View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10231_low_3 (Length: 375)

Name: NF10231_low_3
Description: NF10231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10231_low_3
NF10231_low_3
[»] chr8 (71 HSPs)
chr8 (1-325)||(23419170-23419492)
chr8 (1-325)||(19699889-19700212)
chr8 (41-325)||(23948031-23948314)
chr8 (2-321)||(17218430-17218749)
chr8 (1-325)||(22254504-22254817)
chr8 (11-325)||(36727039-36727354)
chr8 (106-325)||(17906850-17907067)
chr8 (8-325)||(23899988-23900306)
chr8 (41-325)||(18761218-18761499)
chr8 (8-325)||(20022041-20022351)
chr8 (8-321)||(31722498-31722811)
chr8 (107-325)||(45469220-45469437)
chr8 (4-325)||(13660855-13661174)
chr8 (41-325)||(13719498-13719780)
chr8 (239-325)||(22532133-22532218)
chr8 (239-325)||(22536818-22536903)
chr8 (252-340)||(26454686-26454774)
chr8 (244-325)||(6101754-6101834)
chr8 (244-325)||(20083639-20083719)
chr8 (244-325)||(42817908-42817988)
chr8 (41-133)||(21979657-21979749)
chr8 (41-133)||(21984590-21984682)
chr8 (252-343)||(17158946-17159037)
chr8 (258-325)||(22583661-22583727)
chr8 (1-129)||(20501423-20501551)
chr8 (243-325)||(22317912-22317993)
chr8 (276-325)||(4380618-4380667)
chr8 (221-322)||(6202725-6202824)
chr8 (221-322)||(37292654-37292753)
chr8 (41-133)||(11250966-11251058)
chr8 (252-340)||(23479060-23479148)
chr8 (41-133)||(34951202-34951294)
chr8 (41-133)||(44474884-44474976)
chr8 (252-343)||(16198814-16198905)
chr8 (32-184)||(37516368-37516520)
chr8 (244-322)||(6573060-6573137)
chr8 (255-325)||(20397511-20397580)
chr8 (252-322)||(25657518-25657588)
chr8 (244-325)||(5761505-5761584)
chr8 (244-325)||(19140736-19140815)
chr8 (41-189)||(19928892-19929040)
chr8 (244-316)||(5082222-5082293)
chr8 (252-340)||(19880801-19880888)
chr8 (215-325)||(1485239-1485349)
chr8 (215-325)||(4484117-4484227)
chr8 (215-325)||(14408659-14408769)
chr8 (215-325)||(14824613-14824723)
chr8 (215-325)||(45289762-45289872)
chr8 (8-59)||(45470609-45470660)
chr8 (1-71)||(17907106-17907176)
chr8 (240-322)||(39694281-39694362)
chr8 (255-325)||(39936008-39936077)
chr8 (9-129)||(15003293-15003413)
chr8 (41-133)||(21999628-21999720)
chr8 (215-282)||(22002592-22002660)
chr8 (107-179)||(22318056-22318128)
chr8 (215-282)||(24485297-24485365)
chr8 (296-340)||(41680119-41680163)
chr8 (215-325)||(18677277-18677387)
chr8 (242-325)||(20045410-20045492)
chr8 (258-321)||(23889784-23889846)
chr8 (296-325)||(20517037-20517066)
chr8 (296-325)||(20879494-20879523)
chr8 (41-129)||(22252508-22252596)
chr8 (296-325)||(22474778-22474807)
chr8 (296-325)||(22708325-22708354)
chr8 (116-192)||(3273733-3273809)
chr8 (242-282)||(4541627-4541667)
chr8 (279-335)||(12577885-12577940)
chr8 (41-133)||(21966883-21966975)
chr8 (282-322)||(34758875-34758915)
[»] scaffold0077 (3 HSPs)
scaffold0077 (1-325)||(5677-6001)
scaffold0077 (244-325)||(34310-34390)
scaffold0077 (5-129)||(55005-55129)
[»] chr4 (62 HSPs)
chr4 (1-325)||(32466195-32466519)
chr4 (1-325)||(51993290-51993612)
chr4 (1-325)||(15612821-15613141)
chr4 (123-325)||(21046-21247)
chr4 (5-325)||(21062373-21062692)
chr4 (41-325)||(35811377-35811658)
chr4 (240-321)||(9870449-9870530)
chr4 (240-325)||(9924120-9924205)
chr4 (244-325)||(11425914-11425994)
chr4 (244-325)||(15115193-15115273)
chr4 (244-325)||(25091624-25091704)
chr4 (244-325)||(53630475-53630555)
chr4 (221-325)||(37019619-37019721)
chr4 (252-340)||(40620510-40620598)
chr4 (5-184)||(50160819-50160998)
chr4 (242-325)||(19434560-19434642)
chr4 (244-325)||(10356437-10356517)
chr4 (41-133)||(40907725-40907818)
chr4 (244-325)||(42875768-42875848)
chr4 (1-88)||(20942-21028)
chr4 (239-325)||(14549726-14549811)
chr4 (5-190)||(27996525-27996710)
chr4 (221-322)||(6633541-6633640)
chr4 (240-325)||(11478654-11478739)
chr4 (252-340)||(15008940-15009029)
chr4 (244-325)||(19610295-19610375)
chr4 (215-325)||(19243540-19243650)
chr4 (244-325)||(16998496-16998576)
chr4 (4-184)||(19739471-19739651)
chr4 (9-129)||(33661784-33661904)
chr4 (221-322)||(46001535-46001634)
chr4 (215-282)||(3485806-3485874)
chr4 (215-322)||(15011474-15011580)
chr4 (215-282)||(50221595-50221663)
chr4 (215-325)||(12032986-12033096)
chr4 (5-133)||(13591259-13591387)
chr4 (215-325)||(15117567-15117677)
chr4 (215-325)||(29268193-29268303)
chr4 (280-325)||(2424388-2424433)
chr4 (41-145)||(8711302-8711406)
chr4 (6-83)||(15365383-15365459)
chr4 (116-192)||(9870578-9870654)
chr4 (276-340)||(14186961-14187024)
chr4 (215-286)||(15489508-15489579)
chr4 (41-281)||(16043727-16043966)
chr4 (215-274)||(25031102-25031162)
chr4 (293-340)||(10057680-10057727)
chr4 (215-325)||(44772298-44772408)
chr4 (5-71)||(14852275-14852341)
chr4 (1-82)||(15792425-15792505)
chr4 (9-71)||(18165671-18165733)
chr4 (252-325)||(10694246-10694319)
chr4 (252-325)||(10908012-10908085)
chr4 (296-325)||(12623338-12623367)
chr4 (296-325)||(13165154-13165183)
chr4 (252-300)||(50161065-50161114)
chr4 (215-282)||(7640443-7640511)
chr4 (85-129)||(13882201-13882245)
chr4 (289-325)||(14186067-14186103)
chr4 (215-282)||(14873342-14873410)
chr4 (215-274)||(18238877-18238937)
chr4 (215-282)||(44616128-44616196)
[»] scaffold0671 (1 HSPs)
scaffold0671 (1-325)||(4669-4991)
[»] chr2 (63 HSPs)
chr2 (1-325)||(25045847-25046169)
chr2 (1-325)||(5985905-5986228)
chr2 (1-325)||(14694054-14694377)
chr2 (107-325)||(25142038-25142255)
chr2 (8-325)||(3539570-3539888)
chr2 (107-325)||(27852501-27852719)
chr2 (8-311)||(18390229-18390533)
chr2 (1-325)||(24792760-24793081)
chr2 (107-325)||(22259873-22260089)
chr2 (244-341)||(40912291-40912387)
chr2 (242-325)||(22501939-22502022)
chr2 (242-325)||(22509873-22509956)
chr2 (1-325)||(24834024-24834345)
chr2 (242-340)||(357850-357947)
chr2 (244-325)||(24516157-24516237)
chr2 (107-325)||(44072392-44072608)
chr2 (244-325)||(5031130-5031210)
chr2 (244-325)||(17307457-17307537)
chr2 (247-325)||(2523748-2523825)
chr2 (254-340)||(21080955-21081041)
chr2 (239-324)||(1383545-1383629)
chr2 (244-325)||(9975900-9975980)
chr2 (252-335)||(25184167-25184250)
chr2 (244-322)||(37270670-37270747)
chr2 (244-321)||(19201205-19201281)
chr2 (244-321)||(24436619-24436695)
chr2 (276-325)||(24780841-24780890)
chr2 (252-340)||(21915602-21915690)
chr2 (9-163)||(23375657-23375811)
chr2 (240-325)||(18388191-18388275)
chr2 (244-325)||(22251449-22251529)
chr2 (252-325)||(23068408-23068481)
chr2 (215-325)||(18809780-18809890)
chr2 (215-325)||(23711228-23711338)
chr2 (215-325)||(32038712-32038822)
chr2 (252-318)||(18357975-18358041)
chr2 (240-325)||(19358858-19358942)
chr2 (233-325)||(23131718-23131809)
chr2 (233-325)||(23134185-23134276)
chr2 (215-282)||(28577942-28578010)
chr2 (233-325)||(34401737-34401828)
chr2 (223-282)||(22690585-22690644)
chr2 (215-325)||(26506216-26506326)
chr2 (215-325)||(27919979-27920089)
chr2 (215-325)||(39683153-39683263)
chr2 (296-334)||(23968615-23968653)
chr2 (215-324)||(24897411-24897520)
chr2 (215-324)||(24899894-24900003)
chr2 (215-324)||(24902371-24902480)
chr2 (215-324)||(24904848-24904957)
chr2 (215-324)||(24907323-24907432)
chr2 (302-340)||(34858178-34858216)
chr2 (302-340)||(34873240-34873278)
chr2 (276-325)||(12626428-12626476)
chr2 (296-325)||(14179729-14179758)
chr2 (296-325)||(14183467-14183496)
chr2 (252-325)||(24682205-24682277)
chr2 (8-61)||(25141937-25141990)
chr2 (296-325)||(45535947-45535976)
chr2 (215-274)||(572235-572295)
chr2 (215-282)||(23136405-23136473)
chr2 (215-274)||(26508694-26508754)
chr2 (238-282)||(43946561-43946604)
[»] scaffold0002 (1 HSPs)
scaffold0002 (9-325)||(398298-398613)
[»] chr5 (35 HSPs)
chr5 (5-325)||(10953822-10954140)
chr5 (1-325)||(25249829-25250151)
chr5 (1-325)||(25313613-25313935)
chr5 (118-325)||(20469177-20469383)
chr5 (8-325)||(21617929-21618244)
chr5 (105-340)||(30616447-30616680)
chr5 (252-340)||(17011706-17011794)
chr5 (241-340)||(10774650-10774747)
chr5 (239-325)||(36508634-36508719)
chr5 (221-322)||(7484951-7485050)
chr5 (252-325)||(266016-266089)
chr5 (244-325)||(20566517-20566597)
chr5 (221-325)||(21300045-21300147)
chr5 (252-343)||(29448818-29448909)
chr5 (276-325)||(6551291-6551340)
chr5 (247-316)||(19921612-19921680)
chr5 (239-340)||(31456926-31457026)
chr5 (253-325)||(21914493-21914564)
chr5 (215-282)||(38620273-38620341)
chr5 (223-325)||(39245982-39246083)
chr5 (242-325)||(23065381-23065463)
chr5 (215-325)||(29346818-29346928)
chr5 (215-325)||(29349291-29349401)
chr5 (215-325)||(29351764-29351874)
chr5 (217-284)||(41094859-41094925)
chr5 (215-325)||(42244577-42244687)
chr5 (293-335)||(21554294-21554336)
chr5 (255-325)||(31622099-31622168)
chr5 (296-325)||(14025808-14025837)
chr5 (215-284)||(14048931-14048999)
chr5 (240-325)||(21405629-21405713)
chr5 (296-325)||(26762424-26762453)
chr5 (289-338)||(26832636-26832685)
chr5 (233-282)||(39364240-39364289)
chr5 (215-282)||(264025-264093)
[»] chr6 (50 HSPs)
chr6 (1-325)||(24550169-24550491)
chr6 (6-325)||(31731905-31732224)
chr6 (107-325)||(23501506-23501723)
chr6 (258-325)||(12041621-12041688)
chr6 (241-325)||(15890713-15890796)
chr6 (221-325)||(19401043-19401145)
chr6 (244-327)||(24267820-24267902)
chr6 (221-323)||(18585754-18585854)
chr6 (244-325)||(7827943-7828023)
chr6 (240-325)||(18928647-18928732)
chr6 (244-325)||(19655232-19655312)
chr6 (244-325)||(23150288-23150368)
chr6 (244-340)||(27329967-27330062)
chr6 (244-340)||(27390707-27390802)
chr6 (44-133)||(9621732-9621821)
chr6 (44-133)||(25739094-25739183)
chr6 (215-325)||(19772667-19772776)
chr6 (244-325)||(18703539-18703619)
chr6 (244-325)||(18709474-18709554)
chr6 (41-126)||(23527497-23527582)
chr6 (5-126)||(22375997-22376118)
chr6 (259-325)||(27572123-27572188)
chr6 (263-340)||(15173439-15173516)
chr6 (252-333)||(15900647-15900728)
chr6 (276-325)||(15998891-15998940)
chr6 (252-325)||(22806717-22806790)
chr6 (261-325)||(28948563-28948626)
chr6 (215-325)||(12743157-12743267)
chr6 (215-325)||(18333807-18333917)
chr6 (215-325)||(19858137-19858247)
chr6 (215-325)||(24423384-24423494)
chr6 (215-325)||(33862634-33862744)
chr6 (215-325)||(33865115-33865225)
chr6 (223-325)||(18343037-18343138)
chr6 (116-178)||(20177839-20177901)
chr6 (116-178)||(22158090-22158152)
chr6 (223-325)||(23992970-23993070)
chr6 (252-325)||(15704565-15704638)
chr6 (244-325)||(27125478-27125558)
chr6 (215-325)||(22783065-22783175)
chr6 (215-325)||(26923660-26923770)
chr6 (45-134)||(18453902-18453991)
chr6 (289-335)||(27852221-27852267)
chr6 (215-284)||(13612322-13612390)
chr6 (223-284)||(23527341-23527401)
chr6 (41-129)||(23620417-23620505)
chr6 (296-325)||(31734729-31734758)
chr6 (215-274)||(1540176-1540236)
chr6 (215-282)||(2290435-2290503)
chr6 (282-322)||(29625191-29625231)
[»] chr7 (82 HSPs)
chr7 (1-325)||(36704572-36704895)
chr7 (3-325)||(10658852-10659173)
chr7 (9-325)||(15288840-15289156)
chr7 (8-325)||(4071553-4071871)
chr7 (8-325)||(14218896-14219215)
chr7 (8-325)||(48807326-48807644)
chr7 (108-325)||(16078167-16078381)
chr7 (107-325)||(35771442-35771660)
chr7 (110-325)||(15095638-15095851)
chr7 (11-199)||(13132446-13132636)
chr7 (107-325)||(15140048-15140264)
chr7 (239-325)||(12127164-12127249)
chr7 (239-325)||(13698639-13698725)
chr7 (244-325)||(8851160-8851240)
chr7 (244-325)||(12465261-12465341)
chr7 (244-325)||(20586323-20586403)
chr7 (221-325)||(12372223-12372325)
chr7 (253-325)||(14928290-14928362)
chr7 (253-325)||(15351756-15351828)
chr7 (110-249)||(18074712-18074849)
chr7 (252-335)||(29052173-29052256)
chr7 (239-325)||(12322931-12323016)
chr7 (239-325)||(20620252-20620337)
chr7 (239-325)||(47974821-47974906)
chr7 (244-325)||(11067439-11067519)
chr7 (244-325)||(13147473-13147553)
chr7 (244-325)||(32433590-32433670)
chr7 (41-133)||(13893216-13893308)
chr7 (252-340)||(16549991-16550079)
chr7 (252-340)||(16615583-16615671)
chr7 (253-325)||(33002133-33002204)
chr7 (221-321)||(46386093-46386191)
chr7 (221-322)||(10277276-10277375)
chr7 (244-325)||(20214118-20214198)
chr7 (110-325)||(8135239-8135451)
chr7 (245-325)||(12754613-12754692)
chr7 (253-325)||(14259373-14259445)
chr7 (240-340)||(30820137-30820235)
chr7 (33-126)||(15202940-15203033)
chr7 (276-325)||(4690664-4690713)
chr7 (240-325)||(11054680-11054764)
chr7 (244-325)||(14180399-14180479)
chr7 (221-325)||(15623968-15624069)
chr7 (215-325)||(32302168-32302278)
chr7 (239-335)||(36685137-36685231)
chr7 (215-325)||(457160-457270)
chr7 (5-133)||(9724992-9725120)
chr7 (215-325)||(15375928-15376038)
chr7 (215-325)||(16410897-16411007)
chr7 (215-325)||(18431550-18431660)
chr7 (215-325)||(20384338-20384448)
chr7 (223-325)||(8469283-8469383)
chr7 (255-325)||(24269948-24270017)
chr7 (240-321)||(12557888-12557968)
chr7 (9-129)||(16573983-16574103)
chr7 (9-129)||(16591559-16591679)
chr7 (252-325)||(32160201-32160274)
chr7 (41-129)||(42462642-42462730)
chr7 (276-325)||(44374845-44374894)
chr7 (276-325)||(44383710-44383759)
chr7 (116-192)||(11054556-11054632)
chr7 (215-282)||(13870183-13870251)
chr7 (215-282)||(16460078-16460146)
chr7 (5-81)||(17059813-17059888)
chr7 (215-282)||(41523757-41523825)
chr7 (215-282)||(41526219-41526287)
chr7 (41-96)||(2529427-2529482)
chr7 (215-325)||(14948334-14948444)
chr7 (223-282)||(18628412-18628471)
chr7 (215-325)||(27217699-27217808)
chr7 (5-129)||(9032708-9032832)
chr7 (5-71)||(12318702-12318768)
chr7 (1-53)||(70248-70300)
chr7 (1-53)||(74356-74408)
chr7 (11-56)||(16078069-16078114)
chr7 (233-282)||(16580577-16580626)
chr7 (268-325)||(18955324-18955381)
chr7 (296-325)||(21661278-21661307)
chr7 (296-325)||(33060460-33060489)
chr7 (215-274)||(16233359-16233419)
chr7 (276-325)||(16999436-16999487)
chr7 (215-274)||(32126328-32126388)
[»] chr3 (71 HSPs)
chr3 (38-325)||(12509351-12509637)
chr3 (41-323)||(14250085-14250365)
chr3 (1-323)||(11885560-11885881)
chr3 (105-325)||(16050760-16050978)
chr3 (11-325)||(13185630-13185946)
chr3 (41-340)||(15446854-15447150)
chr3 (10-325)||(11563471-11563776)
chr3 (240-325)||(42323972-42324057)
chr3 (240-309)||(37039016-37039085)
chr3 (252-335)||(16979890-16979973)
chr3 (244-325)||(17044937-17045017)
chr3 (244-325)||(17047097-17047177)
chr3 (240-325)||(19568209-19568293)
chr3 (244-325)||(22306584-22306664)
chr3 (240-325)||(33565053-33565138)
chr3 (244-325)||(40807967-40808047)
chr3 (244-325)||(44274389-44274469)
chr3 (41-133)||(16828471-16828563)
chr3 (239-334)||(24177728-24177822)
chr3 (239-325)||(35960929-35961015)
chr3 (221-322)||(10311476-10311575)
chr3 (244-325)||(11259402-11259482)
chr3 (244-325)||(40812804-40812884)
chr3 (244-325)||(49900701-49900781)
chr3 (6-61)||(16050694-16050749)
chr3 (215-325)||(22758835-22758944)
chr3 (257-340)||(36528851-36528933)
chr3 (244-325)||(17518874-17518954)
chr3 (244-325)||(17533736-17533816)
chr3 (244-325)||(17539077-17539157)
chr3 (276-325)||(17541436-17541485)
chr3 (252-325)||(18699431-18699504)
chr3 (221-325)||(9510917-9511019)
chr3 (221-325)||(9518892-9518994)
chr3 (241-325)||(49968860-49968943)
chr3 (257-340)||(3263949-3264031)
chr3 (244-323)||(14508818-14508896)
chr3 (239-322)||(17694033-17694115)
chr3 (276-322)||(15566746-15566792)
chr3 (244-325)||(41172372-41172452)
chr3 (215-325)||(7780560-7780670)
chr3 (1-88)||(14604593-14604679)
chr3 (215-325)||(17464015-17464125)
chr3 (215-325)||(34160163-34160273)
chr3 (215-325)||(43888756-43888865)
chr3 (239-325)||(10563674-10563759)
chr3 (252-325)||(22652751-22652824)
chr3 (244-321)||(35354573-35354649)
chr3 (285-325)||(5200244-5200284)
chr3 (233-325)||(10246937-10247028)
chr3 (5-88)||(12037391-12037473)
chr3 (215-282)||(13151045-13151113)
chr3 (215-282)||(13153513-13153581)
chr3 (215-282)||(45577698-45577766)
chr3 (215-282)||(55477329-55477397)
chr3 (215-325)||(15978372-15978482)
chr3 (215-325)||(16453490-16453600)
chr3 (12-129)||(30205803-30205920)
chr3 (296-325)||(6003207-6003236)
chr3 (296-325)||(21845653-21845682)
chr3 (1-57)||(23052546-23052602)
chr3 (296-325)||(48631353-48631382)
chr3 (296-325)||(50350817-50350846)
chr3 (296-325)||(53646060-53646089)
chr3 (215-274)||(1864418-1864478)
chr3 (41-184)||(11201992-11202135)
chr3 (9-81)||(11889180-11889251)
chr3 (1-76)||(12933757-12933832)
chr3 (215-282)||(28847876-28847944)
chr3 (239-299)||(35064568-35064627)
chr3 (85-129)||(39231406-39231450)
[»] scaffold0065 (2 HSPs)
scaffold0065 (40-321)||(52549-52829)
scaffold0065 (41-325)||(55710-55992)
[»] chr1 (46 HSPs)
chr1 (1-325)||(42697512-42697835)
chr1 (11-284)||(24727121-24727392)
chr1 (1-325)||(45755249-45755571)
chr1 (41-340)||(12327729-12328026)
chr1 (110-325)||(13302742-13302953)
chr1 (41-183)||(51336268-51336410)
chr1 (110-325)||(7320595-7320808)
chr1 (252-340)||(50001454-50001542)
chr1 (244-325)||(19676682-19676762)
chr1 (244-325)||(21046050-21046130)
chr1 (221-325)||(42912998-42913100)
chr1 (252-335)||(29763623-29763706)
chr1 (261-340)||(51336467-51336545)
chr1 (239-325)||(16058315-16058400)
chr1 (240-325)||(4595854-4595939)
chr1 (241-325)||(21708117-21708200)
chr1 (241-325)||(21712660-21712743)
chr1 (259-335)||(46197736-46197812)
chr1 (242-325)||(21239050-21239132)
chr1 (239-325)||(24723352-24723437)
chr1 (240-325)||(22350683-22350767)
chr1 (240-325)||(51324471-51324555)
chr1 (261-325)||(7051923-7051986)
chr1 (252-321)||(20633636-20633704)
chr1 (215-325)||(13989703-13989813)
chr1 (215-325)||(14237656-14237766)
chr1 (290-325)||(24727383-24727418)
chr1 (215-325)||(51083115-51083225)
chr1 (223-325)||(41373320-41373421)
chr1 (41-129)||(52940220-52940308)
chr1 (233-325)||(16362776-16362867)
chr1 (215-282)||(21474341-21474409)
chr1 (215-282)||(21841608-21841676)
chr1 (215-282)||(23592987-23593055)
chr1 (233-325)||(48444351-48444442)
chr1 (215-325)||(21922504-21922614)
chr1 (5-88)||(24782549-24782631)
chr1 (239-325)||(44822022-44822107)
chr1 (241-286)||(11946409-11946453)
chr1 (296-325)||(14792564-14792593)
chr1 (223-268)||(16381986-16382030)
chr1 (41-82)||(22124969-22125009)
chr1 (296-325)||(41225455-41225484)
chr1 (296-325)||(41226708-41226737)
chr1 (297-325)||(20708060-20708088)
chr1 (85-125)||(28203952-28203992)
[»] scaffold0589 (1 HSPs)
scaffold0589 (5-325)||(4117-4436)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-317)||(126313-126627)
scaffold0010 (5-71)||(1292-1358)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-325)||(29118-29439)
[»] scaffold0075 (2 HSPs)
scaffold0075 (123-325)||(60745-60946)
scaffold0075 (1-88)||(60641-60727)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-325)||(19678-20005)
[»] scaffold0003 (1 HSPs)
scaffold0003 (41-322)||(96167-96446)
[»] scaffold0004 (3 HSPs)
scaffold0004 (108-322)||(110009-110222)
scaffold0004 (239-325)||(328289-328376)
scaffold0004 (9-129)||(204542-204662)
[»] scaffold0071 (1 HSPs)
scaffold0071 (41-340)||(15042-15338)
[»] scaffold0008 (1 HSPs)
scaffold0008 (107-325)||(135505-135721)
[»] scaffold0628 (1 HSPs)
scaffold0628 (8-325)||(1059-1377)
[»] scaffold0017 (1 HSPs)
scaffold0017 (116-274)||(561-718)
[»] scaffold0175 (1 HSPs)
scaffold0175 (107-325)||(8476-8693)
[»] scaffold0056 (2 HSPs)
scaffold0056 (110-325)||(66958-67172)
scaffold0056 (8-52)||(66854-66898)
[»] scaffold0123 (1 HSPs)
scaffold0123 (240-325)||(7243-7328)
[»] scaffold0031 (2 HSPs)
scaffold0031 (107-199)||(108127-108218)
scaffold0031 (215-325)||(56221-56331)
[»] scaffold0028 (6 HSPs)
scaffold0028 (123-325)||(3053-3253)
scaffold0028 (215-325)||(135050-135160)
scaffold0028 (215-325)||(137519-137629)
scaffold0028 (215-325)||(139988-140098)
scaffold0028 (215-325)||(142457-142567)
scaffold0028 (215-325)||(144926-145036)
[»] scaffold0338 (1 HSPs)
scaffold0338 (41-190)||(10895-11044)
[»] scaffold1941 (1 HSPs)
scaffold1941 (244-325)||(109-189)
[»] scaffold0104 (2 HSPs)
scaffold0104 (255-335)||(14938-15018)
scaffold0104 (255-335)||(16958-17038)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-325)||(30838-31159)
[»] scaffold0802 (1 HSPs)
scaffold0802 (243-325)||(4710-4792)
[»] scaffold0230 (2 HSPs)
scaffold0230 (221-323)||(6688-6788)
scaffold0230 (215-325)||(14787-14897)
[»] scaffold1766 (1 HSPs)
scaffold1766 (244-325)||(697-777)
[»] scaffold1633 (1 HSPs)
scaffold1633 (244-325)||(1176-1256)
[»] scaffold1283 (1 HSPs)
scaffold1283 (244-325)||(469-549)
[»] scaffold0207 (1 HSPs)
scaffold0207 (240-325)||(13393-13477)
[»] scaffold0036 (1 HSPs)
scaffold0036 (244-325)||(78186-78266)
[»] scaffold0019 (3 HSPs)
scaffold0019 (244-325)||(24132-24212)
scaffold0019 (215-325)||(30013-30122)
scaffold0019 (215-325)||(158622-158732)
[»] scaffold0138 (2 HSPs)
scaffold0138 (252-340)||(21075-21163)
scaffold0138 (252-340)||(34090-34178)
[»] scaffold0064 (1 HSPs)
scaffold0064 (221-325)||(58695-58797)
[»] scaffold0001 (5 HSPs)
scaffold0001 (221-325)||(77636-77738)
scaffold0001 (41-133)||(162413-162505)
scaffold0001 (244-325)||(31965-32045)
scaffold0001 (244-325)||(37272-37352)
scaffold0001 (41-83)||(498828-498869)
[»] scaffold0956 (1 HSPs)
scaffold0956 (244-323)||(2526-2604)
[»] scaffold0716 (1 HSPs)
scaffold0716 (6-179)||(1797-1970)
[»] scaffold0529 (1 HSPs)
scaffold0529 (5-190)||(3900-4085)
[»] scaffold0251 (1 HSPs)
scaffold0251 (107-325)||(20087-20300)
[»] scaffold0149 (2 HSPs)
scaffold0149 (244-325)||(29574-29654)
scaffold0149 (239-325)||(21577-21662)
[»] scaffold0020 (2 HSPs)
scaffold0020 (244-325)||(143582-143662)
scaffold0020 (244-325)||(169000-169080)
[»] scaffold0515 (1 HSPs)
scaffold0515 (252-340)||(5007-5095)
[»] scaffold0306 (1 HSPs)
scaffold0306 (252-340)||(5007-5095)
[»] scaffold0156 (1 HSPs)
scaffold0156 (239-335)||(16570-16665)
[»] scaffold0057 (1 HSPs)
scaffold0057 (252-340)||(69839-69927)
[»] scaffold0436 (1 HSPs)
scaffold0436 (252-343)||(8938-9029)
[»] scaffold0111 (2 HSPs)
scaffold0111 (244-323)||(5354-5432)
scaffold0111 (244-325)||(12534-12614)
[»] scaffold0034 (3 HSPs)
scaffold0034 (215-325)||(120896-121005)
scaffold0034 (253-335)||(29207-29289)
scaffold0034 (41-129)||(34122-34209)
[»] scaffold0848 (1 HSPs)
scaffold0848 (239-321)||(2026-2107)
[»] scaffold0632 (1 HSPs)
scaffold0632 (244-334)||(1136-1225)
[»] scaffold0577 (1 HSPs)
scaffold0577 (242-340)||(9029-9125)
[»] scaffold0292 (1 HSPs)
scaffold0292 (215-325)||(7498-7606)
[»] scaffold0737 (3 HSPs)
scaffold0737 (252-325)||(4715-4787)
scaffold0737 (242-322)||(5821-5901)
scaffold0737 (124-192)||(5951-6019)
[»] scaffold0411 (1 HSPs)
scaffold0411 (240-325)||(13418-13502)
[»] scaffold0407 (1 HSPs)
scaffold0407 (244-325)||(11275-11355)
[»] scaffold0334 (1 HSPs)
scaffold0334 (244-325)||(489-569)
[»] scaffold0241 (1 HSPs)
scaffold0241 (244-325)||(3153-3233)
[»] scaffold0205 (1 HSPs)
scaffold0205 (252-325)||(30632-30705)
[»] scaffold0203 (1 HSPs)
scaffold0203 (276-325)||(17941-17990)
[»] scaffold0180 (1 HSPs)
scaffold0180 (240-325)||(28330-28414)
[»] scaffold0113 (1 HSPs)
scaffold0113 (252-325)||(35469-35541)
[»] scaffold0083 (3 HSPs)
scaffold0083 (252-325)||(5046-5118)
scaffold0083 (252-325)||(10756-10828)
scaffold0083 (252-343)||(1915-2006)
[»] scaffold0043 (2 HSPs)
scaffold0043 (252-325)||(27955-28028)
scaffold0043 (252-325)||(42813-42886)
[»] scaffold0026 (1 HSPs)
scaffold0026 (244-325)||(146694-146774)
[»] scaffold0007 (1 HSPs)
scaffold0007 (240-325)||(158823-158907)
[»] scaffold0819 (1 HSPs)
scaffold0819 (241-325)||(5335-5417)
[»] scaffold0301 (2 HSPs)
scaffold0301 (41-133)||(11504-11596)
scaffold0301 (41-133)||(15904-15996)
[»] scaffold0098 (2 HSPs)
scaffold0098 (41-133)||(24923-25015)
scaffold0098 (41-133)||(35793-35885)
[»] scaffold0047 (1 HSPs)
scaffold0047 (253-325)||(79029-79100)
[»] scaffold0695 (1 HSPs)
scaffold0695 (215-325)||(6782-6892)
[»] scaffold0256 (1 HSPs)
scaffold0256 (255-318)||(1855-1917)
[»] scaffold0254 (1 HSPs)
scaffold0254 (215-325)||(21588-21698)
[»] scaffold0046 (1 HSPs)
scaffold0046 (252-343)||(21760-21851)
[»] scaffold0016 (1 HSPs)
scaffold0016 (42-133)||(172299-172390)
[»] scaffold0359 (1 HSPs)
scaffold0359 (215-325)||(16276-16384)
[»] scaffold0213 (1 HSPs)
scaffold0213 (276-322)||(19209-19255)
[»] scaffold0080 (1 HSPs)
scaffold0080 (247-325)||(21794-21871)
[»] scaffold0040 (3 HSPs)
scaffold0040 (239-325)||(106052-106137)
scaffold0040 (1-82)||(13992-14072)
scaffold0040 (233-325)||(13034-13125)
[»] scaffold1419 (1 HSPs)
scaffold1419 (41-126)||(727-812)
[»] scaffold1256 (1 HSPs)
scaffold1256 (276-325)||(2201-2250)
[»] scaffold0379 (2 HSPs)
scaffold0379 (41-125)||(4093-4177)
scaffold0379 (41-125)||(14087-14171)
[»] scaffold0282 (1 HSPs)
scaffold0282 (41-129)||(17528-17616)
[»] scaffold0041 (1 HSPs)
scaffold0041 (276-321)||(5712-5757)
[»] scaffold0037 (3 HSPs)
scaffold0037 (240-325)||(81534-81618)
scaffold0037 (240-321)||(112971-113053)
scaffold0037 (256-325)||(117808-117878)
[»] scaffold0032 (1 HSPs)
scaffold0032 (276-325)||(61849-61898)
[»] scaffold0018 (1 HSPs)
scaffold0018 (252-325)||(21673-21746)
[»] scaffold0058 (1 HSPs)
scaffold0058 (252-340)||(6346-6434)
[»] scaffold0859 (1 HSPs)
scaffold0859 (110-185)||(4520-4595)
[»] scaffold0516 (1 HSPs)
scaffold0516 (278-325)||(5306-5353)
[»] scaffold0134 (1 HSPs)
scaffold0134 (215-325)||(38659-38769)
[»] scaffold0100 (1 HSPs)
scaffold0100 (255-322)||(26638-26705)
[»] scaffold0096 (1 HSPs)
scaffold0096 (215-317)||(22040-22141)
[»] scaffold0063 (1 HSPs)
scaffold0063 (215-325)||(38953-39063)
[»] scaffold0029 (1 HSPs)
scaffold0029 (215-325)||(12127-12237)
[»] scaffold0023 (1 HSPs)
scaffold0023 (215-325)||(95248-95358)
[»] scaffold1551 (1 HSPs)
scaffold1551 (6-83)||(155-231)
[»] scaffold0116 (1 HSPs)
scaffold0116 (240-325)||(35465-35549)
[»] scaffold0054 (1 HSPs)
scaffold0054 (41-129)||(75218-75306)
[»] scaffold0546 (1 HSPs)
scaffold0546 (215-322)||(7874-7981)
[»] scaffold0454 (1 HSPs)
scaffold0454 (215-282)||(420-488)
[»] scaffold0331 (1 HSPs)
scaffold0331 (42-125)||(12314-12397)
[»] scaffold0146 (1 HSPs)
scaffold0146 (215-325)||(22926-23037)
[»] scaffold0109 (1 HSPs)
scaffold0109 (215-322)||(5326-5433)
[»] scaffold0535 (1 HSPs)
scaffold0535 (223-282)||(7525-7583)
[»] scaffold0444 (1 HSPs)
scaffold0444 (215-325)||(14231-14341)
[»] scaffold0363 (1 HSPs)
scaffold0363 (223-282)||(10092-10151)
[»] scaffold0285 (1 HSPs)
scaffold0285 (278-325)||(19757-19804)
[»] scaffold0044 (1 HSPs)
scaffold0044 (215-325)||(41237-41347)
[»] scaffold0011 (2 HSPs)
scaffold0011 (256-323)||(126773-126840)
scaffold0011 (296-325)||(33476-33505)
[»] scaffold0780 (1 HSPs)
scaffold0780 (33-83)||(2713-2762)
[»] scaffold0500 (1 HSPs)
scaffold0500 (44-129)||(10902-10987)
[»] scaffold0452 (1 HSPs)
scaffold0452 (252-322)||(12626-12696)
[»] scaffold0394 (1 HSPs)
scaffold0394 (295-325)||(7515-7545)
[»] scaffold0153 (2 HSPs)
scaffold0153 (302-340)||(5325-5363)
scaffold0153 (302-340)||(12345-12383)
[»] scaffold0112 (1 HSPs)
scaffold0112 (255-325)||(2871-2940)
[»] scaffold1939 (1 HSPs)
scaffold1939 (296-325)||(149-178)
[»] scaffold1800 (1 HSPs)
scaffold1800 (296-325)||(629-658)
[»] scaffold1695 (1 HSPs)
scaffold1695 (11-56)||(1144-1189)
[»] scaffold1434 (1 HSPs)
scaffold1434 (296-325)||(1360-1389)
[»] scaffold1128 (1 HSPs)
scaffold1128 (241-286)||(466-510)
[»] scaffold0630 (1 HSPs)
scaffold0630 (296-325)||(9085-9114)
[»] scaffold0439 (1 HSPs)
scaffold0439 (296-325)||(4443-4472)
[»] scaffold0401 (1 HSPs)
scaffold0401 (296-325)||(8843-8872)
[»] scaffold0371 (1 HSPs)
scaffold0371 (296-325)||(10447-10476)
[»] scaffold0337 (1 HSPs)
scaffold0337 (296-325)||(3226-3255)
[»] scaffold0278 (1 HSPs)
scaffold0278 (223-288)||(8673-8737)
[»] scaffold0174 (1 HSPs)
scaffold0174 (289-338)||(13652-13701)
[»] scaffold0059 (1 HSPs)
scaffold0059 (296-325)||(49751-49780)
[»] scaffold0048 (1 HSPs)
scaffold0048 (296-325)||(56995-57024)
[»] scaffold0039 (1 HSPs)
scaffold0039 (296-325)||(9929-9958)
[»] scaffold0601 (1 HSPs)
scaffold0601 (289-325)||(197-233)
[»] scaffold0462 (1 HSPs)
scaffold0462 (260-340)||(11209-11289)
[»] scaffold0107 (1 HSPs)
scaffold0107 (5-81)||(13792-13867)
[»] scaffold0049 (2 HSPs)
scaffold0049 (9-57)||(42336-42384)
scaffold0049 (9-57)||(53031-53079)
[»] scaffold0015 (1 HSPs)
scaffold0015 (41-133)||(209638-209730)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-57)||(307669-307725)


