||| ||||||||| || ||||||    
T  16243899 ctatttataagaaaaatttaggtcaacaaaagtgaatgtat 16243859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 30099298 - 30099258
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    |||||||||||| |||||||| |||||||||||| ||||||    
T  30099298 ctatttataagagaaatttaggtcaacaaaaatgaatgtat 30099258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 11809126 - 11809195
Alignment:
Q  45 ttctatttataagaaaaatttagatcaacaaaaatggatgtatatactccaaattttgaatcagatacat 114  Q
    |||||||||||||| | ||||||||||| |||||||||| ||| || ||||| |||| || |||||||||    
T  11809126 ttctatttataagagatatttagatcaataaaaatggatttatctaatccaattttttaaccagatacat 11809195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 42842942 - 42842862
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtatatactccaaattttgaatcagatacatcaatttttgttta 127  Q
    |||||||||||||||| |  ||||||||||||| ||||||| |   | ||||||||||||||||  ||||| |||||||||    
T  42842942 ctatttataagaaaaaatctgatcaacaaaaattgatgtatttgaactaaattttgaatcagatgtatcaacttttgttta 42842862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 32211479 - 32211401
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtatatactccaaattttgaatcagatacatcaatttttgtt 125  Q
    |||||||||||| |||||||| |||||||||||| |||||| |   |  |||||| ||  |||||||||||||||||||    
T  32211479 ctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaatttttgtt 32211401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 13246808 - 13246848
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    |||||||||||| |||||| |||||||||||||| ||||||    
T  13246808 ctatttataagagaaatttggatcaacaaaaatgaatgtat 13246848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 39571319 - 39571279
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    |||||||||||| |||||||||||||||||| || ||||||    
T  39571319 ctatttataagagaaatttagatcaacaaaagtgaatgtat 39571279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 40676804 - 40676881
Alignment:
Q  48 tatttataagaaaaatttagatcaacaaaaatggatgtatatactccaaattttgaatcagatacatcaatttttgtt 125  Q
    ||||||||||||| |||| | ||||||||||||||||||| || ||||| || | ||||| |||||| || |||||||    
T  40676804 tatttataagaaacattttggtcaacaaaaatggatgtatttagtccaatttgttaatcatatacattaacttttgtt 40676881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 3694013 - 3694069
Alignment:
Q  69 tcaacaaaaatggatgtatatactccaaattttgaatcagatacatcaatttttgtt 125  Q
    |||||| |||| ||||||| || | |||||||||||||| |||||| ||||||||||    
T  3694013 tcaacataaattgatgtatttaatacaaattttgaatcaaatacattaatttttgtt 3694069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 12043719 - 12043687
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaat 79  Q
    |||||||||||||||||||| ||||||||||||    
T  12043719 ctatttataagaaaaatttaaatcaacaaaaat 12043687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 23278117 - 23278077
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    |||||||||||| |||||||| |||||||||||| ||||||    
T  23278117 ctatttataagagaaatttaggtcaacaaaaatgaatgtat 23278077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 34042710 - 34042750
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    |||||||||||| |||||||| |||||||||||| ||||||    
T  34042710 ctatttataagagaaatttaggtcaacaaaaatgaatgtat 34042750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 44955322 - 44955282
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    ||||||||||||||||||||| ||||||||| || ||||||    
T  44955322 ctatttataagaaaaatttaggtcaacaaaagtgaatgtat 44955282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 4790262 - 4790302
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  4790262 ctatttataagaaaaatttaggtcaacaaaaatgaatgtat 4790302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 13043770 - 13043812
Alignment:
Q  45 ttctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    |||||||||||||| |||||||| |||||||||||| ||||||    
T  13043770 ttctatttataagagaaatttaggtcaacaaaaatgaatgtat 13043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 35031117 - 35031039
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtatatactccaaattttgaatcagatacatcaatttttgtt 125  Q
    ||||||||||||||||||||| ||||||||| || |||||| |   |  |||||| ||  |||||||||||||||||||    
T  35031117 ctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgtt 35031039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 24579855 - 24579935
Alignment:
Q  45 ttctatttataagaaaaatttagatcaacaaaaatggatgtatatactccaaattttgaatcagatacatcaatttttgtt 125  Q
    ||||||||||| |||| |||| |||| |||||||| ||| ||| || |||||||||||||  | ||  |||||||||||||    
T  24579855 ttctatttatatgaaacattttgatcgacaaaaattgatatatttagtccaaattttgaacaaaatttatcaatttttgtt 24579935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 4443974 - 4444060
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtatatactccaaattttgaatcagatacatcaatttttgtttatctaaa 133  Q
    |||||||||||| |||||||| ||||||||| || |||||| ||  |  |||||| ||  ||||||||||| ||||||| |||||||    
T  4443974 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaaatagatacatcaacttttgttgatctaaa 4444060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 966264 - 966224
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    |||||||||||| |||||| |||||||||||||| ||||||    
T  966264 ctatttataagagaaatttggatcaacaaaaatgaatgtat 966224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 30; Significance: 0.00000008; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 76
Target Start/End: Original strand, 45093584 - 45093613
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaa 76  Q
    ||||||||||||||||||||||||||||||    
T  45093584 ctatttataagaaaaatttagatcaacaaa 45093613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 5237610 - 5237578
Alignment:
Q  93 ccaaattttgaatcagatacatcaatttttgtt 125  Q
    ||||||||||||| |||||||||||||||||||    
T  5237610 ccaaattttgaattagatacatcaatttttgtt 5237578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 38964406 - 38964446
Alignment:
Q  47 ctatttataagaaaaatttagatcaacaaaaatggatgtat 87  Q
    |||||||||||| |||||||||||||||||| || ||||||    
T  38964406 ctatttataagagaaatttagatcaacaaaagtgaatgtat 38964446  T

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