Alignment Details
Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 23419170 - 23419492
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatcc 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||| ||| |    
T  23419170 gaagttcatcactcgcgaggcgagatcagttactcgctatggcgagcgatgaatgtcagctcgggcagaattgcatattttctcaaagctcatccaattc 23419269  T
Q  101 aattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaat 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  23419270 aatggttctaaccttaaaactgattctaatcattgttctatgaatagtctaaggtctggacacaaattctacatcaatttaacatgtttctactcttaat 23419369  T
Q  201 tgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaa 300  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23419370 tgatcaat--tccaacttttaacctaattcttaaatcttccaaaactacatcctacaatatgttaaatccaattctcagaattatacaacttagaattaa 23419467  T
Q  301 agaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||||    
T  23419468 agaaggttagtcccacccttacctt 23419492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 19699889 - 19700212
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctcatcaaatc 99  Q
    |||||||||||||||||||||||   ||| |||||| |||||||| ||||||||||||||| ||||||||| ||| ||||||| |||| |||||| |||     
T  19699889 gaagttcatcactcgcgaggcgaagacagctactcgctatggcgaacgatgaatgtcagctcgggcagaat-gcaaattttctcaaaaactcatccaatt 19699987  T
Q  100 caattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
      || ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  19699988 tcatggttctaaccttaaaactgattctaatcattgttctatgaatattctaaggtctggtcactaattctacatcaatttaacaggttcctattcttaa 19700087  T
Q  200 ttgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatta 299  Q
    || |||||||| ||||||||||||||||| || ||||||| |||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  19700088 ttaatcaattcaccaacttttaacctaatcctcaaatcct-caaaactacaacctacaacatgttaaatccgattcttagaattatacaacttagaatta 19700186  T
Q  300 aagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||    
T  19700187 aagaaggttagtcccacccttacctt 19700212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 41 - 325
Target Start/End: Original strand, 23948031 - 23948314
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgttctaaccttaaaactgattctaatcattgttct 139  Q
    ||||||||||||||||||||| ||||||||| |||| |||||| |||| | || | ||| | || ||||||||||||||||  |||||||||||||||||    
T  23948031 ggcgagcgatgaatgtcagctcgggcagaat-gcagtttttctcaaaaattcacctaattccatggttctaaccttaaaacatattctaatcattgttct 23948129  T
Q  140 atgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaacctaattcttaaatcct 239  Q
    |||||||| ||||||||||||||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||     
T  23948130 atgaatagtctaaggtctggacactatttctacatcaattcaacaggttcctactcttaattaatcaattctccaacttttaacctaattctcaaatcc- 23948228  T
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| |||||||| ||||||||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  23948229 ccaaaactacaacctacaacttgttaaatccacttttcagaatcatacaacttagaattaaagaaggttagtaccacccttacctt 23948314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 2 - 321
Target Start/End: Original strand, 17218430 - 17218749
Alignment:
Q  2 aagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctca-tcaaatc 99  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||| |||| ||||||||||| |||| |||| ||    
T  17218430 aagttcatcactcgcgaggcgagatcagctactcgctatggcaagcgatgaatgtcagctcgggcagaat-gcagtttttcttaaaaactcactcaattc 17218528  T
Q  100 caattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
    || | ||||||| ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||| |||| |||||||| |||||||| ||||||||||    
T  17218529 ca-tggttctaatcttaaaactaattctaatcattgttctgtgaatagtctaaggtctggacactatttctgcatcaattcaacaggttcctactcttaa 17218627  T
Q  200 ttgatcaattctccaactttt-aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatt 298  Q
    || |||||||||||||||||| ||||||||||| ||||||| |||||| ||| |||||||  || |||||| |||| |||||||||||  |||||||| |    
T  17218628 ttaatcaattctccaacttttaaacctaattctcaaatcct-caaaacaacaacctacaaattgctaaatctaattttcagaattataatacttagaact 17218726  T
Q  299 aaagaaggttagtcccaccctta 321  Q
    | |||| ||||||||||||||||    
T  17218727 agagaaagttagtcccaccctta 17218749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 22254504 - 22254817
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctcatcaaatc 99  Q
    ||||||||||||||||||||||||  ||| |||||| || ||||||||||||||||||||| ||||||||| |||| |||||| |||| |||| | |||     
T  22254504 gaagttcatcactcgcgaggcgaggacagctactcgctaaggcgagcgatgaatgtcagctcgggcagaat-gcagtttttctcaaaaactcacccaatt 22254602  T
Q  100 caattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
    | || |||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| || |||||||| ||||||||||    
T  22254603 ccatggtt--aaccttaaaactgattctaatcattgttctatgaatagtctaaggtctggacactatttctacatcagttcaacaggttcctactcttaa 22254700  T
Q  200 ttgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatta 299  Q
    || ||||||||||||||||||||| ||||||| |||||| ||||        |||||||| |||||||||||||| |||||||||||  |||||||||||    
T  22254701 ttaatcaattctccaacttttaacataattctcaaatcc-ccaa--------cctacaacttgttaaatccaattttcagaattataacacttagaatta 22254791  T
Q  300 aagaaggttagtcccacccttacctt 325  Q
     |||| |||||||||||| |||||||    
T  22254792 gagaaagttagtcccaccattacctt 22254817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 11 - 325
Target Start/End: Complemental strand, 36727354 - 36727039
Alignment:
Q  11 actcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagctt---gggcagaattgcagattttcttaaaactcatcaaatccaattgtt 107  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||||| ||||    || |||||| |||| |||    |||||||| | ||| | ||   |    
T  36727354 actcgcgaggcgagaacagctactcgctatggcgagcgatgaatgtaagctctacggacagaat-gcagttttcacaaaaactcacctaattccataact 36727256  T
Q  108 ctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaa 207  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||| || |||||||||||| |||||    
T  36727255 ctaaccttaaaactgattctaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaacagattcctactcttaattaatcaa 36727156  T
Q  208 ttctccaactt-ttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaagg 306  Q
    || |||||||| | ||||||||||| |||||| | ||||||||| |||||||| |||||||||||||| |||||||||||| ||||||||||| |||| |    
T  36727155 tt-tccaacttctaaacctaattctcaaatcc-caaaaactacaacctacaacttgttaaatccaattttcagaattataccacttagaattagagaaag 36727058  T
Q  307 ttagtcccacccttacctt 325  Q
    |||||| ||||||||||||    
T  36727057 ttagtctcacccttacctt 36727039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 106 - 325
Target Start/End: Complemental strand, 17907067 - 17906850
Alignment:
Q  106 ttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatc 205  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||||||||| ||||| || | |||||||||| |||    
T  17907067 ttctaaccttaaaactgattctaatcattgttctatggataatctaaggtctggacactatttctacatcaattcaacagattcccactcttaattaatc 17906968  T
Q  206 aattctccaactttt-aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaa 304  Q
    |||| |||||||||| ||||||||||| |||||| |||| |||||| |||||||| ||||||||||| || ||||||| |||||||||||||||| ||||    
T  17906967 aatt-tccaacttttaaacctaattctcaaatcc-ccaacactacaacctacaacttgttaaatccagtt-tcagaatcatacaacttagaattagagaa 17906871  T
Q  305 ggttagtcccacccttacctt 325  Q
     ||||||||||||||||||||    
T  17906870 agttagtcccacccttacctt 17906850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 23900306 - 23899988
Alignment:
Q  8 atcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagctt---gggcagaattgcagattttcttaaaactcatcaaatccaatt 104  Q
    |||||| |||||||||||  || |||||| |||||||||||||||||||||||||   ||||| ||| |||| |||    |||||||| | ||| | ||     
T  23900306 atcacttgcgaggcgagagaagctactcgctatggcgagcgatgaatgtcagctttacgggcataat-gcagttttcacaaaaactcacctaattccatg 23900208  T
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgat 204  Q
     |||||||||||||||||| | ||||||||| ||||||||||  ||||||||||||||||| ||||||||||||| ||||| || |||||||||||| ||    
T  23900207 attctaaccttaaaactgactgtaatcattgctctatgaataatctaaggtctggacactatttctacatcaattcaacagattcctactcttaattaat 23900108  T
Q  205 caattctccaactt-ttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaaga 303  Q
    ||||| |||||||| | |||||| |||| |||||| ||||||||||| |||||||| |||||||| ||||||||||| |||||  ||||||||||| |||    
T  23900107 caatt-tccaacttctaaacctagttctcaaatcc-ccaaaactacagcctacaacttgttaaattcaattctcagagttatatcacttagaattagaga 23900010  T
Q  304 aggttagtcccacccttacctt 325  Q
    | ||||||| ||||||||||||    
T  23900009 aagttagtcacacccttacctt 23899988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 41 - 325
Target Start/End: Original strand, 18761218 - 18761499
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatcca-attgttctaaccttaaaactgattctaatcattgttct 139  Q
    |||||||||||| | |||||| ||| ||||||||||||||||| |||||||| |  ||||  || |||||||||| |||||||||||||| | |||||||    
T  18761218 ggcgagcgatgagtttcagctcgggtagaattgcagattttctcaaaactca-ctcatcctcatggttctaacctcaaaactgattctaaactttgttct 18761316  T
Q  140 atgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaacctaattcttaaatcct 239  Q
    |||||||| ||||||||||||||||| ||||||||||||||||| | ||  |  ||| |||| ||||||||||||| |||||||||| |||| || ||||    
T  18761317 atgaatagtctaaggtctggacactatttctacatcaatttaaccgtttattcttctcaattaatcaattctccaa-ttttaacctagttctcaactcct 18761415  T
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
     ||||||||| ||| || || ||| |||||| ||| |||||||||||| ||||||||||| |||| ||||||| ||||||||||||    
T  18761416 -caaaactacctcccactacttgtcaaatcc-attttcagaattataccacttagaattagagaaagttagtcgcacccttacctt 18761499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 20022351 - 20022041
Alignment:
Q  8 atcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagctt---gggcagaattgcagattttcttaaaactcatcaaatccaatt 104  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||| |    || |||||| |||| |||    |||||||| | ||| | ||     
T  20022351 atcactcgcgaggcgagaacagttactcgctatggcgagcgatgaatgtcagttctacggccagaat-gcagttttcaacaaaactcacctaattccata 20022253  T
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgat 204  Q
      ||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | ||| |||| |||||||| | |     
T  20022252 actctaaccttaaaattgattctaatcattgttctatgaataacctaaggtctagacactaattctacatcaattcatcagatttccactcttaaatcaa 20022153  T
Q  205 caattctccaactt-ttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaaga 303  Q
    | | | | |||||| | ||||||||||         ||||||||||| |||||||| |||||||| | ||| |||||||||||| ||||||||||| |||    
T  20022152 ccaat-tacaacttctaaacctaattc---------ccaaaactacaacctacaacttgttaaattcgattttcagaattataccacttagaattagaga 20022063  T
Q  304 aggttagtcccacccttacctt 325  Q
    | ||||||||||||||||||||    
T  20022062 aagttagtcccacccttacctt 20022041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 321
Target Start/End: Complemental strand, 31722811 - 31722498
Alignment:
Q  8 atcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagctt---gggcagaattgcagattttcttaaaactcatcaaatccaatt 104  Q
    |||||| | ||||||||| | |||||||| |||||||||||||||||||||| |    ||||||||| |||| |||    |||||||| ||| |||| |     
T  31722811 atcacttgtgaggcgagaactgttactcgctatggcgagcgatgaatgtcagttctacgggcagaat-gcagttttcaacaaaactcaccaattcca-tg 31722714  T
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgat 204  Q
      |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||| | |     
T  31722713 actctaaccttaaaactgattctaatcattgttctatggataacctaaggtctggacattaattctacatcaattcaacagatttctactcttaaatcaa 31722614  T
Q  205 caattctccaactt-ttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaaga 303  Q
    | | | | |||||| | |||| ||||   |||| | ||||||||||| |||||||| |||||||| | ||| ||| |||||||| ||||||||||| |||    
T  31722613 ccaat-tacaacttctaaaccaaatttccaaattc-ccaaaactacaacctacaacttgttaaattcgattttcaaaattataccacttagaattagaga 31722516  T
Q  304 aggttagtcccaccctta 321  Q
    | ||||||||||||||||    
T  31722515 aagttagtcccaccctta 31722498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 107 - 325
Target Start/End: Complemental strand, 45469437 - 45469220
Alignment:
Q  107 tctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatca 206  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||| | ||  ||||||||||||| | | |     
T  45469437 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctagacactatttctacatcaattcatcaaatttctactcttaaatcaacc 45469338  T
Q  207 attctccaactt-ttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaag 305  Q
    | | | |||||| | ||| ||||||  ||||  | |||||||| | |||||||| |||||||| | ||| |||||||||||| ||||||||||| ||||     
T  45469337 aat-tacaacttctaaacataattcccaaat-ttacaaaactataacctacaacttgttaaattcgattttcagaattataccacttagaattagagaaa 45469240  T
Q  306 gttagtcccacccttacctt 325  Q
    ||||||| ||||||||||||    
T  45469239 gttagtctcacccttacctt 45469220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 325
Target Start/End: Complemental strand, 13661174 - 13660855
Alignment:
Q  4 gttcatcactcgcgaggcgag-atcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaa 102  Q
    ||||||| ||||||||||||| |||| |||| ||  | |||||||||||||||||| || ||||||||| ||||||||||| |||||||||| ||| | |    
T  13661174 gttcatccctcgcgaggcgaggatca-ttacacgccagggcgagcgatgaatgtcaactcgggcagaatcgcagattttctcaaaactcatctaattcca 13661076  T
Q  103 ttgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattg 202  Q
    | |||||||||||||||||||||||||| |||||| |||||||   |||||||||| || |   ||||||||||| ||||||| |||| |   |  | |     
T  13661075 tggttctaaccttaaaactgattctaataattgttatatgaattatctaaggtctgtactcagtttctacatcaaattaacagttttccatcatctaatc 13660976  T
Q  203 atcaattctccaacttttaa-cctaattcttaaatcctccaaaactacatcctacaa-catgttaaatccaattctcagaattatacaacttagaattaa 300  Q
    ||||||||  | ||||| || ||||||||| ||||  || |||||| || ||||||| |||||||||| ||||| ||||||| | |  ||| |||||||     
T  13660975 atcaattcatc-actttgaaccctaattctcaaat--tctaaaacttcaacctacaaccatgttaaattcaattttcagaatcaca-tactcagaattat 13660880  T
Q  301 agaaggttagtcccacccttacctt 325  Q
     ||||||||||||||||||||||||    
T  13660879 tgaaggttagtcccacccttacctt 13660855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 325
Target Start/End: Complemental strand, 13719780 - 13719498
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcattgttcta 140  Q
    |||||||||||||||||| || ||||||||| ||||||||||| |||||||||| ||| | || |||||||||||||||||||||||||| |||||| ||    
T  13719780 ggcgagcgatgaatgtcaactcgggcagaatcgcagattttctcaaaactcatctaattccatggttctaaccttaaaactgattctaataattgttata 13719681  T
Q  141 tgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaa-cctaattcttaaatcct 239  Q
    |||||   |||||||||| || |   ||||||||||| ||||||| |||| |   |  | | ||||||||  | ||||| || ||||||||| ||||  |    
T  13719680 tgaattatctaaggtctgtactcagtttctacatcaaattaacagttttccatcatctaatcatcaattcatc-actttgaaccctaattctcaaat--t 13719584  T
Q  240 ccaaaactacatcctacaa-catgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    | |||||| || ||||||| |||||||||| ||||| ||||||| | |  ||| |||||||  ||||||||||||||||||||||||    
T  13719583 ctaaaacttcaacctacaaccatgttaaattcaattttcagaatcaca-tactcagaattattgaaggttagtcccacccttacctt 13719498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 22532218 - 22532133
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||| ||||| || ||||||||||| || ||||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  22532218 tccaaaactacaacctaccacctgttaaatccagtt-tcagaatcatacaacttagaattagagaaagttagtcccacccttacctt 22532133  T

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Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 22536903 - 22536818
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||| ||||| || ||||||||||| || ||||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  22536903 tccaaaactacaacctaccacctgttaaatccagtt-tcagaatcatacaacttagaattagagaaagttagtcccacccttacctt 22536818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 26454686 - 26454774
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  26454686 cctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgg 26454774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 6101834 - 6101754
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  6101834 aactacaacctacaacatgctaaacacaatt-tcagaattatacaacttagaattagagaaagttagtcccacctttacctt 6101754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 20083719 - 20083639
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  20083719 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcacccttacctt 20083639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 42817988 - 42817908
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| || |||||||||||||||||    
T  42817988 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagtaagtcccacccttacctt 42817908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 21979749 - 21979657
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    |||||||||||||| |||||| ||||||||  |||||||||| ||||| ||| | ||||| || |||||| ||||||||||||||| ||||||    
T  21979749 ggcgagcgatgaatctcagctcgggcagaaacgcagattttcataaaaatcacccaatcccatagttctatccttaaaactgattcaaatcat 21979657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 21984682 - 21984590
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    |||||||||||||| |||||| ||||||||  |||||||||| ||||| ||| | ||||| || |||||| ||||||||||||||| ||||||    
T  21984682 ggcgagcgatgaatctcagctcgggcagaaacgcagattttcataaaaatcacccaatcccatggttctatccttaaaactgattcaaatcat 21984590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 252 - 343
Target Start/End: Complemental strand, 17159037 - 17158946
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcggtgg 343  Q
    |||||| ||||||||||| | || ||| ||||| |  ||||||||||| |||| |||||||||||||||||||| ||||||||| |||||||    
T  17159037 cctacatcatgttaaatctagttttcaaaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggtgg 17158946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 22583727 - 22583661
Alignment:
Q  258 acatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  22583727 acatgttaaattcaatt-tcagaattatacaacctagaattaaagaatgttaatcccacccttacctt 22583661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 20501551 - 20501423
Alignment:
Q  1 gaagttcatcactcgcgaggcgag-atcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttc-ttaaaactcatcaaat 98  Q
    |||||||||||||||||||| ||| |||| | |||||  | ||||||||||||||||||||| |||||||| ||||| ||||| | ||||  ||||||||    
T  20501551 gaagttcatcactcgcgaggtgaggatca-tcactcgccagggcgagcgatgaatgtcagctcgggcagaa-tgcagtttttcatgaaaatgcatcaaat 20501454  T
Q  99 ccaattgttctaaccttaaaactgattctaa 129  Q
    |  || ||||||| |||||||||||||||||    
T  20501453 cacatggttctaagcttaaaactgattctaa 20501423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 22317993 - 22317912
Alignment:
Q  243 aaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||| |||| ||| |||||||| ||||| ||||||| ||||| ||||||||||  ||||||||||||||||||||||||    
T  22317993 aaactacaacctagaacctgttaaattcaattttcagaatcataca-cttagaattagtgaaggttagtcccacccttacctt 22317912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 4380667 - 4380618
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  4380667 tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 4380618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 6202725 - 6202824
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| ||| | ||||||| |||||||||||  |||| ||||| ||||||||||||||| |||||||| |||| ||||||| |||||||    
T  6202725 aacctaattctcaaattctc-ataactacaacctacaacatgcaaaattcaatt-tcagaattatacaacgtagaattagagaaagttagtctcaccctt 6202822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 37292654 - 37292753
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| ||| | ||||||| ||||||||||| ||||   |||| ||||||||||||||| |||||||| |||| |||||||||||||||    
T  37292654 aacctaattctcaaattctc-ataactacaacctacaacatgctaaacttaatt-tcagaattatacaacgtagaattagagaaagttagtcccaccctt 37292751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 11251058 - 11250966
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||| ||| | ||||| || ||||||  | |||||||| ||||||||||    
T  11251058 ggcgagcgatgaatctcagctcgggcagaaatgcagattttcataaaaatcacccaatcccatggttctattcataaaactggttctaatcat 11250966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 23479060 - 23479148
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| ||||||||||||| || ||| ||||  |  ||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  23479060 cctacatcatgttaaatccagttttcataatttaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgg 23479148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 34951202 - 34951294
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    |||||||||||||| |||||| ||||||||  |||||||||| ||||| |||   ||||  || |||||| ||||||||||||||||||||||    
T  34951202 ggcgagcgatgaatctcagctcgggcagaaacgcagattttcataaaaatcactcaatcacatggttctatccttaaaactgattctaatcat 34951294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 44474976 - 44474884
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    ||||||| |||||| |||||| ||||||||  ||| |||||| ||||| ||| | ||||| || |||||| ||||||||||||||||||||||    
T  44474976 ggcgagcaatgaatctcagctcgggcagaaacgcatattttcataaaaatcacccaatcccatggttctatccttaaaactgattctaatcat 44474884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 16198814 - 16198905
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcggtgg 343  Q
    |||||| ||||||||||||| || ||||||| | |  ||||||||||| |||| |||||||||||  ||||||| ||||||||| |||||||    
T  16198814 cctacatcatgttaaatccagttttcagaatgaaaatacttagaattagagaaagttagtcccacttttaccttagtattgatgatcggtgg 16198905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 37516368 - 37516520
Alignment:
Q  32 actcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttct--taaaactcatcaaatccaattgttctaaccttaaaactgattctaa 129  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||||||||  || || ||||| ||||  ||  ||||||||||||||||||||  ||    
T  37516368 actcgctatggcgagcgatgaatgtcagctcgggcagaa-tgcagattttctcctagaa-tcatccaatctcatgtttctaaccttaaaactgatttcaa 37516465  T
Q  130 tcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaaca 184  Q
    | ||  | ||||| ||   |||||||||| |||| | ||||||||||||| ||||    
T  37516466 ttatcatcctatggattatctaaggtctgtacacaatttctacatcaattcaaca 37516520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 322
Target Start/End: Complemental strand, 6573137 - 6573060
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    ||||||| ||||||||||| ||||  ||||| ||| |||||||||||||||||||| |||| ||||||| |||||||||    
T  6573137 aactacaacctacaacatgctaaactcaatt-tcaaaattatacaacttagaattagagaaagttagtctcacccttac 6573060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 325
Target Start/End: Complemental strand, 20397580 - 20397511
Alignment:
Q  255 acaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||| ||||  ||||| |||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  20397580 acaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttaatcccacccttacctt 20397511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 25657588 - 25657518
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    |||||| |||||||||||||||| ||||||||| |  ||||||||||| |||| |||| ||||||||||||    
T  25657588 cctacatcatgttaaatccaattttcagaattaaaatacttagaattagagaaagttactcccacccttac 25657518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 5761505 - 5761584
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| ||| ||||||||| |||||||||| |||| ||||||||||||||||||||    
T  5761505 aactacaacctacaacatgctaaactcaatt-tcaaaattataca-cttagaattagagaaagttagtcccacccttacctt 5761584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 19140736 - 19140815
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| |||||||| || ||||  ||||| |||||||||||||||||||||||| |||| | ||||||||||||||||||    
T  19140736 aactacaacctacaacttgctaaactcaatt-tcagaattatacaacttagaattagagaaag-tagtcccacccttacctt 19140815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 189
Target Start/End: Complemental strand, 19929040 - 19928892
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttctt-aaaactcatcaaatccaattgttctaaccttaaaactgattctaatcattgttct 139  Q
    ||||||||||||||||||||| ||||| ||| || ||||||||  |||| ||| | ||||  || |||||||||||||||||||||| ||| ||  ||||    
T  19929040 ggcgagcgatgaatgtcagctcgggcaaaat-gctgattttctccaaaaatcacctaatctcatggttctaaccttaaaactgattccaattatcattct 19928942  T
Q  140 atgaatagcctaaggtctggacactaattctacatcaatttaacaggttt 189  Q
    ||| ||   |||||||||| ||||   ||||||||||||| |||| ||||    
T  19928941 atggattatctaaggtctgtacacagtttctacatcaattcaacaagttt 19928892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 316
Target Start/End: Complemental strand, 5082293 - 5082222
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccac 316  Q
    ||||||| ||||||||||| ||||  ||||| ||| |||||||||||||||||||| |||| |||||||||||    
T  5082293 aactacaacctacaacatgctaaactcaatt-tcataattatacaacttagaattagagaaagttagtcccac 5082222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 19880801 - 19880888
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| ||||||||||  | || ||||||||| | | |||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  19880801 cctacatcatgttaaatttagttttcagaattaaa-atcttagaattagagaaagttagtcccacccttaccttagtattgatgatcgg 19880888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 1485239 - 1485349
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  1485239 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 1485337  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  1485338 cacccttacctt 1485349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 4484117 - 4484227
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  4484117 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 4484215  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  4484216 cacccttacctt 4484227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 14408769 - 14408659
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  14408769 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 14408671  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  14408670 cacccttacctt 14408659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 14824613 - 14824723
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  14824613 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 14824711  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  14824712 cacccttacctt 14824723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 45289872 - 45289762
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| | ||||| |||  |||||  ||||  ||| ||||||||    
T  45289872 acttttaaccctaattcccaaattctcaaaaactaaaccctacaacatgttaaatccaatttttagaatcata-gacttaagattattgaatgttagtcc 45289774  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  45289773 cacccttacctt 45289762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 45470660 - 45470609
Alignment:
Q  8 atcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcag 59  Q
    ||||||||||||  |||| |||||||||| ||||||||||||||||||||||    
T  45470660 atcactcgcgagttgagaacagttactcgctatggcgagcgatgaatgtcag 45470609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17907176 - 17907106
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaat 71  Q
    |||| ||||||| ||||||| ||||  || |||||| ||||||| |||||||||||||||| |||||||||    
T  17907176 gaagatcatcacgcgcgaggagagagaagctactcgctatggcgggcgatgaatgtcagctcgggcagaat 17907106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 39694362 - 39694281
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    ||||||||||| |||||||| ||||||||||| || ||||||| |||||||||| ||||| |||| | ||||| | |||||||    
T  39694362 ccaaaactacaacctacaacttgttaaatccagtt-tcagaatcatacaacttataattagagaaagctagtcacgcccttac 39694281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 325
Target Start/End: Complemental strand, 39936077 - 39936008
Alignment:
Q  255 acaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||| ||||  ||||| ||| |||||||||||||||||||| |||| |||| |||||||||||||||    
T  39936077 acaacatgctaaactcaatt-tcataattatacaacttagaattagagaaagttaatcccacccttacctt 39936008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 129
Target Start/End: Complemental strand, 15003413 - 15003293
Alignment:
Q  9 tcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgtt 107  Q
    |||||||||||||||||  || ||||||    ||||||||||||||||| |   ||||||| |||||| |||||| |||| | || | ||||| ||||||    
T  15003413 tcactcgcgaggcgagacaagctactcgcggaggcgagcgatgaatgtctgtacgggcaga-ttgcagtttttctcaaaaattcacccaatcccattgtt 15003315  T
Q  108 ctaaccttaaaactgattctaa 129  Q
    |||||||||||||| |||||||    
T  15003314 ctaaccttaaaactaattctaa 15003293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 21999720 - 21999628
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    |||||||||||||| |||||| ||| ||||  ||| |||||| || || ||| | ||||| || |||||| ||||||||||||||| ||||||    
T  21999720 ggcgagcgatgaatctcagctcgggtagaaacgcatattttcatagaaatcacccaatcccatggttctatccttaaaactgattcaaatcat 21999628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 22002592 - 22002660
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||| |||| ||| ||||| | | ||||||||||||||||||||||| |||||||    
T  22002592 acttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaat 22002660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 22318128 - 22318056
Alignment:
Q  107 tctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatt 179  Q
    ||||||| |||||||||||||||||||| | |||||||||  ||||||| || || ||  |||||||||||||    
T  22318128 tctaaccctaaaactgattctaatcattttactatgaataatctaaggtttgaactctgtttctacatcaatt 22318056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 24485365 - 24485297
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| |||||| ||||| ||| ||||||| | ||||||||||||||||| ||||| |||||||    
T  24485365 acttttaaccctaattcctaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaat 24485297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 41680163 - 41680119
Alignment:
Q  296 attaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||    
T  41680163 attaaagaaggttagtcccacctttaccttagtattgatgatcgg 41680119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 18677387 - 18677277
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||| | | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  18677387 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 18677289  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  18677288 cacccttacctt 18677277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 325
Target Start/End: Complemental strand, 20045492 - 20045410
Alignment:
Q  242 aaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||||||||||||||    
T  20045492 aaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcccacccttacctt 20045410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 321
Target Start/End: Original strand, 23889784 - 23889846
Alignment:
Q  258 acatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctta 321  Q
    ||||||||||| ||||| ||||||||||||||| |||||||| |||| |||| || ||||||||    
T  23889784 acatgttaaattcaatt-tcagaattatacaacctagaattagagaaagttaatctcaccctta 23889846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 20517066 - 20517037
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  20517066 attaaagaaggttagtcccacccttacctt 20517037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 20879494 - 20879523
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  20879494 attaaagaaggttagtcccacccttacctt 20879523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 22252596 - 22252508
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgttctaaccttaaaactgattctaa 129  Q
    |||||||||||||||| |||| ||||||||| ||| ||||||   ||| | |||||||||  || ||||||| |||||||||||||||||    
T  22252596 ggcgagcgatgaatgtgagctcgggcagaat-gcaaattttcacgaaaatgcatcaaatcacatggttctaagcttaaaactgattctaa 22252508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 22474778 - 22474807
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  22474778 attaaagaaggttagtcccacccttacctt 22474807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 22708354 - 22708325
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  22708354 attaaagaaggttagtcccacccttacctt 22708325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 3273733 - 3273809
Alignment:
Q  116 aaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttcta 192  Q
    ||||||| ||||||||||||| ||||||| |  ||||||| || ||||| ||||| ||| |||| ||| ||||||||    
T  3273733 aaaactggttctaatcattgtactatgaacaatctaaggtatgaacactgattcttcattaattcaaccggtttcta 3273809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 4541667 - 4541627
Alignment:
Q  242 aaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    ||||||| | ||||||||||||||||||||||| |||||||    
T  4541667 aaaactaaaacctacaacatgttaaatccaattttcagaat 4541627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 12577885 - 12577940
Alignment:
Q  279 gaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatg 335  Q
    ||||||||||||| |  |||| |||| |||||||||||||||||||| |||||||||    
T  12577885 gaattatacaact-attattagagaaagttagtcccacccttaccttagtattgatg 12577940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 21966975 - 21966883
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    |||||||||||||| ||||||  |||||||  |||||||||| ||||| ||| | ||||| || ||| || |||||||  |||||| ||||||    
T  21966975 ggcgagcgatgaatctcagctccggcagaaacgcagattttcataaaaatcaccgaatcccatggttatatccttaaatttgattcaaatcat 21966883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 34758875 - 34758915
Alignment:
Q  282 ttatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    ||||||||| |||||||| |||| |||||||||||||||||    
T  34758875 ttatacaacgtagaattagagaaagttagtcccacccttac 34758915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 258; Significance: 1e-143; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 5677 - 6001
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagatttt-cttaaaactcatcaaatc 99  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||| || ||||||||||||||||||| || |||||||||| |||     
T  5677 gaagttcatccctcgcgaggcgagatcagttactcgctatggcgagcgattaatgtcaactcgggcagaattgcagatttttctcaaaactcatccaatt 5776  T
Q  100 caattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5777 caatggttctaaccttaaaactgattctaatcattgctatatgaatagtctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 5876  T
Q  200 ttgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatta 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  5877 ttgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaattcaatt-tcagaattatacaacttagaatta 5975  T
Q  300 aagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||    
T  5976 aagaaggttagtcccacccttacctt 6001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 34310 - 34390
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| ||||||||| |||| ||||||||| |||| ||||||||||||||||||||    
T  34310 aactacaacctacaacatgctaaactcaatt-tcagaattaaacaaattagaattagagaaagttagtcccacccttacctt 34390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 55129 - 55005
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttctt-aaaactcatcaaatccaat 103  Q
    |||||| ||||||||||||||  || | ||||  | || |||||||||||||||||| ||||||||| |||||||||    |||| |||||||| |  ||    
T  55129 ttcatccctcgcgaggcgagacaagctgctcgcgagggtgagcgatgaatgtcagctcgggcagaat-gcagatttttacgaaaattcatcaaaacacat 55031  T
Q  104 tgttctaaccttaaaactgattctaa 129  Q
     ||||||| |||||||||||||||||    
T  55030 ggttctaagcttaaaactgattctaa 55005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 32466519 - 32466195
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatcc 100  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| |||||||||| ||| |    
T  32466519 gaagttcatcactcgcgaggtgagatcagttactcgctatggcgagcgatgaatgtcagctcgggcagaattgctgattttctcaaaactcatccaattc 32466420  T
Q  101 aattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaat 200  Q
    ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32466419 aatggttctaaccttaaaacttattctaatcattgttctatgaatagtctaaggtctggacactaattctacatcaatttaacaggtttctactcttaat 32466320  T
Q  201 tgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaa 300  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||||||    
T  32466319 tgatcaattctccaacttttaacctaattcttaaatcttccaaaactacatcctagaacatgttaaatccgaatctcagaattacacaacttagaattaa 32466220  T
Q  301 agaaggttagtcccacccttacctt 325  Q
    ||||| |||||| ||||||||||||    
T  32466219 agaagattagtctcacccttacctt 32466195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 51993290 - 51993612
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatcc 100  Q
    |||||||||||||||||||||||||||   | |||| |||||||||||||||||||||||| |||||||||||| |||||||| |||||||||| ||| |    
T  51993290 gaagttcatcactcgcgaggcgagatcgtctgctcgctatggcgagcgatgaatgtcagctcgggcagaattgccgattttctcaaaactcatccaattc 51993389  T
Q  101 aattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaat 200  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||||||||    
T  51993390 aatggttttaaccttaaaactgattctaatcattgttctatgaatagtctaaggtctggacactaattctacatcaaattaatagg-ttctactcttaat 51993488  T
Q  201 tgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaa 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  51993489 tgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaatt-tcagaattacacaacttagaattaa 51993587  T
Q  301 agaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||||    
T  51993588 agaaggttagtcccacccttacctt 51993612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 15612821 - 15613141
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatcc 100  Q
    |||||||||||||||||||| |||  ||| |||||| ||||||||||||||||||||||||  |||||||| ||||||||||| |||||||||| ||| |    
T  15612821 gaagttcatcactcgcgaggggaggacagctactcgctatggcgagcgatgaatgtcagctcaggcagaat-gcagattttctcaaaactcatccaattc 15612919  T
Q  101 aattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaat 200  Q
     || ||||||||||||||||||||  ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||  ||||||    
T  15612920 catggttctaaccttaaaactgatcataatcattgttctatgaatagtctaaggtctgaacactaattctacatcaatttaacaggtttcta--cttaat 15613017  T
Q  201 tgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaa 300  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15613018 tgatcaattcttcaacttttaacctaatccttaaatcctccaaaactacatcctacaacatgttaaatccaatt-tcagaattatacaacttagaattaa 15613116  T
Q  301 agaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||||    
T  15613117 agaaggttagtcccacccttacctt 15613141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 123 - 325
Target Start/End: Original strand, 21046 - 21247
Alignment:
Q  123 attctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaa 222  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  21046 attctaatcattgttctatgaatagtctaaggtctggtcactaattctacatcaatttaacaggttcctactcttaattaatcaattcaccaacttttaa 21145  T
Q  223 cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  21146 cctaattctcaaatcct-caaaactacaacctacaacatgttaaattcaattctcagaattatacaacttagaattaaagaaggttagtctcatccttac 21244  T
Q  323 ctt 325  Q
    |||    
T  21245 ctt 21247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 5 - 325
Target Start/End: Original strand, 21062373 - 21062692
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctcatc-aaatccaa 102  Q
    ||||||||||| |||||||||  || |||||| || |||||| |||||||||||||  ||| ||||| |||| |||||| |||| |||| | |||||||     
T  21062373 ttcatcactcgtgaggcgagaatagctactcgctaaggcgagtgatgaatgtcagcacgggaagaat-gcagtttttctcaaaaactcacccaaatcca- 21062470  T
Q  103 ttgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattg 202  Q
    | ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||| |||| |||||||     
T  21062471 tggttctaaccttaacactaattctaatcattgttctatgaatagtctaaggtctggacactatttctacatcaattcaacaggttcctacccttaatta 21062570  T
Q  203 atcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaag 302  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||| || |||||||||||||| ||| | |||||  ||||||||||| ||    
T  21062571 atcaattctccaacttttaacataattctcaaatcct-caaaactacaacctaccacttgttaaatccaattttcatagttataacacttagaattagag 21062669  T
Q  303 aaggttagtcccacccttacctt 325  Q
    || ||||||||||||||||||||    
T  21062670 aaagttagtcccacccttacctt 21062692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 41 - 325
Target Start/End: Complemental strand, 35811658 - 35811377
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcattgttcta 140  Q
    ||||||| |||| | |||||| ||||||||||| ||||||||| ||||||||   |  |  || |||||||||| |||||||||||||| | ||||||||    
T  35811658 ggcgagcaatgagtttcagctcgggcagaattgtagattttctcaaaactcaatcatcctcatggttctaacctcaaaactgattctaaactttgttcta 35811559  T
Q  141 tgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaacctaattcttaaatcctc 240  Q
    ||||||  ||||||| ||||||||| ||||||||||||||||| | ||  |  ||  || | ||||||||||||| |||||||||| |||| || ||||     
T  35811558 tgaatattctaaggtatggacactatttctacatcaatttaaccgtttattcttcacaaataatcaattctccaa-ttttaacctagttctcaactcct- 35811461  T
Q  241 caaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||| ||| || || ||| |||||| ||| ||| |||||||| ||||||||||| |||| ||||||||||||||||||||    
T  35811460 caaaactacctcccactacttgtcaaatcc-attttcaaaattataccacttagaattagagaaagttagtcccacccttacctt 35811377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 9870530 - 9870449
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctta 321  Q
    ||||||||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||    
T  9870530 ccaaaactacaacctacatcatgtcaaatccaattttcagaattatacaacttagaattatggaaagttagtcccaccctta 9870449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 9924120 - 9924205
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||| || |||||||| |||||||| ||||| |||||||||||| ||||||||||| |||| ||||||| ||||||||||||    
T  9924120 ccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtctcacccttacctt 9924205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 11425914 - 11425994
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  11425914 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 11425994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 15115193 - 15115273
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  15115193 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 15115273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 25091624 - 25091704
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  25091624 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 25091704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 53630555 - 53630475
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  53630555 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 53630475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 37019619 - 37019721
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| | ||| ||||||| ||||||||||||||||  ||||| |||||||||||||||||| ||||| |||| ||||||| |||||||    
T  37019619 aacctaattctcaaattc-ccataactacaacctacaacatgttaaactcaatt-tcagaattatacaacttaaaattagagaaagttagtcacaccctt 37019716  T
Q  321 acctt 325  Q
    |||||    
T  37019717 acctt 37019721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 40620510 - 40620598
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| |||||||||||||||| ||||||||| |  ||||||||||| |||| |||| ||||||||||||||| ||||||||| ||||    
T  40620510 cctacatcatgttaaatccaattttcagaattaaaatacttagaattagagaaagttattcccacccttaccttagtattgatgatcgg 40620598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 184
Target Start/End: Original strand, 50160819 - 50160998
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctcatcaaatccaat 103  Q
    |||||||||||||||||||||  || | |||| |  ||||||||||||||||||||| |||||||| |||| ||||||| ||||  ||| | ||||| ||    
T  50160819 ttcatcactcgcgaggcgagactagctgctcgctggggcgagcgatgaatgtcagctcgggcagaa-tgcaaattttctcaaaatttcacccaatcccat 50160917  T
Q  104 tgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaaca 184  Q
     |||||||||||| |||||||||||| |||  | ||||||||   |||||||||| |||    ||||||||||||| ||||    
T  50160918 ggttctaaccttagaactgattctaaacatcatcctatgaattatctaaggtctgtacatagtttctacatcaattcaaca 50160998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 325
Target Start/End: Complemental strand, 19434642 - 19434560
Alignment:
Q  242 aaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||| ||||| || ||||||||||| || ||||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  19434642 aaaactacaacctaccacctgttaaatccagtt-tcagaatcatacaacttagaattagagaaagttagtcccacccttacctt 19434560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 10356517 - 10356437
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  10356517 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccaaccttacctt 10356437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 40907725 - 40907818
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaacctt-aaaactgattctaatcat 133  Q
    |||||||||||||| |||||| |||||||||||||||||||| ||||| ||| | ||||  || ||| ||||||| ||||||||||||||||||    
T  40907725 ggcgagcgatgaatttcagctcgggcagaattgcagattttcataaaaatcacccaatctcatggttttaaccttaaaaactgattctaatcat 40907818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 42875768 - 42875848
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| | || ||||||||||||||||||||    
T  42875768 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattatataaagttagtcccacccttacctt 42875848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20942 - 21028
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa 88  Q
    ||||||||||||||||||||||||  ||  |||||| || ||||||||||||||||||||| || ||||| |||||||||||| ||||    
T  20942 gaagttcatcactcgcgaggcgaggacaactactcgctaaggcgagcgatgaatgtcagctcggacagaa-tgcagattttctcaaaa 21028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 325
Target Start/End: Original strand, 14549726 - 14549811
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||| ||||| || ||||||||||| || ||||||  |||||||||||||||| |||| ||||||| ||||||||||||    
T  14549726 tccaaaactacaacctaccacctgttaaatccagtt-tcagaaacatacaacttagaattagagaaagttagtctcacccttacctt 14549811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 27996525 - 27996710
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttct-taaaactcatcaaatccaat 103  Q
    |||||||||||||||||||||  || | |||| |  |||||||||||||||||| || || ||||| |||||||||||| ||||| ||| | ||||  ||    
T  27996525 ttcatcactcgcgaggcgagactagctgctcgctggggcgagcgatgaatgtcatctcggacagaa-tgcagattttctctaaaaatcacccaatctcat 27996623  T
Q  104 tgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttc 190  Q
      ||||||||||||||||||||| ||| ||  |  |||| ||   |||||||||| |||| | |||||||| |||||||||| ||||    
T  27996624 gtttctaaccttaaaactgattccaattatcctcatatggattatctaaggtctgtacacaatttctacattaatttaacagttttc 27996710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 221 - 322
Target Start/End: Complemental strand, 6633640 - 6633541
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| ||| | ||||||| ||||||||||| ||||   |||| ||||||||||||||| |||||||| |||| |||||||||||||||    
T  6633640 aacctaattctcaaattctc-ataactacaacctacaacatgctaaacttaatt-tcagaattatacaacgtagaattagagaaagttagtcccaccctt 6633543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 11478739 - 11478654
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||| ||  ||||||| |||||||| ||||| |||||||||||| ||||||||||| || | ||||||| ||||||||||||    
T  11478739 ccaaaacttcaatctacaacttgttaaattcaattttcagaattataccacttagaattagaggaagttagtctcacccttacctt 11478654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 15008940 - 15009029
Alignment:
Q  252 cctacaacatgttaaatccaattct-cagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| ||||||||||||| || | |||||||| |  ||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  15008940 cctacatcatgttaaatccagtttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgg 15009029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 19610295 - 19610375
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||| ||||| |||| ||||||| ||||||||||||    
T  19610295 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttaaaattagagaaagttagtctcacccttacctt 19610375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 19243540 - 19243650
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||| |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  19243540 acttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 19243638  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  19243639 cacccttacctt 19243650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 16998496 - 16998576
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| ||| |||||||||||||||||||| |||| ||||||| ||| ||||||||    
T  16998496 aactacaacctacaacatgctaaactcaatt-tcataattatacaacttagaattagagaaagttagtctcactcttacctt 16998576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 184
Target Start/End: Original strand, 19739471 - 19739651
Alignment:
Q  4 gttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttct-taaaactcatcaaatccaa 102  Q
    |||||||||||||||||||||   || | |||| |  ||||||||||||||||||||| |||||||| ||||||||||||  |||| ||| | ||||  |    
T  19739471 gttcatcactcgcgaggcgaggctagctgctcgctggggcgagcgatgaatgtcagctcgggcagaa-tgcagattttctccaaaaatcacccaatctca 19739569  T
Q  103 ttgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaaca 184  Q
    |  |||||| |||||||||||||| ||| ||  | || || ||  ||||||||||| ||||   ||||||||||||| ||||    
T  19739570 tgtttctaatcttaaaactgattccaattatcatcctgtggattacctaaggtctgtacacagtttctacatcaattcaaca 19739651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 129
Target Start/End: Complemental strand, 33661904 - 33661784
Alignment:
Q  9 tcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgtt 107  Q
    |||||||||||||||||  || ||||||    ||||||||||||||||| |   ||||||| |||||| |||||| |||| | || | ||||| ||||||    
T  33661904 tcactcgcgaggcgagacaagctactcgcggaggcgagcgatgaatgtctgtacgggcaga-ttgcagtttttctcaaaaattcacccaatcccattgtt 33661806  T
Q  108 ctaaccttaaaactgattctaa 129  Q
    ||||||||||||||||||||||    
T  33661805 ctaaccttaaaactgattctaa 33661784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 322
Target Start/End: Complemental strand, 46001634 - 46001535
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| ||| | ||||||| ||||||||||| ||||   |||| ||||||||||||||| |||||||| |||| ||||||| |||||||    
T  46001634 aacctaattctcaaattctc-ataactacaacctacaacatgctaaacttaatt-tcagaattatacaacgtagaattagagaaagttagtctcaccctt 46001537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 3485806 - 3485874
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||| |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  3485806 acttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 3485874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 322
Target Start/End: Complemental strand, 15011580 - 15011474
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||||||| ||||||| | ||||||||||||||||| ||||| ||||||||| |  |||||||||||  ||||| ||||||    
T  15011580 acttttaaccctaattcccaaatcctc-aaaactaaa-cctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcc 15011483  T
Q  314 cacccttac 322  Q
     ||||||||    
T  15011482 tacccttac 15011474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 50221663 - 50221595
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||| |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  50221663 acttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 50221595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 12033096 - 12032986
Alignment:
Q  215 acttttaacct-aattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    ||||||||||| |||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  12033096 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 12032998  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  12032997 cacccttacctt 12032986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 13591387 - 13591259
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttct--taaaactcatcaaatccaa 102  Q
    ||||||||||||||||||| |   | | |||| |||||||||||||||||||||||| |||||||| |||| |||||||  ||||| ||||| ||||  |    
T  13591387 ttcatcactcgcgaggcgaaaggtgctgctcgctatggcgagcgatgaatgtcagctcgggcagaa-tgcaaattttctcctaaaa-tcatccaatctca 13591290  T
Q  103 ttgttctaaccttaaaactgattctaatcat 133  Q
    |  |||||| |||||||| ||||| ||||||    
T  13591289 tgtttctaaacttaaaaccgattccaatcat 13591259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 15117677 - 15117567
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  15117677 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 15117579  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  15117578 cacccttacctt 15117567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 29268193 - 29268303
Alignment:
Q  215 acttttaacct-aattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    ||||||||||| |||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  29268193 acttttaaccttaattcccaaatactcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 29268291  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  29268292 cacccttacctt 29268303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 2424433 - 2424388
Alignment:
Q  280 aattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||||    
T  2424433 aattatacaacttagaattagagaaagttagtctcacccttacctt 2424388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 8711302 - 8711406
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgttctaaccttaaaactgattctaatcattgttct 139  Q
    |||||||||||||||||||   ||||||| |||||| |||||| |||| | || | ||||  || ||||||||||||||||||||||||| |||  ||||    
T  8711302 ggcgagcgatgaatgtcagtacgggcaga-ttgcagtttttctcaaaaattcacccaatctcatggttctaaccttaaaactgattctaaacatcattct 8711400  T
Q  140 atgaat 145  Q
    ||||||    
T  8711401 atgaat 8711406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 15365459 - 15365383
Alignment:
Q  6 tcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttct 83  Q
    |||||||||||||||||||   || | |||| |  ||||||||||||||||||||| |||||||||| ||||||||||    
T  15365459 tcatcactcgcgaggcgaggctagctgctcgctggggcgagcgatgaatgtcagctcgggcagaatt-cagattttct 15365383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 9870654 - 9870578
Alignment:
Q  116 aaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttcta 192  Q
    ||||||| ||||||||||||| |||||||||   ||||||||| |||||  |||| ||| |||| ||||||||||||    
T  9870654 aaaactggttctaatcattgtactatgaataatataaggtctgaacactgtttcttcattaattcaacaggtttcta 9870578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 14186961 - 14187024
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    ||||||| ||||| |||||||||| |||| |||| ||||||||||||||| ||||||||| ||||    
T  14186961 tcagaatcataca-cttagaattagagaaagttactcccacccttaccttagtattgatgatcgg 14187024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 15489579 - 15489508
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattata 286  Q
    |||||||||| ||||||| |||| ||| ||||||| | ||||||||||||||||| ||||| |||||||||||    
T  15489579 acttttaaccctaattctcaaattctcaaaaactaaa-cctacaacatgttaaatacaattttcagaattata 15489508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 281
Target Start/End: Original strand, 16043727 - 16043966
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaac-tcatcaaatccaattgttctaaccttaaaactgattctaatcattgttct 139  Q
    |||||||||||||| |||||| ||||||||||||| ||||||  ||||  ||| | ||||  || ||||||||||||||| ||||||  || ||  | ||    
T  16043727 ggcgagcgatgaatttcagctcgggcagaattgcatattttcacaaaaaatcacctaatcacatggttctaaccttaaaattgattcctataatcatcct 16043826  T
Q  140 atgaatagcctaaggtctggacactaattctacatcaatttaacaggtttcta-ctcttaattgatcaattctccaacttttaacc-taattcttaaatc 237  Q
    ||| ||   |||||||||| ||||   ||||||||||||| ||||| |||  | |  |||||  ||||||| ||  ||| |||||| ||||||| |||||    
T  16043827 atggattatctaaggtctgtacacattttctacatcaattcaacagtttttcatcaattaatc-atcaattatc--actcttaaccctaattctcaaatc 16043923  T
Q  238 ctccaaaactacatcctacaacatgttaaatccaattctcagaa 281  Q
    ||| ||||||| |||||| |||||||||||| ||||| ||||||    
T  16043924 ctcaaaaacta-atcctataacatgttaaatacaattttcagaa 16043966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 25031102 - 25031162
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaatt 274  Q
    |||||||||| ||||||| |||| ||| ||||||| | |||||||||||||||||||||||    
T  25031102 acttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaatt 25031162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 340
Target Start/End: Original strand, 10057680 - 10057727
Alignment:
Q  293 agaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||||  |||||||||||||||||||||||| ||||||||| ||||    
T  10057680 agaattattgaaggttagtcccacccttaccttagtattgatgatcgg 10057727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 44772408 - 44772298
Alignment:
Q  215 acttttaac-ctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    ||||||||| |||||||| |||| ||  ||||||| | |||||||||||| |||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  44772408 acttttaactctaattctcaaattctgaaaaactaaaacctacaacatgtaaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 44772310  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  44772309 cacccttacctt 44772298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 14852341 - 14852275
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaat 71  Q
    |||||| ||||||||||||||  || | ||||  | || ||||||||||||||||||||||||||||    
T  14852341 ttcatccctcgcgaggcgagacaagctgctcgcgagggtgagcgatgaatgtcagcttgggcagaat 14852275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15792425 - 15792505
Alignment:
Q  1 gaagttcatcactcgcgaggcgag-atcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttc 82  Q
    |||||||||||||| ||| ||||| |||| | |||||  | ||||||||||||||||||||| |||||||| |||||||||||    
T  15792425 gaagttcatcactcacgacgcgaggatca-tcactcgcgagggcgagcgatgaatgtcagctcgggcagaa-tgcagattttc 15792505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 18165733 - 18165671
Alignment:
Q  9 tcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaat 71  Q
    |||||||||||||||||  || ||||||  | ||||||||||||||||||||  |||||||||    
T  18165733 tcactcgcgaggcgagacgagctactcgccagggcgagcgatgaatgtcagcacgggcagaat 18165671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 325
Target Start/End: Complemental strand, 10694319 - 10694246
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||| ||||||||||| | || ||||||||| |  ||||||||||| ||||  |||||| ||||||||||||    
T  10694319 cctacatcatgttaaatcgagttttcagaattaaattacttagaattagagaaatttagtctcacccttacctt 10694246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 325
Target Start/End: Complemental strand, 10908085 - 10908012
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||| ||||||||||| | || ||||||||| |  ||||||||||| ||||  |||||| ||||||||||||    
T  10908085 cctacatcatgttaaatcgagttttcagaattaaattacttagaattagagaaatttagtctcacccttacctt 10908012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 12623338 - 12623367
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  12623338 attaaagaaggttagtcccacccttacctt 12623367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 13165154 - 13165183
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  13165154 attaaagaaggttagtcccacccttacctt 13165183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 50161065 - 50161114
Alignment:
Q  252 cctacaac-atgttaaatccaattctcagaattatacaacttagaattaa 300  Q
    |||||||| |||| |||| ||||| |||||||||||||||||||||||||    
T  50161065 cctacaaccatgtaaaattcaattttcagaattatacaacttagaattaa 50161114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 7640511 - 7640443
Alignment:
Q  215 acttttaacct-aattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    ||||||||||| |||||  |||| ||| ||||||| | ||||||||||||||||| ||||| |||||||    
T  7640511 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaat 7640443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 13882201 - 13882245
Alignment:
Q  85 aaaactcatcaaatccaattgttctaaccttaaaactgattctaa 129  Q
    |||| ||||| ||||| |||||||||||||||||| |||||||||    
T  13882201 aaaattcatccaatcccattgttctaaccttaaaattgattctaa 13882245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 14186067 - 14186103
Alignment:
Q  289 acttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||| |||| |||||||||||||||    
T  14186067 acttagaattaaagaaagttactcccacccttacctt 14186103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 14873410 - 14873342
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||  |||| ||| |||| || | ||||||||||||||||||||||| |||||||    
T  14873410 acttttaaccctaattcccaaattctcaaaaattaaaacctacaacatgttaaatccaattttcagaat 14873342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 18238937 - 18238877
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaatt 274  Q
    |||||||||| ||||||  |||| ||| ||||||| | |||||||||||||||||||||||    
T  18238937 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatt 18238877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 44616128 - 44616196
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| |||||||    
T  44616128 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaat 44616196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 4669 - 4991
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatcc 100  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||| ||||||| |||||||||| ||| |    
T  4669 gaagttcatccctcgcgaggcgagatcagttactcgctatggcgagcgatgaatgtcagctcgggcataattgcatattttctcaaaactcatccaattc 4768  T
Q  101 aattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaat 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4769 aatggttctaaccttaaaactgattctaatcattgttctatgaatagtctaaggtctggacactaattctacatcaatttaacaggtttctcctcttaat 4868  T
Q  201 tgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaa 300  Q
    ||||| ||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4869 tgatcgattatcc-acttttaacctaattcttaaatcct-caaaactacatcctacaacatgttaaatccaactctcagaattatacaacttagaattaa 4966  T
Q  301 agaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||||    
T  4967 agaaggttagtcccacccttacctt 4991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 25045847 - 25046169
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatcc 100  Q
    |||||||||| ||||||||||| |  ||| |||||| |||||| ||||||||||||||||| ||||||||||||| ||||||| |||||||| | ||| |    
T  25045847 gaagttcatctctcgcgaggcggggacagctactcgctatggcaagcgatgaatgtcagctcgggcagaattgcatattttctcaaaactcaaccaattc 25045946  T
Q  101 aattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaat 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25045947 aatggttctaaccttaaaactgattctaatcattgttctatgaatagtctaaggtctggacactaattctacaccaatttaacaggtttctactcttaat 25046046  T
Q  201 tgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaa 300  Q
    ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25046047 tgatcgattctcc-acttttaacctaattcttaaatcct-caaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaa 25046144  T
Q  301 agaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||||    
T  25046145 agaaggttagtcccacccttacctt 25046169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 5985905 - 5986228
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctcatcaaatc 99  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||| ||||||||||| |||| |||| | || |    
T  5985905 gaagttcatcactcgcgaggcgagatcagctactcgctatggcaagcgatgaatgtcagctcgggcagaat-gcagattttctcaaaaactcacccaaac 5986003  T
Q  100 caattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
      || ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  5986004 tcatggttctaaccttaaaactgattctaatcatggttctatgaataatctaaggtctggacactatttctacatcaattcaacaggttcctactcttaa 5986103  T
Q  200 ttgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatta 299  Q
    || ||||||||||||||||||||||||||||| ||||||| |||||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  5986104 ttaatcaattctccaacttttaacctaattctcaaatcct-caaaactataacctacaacttgttaaatccaattttcagaattatacaacttagaatta 5986202  T
Q  300 aagaaggttagtcccacccttacctt 325  Q
    ||||||||| ||||||||||||||||    
T  5986203 aagaaggttcgtcccacccttacctt 5986228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 14694054 - 14694377
Alignment:
Q  1 gaagttcatcactcgcgaggcgag-atcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatc 99  Q
    ||||||||||||||||||| || | |||| ||||| |  | ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |     
T  14694054 gaagttcatcactcgcgagacgcggatca-ttacttgccaaggcgagcgatgaatgtcagctcgggcagaattgcagattttctcaaaactcatctagtt 14694152  T
Q  100 caattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
    | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  14694153 ccatggttctaaccttaaaactgattctaatcattgttctatgaatagtctaaggtctggacactatttctacatcaattcaacaggtttctactcttaa 14694252  T
Q  200 ttgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatta 299  Q
    ||| |||||||||||||||| | ||||||||| |||| |||| |||||||| |||||| |||||||||||||||| ||| ||||| |  |||||||||||    
T  14694253 ttggtcaattctccaactttaaccctaattctcaaat-ctcccaaactacaacctacatcatgttaaatccaattttcaaaattaaattacttagaatta 14694351  T
Q  300 aagaaggttagtcccacccttacctt 325  Q
     |||| ||||||| ||||||||||||    
T  14694352 tagaaagttagtctcacccttacctt 14694377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 107 - 325
Target Start/End: Original strand, 25142038 - 25142255
Alignment:
Q  107 tctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatca 206  Q
    |||||||||||||||||||||||||||| |||||||||||  | ||||||||||||||| ||||||||||||||||||| || |||||||||||| | |     
T  25142038 tctaaccttaaaactgattctaatcattcttctatgaataatccaaggtctggacactatttctacatcaatttaacagattcctactcttaattcaacc 25142137  T
Q  207 attctccaactt-ttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaag 305  Q
    | | | |||||| | ||||||||||  |||| | ||||||||||| |||||||| |||||||| ||||| |||||||||||| ||||||||||| ||||     
T  25142138 aat-tacaacttctaaacctaattcccaaattc-ccaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaa 25142235  T
Q  306 gttagtcccacccttacctt 325  Q
    ||||||||||||||||||||    
T  25142236 gttagtcccacccttacctt 25142255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 8 - 325
Target Start/End: Original strand, 3539570 - 3539888
Alignment:
Q  8 atcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagctt---gggcagaattgcagattttcttaaaactcatcaaatccaatt 104  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||||||| |    ||||||||| |||| |||    |||||||| | ||| | ||     
T  3539570 atcactcgcgaggcgagaacagttacttgctatggcgagcgatgaatgtcagttctacgggcagaat-gcagttttgaacaaaactcacctaattccata 3539668  T
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgat 204  Q
      |||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||  |||||||||||| ||||  ||||||||||||| | |     
T  3539669 actctaactttaaaactgattctaatcattgttctatgaataacctaaggtttggacactatctctacatcaattcaacatatttctactcttaaatcaa 3539768  T
Q  205 caattctccaactt-ttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaaga 303  Q
    | | | | |||||| | ||||||||||| |||| | | ||||||||| |||||||| |||||||| | ||| |||||||||||| ||||| ||||| |||    
T  3539769 ccaat-tacaacttctaaacctaattctcaaattc-caaaaactacaacctacaacttgttaaattcgattttcagaattataccacttaaaattagaga 3539866  T
Q  304 aggttagtcccacccttacctt 325  Q
    | ||||||||||||||||||||    
T  3539867 aagttagtcccacccttacctt 3539888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 107 - 325
Target Start/End: Original strand, 27852501 - 27852719
Alignment:
Q  107 tctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatca 206  Q
    |||||||||||||||||||||||||| | |||||||||||  ||||||||||||||||| ||||||||||||| ||||| ||||||||||||| |   |     
T  27852501 tctaaccttaaaactgattctaatcaattttctatgaataatctaaggtctggacactatttctacatcaattcaacagatttctactcttaaatccacc 27852600  T
Q  207 attctccaactt-ttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaag 305  Q
    | ||| |||||| | || |||||||  |||| | ||||||| ||| |||||||| |||||||| ||||| |||||||||||| ||||||||||| ||||     
T  27852601 aatctacaacttctaaatctaattcccaaattc-ccaaaacaacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaa 27852699  T
Q  306 gttagtcccacccttacctt 325  Q
    ||||||||||||||||||||    
T  27852700 gttagtcccacccttacctt 27852719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 18390533 - 18390229
Alignment:
Q  8 atcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagctt---gggcagaattgcagattttcttaaaactcatcaaatccaatt 104  Q
    ||||||||||||||||||  || |||||| ||||||||||||||||||||||||    ||||||||| |||| |||    |||||| | | ||| | |      
T  18390533 atcactcgcgaggcgagaatagctactcgctatggcgagcgatgaatgtcagctctacgggcagaat-gcagttttcacaaaaactaacctaattccaca 18390435  T
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactctt-aattga 203  Q
      ||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||| ||||||||||||| ||||| || || ||||| |||| |    
T  18390434 actctaaccttaaaactgattctaatcattgttctatgaataatctaaagtctggacactatttctacatcaattcaacagattcctgctcttaaattaa 18390335  T
Q  204 tcaattctccaacttttaa-cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaag 302  Q
    |||| | |||||||| ||| ||||||||  |||| | ||||||||||| | ||| || |||||||| | ||| |||||||||||  ||||||||||| ||    
T  18390334 tcaact-tccaacttctaatcctaattcccaaattc-ccaaaactacaacatac-acttgttaaattctattttcagaattatatcacttagaattagag 18390238  T
Q  303 aaggttagt 311  Q
    || ||||||    
T  18390237 aaagttagt 18390229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 24793081 - 24792760
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttctt-aaaactcatcaaatc 99  Q
    |||||||||||||||||||||||   |   |||||| |||||||||||||| ||||||||| ||||||||| |||||||||||  |||| ||| | ||||    
T  24793081 gaagttcatcactcgcgaggcgaaggcttctactcgctatggcgagcgatggatgtcagctcgggcagaat-gcagattttctccaaaattcacccaatc 24792983  T
Q  100 caattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
      ||  ||||||| |||||||||||||  || ||  | ||||| ||   ||||||| || ||||   ||||||||||||| |||||||||||||||||||    
T  24792982 tcatgtttctaactttaaaactgattcctattatcatcctatggattatctaaggtttgtacacagtttctacatcaattcaacaggtttctactcttaa 24792883  T
Q  200 ttgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaa-catgttaaatccaattctcagaattatacaacttagaatt 298  Q
    ||||  |||||||||| ||| | ||||||||| ||||  || || ||| || ||||||| |||||||||| || || ||||||| | |  ||| ||||||    
T  24792882 ttgactaattctccaattttaaccctaattctcaaat--tctaagactccaacctacaaccatgttaaattcagtt-tcagaatcaca-tactcagaatt 24792787  T
Q  299 aaagaaggttagtcccacccttacctt 325  Q
    |  ||||||||||||||||||||||||    
T  24792786 attgaaggttagtcccacccttacctt 24792760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 325
Target Start/End: Original strand, 22259873 - 22260089
Alignment:
Q  107 tctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatca 206  Q
    ||||||| |||||||||||||||||||||| |||||||||  |||||||||| |||||| ||||||||||||| ||||  ||||||||  ||| | | ||    
T  22259873 tctaaccctaaaactgattctaatcattgtactatgaataatctaaggtctgaacactatttctacatcaattcaacatatttctactactaaatcaaca 22259972  T
Q  207 attctccaacttttaa-cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaag 305  Q
    |   | |||||| ||| ||||||||  ||||  ||| |||||||| |||||||| |||||||| ||||| ||||||| || | |||||||||||  |||     
T  22259973 aaattacaacttctaagcctaattcccaaat--tcctaaactacaacctacaacctgttaaattcaattttcagaatcatgc-acttagaattagtgaaa 22260069  T
Q  306 gttagtcccacccttacctt 325  Q
    ||||||| ||| ||||||||    
T  22260070 gttagtcacactcttacctt 22260089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 341
Target Start/End: Original strand, 40912291 - 40912387
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcggt 341  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| |||||    
T  40912291 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggt 40912387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 242 - 325
Target Start/End: Original strand, 22501939 - 22502022
Alignment:
Q  242 aaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||| || |||||||||||||||||||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||    
T  22501939 aaaactacaacccacaacatgttaaatccaattctcagaattaaattacttagaattagagaaagttagtcccacccttacctt 22502022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 242 - 325
Target Start/End: Original strand, 22509873 - 22509956
Alignment:
Q  242 aaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||| || |||||||||||||||||||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||    
T  22509873 aaaactacaacccacaacatgttaaatccaattctcagaattaaattacttagaattagagaaagttagtcccacccttacctt 22509956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 24834345 - 24834024
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttctt-aaaactcatcaaatc 99  Q
    |||||||||||||||||||||||   |   |||||| |||||||| ||||||||||||||| || |||||| |||||||||||  |||| ||| | ||||    
T  24834345 gaagttcatcactcgcgaggcgaaggcttctactcgctatggcgatcgatgaatgtcagctcggtcagaat-gcagattttctccaaaattcacccaatc 24834247  T
Q  100 caattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
      ||  ||||||| |||||||||||||  || ||  | ||||| ||   |||||||||| ||||   ||||||||||||| |||| ||||||||| ||||    
T  24834246 tcatgtttctaactttaaaactgattcctattatcatcctatggattatctaaggtctgtacacagtttctacatcaattcaacatgtttctacttttaa 24834147  T
Q  200 ttgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaa-catgttaaatccaattctcagaattatacaacttagaatt 298  Q
    ||||  |||||||||| ||| | ||||||| | ||||  || |||||| || ||||||| |||||||||| ||||| || |||| | |  ||| ||||||    
T  24834146 ttgactaattctccaattttaaccctaattatcaaat--tctaaaactccaacctacaaccatgttaaattcaatt-tcggaatcaca-tactcagaatt 24834051  T
Q  299 aaagaaggttagtcccacccttacctt 325  Q
    |  || |||||||||||||||||||||    
T  24834050 attgatggttagtcccacccttacctt 24834024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 242 - 340
Target Start/End: Original strand, 357850 - 357947
Alignment:
Q  242 aaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    ||||||||| ||||| || ||||||||||| || ||||||| |||||||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  357850 aaaactacaacctaccacctgttaaatccagtt-tcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgg 357947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 24516157 - 24516237
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  24516157 aactacaacctacaacatgttaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 24516237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 107 - 325
Target Start/End: Original strand, 44072392 - 44072608
Alignment:
Q  107 tctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatca 206  Q
    |||||||  ||||||||||||||||||||| ||||||||   |||||||||| |||||| ||||||||||||| ||||| |||||||| |||| | | |     
T  44072392 tctaaccccaaaactgattctaatcattgtactatgaatcatctaaggtctgaacactatttctacatcaattcaacagatttctactattaaattaacc 44072491  T
Q  207 attctccaacttttaac-ctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaag 305  Q
    |   | |||||| |||| ||||||   |||| | ||||||||||| |||||||| || ||||| ||||| ||| ||| |||| |||||||||||  |||     
T  44072492 aaaat-caacttctaacgctaatttccaaattc-ccaaaactacaacctacaacttgctaaattcaattttcaaaatcatac-acttagaattagtgaaa 44072588  T
Q  306 gttagtcccacccttacctt 325  Q
    ||||||| ||||||||||||    
T  44072589 gttagtctcacccttacctt 44072608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 5031210 - 5031130
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  5031210 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 5031130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 17307457 - 17307537
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  17307457 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 17307537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 247 - 325
Target Start/End: Complemental strand, 2523825 - 2523748
Alignment:
Q  247 tacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| ||||||||||||||||  ||||| | |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  2523825 tacaacctacaacatgttaaactcaatt-taagaattatacaacttagaattagagaaagttagtcccacccttacctt 2523748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 21081041 - 21080955
Alignment:
Q  254 tacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||| ||||||||||||| || ||||||||| |  ||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  21081041 tacatcatgttaaatccagttttcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgg 21080955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 1383629 - 1383545
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacct 324  Q
    |||||||||||| ||||| || ||||||||||| || ||||||| |||||||||||||||| |||| ||||||| |||||||||||    
T  1383629 tccaaaactacaacctaccacctgttaaatccagtt-tcagaatgatacaacttagaattagagaaagttagtctcacccttacct 1383545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 9975900 - 9975980
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  9975900 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtccaacccttacctt 9975980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 252 - 335
Target Start/End: Original strand, 25184167 - 25184250
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatg 335  Q
    |||||||||||||||||| | || ||||||||| |  ||||||||||| |||| ||||||| |||||||||||| |||||||||    
T  25184167 cctacaacatgttaaatctagttttcagaattaaaatacttagaattagagaaagttagtctcacccttaccttagtattgatg 25184250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 322
Target Start/End: Original strand, 37270670 - 37270747
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    ||||||| ||||||||||| ||||  ||||| ||||||||||||||| |||||||| |||| |||||||||||||||||    
T  37270670 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacgtagaattagagaaagttagtcccacccttac 37270747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 321
Target Start/End: Complemental strand, 19201281 - 19201205
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctta 321  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||    
T  19201281 aactacaacctacaacatgataaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcaccctta 19201205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 321
Target Start/End: Original strand, 24436619 - 24436695
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctta 321  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||  |||| ||||||||||||||||    
T  24436619 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattcgagaaagttagtcccaccctta 24436695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 24780890 - 24780841
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  24780890 tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 24780841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 21915602 - 21915690
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| ||||||| ||||||||| || ||||||||| ||||    
T  21915602 cctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcacacccttactttagtattgatgatcgg 21915690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 23375657 - 23375811
Alignment:
Q  9 tcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgtt 107  Q
    |||||||||| ||||||  || |||||| |  |||||||||||||||||||  | |||||| |||||| |||||| |||| | || | ||||| || |||    
T  23375657 tcactcgcgacgcgagacaagctactcgctgaggcgagcgatgaatgtcagtataggcaga-ttgcagtttttctcaaaaattcacccaatcccatggtt 23375755  T
Q  108 ctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacac 163  Q
    |||||||||||||||||||||| ||||   ||||||||   |||||||||| ||||    
T  23375756 ctaaccttaaaactgattctaaacattaacctatgaatcttctaaggtctgtacac 23375811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 18388275 - 18388191
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| |||||||| |||||||||||||| ||||||| |||  ||| || ||||  ||||||||||| ||||||||||||    
T  18388275 ccaaaactacaacctacaacttgttaaatccaattttcagaatcata-tactcaggattattgaaggttagtctcacccttacctt 18388191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 22251529 - 22251449
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| ||||  |||||  ||||||||||||    
T  22251529 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaaattagtttcacccttacctt 22251449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 325
Target Start/End: Complemental strand, 23068481 - 23068408
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||| ||||| ||||||||| |  |||||||||||  ||||| ||||| ||||||||||||    
T  23068481 cctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtctcacccttacctt 23068408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 18809780 - 18809890
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  18809780 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 18809878  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  18809879 cacccttacctt 18809890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 23711338 - 23711228
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  23711338 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 23711240  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  23711239 cacccttacctt 23711228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 32038822 - 32038712
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  32038822 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 32038724  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  32038723 cacccttacctt 32038712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 18358041 - 18357975
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccc 318  Q
    |||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| |||||||||||||    
T  18358041 cctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccaccc 18357975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 19358858 - 19358942
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| || ||||| |||||||| ||||| ||||||| |||  ||| |||||||   |||||||||||||||||||||||    
T  19358858 ccaaaactacaacccacaacttgttaaattcaattttcagaatcata-tactcagaattattaaaggttagtcccacccttacctt 19358942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 23131718 - 23131809
Alignment:
Q  233 aaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||||||||||||||    
T  23131718 aaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcccacccttacctt 23131809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 23134185 - 23134276
Alignment:
Q  233 aaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||||||||||||||    
T  23134185 aaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcccacccttacctt 23134276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 28577942 - 28578010
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  28577942 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 28578010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 34401828 - 34401737
Alignment:
Q  233 aaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||||||||||||||    
T  34401828 aaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcccacccttacctt 34401737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 22690585 - 22690644
Alignment:
Q  223 cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    ||||||||  |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  22690585 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 22690644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 26506216 - 26506326
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | |||||||||||||||||||||||  |||||||| |  |||||  ||||  ||| |||||||     
T  26506216 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttccagaatta-atgacttaagattattgaatgttagtct 26506314  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  26506315 cacccttacctt 26506326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 27920089 - 27919979
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | |||||||||||||||||||||||  |||||||| |  |||||  ||||  ||| |||||||     
T  27920089 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttccagaatta-atgacttaagattattgaatgttagtct 27919991  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  27919990 cacccttacctt 27919979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 39683153 - 39683263
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  39683153 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaattcaattttcagaatca-atgacttaagattattgaatgttagtcc 39683251  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  39683252 cacccttacctt 39683263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 23968653 - 23968615
Alignment:
Q  296 attaaagaaggttagtcccacccttacctttgtattgat 334  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  23968653 attaaagaaggttagtctcacccttacctttggattgat 23968615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 24897520 - 24897411
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| |||  ||| |  ||||  ||| ||||||||    
T  24897520 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcata-gactcaagattattgaatgttagtcc 24897422  T
Q  314 cacccttacct 324  Q
    |||||||||||    
T  24897421 cacccttacct 24897411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 24900003 - 24899894
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| |||  ||| |  ||||  ||| ||||||||    
T  24900003 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcata-gactcaagattattgaatgttagtcc 24899905  T
Q  314 cacccttacct 324  Q
    |||||||||||    
T  24899904 cacccttacct 24899894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 24902480 - 24902371
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| |||  ||| |  ||||  ||| ||||||||    
T  24902480 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcata-gactcaagattattgaatgttagtcc 24902382  T
Q  314 cacccttacct 324  Q
    |||||||||||    
T  24902381 cacccttacct 24902371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 24904957 - 24904848
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| |||  ||| |  ||||  ||| ||||||||    
T  24904957 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcata-gactcaagattattgaatgttagtcc 24904859  T
Q  314 cacccttacct 324  Q
    |||||||||||    
T  24904858 cacccttacct 24904848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 324
Target Start/End: Complemental strand, 24907432 - 24907323
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| |||  ||| |  ||||  ||| ||||||||    
T  24907432 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcata-gactcaagattattgaatgttagtcc 24907334  T
Q  314 cacccttacct 324  Q
    |||||||||||    
T  24907333 cacccttacct 24907323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 34858216 - 34858178
Alignment:
Q  302 gaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  34858216 gaaggttagtcccacccttaccttagtattgatgatcgg 34858178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Complemental strand, 34873278 - 34873240
Alignment:
Q  302 gaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  34873278 gaaggttagtcccacccttaccttagtattgatgatcgg 34873240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 12626476 - 12626428
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||| ||||  ||||| ||||||||||||||||||||||||    
T  12626476 tcagaattataca-cttatgattaatgaaggttagtcccacccttacctt 12626428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 14179758 - 14179729
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  14179758 attaaagaaggttagtcccacccttacctt 14179729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 14183496 - 14183467
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  14183496 attaaagaaggttagtcccacccttacctt 14183467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 325
Target Start/End: Original strand, 24682205 - 24682277
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||| ||||| ||||||| |||  |||||  ||||  ||| ||||||||||||||||||||    
T  24682205 cctacaacatgttaaatacaattttcagaatcata-gacttaagattattgaatgttagtcccacccttacctt 24682277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 25141937 - 25141990
Alignment:
Q  8 atcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagct 61  Q
    |||||||||||||||||| ||  |||||| |||||| || ||||||||||||||    
T  25141937 atcactcgcgaggcgagaacaactactcgctatggcaagtgatgaatgtcagct 25141990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 45535947 - 45535976
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  45535947 attaaagaaggttagtcccacccttacctt 45535976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 572235 - 572295
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaatt 274  Q
    |||||||||| ||||||  |||| ||| ||||||| | |||||||||||||||||||||||    
T  572235 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatt 572295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 23136405 - 23136473
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||  |||| ||| ||||| | | ||||||||||||||||||||||| |||||||    
T  23136405 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaat 23136473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 26508694 - 26508754
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaatt 274  Q
    |||||||||| ||||||  |||| ||| ||||||| | |||||||||||||||||||||||    
T  26508694 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatt 26508754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 43946604 - 43946561
Alignment:
Q  238 ctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    ||||||||||| |||||||||||||||||||| |||| |||||||    
T  43946604 ctccaaaacta-atcctacaacatgttaaatctaattatcagaat 43946561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 9 - 325
Target Start/End: Original strand, 398298 - 398613
Alignment:
Q  9 tcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttc 108  Q
    |||||||||||||||||  || |||| | |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| ||||   ||    
T  398298 tcactcgcgaggcgagacaagctacttgctatggcgagcgatgaatgtcagctcgggcagaattgcagattttctcaaaactcatccaattcaatgactc 398397  T
Q  109 taaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaat 208  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  398398 taaccttaaaactgattctaatcatcgttctatgaatagtctaaggtttggacactaattctacatcaatttaataggttcctactcttaattgatcaat 398497  T
Q  209 tctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggtt 308  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  398498 tctccaacttttaacctaattcttaaatcct-caaaactacatcctacaacatgttaaatccaattctcagaattatacaacctagaattaaagaaggtt 398596  T
Q  309 agtcccacccttacctt 325  Q
    |||||||||||||||||    
T  398597 agtcccacccttacctt 398613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 5 - 325
Target Start/End: Original strand, 10953822 - 10954140
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaatt 104  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||| ||||     
T  10953822 ttcatccctcgcgaggcgatatcagttactcgctatggcgagcgatgaatgtcagctcgggcagaattgtagattttctcaaaactcatccaattcaatg 10953921  T
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgat 204  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  10953922 gttctaaccttaaaactgattctaatcattgttctatgaatagtctaaggtctggacactatttctacatcaatttaacaagtttctactcttaattgac 10954021  T
Q  205 caattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaa 304  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||    
T  10954022 caatcctcaaacttttaacctaattcttaaat-ctccaaaactacatcctacaacatgttaaatccaatt-tcataattacacaacttagaattaaggaa 10954119  T
Q  305 ggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||    
T  10954120 ggttagtcccacccttacctt 10954140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 25250151 - 25249829
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctcatc-aaat 98  Q
    ||||||||||||| ||||||||||  ||| | |||| |||||||||||||||||||||||| |||||||||  ||| |||||| |||| |||| | ||||    
T  25250151 gaagttcatcacttgcgaggcgaggacagctgctcgctatggcgagcgatgaatgtcagctcgggcagaata-caggttttctcaaaaactcacccaaat 25250053  T
Q  99 ccaattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactctta 198  Q
    ||| | || |||||||||||||||||| || || ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  25250052 cca-tggtcctaaccttaaaactgattatagtcgttgttctatgaatagtctaaggtctggacactatttctacatcaatttaacaggttcctactctta 25249954  T
Q  199 attgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatt 298  Q
    ||| |||||||||||||||||||||||||||| | |||||| |||||||| | ||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  25249953 attaatcaattctccaacttttaacctaattc-tcaatcct-caaaactataacctacaacatgttaaatccaattttcagaattatataacttaaaatt 25249856  T
Q  299 aaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||| |||||||||||    
T  25249855 aaagaaggttagtcctacccttacctt 25249829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 25313935 - 25313613
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctcatc-aaat 98  Q
    ||||||||||||| ||||||||||  ||| | |||| |||||||||||||||||||||||| |||||||||  ||| |||||| |||| |||| | ||||    
T  25313935 gaagttcatcacttgcgaggcgaggacagctgctcgctatggcgagcgatgaatgtcagctcgggcagaata-caggttttctcaaaaactcacccaaat 25313837  T
Q  99 ccaattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactctta 198  Q
    ||| | || |||||||||||||||||| || || ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  25313836 cca-tggtcctaaccttaaaactgattatagtcgttgttctatgaatagtctaaggtctggacactatttctacatcaatttaacaggttcctactctta 25313738  T
Q  199 attgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatt 298  Q
    ||| |||||||||||||||||||||||||||| | |||||| |||||||| | ||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  25313737 attaatcaattctccaacttttaacctaattc-tcaatcct-caaaactataacctacaacatgttaaatccaattttcagaattatataacttaaaatt 25313640  T
Q  299 aaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||| |||||||||||    
T  25313639 aaagaaggttagtcctacccttacctt 25313613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 20469383 - 20469177
Alignment:
Q  118 aactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaact 217  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| |||||  | |||||||||||| ||||||| |||||||    
T  20469383 aactgattctaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaacagagtcctactcttaattaatcaattttccaact 20469284  T
Q  218 tttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacc 317  Q
    || ||||||||||| || ||| ||||||||||| |||||||| |||||||||||||| ||||| |||||  ||||||||||| |||| ||||||||||||    
T  20469283 ttaaacctaattctcaagtcc-ccaaaactacaacctacaacttgttaaatccaattttcagagttatatcacttagaattagagaaagttagtcccacc 20469185  T
Q  318 cttacctt 325  Q
    ||||||||    
T  20469184 cttacctt 20469177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 21618244 - 21617929
Alignment:
Q  8 atcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagctt---gggcagaattgcagattttcttaaaactcatcaaatccaatt 104  Q
    |||||||||||||||||| ||| |||||| ||| |||||||||||||||  |||    ||||||||| |||||||| |  |||||||| | ||| | ||     
T  21618244 atcactcgcgaggcgagaacagctactcgctatagcgagcgatgaatgttggctctacgggcagaat-gcagattt-cacaaaactcacctaattccata 21618147  T
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa-ttga 203  Q
      ||||||||||||| |||||||||||||||| |||||||||  ||||||| |||||||||  |||||||||||| ||||  || ||||||| || || |    
T  21618146 actctaaccttaaaattgattctaatcattgtgctatgaataatctaaggtttggacacta--tctacatcaattcaacatattcctactctcaaattaa 21618049  T
Q  204 tcaattctccaacttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaag 302  Q
    ||||||   |||||| ||||| ||||||| |||| | ||||||||||| |||||||| |||||||| ||||| | ||| |||||  ||||||||||| ||    
T  21618048 tcaattt--caacttctaaccctaattctcaaattc-ccaaaactacaacctacaacttgttaaattcaatttttagagttatatcacttagaattagag 21617952  T
Q  303 aaggttagtcccacccttacctt 325  Q
    || ||||||||||||||||||||    
T  21617951 aaagttagtcccacccttacctt 21617929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 105 - 340
Target Start/End: Original strand, 30616447 - 30616680
Alignment:
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgat 204  Q
    |||||||| | |||||||||||||| ||||||||||||||||   ||||||||||||||||  ||||||||||| |||| | ||  |  |||||||| ||    
T  30616447 gttctaacatcaaaactgattctaaacattgttctatgaatattataaggtctggacactatctctacatcaatctaaccgattattcatcttaattaat 30616546  T
Q  205 caattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaa 304  Q
    |||||||||| |||||||||||||||| |||  || |||||  |  |||  | || |||||||||| ||| ||||||| |||||||||||||||| ||||    
T  30616547 caattctccatcttttaacctaattctcaaactct-caaaatcatctccctctacttgttaaatcc-attttcagaatcatacaacttagaattagagaa 30616644  T
Q  305 ggttagtcccacccttacctttgtattgatggtcgg 340  Q
     || ||||||||||||||| |  |||||||| ||||    
T  30616645 agtcagtcccacccttaccataatattgatgatcgg 30616680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 17011706 - 17011794
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  17011706 cctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgg 17011794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 340
Target Start/End: Complemental strand, 10774747 - 10774650
Alignment:
Q  241 caaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    ||||||||||  ||||| |||||||||| ||||| ||||||| ||||| ||||||||||  |||||||||||||||||||||||| ||||||||| ||||    
T  10774747 caaaactacaatctaca-catgttaaattcaattttcagaatcataca-cttagaattagtgaaggttagtcccacccttaccttagtattgatgatcgg 10774650  T

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Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 36508719 - 36508634
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||| ||||| || ||||||||||| || ||||||| |||||||||||||||| |||| ||||||| ||||||||||||    
T  36508719 tccaaaactacaacctaccacctgttaaatccattt-tcagaatcatacaacttagaattagagaaagttagtctcacccttacctt 36508634  T

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Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 7484951 - 7485050
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| ||| | ||||||| ||||||||||| ||||  ||||| ||||||||||||||| |||||||| |||| |||||||||||||||    
T  7484951 aacctaattctcaaattctc-ataactacaacctacaacatgctaaactcaatt-tcagaattatacaacgtagaattagagaaagttagtcccaccctt 7485048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 325
Target Start/End: Original strand, 266016 - 266089
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| ||||||||||||||||||||    
T  266016 cctacatcatgttaaatccagttttcagaattaaattacttagaattagagaaagttagtcccacccttacctt 266089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 20566517 - 20566597
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| ||||||||||||||||| |||||| |||| ||||||| ||||||||||||    
T  20566517 aactacaacctacaacatgctaaactcaatt-tcagaattatacaactttgaattagagaaagttagtctcacccttacctt 20566597  T

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Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 325
Target Start/End: Complemental strand, 21300147 - 21300045
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| | ||| ||||||  ||||||||||| ||||   |||| |||||||||||||||||| ||||| |||| |||||||||||||||    
T  21300147 aacctaattctcaaattc-ccataactactacctacaacatgctaaacttaatt-tcagaattatacaacttaaaattagagaaagttagtcccaccctt 21300050  T
Q  321 acctt 325  Q
    |||||    
T  21300049 acctt 21300045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 29448818 - 29448909
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcggtgg 343  Q
    |||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| ||||||| || | ||||||| ||||||||| |||||||    
T  29448818 cctacatcatgttaaatccagttttcagaattaaattacttagaattagagaaagttagtctcatcattaccttagtattgatgatcggtgg 29448909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 6551340 - 6551291
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  6551340 tcagaattatacaacttagaattagagaaagttagtctcacccttacctt 6551291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 316
Target Start/End: Original strand, 19921612 - 19921680
Alignment:
Q  247 tacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccac 316  Q
    |||| ||||||||||||||||  ||||| |||||||||||||||||||||||| |||| | |||||||||    
T  19921612 tacaacctacaacatgttaaactcaatt-tcagaattatacaacttagaattagagaaaggtagtcccac 19921680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 340
Target Start/End: Original strand, 31456926 - 31457026
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtc 338  Q
    |||||||||||| |||||    ||||||||||| || ||||||| |||| ||||| ||||| |||| ||||||| |||||||||||| ||||||||| ||    
T  31456926 tccaaaactacaacctaccttgtgttaaatccagtt-tcagaatcataccacttaaaattagagaaagttagtctcacccttaccttagtattgatgatc 31457024  T
Q  339 gg 340  Q
    ||    
T  31457025 gg 31457026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 253 - 325
Target Start/End: Complemental strand, 21914564 - 21914493
Alignment:
Q  253 ctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| |||||||||||||| ||||||||| | | || |||||||  ||||||||||||||||||||||||    
T  21914564 ctacaacttgttaaatccaattttcagaattacata-ctcagaattattgaaggttagtcccacccttacctt 21914493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 38620273 - 38620341
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||| |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  38620273 acttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 38620341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 39245982 - 39246083
Alignment:
Q  223 cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    ||||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| |||||||||||||||||    
T  39245982 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcccacccttac 39246080  T
Q  323 ctt 325  Q
    |||    
T  39246081 ctt 39246083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 325
Target Start/End: Original strand, 23065381 - 23065463
Alignment:
Q  242 aaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||||||||||||||    
T  23065381 aaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcccacccttacctt 23065463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 29346818 - 29346928
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||| | | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  29346818 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 29346916  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  29346917 cacccttacctt 29346928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 29349291 - 29349401
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||| | | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  29349291 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 29349389  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  29349390 cacccttacctt 29349401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 29351764 - 29351874
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||| | | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  29351764 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 29351862  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  29351863 cacccttacctt 29351874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 284
Target Start/End: Complemental strand, 41094925 - 41094859
Alignment:
Q  217 ttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaatta 284  Q
    |||||||||||||||  ||| ||| ||||||| | ||||||||||||||||| ||||| |||||||||    
T  41094925 ttttaacctaattctccaattctcaaaaactaaa-cctacaacatgttaaatacaattatcagaatta 41094859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 42244687 - 42244577
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||| |||| ||| ||||| | | |||||||||| |||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  42244687 acttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatattaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 42244589  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  42244588 cacccttacctt 42244577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 21554336 - 21554294
Alignment:
Q  293 agaattaaagaaggttagtcccacccttacctttgtattgatg 335  Q
    |||||||  |||||||||||||||||||||||| |||||||||    
T  21554336 agaattactgaaggttagtcccacccttaccttagtattgatg 21554294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 325
Target Start/End: Original strand, 31622099 - 31622168
Alignment:
Q  255 acaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||| ||||  ||||| ||||||||||||||| || ||||| |||| |||| |||||||||||||||    
T  31622099 acaacatgctaaactcaatt-tcagaattatacaacctaaaattagagaaagttaatcccacccttacctt 31622168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 14025837 - 14025808
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  14025837 attaaagaaggttagtcccacccttacctt 14025808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 14048931 - 14048999
Alignment:
Q  215 acttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaatta 284  Q
    |||||||||||||||||  |||  || ||||||| | ||||||||||||||||| ||||| |||||||||    
T  14048931 acttttaacctaattctccaattttcaaaaactaaa-cctacaacatgttaaatacaattatcagaatta 14048999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 21405713 - 21405629
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| || ||||| |||||||| ||||| ||||||| |||  ||| |||||||   |||||||||| ||||||||||||    
T  21405713 ccaaaactacaacccacaacctgttaaattcaattttcagaatcata-tactcagaattattaaaggttagtctcacccttacctt 21405629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 26762424 - 26762453
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  26762424 attaaagaaggttagtcccacccttacctt 26762453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 26832636 - 26832685
Alignment:
Q  289 acttagaattaaagaaggttagtcccacccttacctttgtattgatggtc 338  Q
    |||||||||||  |||||||| ||||||||||||| | ||||||||||||    
T  26832636 acttagaattattgaaggttactcccacccttaccgtagtattgatggtc 26832685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 39364240 - 39364289
Alignment:
Q  233 aaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  39364240 aaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 39364289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 264093 - 264025
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||| ||||  || ||||| | | ||||||||||||||||||||||| |||||||    
T  264093 acttttaaccctaattctcaaattttcaaaaacgaaaacctacaacatgttaaatccaattttcagaat 264025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 225; Significance: 1e-124; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 24550491 - 24550169
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatcc 100  Q
    ||||||||||||||||||||||||||||  | |||| |||||||||||||||||| ||||| |||||||| |||||||||||| |||||||||| ||| |    
T  24550491 gaagttcatcactcgcgaggcgagatcatctgctcgctatggcgagcgatgaatgacagctcgggcagaagtgcagattttctcaaaactcatccaattc 24550392  T
Q  101 aattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaat 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| || |||||||||||||||||||| ||||| ||||    
T  24550391 aatggttctaaccttaaaactgattctaatcattgttctatgaatagtctaaggtcttgacactatttttacatcaatttaacaggtttatactcctaat 24550292  T
Q  201 tgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaa 300  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  24550291 tgaccaattctccaacttttaacctaattcttaaat-ctccaaaactacatcctacaacatgttaaatccaatt-tcagaattacacaacttacaattaa 24550194  T
Q  301 agaaggttagtcccacccttacctt 325  Q
    ||||| |||||||||||||||||||    
T  24550193 agaagtttagtcccacccttacctt 24550169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 6 - 325
Target Start/End: Complemental strand, 31732224 - 31731905
Alignment:
Q  6 tcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagatttt-cttaaaactcatcaaatccaatt 104  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||||| |||| |||  |  |||||||| | ||| | |      
T  31732224 tcatcactcgcgaggcgagagcagctactcgctatggcgagcgatgaatgtcagctcgggcagaat-gcagttttcaccaaaaactcacctaattccaca 31732126  T
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgat 204  Q
      ||||||| |||||||||| ||||||||||||||||||||   ||||||||||||||||| ||||||||||||| ||||  || |||||||||||| ||    
T  31732125 actctaaccataaaactgatactaatcattgttctatgaatgatctaaggtctggacactatttctacatcaattcaacatattcctactcttaattaat 31732026  T
Q  205 caattctccaactttt-aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaaga 303  Q
    ||||| |||||||||| ||||||||||| |||||| ||||||||||| |||||||| ||| |||||||||| |||||||||||  ||||||||||  |||    
T  31732025 caattttccaacttttaaacctaattctcaaatcc-ccaaaactacaacctacaacttgtcaaatccaattttcagaattataacacttagaattggaga 31731927  T
Q  304 aggttagtcccacccttacctt 325  Q
    | ||||||||||||||||||||    
T  31731926 aagttagtcccacccttacctt 31731905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 107 - 325
Target Start/End: Original strand, 23501506 - 23501723
Alignment:
Q  107 tctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatca 206  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||| || || |||||||| |||| | | ||    
T  23501506 tctaaccttaaaactgattctaatcattgttatatgaataatctaaggtctggacactatttctacatcaattcaatagatttctacttttaaatcaaca 23501605  T
Q  207 attctccaactt-ttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaag 305  Q
    | | | |||||| | ||||||||||  ||||   | ||||||||| |||||||| |||||||| || || ||||||||| || | |||||||||  ||||    
T  23501606 aat-tacaacttctaaacctaattcccaaatttccaaaaactacaacctacaacttgttaaattcagttttcagaattaaac-atttagaattattgaag 23501703  T
Q  306 gttagtcccacccttacctt 325  Q
    ||||||| ||||||||||||    
T  23501704 gttagtctcacccttacctt 23501723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 12041688 - 12041621
Alignment:
Q  258 acatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12041688 acatgttaaatccaattttcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 12041621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 241 - 325
Target Start/End: Complemental strand, 15890796 - 15890713
Alignment:
Q  241 caaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  15890796 caaaactacaacctacaacatgttaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 15890713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 19401043 - 19401145
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| | ||||||||||| |||||||| |||||||| ||||| ||||||| |||| |||||||||||  |||||||||||||||||||    
T  19401043 aacctaattctcaaattc-ccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtgaaggttagtcccaccctt 19401140  T
Q  321 acctt 325  Q
    |||||    
T  19401141 acctt 19401145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 24267820 - 24267902
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttg 327  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  24267820 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctttg 24267902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 323
Target Start/End: Original strand, 18585754 - 18585854
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    |||||||||| |||||  |||||||||||| ||||| || ||||||||||| || ||||||| |||||||||||||||| |||| |||||||||||||||    
T  18585754 aacctaattcctaaatt-tccaaaactacaacctaccacctgttaaatccagtt-tcagaatcatacaacttagaattagagaaagttagtcccaccctt 18585851  T
Q  321 acc 323  Q
    |||    
T  18585852 acc 18585854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 7827943 - 7828023
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  7827943 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 7828023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 18928647 - 18928732
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||| || |||||||| |||||||| ||||| |||||||||||| ||||||||||| |||| |||||||| |||||||||||    
T  18928647 ccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtcctacccttacctt 18928732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 19655312 - 19655232
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  19655312 aactacaacctacaacatgttaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcacccttacctt 19655232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 23150368 - 23150288
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  23150368 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 23150288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 340
Target Start/End: Complemental strand, 27330062 - 27329967
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||||| |||||||| |||| ||||||| ||| |||||||| ||||||||| ||||    
T  27330062 aactacaacctacaacatgttaaactcaatt-tcagaattatacaacctagaattagagaaagttagtcacactcttaccttagtattgatgatcgg 27329967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 340
Target Start/End: Complemental strand, 27390802 - 27390707
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||||| |||||||| |||| ||||||| ||| |||||||| ||||||||| ||||    
T  27390802 aactacaacctacaacatgttaaactcaatt-tcagaattatacaacctagaattagagaaagttagtcacactcttaccttagtattgatgatcgg 27390707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 9621821 - 9621732
Alignment:
Q  44 gagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    ||||||||||| |||||| ||||||||  |||||||||| ||||| ||| | ||||| || |||||| ||||||||||||||||||||||    
T  9621821 gagcgatgaatctcagctcgggcagaaacgcagattttcataaaaatcacccaatcccatggttctatccttaaaactgattctaatcat 9621732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 25739094 - 25739183
Alignment:
Q  44 gagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    ||||||||||| |||||| ||||||||| |||||||||| ||||| |||   ||||| |  |||||||||||||||||||||||||||||    
T  25739094 gagcgatgaatttcagctcgggcagaatcgcagattttcataaaaatcactcaatcccaaggttctaaccttaaaactgattctaatcat 25739183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 19772776 - 19772667
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||||||| ||||||| | ||||||||||||||||| ||||| ||||||||| |  |||||||||||  ||||| ||||||    
T  19772776 acttttaaccctaattcccaaatcctc-aaaactaaa-cctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcc 19772679  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  19772678 cacccttacctt 19772667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 18703539 - 18703619
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||  ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  18703539 aactacaacctacaacattctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacacttacctt 18703619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 18709474 - 18709554
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||  ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  18709474 aactacaacctacaacattctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacacttacctt 18709554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 23527582 - 23527497
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattc 126  Q
    |||||||||||||| |||||| | ||||||||||||||||||  |||| ||| | ||||  || ||||||||||||||||||||||    
T  23527582 ggcgagcgatgaatttcagctcgcgcagaattgcagattttcacaaaaatcacctaatcacatggttctaaccttaaaactgattc 23527497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 22376118 - 22375997
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttct--taaaactcatcaaatccaa 102  Q
    |||||||||||||||||||||  |  | || |||  |||| |||||||||||||||| |||||||| ||||||||||||  ||||| ||||| ||||  |    
T  22376118 ttcatcactcgcgaggcgagactaactgcttgttggggcgcgcgatgaatgtcagctcgggcagaa-tgcagattttctcctaaaa-tcatccaatctca 22376021  T
Q  103 ttgttctaaccttaaaactgattc 126  Q
    || |||||||||||||||||||||    
T  22376020 tttttctaaccttaaaactgattc 22375997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 27572188 - 27572123
Alignment:
Q  259 catgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||| ||||| |||||||||||| ||||||||||| |||| ||||||| ||||||||||||    
T  27572188 catgttaaattcaatt-tcagaattatacgacttagaattagagaaagttagtctcacccttacctt 27572123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 340
Target Start/End: Complemental strand, 15173516 - 15173439
Alignment:
Q  263 ttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    ||||||||| || ||||||||| |  ||||||||||| |||| |||||||||||| ||||||| ||||||||| ||||    
T  15173516 ttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccaccattaccttagtattgatgatcgg 15173439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 15900728 - 15900647
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattga 333  Q
    |||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| ||| ||| |||||||||||| |||||||    
T  15900728 cctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttggtctcacccttaccttagtattga 15900647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 15998891 - 15998940
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  15998891 tcagaattatacaacttagaattagagaaagttagtctcacccttacctt 15998940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 325
Target Start/End: Original strand, 22806717 - 22806790
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||  |||| ||||||||| |  |||||||||||  ||||| ||||||||||||||||||    
T  22806717 cctacaacatgttaaatataattttcagaattaaaacacttagaattattgaaggctagtcccacccttacctt 22806790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 325
Target Start/End: Original strand, 28948563 - 28948626
Alignment:
Q  261 tgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| || ||||||| |||||||||||||||| |||| ||||||| ||||||||||||    
T  28948563 tgttaaatccagtt-tcagaatcatacaacttagaattagagaaagttagtctcacccttacctt 28948626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 12743157 - 12743267
Alignment:
Q  215 acttttaacct-aattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    ||||||||||| |||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  12743157 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 12743255  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  12743256 cacccttacctt 12743267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 18333917 - 18333807
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  18333917 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 18333819  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  18333818 cacccttacctt 18333807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 19858247 - 19858137
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||| |||| ||| ||||||| | |||||||||| |||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  19858247 acttttaaccctaattctcaaattctcaaaaactaaaacctacaacatcttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 19858149  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  19858148 cacccttacctt 19858137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 24423384 - 24423494
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  24423384 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 24423482  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  24423483 cacccttacctt 24423494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 33862634 - 33862744
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||| |||| ||| ||||| | | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  33862634 acttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 33862732  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  33862733 cacccttacctt 33862744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 33865115 - 33865225
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  33865115 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 33865213  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  33865214 cacccttacctt 33865225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 18343037 - 18343138
Alignment:
Q  223 cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    ||||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| |||||||||||||||||    
T  18343037 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcccacccttac 18343135  T
Q  323 ctt 325  Q
    |||    
T  18343136 ctt 18343138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 20177839 - 20177901
Alignment:
Q  116 aaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaat 178  Q
    ||||||| ||||||||||||| |||||||||  |||||||||| |||||  ||||||||||||    
T  20177839 aaaactggttctaatcattgtactatgaataatctaaggtctgaacactgtttctacatcaat 20177901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 22158152 - 22158090
Alignment:
Q  116 aaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaat 178  Q
    ||||||| ||||||||||||| |||||||||  |||||||||| |||||  ||||||||||||    
T  22158152 aaaactggttctaatcattgtactatgaataatctaaggtctgaacactgtttctacatcaat 22158090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 23992970 - 23993070
Alignment:
Q  223 cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    ||||||||| |||| ||| ||||||| | ||||||||||||||||| ||||| |||||||||||  ||| |  ||||  ||| |||||||||||||||||    
T  23992970 cctaattctcaaattctcaaaaactaaa-cctacaacatgttaaatacaattttcagaattata-gactcaagattattgaatgttagtcccacccttac 23993067  T
Q  323 ctt 325  Q
    |||    
T  23993068 ctt 23993070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 325
Target Start/End: Complemental strand, 15704638 - 15704565
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||| ||||| || |||| | |  |||||||||||  ||||| ||||||||||||||||||    
T  15704638 cctacaacatgttaaatacaattttcggaatgaaaacacttagaattattgaaggctagtcccacccttacctt 15704565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 27125558 - 27125478
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| |||   ||||| | ||| |||||||||||||||||| |||| ||||||| ||||||||||||    
T  27125558 aactacaacctacaacatgctaatctcaatttt-agacttatacaacttagaattagagaaagttagtctcacccttacctt 27125478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 22783065 - 22783175
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| |||  ||| |  ||||  ||| ||||||||    
T  22783065 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcata-gactcaagattattgaatgttagtcc 22783163  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  22783164 cacccttacctt 22783175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 26923770 - 26923660
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  26923770 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaattcaattttcagaatca-atgacttaagattattgaatgttagtcc 26923672  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  26923671 cacccttacctt 26923660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 134
Target Start/End: Original strand, 18453902 - 18453991
Alignment:
Q  45 agcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgttctaaccttaaaactgattctaatcatt 134  Q
    |||||||||| |||||| ||||||||| |||| |||||  |||| | |||||||||  || ||||||| ||||||||||||||||| ||||    
T  18453902 agcgatgaatttcagctcgggcagaat-gcagtttttcacaaaaatgcatcaaatcacatggttctaagcttaaaactgattctaaacatt 18453991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 27852221 - 27852267
Alignment:
Q  289 acttagaattaaagaaggttagtcccacccttacctttgtattgatg 335  Q
    ||||||||| |  |||||||||||||||||||||||| |||||||||    
T  27852221 acttagaatgattgaaggttagtcccacccttaccttagtattgatg 27852267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 13612322 - 13612390
Alignment:
Q  215 acttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaatta 284  Q
    |||||||||||||||||  |||  || ||||||| | ||||||||||||||||| ||||| |||||||||    
T  13612322 acttttaacctaattctccaattatcaaaaactaaa-cctacaacatgttaaatacaattatcagaatta 13612390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 23527401 - 23527341
Alignment:
Q  223 cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaatta 284  Q
    ||||||||| |||||||| ||||||| |||||| ||||||||||||| |||  |||||||||    
T  23527401 cctaattctcaaatcctcaaaaacta-atcctataacatgttaaatctaatcatcagaatta 23527341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 23620505 - 23620417
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgttctaaccttaaaactgattctaa 129  Q
    ||||||||||||||||| |   ||||||| |||||| |||||| |||| | || | ||||  ||||||||||||||||||||||||||||    
T  23620505 ggcgagcgatgaatgtctgtacgggcaga-ttgcagtttttctcaaaaattcacccaatctcattgttctaaccttaaaactgattctaa 23620417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 31734729 - 31734758
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  31734729 attaaagaaggttagtcccacccttacctt 31734758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 1540236 - 1540176
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaatt 274  Q
    |||||||||| ||||||  |||| ||| ||||||| | |||||||||||||||||||||||    
T  1540236 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatt 1540176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 2290503 - 2290435
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| |||||||    
T  2290503 acttttaaccctaattcccaaattctcaaaaactaaaccctacaacatgttaaattcaattttcagaat 2290435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 29625191 - 29625231
Alignment:
Q  282 ttatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    ||||||||| |||||||| |||| |||||||||||||||||    
T  29625191 ttatacaacgtagaattagagaaagttagtcccacccttac 29625231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 221; Significance: 1e-121; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 36704895 - 36704572
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatcc 100  Q
    |||||||||| ||||||||||||||||   | |||| | |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| |    
T  36704895 gaagttcatccctcgcgaggcgagatcgtctgctcgctgtggcgagcgatgaatgtcagctcgggcagaattgcagattttctcaaaactcatccaattc 36704796  T
Q  101 aattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaat 200  Q
    ||| |||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36704795 aatggttctaaccttaaaactgatcctaatcattgttctatgaaaagtctaaggtctggacactaattctacaacaatttaacaggtttctactcttaat 36704696  T
Q  201 tgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaa 300  Q
    ||||||||  ||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||| |||| ||||||||| |||||||| ||||||    
T  36704695 tgatcaatcttccaacttttatcctaattctcaaatcctccaaaactacatcttacaacatgttaaatcaaatt-tcagaattacacaacttaaaattaa 36704597  T
Q  301 agaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||||    
T  36704596 agaaggttagtcccacccttacctt 36704572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 10659173 - 10658852
Alignment:
Q  3 agttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctcatcaaatcca 101  Q
    |||||||| |||||||||||||   || |||||| |||||||||||||||||||||| | ||||||||| ||| ||||||| |||| |||||| ||| |     
T  10659173 agttcatccctcgcgaggcgagggtagctactcgctatggcgagcgatgaatgtcagttcgggcagaat-gcatattttctcaaaaactcatccaattcc 10659075  T
Q  102 attgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaatt 201  Q
    || |||| |||||||||||| ||| | ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10659074 atggttcaaaccttaaaactaattatgatcattgttctatgaatagtctaaggtctgaacactaattctacatcaatttaacaggtttctactcttaatt 10658975  T
Q  202 gatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaa 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  10658974 gatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaaaatgttaaatccaatt-tcagaatcatacaacttagaattaaa 10658876  T
Q  302 gaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||    
T  10658875 gaaggttagtcccacccttacctt 10658852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 9 - 325
Target Start/End: Original strand, 15288840 - 15289156
Alignment:
Q  9 tcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctcatcaaatccaattgtt 107  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||||||||||||  |||||||| |||| |||||| |||| |||| | ||| | || |||    
T  15288840 tcactcgcgaggcgagatcaattactcgctatggtgagcgatgaatgtcagctcaggcagaat-gcagtttttctcaaaaactcacccaattccatggtt 15288938  T
Q  108 ctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaa 207  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| |||||||| |||||||||||| |||||    
T  15288939 ctaaccttaaaactgattctaatcattgttctatgaatattctaaggtctggacactatttctacatcaattcaacaggttcctactcttaattaatcaa 15289038  T
Q  208 ttctccaactttt-aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaagg 306  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||| |||||||| |||||||||||||| ||||| |||||  ||||||||||| |||| |    
T  15289039 ttctccaacttttaaacctaattctcaaatcct-caaaactacaacctacaacttgttaaatccaattttcagagttataatacttagaattagagaaag 15289137  T
Q  307 ttagtcccacccttacctt 325  Q
    || ||||||||||||||||    
T  15289138 ttggtcccacccttacctt 15289156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 8 - 325
Target Start/End: Original strand, 4071553 - 4071871
Alignment:
Q  8 atcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagctt---gggcagaattgcagattttcttaaaactcatcaaatccaatt 104  Q
    |||||||||||||||||  ||| |||||| ||||||||||||||||||||||||    ||||||| | |||| ||||   |||||||| | ||| | ||     
T  4071553 atcactcgcgaggcgaggacagctactcgctatggcgagcgatgaatgtcagctctacgggcagagt-gcagttttttcaaaaactcacctaattccatg 4071651  T
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgat 204  Q
     |||||||||||||| |||||| |||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||| || |||||||||||| ||    
T  4071652 attctaaccttaaaattgattccaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaacagattcctactcttaattaat 4071751  T
Q  205 caattctccaactt-ttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaaga 303  Q
    ||||| |||||||| | ||||||||||| |||||| ||||||||||| |||||||| |||||||||||||| ||||| |||||  ||||||||||| |||    
T  4071752 caatt-tccaacttctaaacctaattctcaaatcc-ccaaaactacaacctacaacttgttaaatccaattttcagagttatatcacttagaattagaga 4071849  T
Q  304 aggttagtcccacccttacctt 325  Q
    | ||||||||||||||||||||    
T  4071850 aagttagtcccacccttacctt 4071871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 14219215 - 14218896
Alignment:
Q  8 atcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagctt---gggcagaattgcagattttcttaaaactcatcaaatccaatt 104  Q
    ||||| || |||| |||| |||||||||| ||||||||||||||||||||||||    ||||||||| | || ||| |  |||| ||| | ||| | ||     
T  14219215 atcacccgtgaggtgagagcagttactcgctatggcgagcgatgaatgtcagctctacgggcagaat-gaagttttcccaaaaattcacctaattccata 14219117  T
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactctt-aattga 203  Q
      ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||| ||||||||||| |||| |    
T  14219116 actctaaccttaaaactgattctaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaacagatttctactcttaaattaa 14219017  T
Q  204 tcaattctccaactt-ttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaag 302  Q
    |||||| |||||||| | ||||||||||  |||| || |||||||||| |||||||| |||||||| ||||| |||||||||||| ||||||||||| ||    
T  14219016 tcaatt-tccaacttctaaacctaattccaaaattct-caaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagag 14218919  T
Q  303 aaggttagtcccacccttacctt 325  Q
    || ||||||| ||||||||||||    
T  14218918 aaagttagtctcacccttacctt 14218896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 48807644 - 48807326
Alignment:
Q  8 atcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagctt---gggcagaattgcagattttcttaaaactcatcaaatccaatt 104  Q
    |||||||||||||||||  |||||||||| |||||||||||||||||||||| |    ||||||||| |||| |||    |||||||| | ||| | ||     
T  48807644 atcactcgcgaggcgaggacagttactcgctatggcgagcgatgaatgtcagttctacgggcagaat-gcagttttcaacaaaactcacctaattccata 48807546  T
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgat 204  Q
      |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||| ||||| ||||||||||||| | |     
T  48807545 actctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctggatactatttctacatcaattcaacagatttctactcttaaatcaa 48807446  T
Q  205 caattctccaactt-ttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaaga 303  Q
    | | | | |||||| |  ||| |||||  |||| | |||||||||||  ||||||| |||||||| | ||| |||||||||||| ||||||||||| |||    
T  48807445 ccaat-tacaacttctgtaccaaattcccaaattc-ccaaaactacaatctacaacttgttaaattcgattttcagaattataccacttagaattagaga 48807348  T
Q  304 aggttagtcccacccttacctt 325  Q
    | ||||||||||||||||||||    
T  48807347 aagttagtcccacccttacctt 48807326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 108 - 325
Target Start/End: Original strand, 16078167 - 16078381
Alignment:
Q  108 ctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaa 207  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||||||| ||||| ||||||||||||| | | | |    
T  16078167 ctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctgaacactatttctgcatcaattcaacagatttctactcttaaatcaacca 16078266  T
Q  208 ttctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggt 307  Q
     | ||||| || ||  |||||||  |||| | |||||||||||  ||||||| |||||||| | ||| ||| |||||||| ||||||||||| |||| ||    
T  16078267 atttccaatttcta--ctaattcccaaattc-ccaaaactacaaactacaacttgttaaattcgattttcataattataccacttagaattagagaaagt 16078363  T
Q  308 tagtcccacccttacctt 325  Q
    ||||||||||||||||||    
T  16078364 tagtcccacccttacctt 16078381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 107 - 325
Target Start/End: Complemental strand, 35771660 - 35771442
Alignment:
Q  107 tctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa-ttgatc 205  Q
    ||||||||||||||||||||||||  ||||||||||||||   ||||||| |||||||| |||||| |||||| ||||  || |||||||||| || |||    
T  35771660 tctaaccttaaaactgattctaatgtttgttctatgaataatttaaggtcaggacactatttctacgtcaattcaacatattcctactcttaaattaatc 35771561  T
Q  206 aattctccaacttttaa-cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaa 304  Q
    |||| |||||||| ||| ||||||||  ||||  |||||||||||| |||||||| |||||||| | ||| |||||||||||  ||||||||||| ||||    
T  35771560 aatt-tccaacttctaaacctaattcccaaatt-tccaaaactacaacctacaacttgttaaattcgattttcagaattatatcacttagaattagagaa 35771463  T
Q  305 ggttagtcccacccttacctt 325  Q
     ||||||||||||||||||||    
T  35771462 agttagtcccacccttacctt 35771442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 325
Target Start/End: Complemental strand, 15095851 - 15095638
Alignment:
Q  110 aaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaatt 209  Q
    |||| |||||||||||||||||||||| |||||||||  | |||||||| |||||  ||||||||||||| ||||| |||||||| |||| | | | | |    
T  15095851 aaccctaaaactgattctaatcattgtactatgaataatcaaaggtctgaacactgtttctacatcaattcaacagatttctactattaaatcaactaat 15095752  T
Q  210 ctccaacttttaa-cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggtt 308  Q
     | |||||| ||| ||||||||  |||| | ||||||||||| |||||||| |||||||| ||||| ||||||| ||||| ||||||||||  |||||||    
T  15095751 -tacaacttctaaacctaattcccaaattc-ccaaaactacaacctacaacctgttaaattcaattttcagaatcataca-cttagaattagtgaaggtt 15095655  T
Q  309 agtcccacccttacctt 325  Q
    |||||||||||||||||    
T  15095654 agtcccacccttacctt 15095638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 13132636 - 13132446
Alignment:
Q  11 actcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagctt---gggcagaattgcagattttcttaaaactcatcaaatccaattgtt 107  Q
    ||||||||||||||| |||||||||| |||||||||||| |||||||||||    ||||||||| |||| |||    |||||||| | ||| | |    |    
T  13132636 actcgcgaggcgagaacagttactcgctatggcgagcgacgaatgtcagctctacgggcagaat-gcagttttcacaaaaactcacctaattctacaact 13132538  T
Q  108 ctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
    ||||||||||||||||||||||||||||||| |||||||  ||| ||| ||||||||  ||||||||||||| ||||| |||||||||||||    
T  13132537 ctaaccttaaaactgattctaatcattgttcaatgaataatctacggtatggacactgtttctacatcaattcaacagatttctactcttaa 13132446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 107 - 325
Target Start/End: Original strand, 15140048 - 15140264
Alignment:
Q  107 tctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatca 206  Q
    ||||||| |||||||||||||||| ||||| ||| |||||  |||||||||| ||| |  |||||||||| || ||||| |||||||| |||| | | |     
T  15140048 tctaaccctaaaactgattctaattattgtactaagaataatctaaggtctgaacagtgtttctacatcagttcaacagatttctactattaaatcaacc 15140147  T
Q  207 attctccaacttttaa-cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaag 305  Q
    | | | |||||||||| ||||||||  |||| | ||||||||||| |||||||| |||||||| ||||| ||||||| |||| |||||||||||  ||||    
T  15140148 aat-tacaacttttaaacctaattcccaaattc-ccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtgaag 15140244  T
Q  306 gttagtcccacccttacctt 325  Q
    ||||||| ||||| ||||||    
T  15140245 gttagtctcacccatacctt 15140264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 12127249 - 12127164
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| ||||| | ||||||||||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  12127249 tccataactaaaacctacaacatgttaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 12127164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 13698725 - 13698639
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||| |||| ||||||| |||||||||| |||||||||  ||||||| |||||||||| |||||||| |||||||||||    
T  13698725 tccaaaactacaacctaaaacatgtcaaatccaattttcagaattaatcaacttaaaattaaagaaagttagtcctacccttacctt 13698639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 8851240 - 8851160
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  8851240 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 8851160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 12465341 - 12465261
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  12465341 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 12465261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 20586323 - 20586403
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  20586323 aactacaacctacaacatggtaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 20586403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 12372223 - 12372325
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| | ||| ||||||| ||| ||||||| ||||  ||||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  12372223 aacctaattctcaaattc-ccataactacaacctgcaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccaccctt 12372320  T
Q  321 acctt 325  Q
    |||||    
T  12372321 acctt 12372325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 253 - 325
Target Start/End: Complemental strand, 14928362 - 14928290
Alignment:
Q  253 ctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||| ||||| ||||||||| | ||||||||||||  ||||||||||||||||||||||||    
T  14928362 ctacaacatgttaaatacaattttcagaattaaagaacttagaattactgaaggttagtcccacccttacctt 14928290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 253 - 325
Target Start/End: Complemental strand, 15351828 - 15351756
Alignment:
Q  253 ctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||| ||||| ||||||||| | ||||||||||||  ||||||||||||||||||||||||    
T  15351828 ctacaacatgttaaatacaattttcagaattaaagaacttagaattactgaaggttagtcccacccttacctt 15351756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 249
Target Start/End: Complemental strand, 18074849 - 18074712
Alignment:
Q  110 aaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaatt 209  Q
    |||||||||||| ||||||| | |||||||| |||||| |||||||| ||| |||| ||||||||||||||||| | ||  |  ||| |||| |||||||    
T  18074849 aaccttaaaactaattctaaactttgttctacgaatagtctaaggtcaggatactatttctacatcaatttaaccgtttagtcttctcaattaatcaatt 18074750  T
Q  210 ctccaacttttaacctaattcttaaatcctccaaaactac 249  Q
    |||||| |||||||||| |||| || |||| |||||||||    
T  18074749 ctccaa-ttttaacctagttctcaactcct-caaaactac 18074712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 335
Target Start/End: Complemental strand, 29052256 - 29052173
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatg 335  Q
    |||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| |||||||||||||||||||| |||||||||    
T  29052256 cctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatg 29052173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 12323016 - 12322931
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  12323016 tccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagttccacccttacctt 12322931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 239 - 325
Target Start/End: Original strand, 20620252 - 20620337
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  20620252 tccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacacttacctt 20620337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 47974906 - 47974821
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||| ||||| || ||||||||||| || ||||||| |||||||||||||||| |||| ||||||| ||||||||||||    
T  47974906 tccaaaactacaacctaccacctgttaaatccagtt-tcagaatcatacaacttagaattagagaaagttagtctcacccttacctt 47974821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 11067439 - 11067519
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  11067439 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcacccttacctt 11067519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 13147553 - 13147473
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| ||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  13147553 aactacaacctacaacatgctaaactcaatt-tcagaattatataacttagaattagagaaagttagtcccacccttacctt 13147473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 32433670 - 32433590
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  32433670 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcacccttacctt 32433590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 13893216 - 13893308
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    |||||||||||||| | |||| ||||| ||| |||||||||| ||||| |||   ||||| || |||||||||||||||||||||||||||||    
T  13893216 ggcgagcgatgaatcttagctcgggcaaaatcgcagattttcataaaaatcactcaatcccatggttctaaccttaaaactgattctaatcat 13893308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 340
Target Start/End: Complemental strand, 16550079 - 16549991
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| |||||||||| ||||||||| ||||||||| ||||    
T  16550079 cctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccaaccttaccttagtattgatgatcgg 16549991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 16615583 - 16615671
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| |||||||||| ||||||||| ||||||||| ||||    
T  16615583 cctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccaaccttaccttagtattgatgatcgg 16615671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 33002133 - 33002204
Alignment:
Q  253 ctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||| |||| |||||||| |||||||||||    
T  33002133 ctacaacctgttaaatccaatt-tcagaatcatacaacttagaattagagaaagttagtccgacccttacctt 33002204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 46386191 - 46386093
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| | ||| ||||||| |||||||||| |||||  ||||| |||||||||||||||||||||||| |||| |||||||| ||||||    
T  46386191 aacctaattctcaaattc-ccataactacaacctacaacatattaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcctaccctt 46386094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 10277276 - 10277375
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| ||| | ||||||| ||||||||||| ||||   |||| ||||||||||||||| |||||||| |||| |||||||||||||||    
T  10277276 aacctaattctcaaattctc-ataactacaacctacaacatgctaaacttaatt-tcagaattatacaacgtagaattagagaaagttagtcccaccctt 10277373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 20214118 - 20214198
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||| ||||||  |||| ||||||||||||||||||||    
T  20214118 aactacaacctacaacatgctaaactcaatt-tcagaattatacaactcagaatttgagaaagttagtcccacccttacctt 20214198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 325
Target Start/End: Complemental strand, 8135451 - 8135239
Alignment:
Q  110 aaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaatt 209  Q
    |||| ||||||||||| ||| ||||   |||||||||  ||| |||||| |||||||||||||||||||| ||||  |||  ||| |||| | | | | |    
T  8135451 aaccctaaaactgattataaacattacactatgaataatctagggtctgaacactaattctacatcaattcaacatattttcactattaaatcaaccaat 8135352  T
Q  210 ctccaacttttaa-cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggtt 308  Q
     | |||||| ||| ||||||||| |||| | | ||||||||| |||||||| |||||||| ||||| ||||||| ||||| ||||| ||||  |||||||    
T  8135351 -tacaacttctaaacctaattctcaaattc-ctaaaactacaacctacaacctgttaaattcaatt-tcagaatcataca-cttaggattagtgaaggtt 8135256  T
Q  309 agtcccacccttacctt 325  Q
    |||| ||||||||||||    
T  8135255 agtctcacccttacctt 8135239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 325
Target Start/End: Complemental strand, 12754692 - 12754613
Alignment:
Q  245 actacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||| ||||| || ||||||||||| || ||||||| ||| |||||||||||| |||| ||||||||||||||||||||    
T  12754692 actacaacctaccacctgttaaatccagtt-tcagaatcatataacttagaattagagaaagttagtcccacccttacctt 12754613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 14259373 - 14259445
Alignment:
Q  253 ctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||| ||||| ||||||||| |  |||||||||||  ||||| ||||||||||||||||||    
T  14259373 ctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacctt 14259445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 30820235 - 30820137
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcg 339  Q
    ||||||||||| |||||||| ||||||||||| || ||||||||| | | || |||||||  |||||||||||||||||| ||||| ||||||||| |||    
T  30820235 ccaaaactacaacctacaacctgttaaatccagtt-tcagaattacata-ctcagaattactgaaggttagtcccaccctcaccttagtattgatgatcg 30820138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 15202940 - 15203033
Alignment:
Q  33 ctcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttct-taaaactcatcaaatccaattgttctaaccttaaaactgattc 126  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||||||||  |||| ||| | ||||  ||  |||||||||||||||||||||    
T  15202940 ctcgctatggcgagcgatgaatgtcagctcgggcagaa-tgcagattttctccaaaaatcacccaatctcatgtttctaaccttaaaactgattc 15203033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 4690713 - 4690664
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  4690713 tcagaattatacaacttagaattagagaaagttagtcccacctttacctt 4690664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 11054680 - 11054764
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||| |||| |||||||| |||||||| ||||| ||||||| | ||| |||||||| |  ||||||||||||||||||||||||    
T  11054680 ccaaaattacaacctacaacctgttaaattcaattttcagaatcaaaca-cttagaatcattgaaggttagtcccacccttacctt 11054764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 14180479 - 14180399
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||| ||| ||||  ||||| |||||||||||||||||||||||| ||||  |||||| ||||||||||||    
T  14180479 aactacaacctacaatatgctaaactcaatt-tcagaattatacaacttagaattagagaaaattagtcacacccttacctt 14180399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 15623968 - 15624069
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| | |||||||||||  ||||||| | |||||| ||||| ||||||| ||||| ||||||||||  ||||||||||| |||||||    
T  15623968 aacctaattctcaaattc-ccaaaactacaaactacaacctattaaattcaatt-tcagaatcataca-cttagaattattgaaggttagtctcaccctt 15624064  T
Q  321 acctt 325  Q
    |||||    
T  15624065 acctt 15624069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 32302168 - 32302278
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattct-cagaattatacaacttagaattaaagaaggttagtc 312  Q
    |||||||||| ||||||  |||||||| ||||||| | ||||||||||||||||| ||||| | |||||||| |  |||||||||||  ||||| |||||    
T  32302168 acttttaaccctaattcccaaatcctc-aaaactaaa-cctacaacatgttaaatacaatttttcagaattaaaacacttagaattattgaaggctagtc 32302265  T
Q  313 ccacccttacctt 325  Q
    |||||||||||||    
T  32302266 ccacccttacctt 32302278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 36685231 - 36685137
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatg 335  Q
    |||||||||||| |||||||| ||||||||||| || ||||||||| |  ||| |||||||  ||||||| || ||||||||||||| |||||||||    
T  36685231 tccaaaactacaacctacaacctgttaaatccagtt-tcagaattaca-tactcagaattattgaaggttggttccacccttaccttagtattgatg 36685137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 457160 - 457270
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  457160 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 457258  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  457259 cacccttacctt 457270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 9725120 - 9724992
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttct--taaaactcatcaaatccaa 102  Q
    ||||||||||||||||||| |   | | |||| |||||||||||||||||||||||| |||||||| |||| |||||||  ||||| ||||| ||||  |    
T  9725120 ttcatcactcgcgaggcgaaaggtgctgctcgctatggcgagcgatgaatgtcagctcgggcagaa-tgcaaattttctcctaaaa-tcatccaatctca 9725023  T
Q  103 ttgttctaaccttaaaactgattctaatcat 133  Q
    |  |||||| |||||||| ||||| ||||||    
T  9725022 tgtttctaaacttaaaaccgattccaatcat 9724992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 15376038 - 15375928
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  15376038 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 15375940  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  15375939 cacccttacctt 15375928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 16410897 - 16411007
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  16410897 acttttaaccctaattccaaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 16410995  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  16410996 cacccttacctt 16411007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 18431550 - 18431660
Alignment:
Q  215 acttttaac-ctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    ||||||||| |||||||| |||| ||| ||||||| | |||||||||||| |||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  18431550 acttttaactctaattctcaaattctcaaaaactaaaacctacaacatgtaaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 18431648  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  18431649 cacccttacctt 18431660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 20384448 - 20384338
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  20384448 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 20384350  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  20384349 cacccttacctt 20384338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 8469283 - 8469383
Alignment:
Q  223 cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    ||||||||| |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| |||  ||| | |||||  ||| |||||||||||||||||    
T  8469283 cctaattctcaaattctcaaaaactaaa-cctacaacatgttaaatacaattttcagaatcata-gactcaaaattattgaatgttagtcccacccttac 8469380  T
Q  323 ctt 325  Q
    |||    
T  8469381 ctt 8469383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 325
Target Start/End: Complemental strand, 24270017 - 24269948
Alignment:
Q  255 acaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||| ||||  ||||| |||||||||||||||||| ||||| |||| |||| |||||||||||||||    
T  24270017 acaacatgctaaactcaatt-tcagaattatacaacttaaaattagagaaagttaatcccacccttacctt 24269948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 321
Target Start/End: Original strand, 12557888 - 12557968
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctta 321  Q
    ||||||||||| |||||||| |||||||| ||||| | ||||| |||| |||||||||||  ||||||||||| ||| ||||    
T  12557888 ccaaaactacaacctacaacctgttaaattcaatttttagaatcatac-acttagaattagtgaaggttagtctcactctta 12557968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 16573983 - 16574103
Alignment:
Q  9 tcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgtt 107  Q
    |||||||||||||||||  || |||||| |  |||||||||||||| ||||   ||||||| |||||| ||| || |||| | || | ||||| || |||    
T  16573983 tcactcgcgaggcgagacaagctactcgctgaggcgagcgatgaatatcagtaagggcaga-ttgcagttttcctaaaaaattcacccaatcccatggtt 16574081  T
Q  108 ctaaccttaaaactgattctaa 129  Q
    ||||||||||||||||||||||    
T  16574082 ctaaccttaaaactgattctaa 16574103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 129
Target Start/End: Complemental strand, 16591679 - 16591559
Alignment:
Q  9 tcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgtt 107  Q
    |||||||||||||||||  || |||||| |  |||||||||||||| ||||   ||||||| |||||| ||| || |||| | || | ||||| || |||    
T  16591679 tcactcgcgaggcgagacaagctactcgctgaggcgagcgatgaatatcagtaagggcaga-ttgcagttttcctaaaaaattcacccaatcccatggtt 16591581  T
Q  108 ctaaccttaaaactgattctaa 129  Q
    ||||||||||||||||||||||    
T  16591580 ctaaccttaaaactgattctaa 16591559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 325
Target Start/End: Complemental strand, 32160274 - 32160201
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| |||||||  |||||||||||    
T  32160274 cctacatcatgttaaatccagttttcagaattaaattacttagaattagagaaagttagtcttacccttacctt 32160201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 42462642 - 42462730
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgttctaaccttaaaactgattctaa 129  Q
    ||||||||||||||||||||| ||||||||| |||| |||||   ||| | |||||||||  || ||||||| |||||||||||||||||    
T  42462642 ggcgagcgatgaatgtcagctcgggcagaat-gcagtttttcacgaaaatgcatcaaatcacatggttctaagcttaaaactgattctaa 42462730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 44374845 - 44374894
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||| |||| |||| || ||||||||||||    
T  44374845 tcagaattatacaacttagaattagagaaagttactctcacccttacctt 44374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 44383710 - 44383759
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||| |||| |||| || ||||||||||||    
T  44383710 tcagaattatacaacttagaattagagaaagttactctcacccttacctt 44383759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 11054556 - 11054632
Alignment:
Q  116 aaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttcta 192  Q
    ||||||| ||||||||||||| |||||| ||  |||||||||| |||||  |||| ||| |||| ||||||||||||    
T  11054556 aaaactggttctaatcattgtactatgagtaatctaaggtctgaacactgtttcttcattaattcaacaggtttcta 11054632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 13870183 - 13870251
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  13870183 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 13870251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 16460146 - 16460078
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  16460146 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 16460078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 17059888 - 17059813
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagatttt 81  Q
    ||||||||||||||||||| |   | | |||| ||||||||||||||||||| |||| |||||| ||||||||||||    
T  17059888 ttcatcactcgcgaggcgaaaggtgctgctcgctatggcgagcgatgaatgttagctcgggcag-attgcagatttt 17059813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 41523757 - 41523825
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  41523757 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 41523825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 41526219 - 41526287
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  41526219 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 41526287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 2529482 - 2529427
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaa 96  Q
    ||||||||||||||||| ||| |||||||| ||||| ||||| ||||| |||||||    
T  2529482 ggcgagcgatgaatgtcggctcgggcagaagtgcagtttttcataaaaatcatcaa 2529427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 14948444 - 14948334
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||| |||| ||| ||||| | |  |||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  14948444 acttttaaccctaattctcaaattctcaaaaacgaaaagctacaacatgttaaatccaattttcagaatca-atgacttaatattattgaatgttagtcc 14948346  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  14948345 cacccttacctt 14948334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 18628412 - 18628471
Alignment:
Q  223 cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    ||||||||  |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  18628412 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 18628471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 27217699 - 27217808
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  27217699 acttttaaccctaattcccaaattctcaaaaactaaa-cctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 27217796  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  27217797 cacccttacctt 27217808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 9032832 - 9032708
Alignment:
Q  5 ttcatcactcgcgaggcgag-atcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttctt-aaaactcatcaaatccaa 102  Q
    |||||||||||||||||||| |||| |   |||| | ||||||||||||||||||||| ||| ||| |||||| |||||   |||| ||||| ||||  |    
T  9032832 ttcatcactcgcgaggcgaggatca-tcgttcgtgaaggcgagcgatgaatgtcagctcgggtaga-ttgcagtttttcacgaaaattcatctaatcaca 9032735  T
Q  103 ttgttctaaccttaaaactgattctaa 129  Q
    | ||||||| |||||||||||||||||    
T  9032734 tggttctaagcttaaaactgattctaa 9032708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 12318702 - 12318768
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaat 71  Q
    |||||||||||||||||||| |   || |||| |||||||||||||||||||  ||| |||||||||    
T  12318702 ttcatcactcgcgaggcgaggttcattgctcgctatggcgagcgatgaatgtaggctcgggcagaat 12318768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 70300 - 70248
Alignment:
Q  1 gaagttcatcactcgcgaggcga-gatcagttactcgttatggcgagcgatgaa 53  Q
    ||||||||||||||||||||||| ||||| | |||||| |||||||||||||||    
T  70300 gaagttcatcactcgcgaggcgaggatca-tcactcgtcatggcgagcgatgaa 70248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 74408 - 74356
Alignment:
Q  1 gaagttcatcactcgcgaggcga-gatcagttactcgttatggcgagcgatgaa 53  Q
    ||||||||||||||||||||||| ||||| | |||||| |||||||||||||||    
T  74408 gaagttcatcactcgcgaggcgaggatca-tcactcgtcatggcgagcgatgaa 74356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 16078069 - 16078114
Alignment:
Q  11 actcgcgaggcgagatcagttactcgttatggcgagcgatgaatgt 56  Q
    ||||||||||||||| ||  |||||| |||||||||||||||||||    
T  16078069 actcgcgaggcgagaacatatactcgctatggcgagcgatgaatgt 16078114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 16580577 - 16580626
Alignment:
Q  233 aaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  16580577 aaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 16580626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 325
Target Start/End: Original strand, 18955324 - 18955381
Alignment:
Q  268 tccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| |||||||||||  ||||||||||| |||| ||||||| |||| |||||||    
T  18955324 tccaattttcagaattataacacttagaattagagaaagttagtctcacctttacctt 18955381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 21661278 - 21661307
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  21661278 attaaagaaggttagtcccacccttacctt 21661307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 33060460 - 33060489
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  33060460 attaaagaaggttagtcccacccttacctt 33060489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 16233359 - 16233419
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaatt 274  Q
    |||||||||| ||||||  |||| ||| ||||||| | |||||||||||||||||||||||    
T  16233359 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatt 16233419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 16999436 - 16999487
Alignment:
Q  276 tcagaattatacaactta--gaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||  |||||| |||| ||||||| ||||||||||||    
T  16999436 tcagaattatacaacttatagaattagagaaagttagtctcacccttacctt 16999487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 32126328 - 32126388
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaatt 274  Q
    |||||||||| ||||||  |||| ||| ||||||| | |||||||||||||||||||||||    
T  32126328 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatt 32126388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 38 - 325
Target Start/End: Complemental strand, 12509637 - 12509351
Alignment:
Q  38 tatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcattgtt 137  Q
    ||||| |||||||||||| ||||| |||||||| |||||||||||| |||||||||| ||| |||| |||||||||||||||||||||||||||||| ||    
T  12509637 tatggtgagcgatgaatgacagctcgggcagaagtgcagattttctcaaaactcatccaattcaatggttctaaccttaaaactgattctaatcattatt 12509538  T
Q  138 ctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaacctaattcttaaatc 237  Q
    |||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12509537 ctatgaattgtctaaggtctggacactagttctacatcaatttaacaggtttctactcttaattaatcaattctccaacttttaacctaattcttaaatc 12509438  T
Q  238 ctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12509437 ctccaaaactacatcctaccacatgttaaatccaatt-tcagaattatacaacttagaattaaagaaggtttgtcccacccttacctt 12509351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 41 - 323
Target Start/End: Complemental strand, 14250365 - 14250085
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcattgttcta 140  Q
    ||||||||||||||||||||| |||||||| |||||||||||| | |||||||| ||| |||| |||||||||||||||||||||||||||||  |  |     
T  14250365 ggcgagcgatgaatgtcagctcgggcagaagtgcagattttctaataactcatccaattcaatggttctaaccttaaaactgattctaatcatcatcttg 14250266  T
Q  141 tgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaacctaattcttaaatcctc 240  Q
    ||||||  ||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||    
T  14250265 tgaatattctaaggtctggacactaattctacatcaacttaacaagtttctactcttaattgaccaattccccaacttttaacctaattcttaaat-ctc 14250167  T
Q  241 caaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacc 323  Q
    |||||||||||| ||||||||||||||||||||| | | ||||| ||||||||||||||||||||||||||||||| ||||||    
T  14250166 caaaactacatcttacaacatgttaaatccaatt-tgaaaattacacaacttagaattaaagaaggttagtcccactcttacc 14250085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 11885881 - 11885560
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttct-taaaactcatcaaatc 99  Q
    ||||||||||||| || |||| ||||||| |||||| || || |||||||||||||||||| |||||||| ||||  |||| |  |||||||| | ||||    
T  11885881 gaagttcatcactagcaaggctagatcagctactcgctacggtgagcgatgaatgtcagctcgggcagaa-tgcaatttttatcaaaaactcacccaatc 11885783  T
Q  100 caattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
    | || |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  11885782 ccatggttctaacattaaaactgattctaatcattgttctatgaatagtctaaggtctggacactatttctacatcaattcaacaggttcctactcttaa 11885683  T
Q  200 ttgatcaattctccaacttttaa-cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatt 298  Q
    || |||||||||||||||||||| ||||||||| ||||  ||| |||||||| |||||||| |||||||||||||| |||||||||||  ||||||||||    
T  11885682 ttaatcaattctccaacttttaaccctaattctcaaat--tcccaaactacaacctacaacttgttaaatccaattttcagaattataacacttagaatt 11885585  T
Q  299 aaagaaggttagtcccacccttacc 323  Q
    | |||| ||||||||||||||||||    
T  11885584 agagaaagttagtcccacccttacc 11885560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 16050760 - 16050978
Alignment:
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgat 204  Q
    |||||||| |||||||||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||| |||||||| |||||||||||| ||    
T  16050760 gttctaacattaaaactgattctaatcattgttctatgaataatctaaggtatggacactatttctacatcaattcaacaggttcctactcttaattaat 16050859  T
Q  205 caattctccaactt-ttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaaga 303  Q
    ||||| ||||| || | ||||||||||| ||||||| |||||||||| | |||||| ||||||| |||||| ||||||| |||||||||||||||| |||    
T  16050860 caatt-tccaatttctaaacctaattctcaaatcct-caaaactacaacatacaacttgttaaacccaatt-tcagaatcatacaacttagaattagaga 16050956  T
Q  304 aggttagtcccacccttacctt 325  Q
    | ||||||||||||||||||||    
T  16050957 aagttagtcccacccttacctt 16050978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 11 - 325
Target Start/End: Original strand, 13185630 - 13185946
Alignment:
Q  11 actcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagctt---gggcagaattgcagattttcttaaaactcatcaaatccaattgtt 107  Q
    ||||||||||||||| ||| |||||| ||||||||| ||||||||||||||    ||||||||| |||| |||||  |||||||| | ||| | ||   |    
T  13185630 actcgcgaggcgagaacagctactcgctatggcgagtgatgaatgtcagctctacgggcagaat-gcagtttttccaaaaactcacctaattccataact 13185728  T
Q  108 ctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactctt-aattgatca 206  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| || || || |||||||| |||| ||||    
T  13185729 ctaaccttaaaactgattctaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaatagattcctactcttaaattaatca 13185828  T
Q  207 attctccaactt-ttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaag 305  Q
    ||| |||||||| | ||||||||||  ||||  |||||||||||| |||||||| |||||||| | ||| | |||||||||  ||||| ||||| ||||     
T  13185829 att-tccaacttctaaacctaattcccaaat-ttccaaaactacaacctacaacttgttaaattcgatttttagaattatatcacttaaaattagagaaa 13185926  T
Q  306 gttagtcccacccttacctt 325  Q
    ||||||||||||||||||||    
T  13185927 gttagtcccacccttacctt 13185946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 41 - 340
Target Start/End: Complemental strand, 15447150 - 15446854
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcattgttcta 140  Q
    ||||||||||||||||||||| || |||||||||||||||||| ||||||||   ||||   | |||| ||| | ||||||||||||||  |||||||||    
T  15447150 ggcgagcgatgaatgtcagctcggacagaattgcagattttctcaaaactcactcaatctcttggttccaacatcaaaactgattctaagaattgttcta 15447051  T
Q  141 tgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaacctaattcttaaatcctc 240  Q
    ||||||| |||||| |||||||||| |||||||||||| |||| | ||  |  |||||||| |||||||||||| | |||||||||||||| |||  ||     
T  15447050 tgaatagtctaaggactggacactatttctacatcaatctaaccgattattcatcttaattcatcaattctccatc-tttaacctaattctcaaactct- 15446953  T
Q  241 caaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    ||||| ||| |||  | || |||||||| | ||| ||||||| |||||||||||||||| |||| |||||||||||||||||||| ||| ||||| ||||    
T  15446952 caaaattacctccctctacttgttaaat-ctattttcagaataatacaacttagaattagagaaagttagtcccacccttaccttagtaatgatgatcgg 15446854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 325
Target Start/End: Original strand, 11563471 - 11563776
Alignment:
Q  10 cactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagctt---gggcagaattgcagattttcttaaaactcatcaaatccaattgt 106  Q
    ||||| ||||||||||  ||||||||| |||||||||||||||||||||| |    ||||||||| |||| |||    |||||||| | ||| | ||       
T  11563471 cactcacgaggcgagagaagttactcgctatggcgagcgatgaatgtcagttctgcgggcagaat-gcagttttcaacaaaactcacctaattccataac 11563569  T
Q  107 tctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatca 206  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||           ||||| ||||||||||||||| | |     
T  11563570 tctaaccttaaaactgattctaatcattgttctatgaataacctaaggtctggacattaattc-----------aacagatttctactcttaattcaacc 11563658  T
Q  207 attctccaactttt-aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaag 305  Q
    | | | |||||||| ||||||||||  |||| | ||||||||||| |||||||| ||||||||   ||| |||||||||||| ||||||||||| |||||    
T  11563659 aat-tacaacttttaaacctaattcccaaattc-ccaaaactacaacctacaacttgttaaatttgattttcagaattataccacttagaattagagaag 11563756  T
Q  306 gttagtcccacccttacctt 325  Q
    ||||||||||||||||||||    
T  11563757 gttagtcccacccttacctt 11563776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 42324057 - 42323972
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| |||||||||||| |||| ||||| |||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  42324057 ccaaaactacaacctacaacatgtcaaattcaattttcagaattatacaacttaaaattaaataatgttagtcccacccttacctt 42323972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 37039016 - 37039085
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggtta 309  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||    
T  37039016 ccaaaactacaacctacaacatgttaaatccaattttcagaattatacaacttataattaaagaatgtta 37039085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 252 - 335
Target Start/End: Original strand, 16979890 - 16979973
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatg 335  Q
    |||||| ||||||||||||| || ||||||||| |  |||||||||||||||| |||||||||||||||||||| |||||||||    
T  16979890 cctacatcatgttaaatccagttttcagaattaaaatacttagaattaaagaaagttagtcccacccttaccttagtattgatg 16979973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 17044937 - 17045017
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  17044937 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 17045017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 17047097 - 17047177
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  17047097 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 17047177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 19568293 - 19568209
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| |||||||| ||||||||| | || ||||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  19568293 ccaaaactacaacctacaacctgttaaatctagtt-tcagaatcatacaacttagaattagagaaagttagtcccacccttacctt 19568209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 22306664 - 22306584
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  22306664 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 22306584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 33565053 - 33565138
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||| || |||||||| |||||||| ||||| |||||||||||| ||||||||||| |||| ||||||| ||||||||||||    
T  33565053 ccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtcacacccttacctt 33565138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 40807967 - 40808047
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  40807967 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 40808047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 44274389 - 44274469
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  44274389 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 44274469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 16828563 - 16828471
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    |||||||||||||| |||||| |||||||||||||||||||| ||||  |||   ||||  || |||||||||||||||||||||||||||||    
T  16828563 ggcgagcgatgaatctcagctcgggcagaattgcagattttcataaacatcactcaatctcatggttctaaccttaaaactgattctaatcat 16828471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 334
Target Start/End: Complemental strand, 24177822 - 24177728
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgat 334  Q
    |||||||||||| ||||| || | ||||||||| || |||||||||||||||||| ||||| |||| ||| |||||||||||||||| ||||||||    
T  24177822 tccaaaactacaacctaccacctattaaatccagtt-tcagaattatacaacttataattagagaaagtttgtcccacccttaccttagtattgat 24177728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 35961015 - 35960929
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||| || |||||||| |||||||| ||||| |||||||||||| || |||||||| |||| |||| |||||||||||||||    
T  35961015 tccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacatagaattagagaaagttaatcccacccttacctt 35960929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 10311476 - 10311575
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| ||| | ||||||| |||||||||||  |||| ||||| ||||||||||||||| |||||||| |||| |||||||||||||||    
T  10311476 aacctaattctcaaattctc-ataactacaacctacaacatgcaaaattcaatt-tcagaattatacaacgtagaattagagaaagttagtcccaccctt 10311573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 11259402 - 11259482
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||  |||||||||| ||||| ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  11259402 aactacaatctacaacatgctaaattcaatt-tcagaattatacaacttagaattagagaaagttagtctcacccttacctt 11259482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 40812804 - 40812884
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  40812804 aactacaacctacaacatgctaaactcaatt-tcagaattatgcaacttagaattagagaaagttagtcccacccttacctt 40812884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 49900701 - 49900781
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  49900701 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaaattagtcccacccttacctt 49900781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 16050694 - 16050749
Alignment:
Q  6 tcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagct 61  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  16050694 tcatcactcgcgaggcgagagcagctactcgctatggcgagcgatgaatgtcagct 16050749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 22758944 - 22758835
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||||||| ||||||| | ||||||||||||||||| ||||| ||||||||| |  |||||||||||  |||||||||||     
T  22758944 acttttaaccctaattcccaaatcctc-aaaactaaa-cctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggttagtct 22758847  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  22758846 cacccttacctt 22758835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 257 - 340
Target Start/End: Original strand, 36528851 - 36528933
Alignment:
Q  257 aacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    ||||||||||| ||||| ||||||||||||  ||||||||||| |||| |||| ||||||||||||||| ||||||||| ||||    
T  36528851 aacatgttaaacccaat-ctcagaattatattacttagaattagagaaagttaatcccacccttaccttagtattgatgatcgg 36528933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 17518954 - 17518874
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||  ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  17518954 aactacaacctacaacattctaaagtcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttgcctt 17518874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 17533816 - 17533736
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||  ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  17533816 aactacaacctacaacattctaaagtcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttgcctt 17533736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 17539077 - 17539157
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| | || ||||||| ||||||||||||    
T  17539077 aactacaacctacaacatgataaaatcaatt-tcagaattatacaacttagaattagataaagttagtctcacccttacctt 17539157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 17541436 - 17541485
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  17541436 tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 17541485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 325
Target Start/End: Complemental strand, 18699504 - 18699431
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||| ||||| ||||||||| |  |||||||||||  ||||| ||||||||||||||||||    
T  18699504 cctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacctt 18699431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 325
Target Start/End: Complemental strand, 9511019 - 9510917
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| | |||||||||||  |||| || ||||||||||| || ||||||| |||||||||||||||| |||| ||||||  |||||||    
T  9511019 aacctaattctcaaattc-ccaaaactacaatctaccacctgttaaatccagtt-tcagaatcatacaacttagaattagagaaagttagtttcaccctt 9510922  T
Q  321 acctt 325  Q
    |||||    
T  9510921 acctt 9510917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 325
Target Start/End: Complemental strand, 9518994 - 9518892
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| | |||||||||||  |||| || ||||||||||| || ||||||| |||||||||||||||| |||| ||||||  |||||||    
T  9518994 aacctaattctcaaattc-ccaaaactacaatctaccacctgttaaatccagtt-tcagaatcatacaacttagaattagagaaagttagtttcaccctt 9518897  T
Q  321 acctt 325  Q
    |||||    
T  9518896 acctt 9518892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 325
Target Start/End: Complemental strand, 49968943 - 49968860
Alignment:
Q  241 caaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||  ||||||| |||||||| ||||| ||||||| ||||| ||||||||||  ||||||||||||||| ||||||||    
T  49968943 caaaactacaagctacaacctgttaaattcaattttcagaatcataca-cttagaattagtgaaggttagtcccactcttacctt 49968860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 340
Target Start/End: Complemental strand, 3264031 - 3263949
Alignment:
Q  257 aacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    ||||||||||| ||||| |||| |||||||  ||||||||||| ||||||||| ||| ||||||||||| ||||||||| ||||    
T  3264031 aacatgttaaacccaat-ctcataattatattacttagaattagagaaggttaatccgacccttaccttagtattgatgatcgg 3263949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 323
Target Start/End: Original strand, 14508818 - 14508896
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacc 323  Q
    ||||||| ||||||||||| |||   ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  14508818 aactacaacctacaacatgctaacctcaatt-tcagaattatacaacttagaattagagaaagttagtctcacccttacc 14508896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 17694033 - 17694115
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    |||| ||||||| ||||||||||| ||||  ||||| | |||||||||||||||||||||| |||| ||||||| |||||||||    
T  17694033 tccataactacaacctacaacatgctaaactcaatttt-agaattatacaacttagaattagagaaagttagtctcacccttac 17694115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 15566746 - 15566792
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||    
T  15566746 tcagaattatacaacttagaattagagaaagttagtcccacccttac 15566792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 41172452 - 41172372
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| ||||| |||||||||||| || || |||| ||||||||||||||||||||    
T  41172452 aactacaacctacaacatgctaaactcaatt-tcagagttatacaacttataagtagagaaagttagtcccacccttacctt 41172372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 7780670 - 7780560
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||| |||| ||| ||||| | | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  7780670 acttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 7780572  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  7780571 cacccttacctt 7780560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 14604593 - 14604679
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa 88  Q
    |||||||||||||||||||| |||   || | |||| |  ||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  14604593 gaagttcatcactcgcgaggtgaggcaagctgctcgctgaggcgagcgatgaatgtcagctcgggcagaa-tgcagattttctcaaaa 14604679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 17464015 - 17464125
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  17464015 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 17464113  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  17464114 cacccttacctt 17464125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 34160163 - 34160273
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  34160163 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 34160261  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  34160262 cacccttacctt 34160273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 43888865 - 43888756
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||||||| ||||||| | ||||||||||||||||| | ||| ||||||||| |  |||||||||||  || || ||||||    
T  43888865 acttttaaccctaattcccaaatcctc-aaaactaaa-cctacaacatgttaaataccattttcagaattaaaacacttagaattattgatggctagtcc 43888768  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  43888767 cacccttacctt 43888756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 325
Target Start/End: Original strand, 10563674 - 10563759
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| |||||||  |||||||||| ||||  ||||| ||| |||||||||||||| ||||| |||| |||||||||||| |||||||    
T  10563674 tccataactacaaactacaacatgctaaactcaatt-tcataattatacaacttaaaattagagaaagttagtcccaccattacctt 10563759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 325
Target Start/End: Original strand, 22652751 - 22652824
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||| ||||||||||| | || ||||||||| |  ||||||||||| |||| ||||||||||| ||||||||    
T  22652751 cctacatcatgttaaatctagttttcagaattaaattacttagaattagagaaagttagtcccactcttacctt 22652824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 321
Target Start/End: Original strand, 35354573 - 35354649
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctta 321  Q
    ||||||| || |||||||| ||||  ||||| |||||||||||||||||| ||||| |||| ||||||||||| ||||    
T  35354573 aactacaaccaacaacatgctaaactcaatt-tcagaattatacaacttaaaattagagaaagttagtcccacactta 35354649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 5200284 - 5200244
Alignment:
Q  285 tacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  5200284 tacaacttagaattagagaaagttagtcccacccttacctt 5200244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 10247028 - 10246937
Alignment:
Q  233 aaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||||||||||||||    
T  10247028 aaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcccacccttacctt 10246937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 12037473 - 12037391
Alignment:
Q  5 ttcatcactcgcgaggcgag-atcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa 88  Q
    |||||||||||||||||||| |||| || |||| |||||||||||||||||||  ||| |||||||| ||||| |||||| ||||    
T  12037473 ttcatcactcgcgaggcgaggatca-ttgctcgctatggcgagcgatgaatgtaggctcgggcagaa-tgcagtttttctcaaaa 12037391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 13151113 - 13151045
Alignment:
Q  215 acttttaacct-aattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    ||||||||||| |||||  |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  13151113 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 13151045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 13153581 - 13153513
Alignment:
Q  215 acttttaacct-aattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    ||||||||||| |||||  |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  13153581 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 13153513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 45577766 - 45577698
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  45577766 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 45577698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 55477329 - 55477397
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  55477329 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 55477397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 15978372 - 15978482
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||| | | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  15978372 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 15978470  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  15978471 cacccttacctt 15978482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 16453600 - 16453490
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||| |||| ||| ||||| | | |||||||||| |||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  16453600 acttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatattaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 16453502  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  16453501 cacccttacctt 16453490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 30205920 - 30205803
Alignment:
Q  12 ctcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgttcta 110  Q
    ||||||||||||||  || ||||||    ||||||||||||||||| |   ||||||| |||||| |||||| |||| | || | ||||  |||||||||    
T  30205920 ctcgcgaggcgagacaagctactcgcggaggcgagcgatgaatgtctgtacgggcaga-ttgcagtttttctcaaaaattcacccaatctcattgttcta 30205822  T
Q  111 accttaaaactgattctaa 129  Q
    |||||||||||||||||||    
T  30205821 accttaaaactgattctaa 30205803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 6003207 - 6003236
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  6003207 attaaagaaggttagtcccacccttacctt 6003236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 21845682 - 21845653
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  21845682 attaaagaaggttagtcccacccttacctt 21845653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23052602 - 23052546
Alignment:
Q  1 gaagttcatcactcgcgaggcgag-atcagttactcgttatggcgagcgatgaatgtc 57  Q
    |||||||||||||||||||||||| |||| | | ||| ||||||||||||||||||||    
T  23052602 gaagttcatcactcgcgaggcgagaatca-tcattcgctatggcgagcgatgaatgtc 23052546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 48631353 - 48631382
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  48631353 attaaagaaggttagtcccacccttacctt 48631382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 50350846 - 50350817
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  50350846 attaaagaaggttagtcccacccttacctt 50350817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 53646089 - 53646060
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  53646089 attaaagaaggttagtcccacccttacctt 53646060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 1864478 - 1864418
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaatt 274  Q
    |||||||||| ||||||  |||| ||| ||||||| | |||||||||||||||||||||||    
T  1864478 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatt 1864418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 184
Target Start/End: Original strand, 11201992 - 11202135
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttct-taaaactcatcaaatccaattgttctaaccttaaaactgattctaatcattgttct 139  Q
    |||||||||||||| ||||||  | ||| ||||||| || |||  |||| ||| ||||||| || |||||||||||||||||||||| ||| ||  | ||    
T  11201992 ggcgagcgatgaatttcagctcagacag-attgcagtttgtctcaaaaattcaccaaatcccatggttctaaccttaaaactgattccaattatcatcct 11202090  T
Q  140 atgaatagcctaaggtctggacactaattctacatcaatttaaca 184  Q
    ||| ||   |||||||||| ||||   |||||||||||| |||||    
T  11202091 atggattatctaaggtctgtacacattttctacatcaatctaaca 11202135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 11889180 - 11889251
Alignment:
Q  9 tcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagatttt 81  Q
    |||||||||||||||||  || ||||||    ||||||||||||||||||||  |||||||| ||||||||||    
T  11889180 tcactcgcgaggcgagactagctactcgccggggcgagcgatgaatgtcagcacgggcagaa-tgcagatttt 11889251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 12933832 - 12933757
Alignment:
Q  1 gaagttcatcactcgcgaggcga-gatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcag 76  Q
    ||||||||||||||||||||||| ||||| ||  |||| | ||||||||||||||||  ||| |||||||| |||||    
T  12933832 gaagttcatcactcgcgaggcgaggatca-ttgttcgtgagggcgagcgatgaatgttggctcgggcagaagtgcag 12933757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 28847944 - 28847876
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||  |||| ||| ||||| | | ||||||||||||||||||||||| |||||||    
T  28847944 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaat 28847876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 35064627 - 35064568
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatta 299  Q
    |||| ||||||| ||||||||||| ||||  ||||| ||| ||||||||||||||||||||    
T  35064627 tccataactacaacctacaacatgctaaactcaatt-tcaaaattatacaacttagaatta 35064568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 39231406 - 39231450
Alignment:
Q  85 aaaactcatcaaatccaattgttctaaccttaaaactgattctaa 129  Q
    |||| ||| |||| || ||||||||||||||||||||||||||||    
T  39231406 aaaattcaccaaaacccattgttctaaccttaaaactgattctaa 39231450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 218; Significance: 1e-120; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 40 - 321
Target Start/End: Complemental strand, 52829 - 52549
Alignment:
Q  40 tggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcattgttct 139  Q
    |||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| ||| |||| |||||||| ||||||||||||||||||||||||||    
T  52829 tggcgagcgatgaatgtcagctcgggcaaaattgcagattttctcaaaactcatccaattcaatggttctaactttaaaactgattctaatcattgttct 52730  T
Q  140 atgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaacctaattcttaaatcct 239  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  52729 atgaatagtctaaggtctggacactaattttacatcaatttaacaggtttctactctaaatcgatcaattctccaacttttaacctaattctcaaatcct 52630  T
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctta 321  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  52629 -caaaactacatcctacaacatgttaaatccaattctcagaattacacaacttagaattaatgaaggttagtcccaccctta 52549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 325
Target Start/End: Original strand, 55710 - 55992
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcattgttcta 140  Q
    ||||||||||||||||||||| ||||||||||||||||||||  |||||||||| ||||  || |||||||||||||||  ||||||||| ||  | |||    
T  55710 ggcgagcgatgaatgtcagctcgggcagaattgcagattttcacaaaactcatctaatctcatagttctaaccttaaaatcgattctaattatcatccta 55809  T
Q  141 tgaatagcctaaggtctggacactaattctacatcaatttaacaggtttcta-ctcttaattgatcaattctccaacttttaacctaattcttaaatcct 239  Q
    || ||   ||||||| || |||| | ||||||||||||| |||| ||||| | |   |||| | | |||||||||| ||| | ||||||||| ||||  |    
T  55810 tggattatctaaggtttgtacacaatttctacatcaattcaacatgtttccatcatctaatcggttaattctccaattttaaccctaattctcaaat--t 55907  T
Q  240 ccaaaactacatcctacaa-catgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    | ||||||  | ||||||| |||||||||| ||||| ||||||| | |  ||| |||||||  ||||||||||| ||||||||||||    
T  55908 ctaaaactttaacctacaaccatgttaaattcaatt-tcagaatcaca-tactcagaattattgaaggttagtctcacccttacctt 55992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 42697512 - 42697835
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctcatcaaatc 99  Q
    |||||||||||||||||||||||||||||||||||| || || |||||||||||||||||| ||| ||||| ||||||||||| |||| |||||| |||     
T  42697512 gaagttcatcactcgcgaggcgagatcagttactcgctaaggggagcgatgaatgtcagctcgggtagaat-gcagattttctcaaaaactcatccaatt 42697610  T
Q  100 caattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
      || ||||||||  ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  42697611 tcatggttctaactataaaactgattctaatcattgttttatgaatagtctaaggtatggacactaattctacatcaatttaactggttcctactcttaa 42697710  T
Q  200 ttgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatta 299  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42697711 ttgatcaattctccaacttttaacctaattctcaaatcct-caaaactacaacctacaacatgttaaatccaattctcagaattatacaacttagaatta 42697809  T
Q  300 aagaaggttagtcccacccttacctt 325  Q
    ||||||||||||| ||||||||||||    
T  42697810 aagaaggttagtctcacccttacctt 42697835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 11 - 284
Target Start/End: Original strand, 24727121 - 24727392
Alignment:
Q  11 actcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttcta 110  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| ||||||| |||||||||||||| |||| |||||     
T  24727121 actcgcgaggcgagatcagttactcgctatggcgagcaatgaatgtcagctcgggcagaattgcaaattttctcaaaactcatcaaattcaatggttctg 24727220  T
Q  111 accttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattc 210  Q
    || |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  24727221 actttaaaactgactctaatcattgttctatgaatagtctaaggtctggacactaattctacatcaatttaacagattcctactcttaattaatcaattc 24727320  T
Q  211 tccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaatta 284  Q
    ||||||||||||||||||||| ||||| ||  |||||| | ||||||||||||||||||||||||| |||||||    
T  24727321 tccaacttttaacctaattctcaaatcatc--aaactaaaacctacaacatgttaaatccaattcttagaatta 24727392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 45755249 - 45755571
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctca-tcaaat 98  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| |||| ||||||    
T  45755249 gaagttcatcactcgctaggcgagatcagctactcgttatggcgagcgatgaatgtcagctcgggcagaat-gcagattttctcaaaaactcactcaaat 45755347  T
Q  99 ccaattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactctta 198  Q
    ||| | ||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||||||||||||| ||||  || |||||||||    
T  45755348 cca-tggttctaaccgtaaaactgattctaatcattgttctattaatagtctaaagtctggacactatttctacatcaattcaacaaattcctactctta 45755446  T
Q  199 attgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatt 298  Q
    ||| || ||||||||||| |||||||||||||| |||| || |||||||||| |||||||| ||||||||||| || ||||||| ||| |||||| ||||    
T  45755447 attaattaattctccaac-tttaacctaattctcaaattct-caaaactacaacctacaacttgttaaatccacttttcagaatcatataacttataatt 45755544  T
Q  299 aaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||| ||||||||||||    
T  45755545 aaagaaggttagtctcacccttacctt 45755571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 41 - 340
Target Start/End: Complemental strand, 12328026 - 12327729
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcattgttcta 140  Q
    ||||||||||||||||||| | ||||||||||||||||||||| ||||||||   ||||   | |||||||||| |||||||||||||| |||||||||     
T  12328026 ggcgagcgatgaatgtcagttcgggcagaattgcagattttctcaaaactcactcaatctcttggttctaacctcaaaactgattctaaacattgttctc 12327927  T
Q  141 tgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaacctaattcttaaatcctc 240  Q
    ||||||| |||||||||||| |||| |||||||||||| |||| | ||  |  |||||||| |||||||||||| |||||||||||||||| |||  ||     
T  12327926 tgaatagtctaaggtctggatactatttctacatcaatctaaccgattattcatcttaattcatcaattctccatcttttaacctaattctcaaactct- 12327828  T
Q  241 caaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    ||||| |||||||  | || |||||||||| ||| ||||||| |||||||||||||||| |||| ||||||| |||||||||||| ||||||||| ||||    
T  12327827 caaaattacatccctctacttgttaaatcc-attttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttagtattgatgatcgg 12327729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 110 - 325
Target Start/End: Original strand, 13302742 - 13302953
Alignment:
Q  110 aaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaatt 209  Q
    |||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||   |||||||||||| | | | | |    
T  13302742 aaccttaatactgattctaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaaca-aattctactcttaaatcaaccaat 13302840  T
Q  210 ctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggtta 309  Q
     ||||||  | ||||||||||  |||| | ||||||||||| |||||||| |||||||| ||||| |||||||||||| ||||||||||| |||| ||||    
T  13302841 ttccaac--taaacctaattcccaaattc-ccaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagtta 13302937  T
Q  310 gtcccacccttacctt 325  Q
    ||| ||||||||||||    
T  13302938 gtctcacccttacctt 13302953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 41 - 183
Target Start/End: Original strand, 51336268 - 51336410
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcattgttcta 140  Q
    ||||||||||||||||  ||| ||||| ||||||||||||||| ||||||||   ||||   | |||||||||| |||||||||||||| ||||||||||    
T  51336268 ggcgagcgatgaatgttggctcgggcataattgcagattttctcaaaactcactcaatctcttggttctaacctcaaaactgattctaaacattgttcta 51336367  T
Q  141 tgaatagcctaaggtctggacactaattctacatcaatttaac 183  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||    
T  51336368 tgaatagtctaaggtctggacactatttctacatcaatctaac 51336410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 325
Target Start/End: Complemental strand, 7320808 - 7320595
Alignment:
Q  110 aaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaatt 209  Q
    |||| |||||||||||||||||||||| |||||||||  |||||||||| |||||  ||||||||||||| ||||  |||||||| |||| | | | | |    
T  7320808 aaccctaaaactgattctaatcattgtactatgaataatctaaggtctgaacactgtttctacatcaattcaacaaatttctactattaaatcaaccaat 7320709  T
Q  210 ctccaac-ttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggtt 308  Q
     | |||| | | ||| ||||||  |||| | |||||||||||  ||||||| |||||||| ||||| ||||||| |||| |||||||||||  | |||||    
T  7320708 -tacaacatctaaacataattcccaaattc-ccaaaactacaatctacaacctgttaaattcaattttcagaataatac-acttagaattagtgtaggtt 7320612  T
Q  309 agtcccacccttacctt 325  Q
    |||||||||||||||||    
T  7320611 agtcccacccttacctt 7320595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 50001454 - 50001542
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| ||||||||||||| || ||||||||| |  |||||||||||||||| |||||||||||||||||||| ||||||||| ||||    
T  50001454 cctacatcatgttaaatccagttttcagaattaaaatacttagaattaaagaaagttagtcccacccttaccttagtattgatgatcgg 50001542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 19676682 - 19676762
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  19676682 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 19676762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 21046130 - 21046050
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  21046130 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 21046050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 42912998 - 42913100
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    |||||||||| ||||| | ||| ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||| |||||||    
T  42912998 aacctaattcctaaattc-ccacaactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcaccctt 42913095  T
Q  321 acctt 325  Q
    |||||    
T  42913096 acctt 42913100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 335
Target Start/End: Complemental strand, 29763706 - 29763623
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatg 335  Q
    |||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| |||||||||||||||||||| |||||||||    
T  29763706 cctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatg 29763623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 261 - 340
Target Start/End: Original strand, 51336467 - 51336545
Alignment:
Q  261 tgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    ||||||||||| || ||||||| |||||||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  51336467 tgttaaatccattt-tcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgg 51336545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 16058400 - 16058315
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  16058400 tccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaatttagtcccacccttacctt 16058315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 4595939 - 4595854
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| |||||||| |||||||| | ||| ||||||||||||  |||||||||| |||| ||||||| ||||||||||||    
T  4595939 ccaaaactacaacctacaacttgttaaattcgattttcagaattatacctcttagaattagagaaagttagtctcacccttacctt 4595854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 21708117 - 21708200
Alignment:
Q  241 caaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||| | ||||||||||||||||||||||| ||||||||| |  ||| |||||||  ||||||||||||||||||||||||    
T  21708117 caaaactataacctacaacatgttaaatccaattttcagaattaca-tactcagaattattgaaggttagtcccacccttacctt 21708200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 21712660 - 21712743
Alignment:
Q  241 caaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||| | ||||||||||||||||||||||| ||||||||| |  ||| |||||||  ||||||||||||||||||||||||    
T  21712660 caaaactataacctacaacatgttaaatccaattttcagaattaca-tactcagaattattgaaggttagtcccacccttacctt 21712743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 335
Target Start/End: Complemental strand, 46197812 - 46197736
Alignment:
Q  259 catgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatg 335  Q
    ||||||||||||| || ||||||||| |  ||||||||||| |||| |||||||||||||||||||| |||||||||    
T  46197812 catgttaaatccagttttcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatg 46197736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 242 - 325
Target Start/End: Complemental strand, 21239132 - 21239050
Alignment:
Q  242 aaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||| ||||| || ||||||||||| || ||||||| |||||||||||||||| |||| ||||||||||||| ||||||    
T  21239132 aaaactacaacctaccacctgttaaatccagtt-tcagaatcatacaacttagaattagagaaagttagtcccacccatacctt 21239050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 24723437 - 24723352
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||  |||| || |||||||| || || ||||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  24723437 tccaaaactacaatctaccacctgttaaattcagtt-tcagaatcatacaacttagaattagagaaagttagtcccacccttacctt 24723352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 22350683 - 22350767
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| |||||||| |||||||| ||||| ||||||| |||  ||| |||||||  ||||||||||||||||||||||||    
T  22350683 ccaaaactacaacctacaacttgttaaattcaattttcagaatcata-tactcagaattattgaaggttagtcccacccttacctt 22350767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 51324471 - 51324555
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| ||||| || ||||||||||| || ||||||| ||||||||||||||||  ||| ||||||| ||||||||||||    
T  51324471 ccaaaactacaacctaccacctgttaaatccagtt-tcagaatcatacaacttagaattagggaaagttagtctcacccttacctt 51324555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 325
Target Start/End: Complemental strand, 7051986 - 7051923
Alignment:
Q  261 tgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| || ||||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  7051986 tgttaaatccagtt-tcagaatcatacaacttagaattagagaaagttagtcccacccttacctt 7051923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 20633704 - 20633636
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctta 321  Q
    ||||||||||| ||||  ||||| |||||||||||||||||||||||| || | ||||||||||||||||    
T  20633704 cctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagcaagttagtcccaccctta 20633636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 13989703 - 13989813
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  13989703 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 13989801  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  13989802 cacccttacctt 13989813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 14237766 - 14237656
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| |||  |||||  ||||  |||  |||||||    
T  14237766 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcata-gacttaagattattgaatattagtcc 14237668  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  14237667 cacccttacctt 14237656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 24727383 - 24727418
Alignment:
Q  290 cttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  24727383 cttagaattaaagaaggttagtcccacccttacctt 24727418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 51083115 - 51083225
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||| ||| |||  |||||  ||||  ||| ||||||||    
T  51083115 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcaaaatcata-gacttaagattattgaatgttagtcc 51083213  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  51083214 cacccttacctt 51083225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 41373320 - 41373421
Alignment:
Q  223 cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    ||||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| |||||||||||||||||    
T  41373320 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcccacccttac 41373418  T
Q  323 ctt 325  Q
    |||    
T  41373419 ctt 41373421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 52940308 - 52940220
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttc-ttaaaactcatcaaatccaattgttctaaccttaaaactgattctaa 129  Q
    ||||||||||||||||||||| |||||||| |||||||||||   ||||  |||||| ||  || ||||||| |||||||||||||||||    
T  52940308 ggcgagcgatgaatgtcagctcgggcagaa-tgcagattttcacgaaaatgcatcaattcacatggttctaagcttaaaactgattctaa 52940220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 16362776 - 16362867
Alignment:
Q  233 aaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||||||||||||||    
T  16362776 aaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcccacccttacctt 16362867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 21474409 - 21474341
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  21474409 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 21474341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 21841608 - 21841676
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||| |||| ||| ||||| | | ||||||||||||||||||||||| |||||||    
T  21841608 acttttaaccctaattctgaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaat 21841676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 23593055 - 23592987
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| |||||||    
T  23593055 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaat 23592987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 325
Target Start/End: Original strand, 48444351 - 48444442
Alignment:
Q  233 aaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||||||||||||||    
T  48444351 aaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcccacccttacctt 48444442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 21922614 - 21922504
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||| | | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  21922614 acttttaaccctaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 21922516  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  21922515 cacccttacctt 21922504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 24782631 - 24782549
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa 88  Q
    |||||||||||||||||||| |   || |||| |||||||||||||||||||  ||| |||||||| ||||| |||||| ||||    
T  24782631 ttcatcactcgcgaggcgaggttcattgctcgctatggcgagcgatgaatgtaggctcgggcagaa-tgcagtttttctcaaaa 24782549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 44822107 - 44822022
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| ||||||| ||||| || |||||||||||||| ||| ||| ||| || | |||||||  ||||||||||||||| ||||||||    
T  44822107 tccagaactacaacctaccacctgttaaatccaattttcataatcatataa-tcagaattattgaaggttagtcccactcttacctt 44822022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 11946409 - 11946453
Alignment:
Q  241 caaaactacatcctacaacatgttaaatccaattctcagaattata 286  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||    
T  11946409 caaaactataacctacaacatgttaaatccaatt-tcagaattata 11946453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 14792593 - 14792564
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  14792593 attaaagaaggttagtcccacccttacctt 14792564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 16381986 - 16382030
Alignment:
Q  223 cctaattcttaaatcctccaaaactacatcctacaacatgttaaat 268  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||    
T  16381986 cctaattctcaaatcctcaaaaacta-atcctacaacatgttaaat 16382030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 22124969 - 22125009
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttc 82  Q
    ||||||||||||||||||||| |||||||| |||||||||||    
T  22124969 ggcgagcgatgaatgtcagctcgggcagaa-tgcagattttc 22125009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 41225484 - 41225455
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  41225484 attaaagaaggttagtcccacccttacctt 41225455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 41226737 - 41226708
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  41226737 attaaagaaggttagtcccacccttacctt 41226708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 325
Target Start/End: Complemental strand, 20708088 - 20708060
Alignment:
Q  297 ttaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||||||||    
T  20708088 ttaaagaaggttagtcccacccttacctt 20708060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 28203992 - 28203952
Alignment:
Q  85 aaaactcatcaaatccaattgttctaaccttaaaactgatt 125  Q
    |||||||| | ||||| ||||||||||||||||||||||||    
T  28203992 aaaactcacccaatcccattgttctaaccttaaaactgatt 28203952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 5 - 325
Target Start/End: Original strand, 4117 - 4436
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctcatcaaatccaat 103  Q
    |||||| |||||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||| ||||||||||| |||| |||||| ||| | ||    
T  4117 ttcatccctcgcgaggcgagatcagctactcgctatggcgagtgatgaatgtcagctcgggcagaat-gcagattttctcaaaaactcatccaattccat 4215  T
Q  104 tgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattga 203  Q
     |||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||  |||||||||||||    
T  4216 ggttctaacattaaaactgattctaatcattgttttatgaatagtctaaggtctggacattaattctacatcaatttaacaggttcatactcttaattga 4315  T
Q  204 tcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaaga 303  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4316 tcaattctccaacttttaacctaattctcaaatcct-caaaactacaacctacaacatgttaaatccagttctcagaattatacaacttagaattaaaga 4414  T
Q  304 aggttagtcccacccttacctt 325  Q
    |||||||||||| | |||||||    
T  4415 aggttagtcccatcgttacctt 4436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 178; Significance: 6e-96; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 126627 - 126313
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctcatcaaatc 99  Q
    ||||||||||||||||||||||||||||  |||||| || ||||||||||||||||||||| ||||||||| | ||||||||| |||| |||| | |||     
T  126627 gaagttcatcactcgcgaggcgagatcaactactcgctaaggcgagcgatgaatgtcagctcgggcagaat-gtagattttctcaaaaactcacccaatt 126529  T
Q  100 caattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
      || ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || ||||| ||||||||||    
T  126528 acatagttctaaccttaaaactgattataatcattgttctatgaatagtctaaggtctggacactatttctacatcaattcaataggttcctactcttaa 126429  T
Q  200 ttgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatta 299  Q
    || ||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  126428 ttaatcaattctccaacttttaacctaattctcaaatcct-caaaactacaatctacaacttgttaaatccaatt-tcagaatcatacaacttagaatta 126331  T
Q  300 aagaaggttagtcccacc 317  Q
     |||| ||||||||||||    
T  126330 gagaaagttagtcccacc 126313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 1292 - 1358
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaat 71  Q
    ||||||||||||||||||||| | | | |||| |  |||||||||| |||||||||| |||||||||    
T  1292 ttcatcactcgcgaggcgagacctgctgctcgctgaggcgagcgataaatgtcagctcgggcagaat 1358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 175; Significance: 4e-94; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 29118 - 29439
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa-ctcatcaaatc 99  Q
    ||||||||||||||| ||| ||||||||| || ||| || ||||||||||||||||||||| ||||||||| ||||||||||| |||| |||| | |||     
T  29118 gaagttcatcactcgtgagacgagatcagctattcgctaaggcgagcgatgaatgtcagctcgggcagaat-gcagattttctcaaaaactcacccaatt 29216  T
Q  100 caattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
    | || ||||||||||||||||||||||||||||||||||||||||  | ||||||||| |||| || ||||||||||||| |||| ||| ||||||||||    
T  29217 ccatggttctaaccttaaaactgattctaatcattgttctatgaa--gtctaaggtctagacattatttctacatcaattcaacatgttcctactcttaa 29314  T
Q  200 ttgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatta 299  Q
    || ||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||| ||||||||||| || ||||||| ||||||||||||||||    
T  29315 ttaatcaattctccaacttttaacttaattctcaaatcc-ccaaaactacaacctacaacttgttaaatccacttttcagaatcatacaacttagaatta 29413  T
Q  300 aagaaggttagtcccacccttacctt 325  Q
    |||||| |||||||||||||||||||    
T  29414 aagaagattagtcccacccttacctt 29439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 155; Significance: 3e-82; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 123 - 325
Target Start/End: Original strand, 60745 - 60946
Alignment:
Q  123 attctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaa 222  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  60745 attctaatcattgttctatgaatagtctaaggtctggtcactaattctacatcaatttaacaggttcctactcttaattaatcaattcaccaacttttaa 60844  T
Q  223 cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  60845 cctaattctcaaatcct-caaaactacaacctacaacatgttaaattcaattctcagaattatacaacttagaattaaagaaggttagtctcatccttac 60943  T
Q  323 ctt 325  Q
    |||    
T  60944 ctt 60946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 60641 - 60727
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaa 88  Q
    ||||||||||||||||||||||||  ||  |||||| || ||||||||||||||||||||| || ||||| |||||||||||| ||||    
T  60641 gaagttcatcactcgcgaggcgaggacaactactcgctaaggcgagcgatgaatgtcagctcggacagaa-tgcagattttctcaaaa 60727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 19678 - 20005
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttct-taaaactcatcaaatc 99  Q
    ||||||||||||| || ||||| |||||| |||||| || ||||||||||||||||||||| |||||||| ||||  |||| |  |||||||| | ||||    
T  19678 gaagttcatcactagcaaggcgggatcagctactcgctacggcgagcgatgaatgtcagctcgggcagaa-tgcaatttttatcaaaaactcacccaatc 19776  T
Q  100 caattgttctaaccttaaaactgattctaatcattgttctatgaatagcc-----taaggtctggacactaattctacatcaatttaacaggtttctact 194  Q
    | || |||||||||||||||||||||||||||||||||||| |||||| |     |||||||||||||||| ||||||||||||| |||| ||| |||||    
T  19777 ccatggttctaaccttaaaactgattctaatcattgttctacgaatagtctaaggtaaggtctggacactatttctacatcaattcaacaagttcctact 19876  T
Q  195 cttaattgatcaattctccaacttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttag 294  Q
    ||||||| ||||||||||||||||| | ||||||||| |||||  || |||||||| |||||||| |||||||||||||| |||||||||||  ||||||    
T  19877 cttaattaatcaattctccaactttaaccctaattctcaaatc--cccaaactacaacctacaacttgttaaatccaattttcagaattataacacttag 19974  T
Q  295 aattaaagaaggttagtcccacccttacctt 325  Q
    ||||| |||| ||||||||||||||||||||    
T  19975 aattagagaaagttagtcccacccttacctt 20005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 41 - 322
Target Start/End: Original strand, 96167 - 96446
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgttctaaccttaaaactgattctaatcattgttct 139  Q
    ||||||||||||||||||||| || |||||| ||||||||||| |||| | || | ||||| || ||||||||||||||||||||||||||||| |||||    
T  96167 ggcgagcgatgaatgtcagctcggacagaat-gcagattttctcaaaaattcacccaatcccatggttctaaccttaaaactgattctaatcatggttct 96265  T
Q  140 atgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaacctaattcttaaatcct 239  Q
    |||||||| |||||||||||||| || ||||||||||||| ||||| ||   |||||||||| |||||||||||||||||||||||||||||  ||||||    
T  96266 atgaatagtctaaggtctggacattatttctacatcaattcaacagattctcactcttaattaatcaattctccaacttttaacctaattctccaatcct 96365  T
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
     |||||||||| |||||||| |||||||||| ||| ||||||| |||||||| ||||||| |||| |||||||||||| ||||    
T  96366 -caaaactacaacctacaacttgttaaatcc-attttcagaatcatacaactcagaattagagaaagttagtcccacctttac 96446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 108; Significance: 4e-54; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 108 - 322
Target Start/End: Original strand, 110009 - 110222
Alignment:
Q  108 ctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaa 207  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| || ||||||||||||| ||||| || |||||||||||| |||||    
T  110009 ctaaccttaaaactgattctaatcattgttctatgaataacctaaggtttggacattatttctacatcaattcaacagattcctactcttaattaatcaa 110108  T
Q  208 ttctccaact-tttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaagg 306  Q
    || |||||||  | |||||||| || |||||| ||||||||||| |||||||| |||||||| ||||| |||||||||||  ||||||||||| |||| |    
T  110109 tt-tccaactcctaaacctaatcctcaaatcc-ccaaaactacaacctacaacttgttaaattcaattttcagaattatatcacttagaattagagaaag 110206  T
Q  307 ttagtcccacccttac 322  Q
    |||||| |||||||||    
T  110207 ttagtctcacccttac 110222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 328376 - 328289
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttaga--attaaagaaggttagtcccacccttacctt 325  Q
    |||| |||||||  || ||||||| ||||  ||||| ||||||||||||||||||||  |||| |||| ||||||||||||||||||||    
T  328376 tccataactacaatcttcaacatgctaaactcaatt-tcagaattatacaacttagagaattagagaaagttagtcccacccttacctt 328289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 129
Target Start/End: Complemental strand, 204662 - 204542
Alignment:
Q  9 tcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgtt 107  Q
    |||||||||||||||||  || ||||||    || ||||||||||||||||   ||||||| |||||| |||||| |||| | || | || || || |||    
T  204662 tcactcgcgaggcgagacgagctactcgcggaggtgagcgatgaatgtcagtacgggcaga-ttgcagtttttctcaaaaattcacccaaacccatggtt 204564  T
Q  108 ctaaccttaaaactgattctaa 129  Q
    ||||||||||||||||||||||    
T  204563 ctaaccttaaaactgattctaa 204542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 41 - 340
Target Start/End: Original strand, 15042 - 15338
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcattgttcta 140  Q
    ||||||||||||||||||||| || |||||||||||||||||| ||||||||   ||||   | |||| ||| | ||||||||||||||  |||||||||    
T  15042 ggcgagcgatgaatgtcagctcggacagaattgcagattttctcaaaactcactcaatctcttggttccaacatcaaaactgattctaagaattgttcta 15141  T
Q  141 tgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaacttttaacctaattcttaaatcctc 240  Q
    ||||||| |||||| |||||||||| |||||||||||| |||| | ||  |  |||||||| |||||||||||| | |||||||||||||| |||  ||     
T  15142 tgaatagtctaaggactggacactatttctacatcaatctaaccgattattcatcttaattcatcaattctccatc-tttaacctaattctcaaactct- 15239  T
Q  241 caaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    ||||| ||| |||  | || |||||||| | ||| ||||||| |||||||||||||||| |||| |||||||||||||||||||| ||| ||||| ||||    
T  15240 caaaattacctccctctacttgttaaat-ctattttcagaataatacaacttagaattagagaaagttagtcccacccttaccttagtaatgatgatcgg 15338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 107 - 325
Target Start/End: Complemental strand, 135721 - 135505
Alignment:
Q  107 tctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa-ttgatc 205  Q
    |||||||  ||||||||||||||||||||| ||||||||   |||||||||| |||||| ||||||||||||| ||||| |||||||| |||| || | |    
T  135721 tctaaccccaaaactgattctaatcattgtactatgaatcatctaaggtctgaacactatttctacatcaattcaacagatttctactattaaattaacc 135622  T
Q  206 aattctccaacttttaac-ctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaa 304  Q
    ||||   |||||| |||| |||||||  |||| | ||||||||||| |||||||| |||||||| ||||| |||||||||||| |||||||||||  |||    
T  135621 aattt--caacttctaactctaattcccaaattc-ccaaaactacaacctacaacctgttaaattcaattttcagaattatac-acttagaattagtgaa 135526  T
Q  305 ggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||    
T  135525 ggttagtcccacccttacctt 135505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 325
Target Start/End: Complemental strand, 1377 - 1059
Alignment:
Q  8 atcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagctt---gggcagaattgcagattttcttaaaactcatcaaatccaatt 104  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||||||| |    ||||||||| | || |||    |||||||| | ||| |  |     
T  1377 atcactcgcgaggcgagaacagttactcgctatggcgagcgatggatgtcagttctacgggcagaatgg-agttttcaacaaaactcacctaattccgta 1279  T
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgat 204  Q
      ||||||||||||| ||||| ||||||||||||||||||||   ||||||||||||| || ||||||||||||| ||||| ||||||||||||| | |     
T  1278 actctaaccttaaaagtgattataatcattgttctatgaataatgtaaggtctggacattatttctacatcaattcaacagatttctactcttaaatcaa 1179  T
Q  205 caattctccaacttttaa-cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaaga 303  Q
    | | | | |||||| ||| ||||| ||  |||| || ||||||| || |||||||| |||||||| ||||| |||||||||||  ||||||||| | |||    
T  1178 ctaat-tacaacttctaaccctaaatcccaaattct-caaaactccaacctacaacttgttaaattcaattttcagaattataacacttagaataagaga 1081  T
Q  304 aggttagtcccacccttacctt 325  Q
    | ||||||||||||||||||||    
T  1080 aagttagtcccacccttacctt 1059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 116 - 274
Target Start/End: Complemental strand, 718 - 561
Alignment:
Q  116 aaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaattctccaa 215  Q
    ||||||| ||||||||||||| ||||||| |  |||||||||| ||| |  |||| ||| |||| ||| |||| | |||||||||| ||| |||||||||    
T  718 aaaactggttctaatcattgtactatgaacaatctaaggtctgaacattgtttcttcattaattcaacgggttcccactcttaattaatcgattctccaa 619  T
Q  216 cttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaatt 274  Q
     ||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  618 attttaacctaattctcaaatcct-caaaactacaacctacaacatgttaaatccaatt 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 325
Target Start/End: Original strand, 8476 - 8693
Alignment:
Q  107 tctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatca 206  Q
    ||||||| |||||||||||||| ||||||| |||||||||  |||||||||| ||||   ||||||||||||| ||||| |||||||| |||| | | |     
T  8476 tctaaccctaaaactgattctagtcattgtactatgaataatctaaggtctgaacaccgtttctacatcaattcaacagatttctactattaaatcaacc 8575  T
Q  207 attctccaacttttaacc-taatt-cttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaa 304  Q
    | | | |||||| ||||| ||||| |  |||| | ||||||||||| |||||||| |||||||| ||||| ||||||| |||| |||||||||||  |||    
T  8576 aat-tacaacttctaaccctaatttcccaaattc-ccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtgaa 8672  T
Q  305 ggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||    
T  8673 ggttagtcccacccttacctt 8693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 325
Target Start/End: Original strand, 66958 - 67172
Alignment:
Q  110 aaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatcaatt 209  Q
    |||||||||||| ||||||||| ||||||||||||||  ||||||||| ||||||| ||||||||||||| ||||  ||  |||||||||   | | | |    
T  66958 aaccttaaaactaattctaatcgttgttctatgaataatctaaggtctagacactatttctacatcaattcaacaaatta-tactcttaaaccaaccaat 67056  T
Q  210 ctccaacttttaa-cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggtt 308  Q
     |||||||| ||| ||| ||||  |||| | | ||||||||| |||||||  |||||||||||||| |||||||||||| |||| |||||| |||| |||    
T  67057 ttccaacttctaaaccttattcccaaattc-ctaaaactacaacctacaatttgttaaatccaattttcagaattataccacttcgaattagagaaagtt 67155  T
Q  309 agtcccacccttacctt 325  Q
    ||||||||| |||||||    
T  67156 agtcccacctttacctt 67172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 66854 - 66898
Alignment:
Q  8 atcactcgcgaggcgagatcagttactcgttatggcgagcgatga 52  Q
    |||||||||||||||||| |||||||||| |||||||||||||||    
T  66854 atcactcgcgaggcgagagcagttactcgctatggcgagcgatga 66898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 7243 - 7328
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||| | |||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  7243 ccaaaactataacctacaacatgtcaaatccaattttcagaattatacaacttagaattaaagaatgttagtcccaccctcacctt 7328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 108127 - 108218
Alignment:
Q  107 tctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
    ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| | ||||||||||||    
T  108127 tctaaccttaaaactgattttaatcattgttctatgaataatctaaggtctggacactatttctacatcaattcaaca-gattctactcttaa 108218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 56331 - 56221
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| ||| | |  || ||||  ||| ||||||||    
T  56331 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaag-attattgaatgttagtcc 56233  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  56232 cacccttacctt 56221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 58; Significance: 3e-24; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 123 - 325
Target Start/End: Complemental strand, 3253 - 3053
Alignment:
Q  123 attctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactctt-aattgatcaattctccaactttta 221  Q
    |||||||||||||| |||||||||  ||||||| || ||||   ||||||||||||| ||||| |||||||  || |||  | |||||   |||||| ||    
T  3253 attctaatcattgtactatgaatactctaaggtttgtacacagtttctacatcaattcaacagatttctaccatttaatcaaccaatta--caacttcta 3156  T
Q  222 acc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||| |||||| ||||| | ||||||||||| |||||||| |||||||| ||||| ||||||| ||||| ||||||||||  |||||||||||||||||||    
T  3155 accctaattcctaaattc-ccaaaactacaacctacaacttgttaaattcaattttcagaataataca-cttagaattattgaaggttagtcccaccctt 3058  T
Q  321 acctt 325  Q
    |||||    
T  3057 acctt 3053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 135050 - 135160
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| ||| | |  || ||||  ||| ||||||||    
T  135050 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaag-attattgaatgttagtcc 135148  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  135149 cacccttacctt 135160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 137519 - 137629
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| ||| | |  || ||||  ||| ||||||||    
T  137519 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaag-attattgaatgttagtcc 137617  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  137618 cacccttacctt 137629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 139988 - 140098
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| ||| | |  || ||||  ||| ||||||||    
T  139988 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaag-attattgaatgttagtcc 140086  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  140087 cacccttacctt 140098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 142457 - 142567
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| ||| | |  || ||||  ||| ||||||||    
T  142457 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaag-attattgaatgttagtcc 142555  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  142556 cacccttacctt 142567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 144926 - 145036
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| ||| | |  || ||||  ||| ||||||||    
T  144926 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaag-attattgaatgttagtcc 145024  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  145025 cacccttacctt 145036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 11044 - 10895
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgttctaaccttaaaactgattctaatcattgttct 139  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||| | || | ||||  || ||||||||||||||||||||||||||||   | ||    
T  11044 ggcgagcgatgaatgtcagctcgggcagaat-gcagattttctcaaaaattcacccaatctcatggttctaaccttaaaactgattctaatcaccatcct 10946  T
Q  140 atgaatagcctaaggtctggacactaattctacatcaatttaacaggtttc 190  Q
    | ||||   |||||||||| |||| | ||||||||||||| ||||||||||    
T  10945 aggaattatctaaggtctgtacacaatttctacatcaattcaacaggtttc 10895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 109 - 189
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  109 aactacaacctacaacatgttaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 14938 - 15018
Alignment:
Q  255 acaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatg 335  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| | ||| ||||||||||||| ||||| |||||||||    
T  14938 acaacatgttaaatccaattttcagaattctacaacttagaattatataagtttagtcccaccctcaccttagtattgatg 15018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 16958 - 17038
Alignment:
Q  255 acaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatg 335  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| | ||| ||||||||||||| ||||| |||||||||    
T  16958 acaacatgttaaatccaattttcagaattctacaacttagaattatataagtttagtcccaccctcaccttagtattgatg 17038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 30838 - 31159
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttct-taaaactcatcaaatc 99  Q
    |||| ||||||||||||| |||||| ||| ||||||   |||||||| |||||||||||||  ||||||| ||||| ||||||  |||| ||| | |||     
T  30838 gaagatcatcactcgcgaagcgagaacagctactcgccgtggcgagcaatgaatgtcagctcaggcagaa-tgcagtttttctcaaaaattcacccaatt 30936  T
Q  100 caattgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaa 199  Q
    | || |||||||||||||||||||||||||||||  |  ||| |||   ||||||| || ||||   ||||| ||||||| ||||  |||| |   |  |    
T  30937 ccatggttctaaccttaaaactgattctaatcatcatcatatcaatcatctaaggtttgtacacagtttctatatcaattcaacaaatttccatcatcta 31036  T
Q  200 ttgatcaattctccaacttttaa-cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaatt 298  Q
     | | ||||| | |||||||||| ||||||||  ||||  ||| |||||||| |||||||| |||||||||||||| ||||||||| |  ||| ||||||    
T  31037 atcaacaatt-tacaacttttaaccctaattcccaaat--tcccaaactacaacctacaacttgttaaatccaattttcagaattaca-tactcagaatt 31132  T
Q  299 aaagaaggttagtcccacccttacctt 325  Q
    |  ||||||||||||||||||||||||    
T  31133 attgaaggttagtcccacccttacctt 31159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 325
Target Start/End: Complemental strand, 4792 - 4710
Alignment:
Q  243 aaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||| || |||||||| |||||||| ||||| |||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  4792 aaacttcaacctacaacttgttaaattcaattttcagaattatactacttagaattagagaaagttagtcccacccttacctt 4710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 323
Target Start/End: Complemental strand, 6788 - 6688
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    |||||||||| |||||  |||||||||||| ||||| || ||||||||||| || ||||||| |||||||||||||||| |||| |||||||||||||||    
T  6788 aacctaattcctaaatt-tccaaaactacaacctaccacctgttaaatccagtt-tcagaatcatacaacttagaattagagaaagttagtcccaccctt 6691  T
Q  321 acc 323  Q
    |||    
T  6690 acc 6688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 14787 - 14897
Alignment:
Q  215 acttttaacct-aattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    ||||||||||| |||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  14787 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 14885  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  14886 cacccttacctt 14897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 777 - 697
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||| ||||||    
T  777 aactacaacctacaacatgttaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccctacctt 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 1176 - 1256
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  1176 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 1256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 549 - 469
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  549 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 13477 - 13393
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| ||||||||||| ||||  ||||| ||||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  13477 ccaaaactacaacctacaacatgctaaactcaatt-tcagaattatacaacttggaattagagaaagttagtcccacccttacctt 13393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 78266 - 78186
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  78266 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 78186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 24212 - 24132
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  24212 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 24132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 30013 - 30122
Alignment:
Q  215 acttttaac-ctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    ||||||||| |||||||  |||||||| ||||||| | ||||||||||||||||| ||||| ||||||||| |  ||||||| |||  ||||||||||||    
T  30013 acttttaactctaattcccaaatcctc-aaaactaaa-cctacaacatgttaaatacaattttcagaattaaaacacttagatttattgaaggttagtcc 30110  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  30111 cacccttacctt 30122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 158622 - 158732
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  158622 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 158720  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  158721 cacccttacctt 158732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 21075 - 21163
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  21075 cctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgg 21163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 34090 - 34178
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  34090 cctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgg 34178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 58695 - 58797
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| | ||| ||||||| ||||||||||| ||||  ||||| |||||||| ||||||||||||||| |||| |||||||||||||||    
T  58695 aacctaattctcaaattc-ccataactacaacctacaacatgctaaactcaatt-tcagaattgtacaacttagaattagagaaagttagtcccaccctt 58792  T
Q  321 acctt 325  Q
    |||||    
T  58793 acctt 58797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 49; Significance: 6e-19; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 77636 - 77738
Alignment:
Q  221 aacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctt 320  Q
    ||||||||||| |||| | ||| ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||| |||||||    
T  77636 aacctaattctcaaattc-ccataactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcaccctt 77733  T
Q  321 acctt 325  Q
    |||||    
T  77734 acctt 77738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 162505 - 162413
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    |||||||||||||| ||||||  |||||||||||| |||||| ||||| |||   ||||| || |||||||||||||||||||||||||||||    
T  162505 ggcgagcgatgaatctcagctcaggcagaattgcatattttcataaaaatcactcaatcccatggttctaaccttaaaactgattctaatcat 162413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 31965 - 32045
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| |||| |||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  31965 aactacaacctataacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcacacccttacctt 32045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 37272 - 37352
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| |||| |||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  37272 aactacaacctataacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcacacccttacctt 37352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 498828 - 498869
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttct 83  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  498828 ggcgagcgatgaatgtcagctcgggcagaa-tgcagattttct 498869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 323
Target Start/End: Original strand, 2526 - 2604
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacc 323  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  2526 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacc 2604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 1797 - 1970
Alignment:
Q  6 tcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttct-taaaactcatcaaatccaatt 104  Q
    ||||| |||||||| ||||| ||| | |||| |  |||||||||||| |||||||| |||||||| ||||||||||||  |||| ||| | ||||| ||     
T  1797 tcatccctcgcgagccgagaccagctgctcgctgaggcgagcgatgactgtcagctcgggcagaa-tgcagattttctcaaaaattcacccaatcccatg 1895  T
Q  105 gttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatt 179  Q
    ||||||||||||||||| |||||||||||    ||||||||   |||||||||| ||||   |||||||||||||    
T  1896 gttctaaccttaaaactaattctaatcatcaacctatgaatcatctaaggtctgtacacagtttctacatcaatt 1970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 190
Target Start/End: Original strand, 3900 - 4085
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaat 103  Q
    |||||||||||||||||||||  || | |||| |  ||||||||||||||||||||| |||| || | |||| |||||| |||| | || | ||||| ||    
T  3900 ttcatcactcgcgaggcgagactagctgctcgctggggcgagcgatgaatgtcagctcgggctgact-gcagtttttctaaaaatttcacccaatcccat 3998  T
Q  104 tgttctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttc 190  Q
     |||||||||||| |||||||||||| |||  | ||||||||   ||||||| || |||| | ||||||||||||| ||||| ||||    
T  3999 ggttctaaccttagaactgattctaaacatcatcctatgaattatctaaggtttgtacacaatttctacatcaattcaacagttttc 4085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 107 - 325
Target Start/End: Complemental strand, 20300 - 20087
Alignment:
Q  107 tctaaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttctactcttaattgatca 206  Q
    |||||||  ||||||||||||||||||||||||||||||   ||||   ||  |||||| || ||||| |||| ||||| ||||||||||||| | | |     
T  20300 tctaaccccaaaactgattctaatcattgttctatgaatcatctaa---ctaaacactatttatacattaattcaacagatttctactcttaaatcaacc 20204  T
Q  207 attctccaacttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaag 305  Q
    |   | |||||| ||| | ||||||  ||||  ||| |||||| | |||||||| |||||||| ||||| |||||||||||| |||||||||||  ||||    
T  20203 aaattacaacttctaaacataattcccaaat--tcccaaactataacctacaacctgttaaattcaattttcagaattatac-acttagaattagtgaag 20107  T
Q  306 gttagtcccacccttacctt 325  Q
    ||||||||| ||||||||||    
T  20106 gttagtcccgcccttacctt 20087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 29654 - 29574
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||| ||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  29654 aactacaacctacgacatgctaaactcaatt-tcagaattatacaacttagaattatagaaagttagtcccacccttacctt 29574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 325
Target Start/End: Original strand, 21577 - 21662
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||  |||| |  ||||||||||| || || |||| |||||||||||||||| |||| | ||||||||||||||||||    
T  21577 tccaaaactacaagctaccatctgttaaatccagtt-tctgaatcatacaacttagaattagagaaagctagtcccacccttacctt 21662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 143582 - 143662
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  143582 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcacacccttacctt 143662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 169080 - 169000
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||| ||||||    
T  169080 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtcccacccctacctt 169000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 5007 - 5095
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| |||||||||| || || ||||||||| |  ||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  5007 cctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgg 5095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 5007 - 5095
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| |||||||||| || || ||||||||| |  ||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  5007 cctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgg 5095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 16570 - 16665
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatg 335  Q
    |||||||||||| ||||| |||||||||||||| || ||||||| |||||||||||||||| | ||  ||||||||||||||  ||| |||||||||    
T  16570 tccaaaactacaacctaccacatgttaaatccagtt-tcagaatcatacaacttagaattagataaatttagtcccaccctttgcttagtattgatg 16665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 340
Target Start/End: Complemental strand, 69927 - 69839
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| |||||||||| || || ||||||||| |  ||||||||||| |||| |||||||||||||||||||| ||||||||| ||||    
T  69927 cctacatcatgttaaattcagttttcagaattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgg 69839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 8938 - 9029
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcggtgg 343  Q
    |||||| |||||| ||| || || ||||||||| |  ||||||||||| |||| |||||||||||||||||||| ||||||||| |||||||    
T  8938 cctacatcatgttcaattcagttttcagaattaaaatacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggtgg 9029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 323
Target Start/End: Original strand, 5354 - 5432
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacc 323  Q
    ||||||| ||||||||||| ||||   |||| |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  5354 aactacaacctacaacatgctaaacttaatt-tcagaattatacaacttagaattagagaaagttagtcccacccttacc 5432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 12614 - 12534
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| |||| |||||| ||||  ||||| |||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  12614 aactacaacctataacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttattcccacccttacctt 12534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 120896 - 121005
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||||||| ||||||| | ||||||||||||||||| ||||| ||||||||| |  |||||||||||  ||||| ||||||    
T  120896 acttttaaccctaattcacaaatcctc-aaaactaaa-cctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcc 120993  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  120994 cacccttacctt 121005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 29289 - 29207
Alignment:
Q  253 ctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatg 335  Q
    ||||| ||||||||||||| || ||||||||| |  ||||||||||| |||| ||||||||||| |||||||| |||||||||    
T  29289 ctacatcatgttaaatccagttttcagaattaaaatacttagaattagagaaagttagtcccactcttaccttagtattgatg 29207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 34209 - 34122
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgttctaaccttaaaactgattctaa 129  Q
    ||||||||||||||||| |   ||||||| |||||| ||||||||||| | || | ||||| ||||||||||||||||||||||||||||    
T  34209 ggcgagcgatgaatgtctgtacgggcaga-ttgcag-ttttcttaaaaattcacccaatcccattgttctaaccttaaaactgattctaa 34122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 2107 - 2026
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctta 321  Q
    |||||||||||| ||||||||||||||||| ||||| ||| ||| |||| |||||||||||  |||||||| |||||||||||    
T  2107 tccaaaactacaacctacaacatgttaaattcaattttcaaaatcatac-acttagaattagtgaaggttaatcccaccctta 2026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 334
Target Start/End: Original strand, 1136 - 1225
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgat 334  Q
    ||||||| |||| |||||| ||||| ||||| ||||||||||||||||||||||||   || ||||||| |||||||||||| ||||||||    
T  1136 aactacaacctaaaacatgctaaattcaatt-tcagaattatacaacttagaattaggaaaagttagtcacacccttaccttagtattgat 1225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 340
Target Start/End: Original strand, 9029 - 9125
Alignment:
Q  242 aaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    ||||||||| |||||||| ||||||||||| || ||||||||| | | || |||||||  |||||||||||||||||||||||| ||||||||| ||||    
T  9029 aaaactacaacctacaacctgttaaatccagtt-tcagaattacata-ctcagaattactgaaggttagtcccacccttaccttagtattgatgatcgg 9125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 7498 - 7606
Alignment:
Q  215 acttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtccc 314  Q
    ||||||||||||||||  |||||||| ||||||| | | ||||||||||||||| || || ||||||||| |  |||||||||||  ||||| |||||||    
T  7498 acttttaacctaattcccaaatcctc-aaaactaaa-cttacaacatgttaaatacatttttcagaattaaaacacttagaattattgaaggctagtccc 7595  T
Q  315 acccttacctt 325  Q
    |||||||||||    
T  7596 acccttacctt 7606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 3)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 325
Target Start/End: Complemental strand, 4787 - 4715
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  4787 cctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtccgacccttacctt 4715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 5901 - 5821
Alignment:
Q  242 aaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    ||||||||| || ||||| ||| |||||||||| ||||||||| ||||||||||||||| ||| ||||||| ||| |||||    
T  5901 aaaactacaacccacaacctgtcaaatccaattttcagaattacacaacttagaattaaggaaagttagtctcacacttac 5821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 6019 - 5951
Alignment:
Q  124 ttctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacaggtttcta 192  Q
    ||||||||||||| |||||||||  |||||||||| |||||  |||| | | |||| ||||||||||||    
T  6019 ttctaatcattgtgctatgaataatctaaggtctgaacactgtttcttccttaattcaacaggtttcta 5951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 13502 - 13418
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| |||||||| |||||||| || || ||||||||| ||  ||||||||||  ||||||||||||||||||||||||    
T  13502 ccaaaactacaacctacaacttgttaaattcagttttcagaattaaacc-cttagaattattgaaggttagtcccacccttacctt 13418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 11355 - 11275
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||| ||||||||||||||||| |||| ||||||| ||||||||||||    
T  11355 aactacaacctacaacatgctaaactcaatt-tcagaaatatacaacttagaattagagaaagttagtctcacccttacctt 11275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 489 - 569
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| ||||||| |||||||||||||||| |||| ||||||| ||||||||||||    
T  489 aactacaacctacaacatgctaaactcaatt-tcagaatgatacaacttagaattagagaaagttagtctcacccttacctt 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 3153 - 3233
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||  ||||  ||||| |||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  3153 aactacaacctacaacatactaaagtcaatt-tcagaattatacaacttagaattagagaaagttagtccaacccttacctt 3233  T

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Target: scaffold0205 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 325
Target Start/End: Original strand, 30632 - 30705
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||| ||||| ||||||||| |  |||||||||||  ||||||||||| ||||||||||||    
T  30632 cctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggttagtctcacccttacctt 30705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 17990 - 17941
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  17990 tcagaattatacaacttagaattagagaaagttagtcccacccttacctt 17941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 28414 - 28330
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| |||||||| |||||||||||||| ||||||| |||  ||| |||||||  ||||| ||||||||||||||||||    
T  28414 ccaaaactacaacctacaacttgttaaatccaattttcagaatcata-tactcagaattattgaagggtagtcccacccttacctt 28330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 325
Target Start/End: Original strand, 35469 - 35541
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  35469 cctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcacccttacctt 35541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 325
Target Start/End: Complemental strand, 5118 - 5046
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||| ||||||||||| || ||| ||| |||||||||||||||| |||| ||||||||||||||||||||    
T  5118 cctacaacttgttaaatccagtt-tcacaatcatacaacttagaattagagaaagttagtcccacccttacctt 5046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 325
Target Start/End: Complemental strand, 10828 - 10756
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||| ||||||||||| || ||| ||| |||||||||||||||| |||| ||||||||||||||||||||    
T  10828 cctacaacctgttaaatccagtt-tcacaatcatacaacttagaattagagaaagttagtcccacccttacctt 10756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 1915 - 2006
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcggtgg 343  Q
    |||||| |||||||||| |  || ||||||||| |  ||||||||||| | || ||||||||||||||| |||| ||||||||| |||||||    
T  1915 cctacatcatgttaaataccgttttcagaattaaaatacttagaattagataaagttagtcccaccctttccttagtattgatgatcggtgg 2006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 325
Target Start/End: Original strand, 27955 - 28028
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||| ||||| ||||||||| |  |||||||||||  ||||| ||||||||||||||||||    
T  27955 cctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacctt 28028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 325
Target Start/End: Original strand, 42813 - 42886
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||| ||||| ||||||||| |  |||||||||||  ||||| ||||||||||||||||||    
T  42813 cctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacctt 42886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 146694 - 146774
Alignment:
Q  244 aactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||| ||||||||||| ||||  ||||| |||||||||||||||||||||||| || | ||||||||||||| ||||||    
T  146694 aactacaacctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagtaagttagtcccacccatacctt 146774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 158907 - 158823
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| |||||||| |||||||||||||| | ||||| |||  ||| |||||||  ||||||||||||||||||||||||    
T  158907 ccaaaactacaacctacaacttgttaaatccaatttttagaatcata-tactcagaattattgaaggttagtcccacccttacctt 158823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 5335 - 5417
Alignment:
Q  241 caaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||  ||||| |||||||||| ||||| ||||||| ||||| ||||||||||  ||||||||||||||||||||||||    
T  5335 caaaactacaatctaca-catgttaaattcaattttcagaatcataca-cttagaattagtgaaggttagtcccacccttacctt 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 11596 - 11504
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    |||||||||||||| ||||||  |||||||  |||||| ||| ||||| ||| | ||||| || |||||| ||||||||||||||||||||||    
T  11596 ggcgagcgatgaatctcagctcaggcagaaacgcagatgttcataaaaatcacccaatcccatggttctatccttaaaactgattctaatcat 11504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 15996 - 15904
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    |||||||||||||| ||||||  |||||||  |||||| ||| ||||| ||| | ||||| || |||||| ||||||||||||||||||||||    
T  15996 ggcgagcgatgaatctcagctcaggcagaaacgcagatgttcataaaaatcacccaatcccatggttctatccttaaaactgattctaatcat 15904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 24923 - 25015
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    |||||||||||||| |||||| |||||||||  ||||||||| ||||| ||| | ||||| || ||||||  | |||||||||||||||||||    
T  24923 ggcgagcgatgaatctcagctcgggcagaatcccagattttcataaaaatcacccaatcccatggttctattcataaaactgattctaatcat 25015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 35793 - 35885
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    |||||||||||||| |||||| |||||||||  ||||||||| ||||| ||| | ||||| || ||||||  | |||||||||||||||||||    
T  35793 ggcgagcgatgaatctcagctcgggcagaatcccagattttcataaaaatcacccaatcccatggttctattcataaaactgattctaatcat 35885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 79029 - 79100
Alignment:
Q  253 ctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  79029 ctacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcacccttacctt 79100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 6782 - 6892
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||| |||| ||| ||||||| | ||||||||||||||||||||||| ||||||||| |  |||||  ||||  ||| |||||||     
T  6782 acttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatta-atgacttaagattattgaatgttagtct 6880  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  6881 cacccttacctt 6892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 318
Target Start/End: Complemental strand, 1917 - 1855
Alignment:
Q  255 acaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccc 318  Q
    |||||||||||||| ||||| |||||||||||| ||||||||||| |||| |||||||||||||    
T  1917 acaacatgttaaattcaatt-tcagaattataccacttagaattagagaaagttagtcccaccc 1855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 21588 - 21698
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||| |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  21588 acttttaaccctaattctcaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 21686  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  21687 cacccttacctt 21698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 343
Target Start/End: Complemental strand, 21851 - 21760
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcggtgg 343  Q
    |||||| ||||||||||||| || ||| | ||| |  ||||||||||| |||| |||||||||| ||||||||| ||||||||| |||||||    
T  21851 cctacatcatgttaaatccagttttcaaatttaaaatacttagaattagagaaagttagtcccatccttaccttagtattgatgatcggtgg 21760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 172390 - 172299
Alignment:
Q  42 gcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    ||||||||||||| |||||| ||||| ||  ||| |||||| ||||| ||| | ||||| || |||||| ||||||||||||||||||||||    
T  172390 gcgagcgatgaatctcagctggggcataaacgcatattttcataaaaatcacccaatcccatggttctatccttaaaactgattctaatcat 172299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 16276 - 16384
Alignment:
Q  215 acttttaacctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtccc 314  Q
    ||||||||||||||||  |||| ||| ||||||| | ||||||||||||||||  ||||| ||||||| ||| | ||||  ||||| ||| |||||||||    
T  16276 acttttaacctaattcccaaattctcaaaaactaaa-cctacaacatgttaaaggcaattttcagaataataga-cttaagattaatgaatgttagtccc 16373  T
Q  315 acccttacctt 325  Q
    |||||||||||    
T  16374 acccttacctt 16384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 19209 - 19255
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||    
T  19209 tcagaattatacaacttagaattagagaaagttagtcccacccttac 19255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 247 - 325
Target Start/End: Complemental strand, 21871 - 21794
Alignment:
Q  247 tacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| ||||||||||| ||||| ||||| |||||| ||||||||||||||||| ||||  ||||||||||| |||||||    
T  21871 tacaacctacaacatgctaaattcaatt-tcagaactatacaacttagaattagagaaatttagtcccaccattacctt 21794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 106137 - 106052
Alignment:
Q  239 tccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||  |||| || ||||||||||| || || |||| |||||||||||||||| |||| ||||||| ||||||||||||    
T  106137 tccaaaactacagtctaccacctgttaaatccagtt-tccgaatcatacaacttagaattagagaaagttagtcacacccttacctt 106052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13992 - 14072
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttc 82  Q
    |||||| ||||||||||||||||||   | ||||||  | |||||||||||||| |||||| |||||||| |||||||||||    
T  13992 gaagttaatcactcgcgaggcgagaaatgctactcgcgagggcgagcgatgaatttcagctcgggcagaa-tgcagattttc 14072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 13125 - 13034
Alignment:
Q  233 aaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||||||||||||||    
T  13125 aaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcccacccttacctt 13034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 727 - 812
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattc 126  Q
    |||||||||||||| |||||| |||||||||||||||||||| ||||| ||| | ||||   | |||||||||| |||| ||||||    
T  727 ggcgagcgatgaatttcagctcgggcagaattgcagattttcataaaattcacctaatcacttggttctaacctcaaaattgattc 812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 2250 - 2201
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  2250 tcagaattatacaacttagaattagagaaaattagtcccacccttacctt 2201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 4177 - 4093
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagatttt-cttaaaactcatcaaatccaattgttctaaccttaaaactgatt 125  Q
    ||||||||||||||||||||| |||||||| |||||||||| | ||||| ||||| ||||  ||  ||||||||||||||||||||    
T  4177 ggcgagcgatgaatgtcagctcgggcagaa-tgcagattttccctaaaagtcatctaatctcatgtttctaaccttaaaactgatt 4093  T

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Target: scaffold0379; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 14171 - 14087
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttctt-aaaactcatcaaatccaattgttctaaccttaaaactgatt 125  Q
    |||||||||||||||||||||  |||||||| ||||||||||   |||| ||||| ||||  ||  ||||||||||||||||||||    
T  14171 ggcgagcgatgaatgtcagctcaggcagaat-gcagattttccccaaaagtcatctaatctcatgtttctaaccttaaaactgatt 14087  T

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Target: scaffold0282 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 17616 - 17528
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttc-ttaaaactcatcaaatccaattgttctaaccttaaaactgattctaa 129  Q
    ||||||||||||||||||||| |||||||| |||||||||||   ||||  |||||||||  || ||||||| |||||||||||||||||    
T  17616 ggcgagcgatgaatgtcagctcgggcagaa-tgcagattttcacgaaaatgcatcaaatcacatggttctaagcttaaaactgattctaa 17528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 5757 - 5712
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccaccctta 321  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  5757 tcagaattatacaacttagaattagagaaagttagtcccaccctta 5712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 81534 - 81618
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| |||||||| |||||||| ||||| | ||||| || ||  |||||||||  ||||||||||||||||||||||||    
T  81534 ccaaaactacaacctacaacctgttaaattcaatttttagaatcatccat-ttagaattagtgaaggttagtcccacccttacctt 81618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 113053 - 112971
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattct-cagaattatacaacttagaattaaagaaggttagtcccaccctta 321  Q
    |||||| |||| |||||||| |||||||| ||||| | |||| |||||  ||||||||||| |||| ||||||||||||||||    
T  113053 ccaaaattacaacctacaacttgttaaattcaatttttcagagttatatcacttagaattagagaaagttagtcccaccctta 112971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 117878 - 117808
Alignment:
Q  256 caacatgttaaatccaattct-cagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||| |||||||| ||||| | |||| |||||  ||||||||||| |||| ||||||||||||||||||||    
T  117878 caacttgttaaattcaatttttcagagttatatcacttagaattagagaaagttagtcccacccttacctt 117808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 61898 - 61849
Alignment:
Q  276 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  61898 tcagaattatacaacttagaattagagaaagttagtctcacccttacctt 61849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 325
Target Start/End: Original strand, 21673 - 21746
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||| ||||| ||| ||||| |  |||||||||||  ||||| ||||||||||||||||||    
T  21673 cctacaacatgttaaatacaattttcaaaattaaaacacttagaattattgaaggctagtcccacccttacctt 21746  T

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Target: scaffold0058 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 6346 - 6434
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||| ||||| ||||||| || ||| ||||| |  ||||||||||| |||| ||||||||||||||||| || ||||||||| ||||    
T  6346 cctacatcatgtcaaatccagttttcaaaattaaaatacttagaattagagaaagttagtcccacccttacattagtattgatgatcgg 6434  T

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Target: scaffold0859 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 4520 - 4595
Alignment:
Q  110 aaccttaaaactgattctaatcattgttctatgaatagcctaaggtctggacactaattctacatcaatttaacag 185  Q
    |||| ||||||||||| ||| ||||   |||||||||  |||||||||| |||||||||||||||||||| |||||    
T  4520 aaccctaaaactgattataaacattacactatgaataatctaaggtctgaacactaattctacatcaattcaacag 4595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 325
Target Start/End: Complemental strand, 5353 - 5306
Alignment:
Q  278 agaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  5353 agaattatacaacttaaaattagagaaagttagtcccacccttacctt 5306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 38659 - 38769
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  38659 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 38757  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  38758 cacccttacctt 38769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 26705 - 26638
Alignment:
Q  255 acaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    |||||||| ||||  ||||| ||||||||||||||| || |||||||||| |||| ||||||||||||    
T  26705 acaacatgctaaactcaattttcagaattatacaacctaaaattaaagaaagttaatcccacccttac 26638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 22040 - 22141
Alignment:
Q  215 acttttaac-ctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    ||||||||| |||||||  |||||||| ||||||| | ||||||||||||||||| ||||| ||||||||| |  |||||||||||  ||||| ||||||    
T  22040 acttttaactctaattcccaaatcctc-aaaactaaa-cctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcc 22137  T
Q  314 cacc 317  Q
    ||||    
T  22138 cacc 22141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Complemental strand, 39063 - 38953
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||| |||| ||  ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  39063 acttttaaccctaattctcaaattctaaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 38965  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  38964 cacccttacctt 38953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 12127 - 12237
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||| |||| ||| ||||| | | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  12127 acttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 12225  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  12226 cacccttacctt 12237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 95248 - 95358
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  95248 acttttaaccctaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 95346  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  95347 cacccttacctt 95358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1551 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1551
Description:

Target: scaffold1551; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 231 - 155
Alignment:
Q  6 tcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttct 83  Q
    |||||||||||||||||||   || | |||| |  ||||||||||||||||||||| |||||||||| ||||||||||    
T  231 tcatcactcgcgaggcgaggctagctgctcgctggggcgagcgatgaatgtcagctcgggcagaatt-cagattttct 155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 35549 - 35465
Alignment:
Q  240 ccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| |||||||  |||||||| ||||| ||||||| |||  ||| ||||||||  ||||||||||||| |||||||||    
T  35549 ccaaaactacaacctacaagttgttaaattcaattttcagaatcata-tactcagaattaataaaggttagtcccatccttacctt 35465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 75306 - 75218
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttc-ttaaaactcatcaaatccaattgttctaaccttaaaactgattctaa 129  Q
    ||||||||||||||||||||| |||||||| |||||||||||   ||||  || | ||||  || |||||||||||||||||||||||||    
T  75306 ggcgagcgatgaatgtcagctcgggcagaa-tgcagattttcacgaaaatgcacctaatcacatggttctaaccttaaaactgattctaa 75218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 322
Target Start/End: Original strand, 7874 - 7981
Alignment:
Q  215 acttttaacct-aattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    ||||||||||| |||||  |||| ||| ||||||| | ||||||||||||||||||||||| | ||||| |||  |||||  ||||  ||| ||||||||    
T  7874 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttttagaatcata-gacttaagattattgaatgttagtcc 7972  T
Q  314 cacccttac 322  Q
    |||||||||    
T  7973 cacccttac 7981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 420 - 488
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    |||||||||| ||||||| |||| ||| ||||| | | ||||||||||||||||||||||| |||||||    
T  420 acttttaaccctaattctgaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaat 488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 12397 - 12314
Alignment:
Q  42 gcgagcgatgaatgtcagcttgggcagaattgcagattttct-taaaactcatcaaatccaattgttctaaccttaaaactgatt 125  Q
    |||||||||||||||||||| |||||||| |||| |||||||  |||| ||||| ||||  ||  ||||||||||||||||||||    
T  12397 gcgagcgatgaatgtcagctcgggcagaa-tgcatattttctccaaaagtcatccaatctcatgtttctaaccttaaaactgatt 12314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 22926 - 23037
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttaga-attaaagaaggttagtc 312  Q
    |||||||||| ||||||  |||| ||| ||||||| | ||||||||||||||||||||||| | ||||| |||  ||||| | ||||  ||| |||||||    
T  22926 acttttaaccctaattcccaaattctcaaaaactataacctacaacatgttaaatccaatttttagaatcata-gacttaaagattattgaatgttagtc 23024  T
Q  313 ccacccttacctt 325  Q
    |||||||||||||    
T  23025 ccacccttacctt 23037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 322
Target Start/End: Complemental strand, 5433 - 5326
Alignment:
Q  215 acttttaacct-aattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    ||||||||||| |||||  |||| ||| ||||||| | ||||||||||||||||||||||| | ||||| |||  |||||  ||||  ||| ||||||||    
T  5433 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttttagaatcata-gacttaagattattgaatgttagtcc 5335  T
Q  314 cacccttac 322  Q
    |||||||||    
T  5334 cacccttac 5326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 7525 - 7583
Alignment:
Q  223 cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    ||||||||| |||| ||| ||||||| | ||||||||||||||||| |||||||||||||    
T  7525 cctaattctcaaattctcaaaaactaaa-cctacaacatgttaaatacaattctcagaat 7583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 14231 - 14341
Alignment:
Q  215 acttttaacc-taattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    |||||||||| ||||||| |||| ||| ||||| | | ||||||||||||||||||||||| | ||||| | |  |||||  ||||  ||| ||||||||    
T  14231 acttttaaccctaattctcaaattctcaaaaacgaaaacctacaacatgttaaatccaattttgagaatca-atgacttaagattattgaatgttagtcc 14329  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  14330 cacccttacctt 14341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 10092 - 10151
Alignment:
Q  223 cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaat 282  Q
    ||||||||| |||| ||| ||||| | | ||||||||||||||||||||||| |||||||    
T  10092 cctaattctcaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaat 10151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 325
Target Start/End: Original strand, 19757 - 19804
Alignment:
Q  278 agaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||| |||| || |||| ||||||||||||    
T  19757 agaattatacaacttagaattagagaaagtcagtctcacccttacctt 19804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 325
Target Start/End: Original strand, 41237 - 41347
Alignment:
Q  215 acttttaacct-aattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcc 313  Q
    ||||||||||| |||||  |||| ||| ||||| | | ||||||||||||||||||||||| ||||||| | |  |||||  ||||  ||| ||||||||    
T  41237 acttttaaccttaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatca-atgacttaagattattgaatgttagtcc 41335  T
Q  314 cacccttacctt 325  Q
    ||||||||||||    
T  41336 cacccttacctt 41347  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 323
Target Start/End: Original strand, 126773 - 126840
Alignment:
Q  256 caacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacc 323  Q
    ||||||||||||| ||||| ||||||||| |  |||||||||||   |||| ||||||||||||||||    
T  126773 caacatgttaaatacaattttcagaattaaaacacttagaattatttaaggctagtcccacccttacc 126840  T

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Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 33476 - 33505
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  33476 attaaagaaggttagtcccacccttacctt 33505  T

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Target: scaffold0780 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 2762 - 2713
Alignment:
Q  33 ctcgttatggcgagcgatgaatgtcagcttgggcagaattgcagattttct 83  Q
    |||| |||||||||||||||||||||||| ||||| || ||||||||||||    
T  2762 ctcgctatggcgagcgatgaatgtcagctcgggcataa-tgcagattttct 2713  T

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Target: scaffold0500 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 10987 - 10902
Alignment:
Q  44 gagcgatgaatgtcagcttgggcagaattgcagattttcttaaaact-catcaaatccaattgttctaaccttaaaactgattctaa 129  Q
    |||||||||||||  |  |||||||| |||||| |||||| |||| | || | ||||| ||||||||||||||||||||||||||||    
T  10987 gagcgatgaatgtatgtatgggcaga-ttgcagtttttctcaaaaattcacccaatcccattgttctaaccttaaaactgattctaa 10902  T

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Target: scaffold0452 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 12696 - 12626
Alignment:
Q  252 cctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttac 322  Q
    ||||||||||||||||| ||||| ||||||||| |  |||||||||||  ||||| |||| | ||||||||    
T  12696 cctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagttctacccttac 12626  T

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Target: scaffold0394 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 325
Target Start/End: Complemental strand, 7545 - 7515
Alignment:
Q  295 aattaaagaaggttagtcccacccttacctt 325  Q
    |||||||||||||||||||||||||||||||    
T  7545 aattaaagaaggttagtcccacccttacctt 7515  T

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Target: scaffold0153 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 5325 - 5363
Alignment:
Q  302 gaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  5325 gaaggttagtcccacccttaccttagtattgatgatcgg 5363  T

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Target: scaffold0153; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 340
Target Start/End: Original strand, 12345 - 12383
Alignment:
Q  302 gaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  12345 gaaggttagtcccacccttaccttagtattgatgatcgg 12383  T

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Target: scaffold0112 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 325
Target Start/End: Original strand, 2871 - 2940
Alignment:
Q  255 acaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctt 325  Q
    |||||||| ||||  ||||| ||||||||||||||| || ||||| |||| |||| |||||||||||||||    
T  2871 acaacatgctaaactcaatt-tcagaattatacaacctaaaattagagaaagttaatcccacccttacctt 2940  T

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Target: scaffold1939 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 149 - 178
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  149 attaaagaaggttagtcccacccttacctt 178  T

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Target: scaffold1800 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 629 - 658
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  629 attaaagaaggttagtcccacccttacctt 658  T

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Target: scaffold1695 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 1144 - 1189
Alignment:
Q  11 actcgcgaggcgagatcagttactcgttatggcgagcgatgaatgt 56  Q
    |||||||||||||||  | ||||||| |||||||||||||||||||    
T  1144 actcgcgaggcgagaggaattactcgctatggcgagcgatgaatgt 1189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 1389 - 1360
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  1389 attaaagaaggttagtcccacccttacctt 1360  T

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Target: scaffold1128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 466 - 510
Alignment:
Q  241 caaaactacatcctacaacatgttaaatccaattctcagaattata 286  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||    
T  466 caaaactataacctacaacatgttaaatccaatt-tcagaattata 510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 9085 - 9114
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  9085 attaaagaaggttagtcccacccttacctt 9114  T

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Target: scaffold0439 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 4443 - 4472
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  4443 attaaagaaggttagtcccacccttacctt 4472  T

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Target: scaffold0401 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 8843 - 8872
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  8843 attaaagaaggttagtcccacccttacctt 8872  T

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Target: scaffold0371 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 10476 - 10447
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  10476 attaaagaaggttagtcccacccttacctt 10447  T

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Target: scaffold0337 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 3226 - 3255
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  3226 attaaagaaggttagtcccacccttacctt 3255  T

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Target: scaffold0278 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 8673 - 8737
Alignment:
Q  223 cctaattcttaaatcctccaaaactacatcctacaacatgttaaatccaattctcagaattataca 288  Q
    ||||||||| |||| ||| ||||||| | ||||||||||||||||| ||||| ||||||| |||||    
T  8673 cctaattctcaaattctcaaaaactaaa-cctacaacatgttaaatacaattttcagaatcataca 8737  T

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Target: scaffold0174 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 13652 - 13701
Alignment:
Q  289 acttagaattaaagaaggttagtcccacccttacctttgtattgatggtc 338  Q
    |||||||||||  |||||||| ||||||||||||| | ||||||||||||    
T  13652 acttagaattattgaaggttactcccacccttaccgtagtattgatggtc 13701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 49751 - 49780
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  49751 attaaagaaggttagtcccacccttacctt 49780  T

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Target: scaffold0048 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Original strand, 56995 - 57024
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  56995 attaaagaaggttagtcccacccttacctt 57024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 9958 - 9929
Alignment:
Q  296 attaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||||||||||||||||||||||    
T  9958 attaaagaaggttagtcccacccttacctt 9929  T

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Target: scaffold0601 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 233 - 197
Alignment:
Q  289 acttagaattaaagaaggttagtcccacccttacctt 325  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  233 acttagaattagagaaagttagtcccacccttacctt 197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 340
Target Start/End: Original strand, 11209 - 11289
Alignment:
Q  260 atgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctttgtattgatggtcgg 340  Q
    |||||||||| | || ||||||||| |  |||| |||||| |||| ||||| | |||||||||||| ||||||||| ||||    
T  11209 atgttaaatctagttttcagaattaaaatacttggaattagagaaagttagactcacccttaccttagtattgatgatcgg 11289  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 13867 - 13792
Alignment:
Q  5 ttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtcagcttgggcagaattgcagatttt 81  Q
    ||||||||||||||||||| |   ||| |||| ||||||||||||||| ||  |||| |||||||| ||||||||||    
T  13867 ttcatcactcgcgaggcgaaaggtgttgctcgctatggcgagcgatgactgcaagctcgggcagaa-tgcagatttt 13792  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 42384 - 42336
Alignment:
Q  9 tcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtc 57  Q
    |||||||||||||||||   | ||||||||| |||||||||||||||||    
T  42384 tcactcgcgaggcgagacaggctactcgttagggcgagcgatgaatgtc 42336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 53079 - 53031
Alignment:
Q  9 tcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtc 57  Q
    |||||||||||||||||   | ||||||||| |||||||||||||||||    
T  53079 tcactcgcgaggcgagacaggctactcgttagggcgagcgatgaatgtc 53031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 209638 - 209730
Alignment:
Q  41 ggcgagcgatgaatgtcagcttgggcagaattgcagattttcttaaaactcatcaaatccaattgttctaaccttaaaactgattctaatcat 133  Q
    |||||||||||||| ||||||  |||||||  |||||||||| ||||| ||| | ||||| || ||| || |||||||  |||||| ||||||    
T  209638 ggcgagcgatgaatctcagctccggcagaaacgcagattttcataaaaatcaccgaatcccatggttatatccttaaatttgattcaaatcat 209730  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 307669 - 307725
Alignment:
Q  1 gaagttcatcactcgcgaggcgagatcagttactcgttatggcgagcgatgaatgtc 57  Q
    ||||||||||||||||||||||||||   || ||||   ||||||||||||||||||    
T  307669 gaagttcatcactcgcgaggcgagattcattgctcgccgtggcgagcgatgaatgtc 307725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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