View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10231_low_6 (Length: 241)
Name: NF10231_low_6
Description: NF10231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10231_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 3476872 - 3476644
Alignment:
| Q |
1 |
ccagatccccgagaacttggctgaagtatttaaaagcattcagtcatctcatccgactctcacgtatcacgagattaaccaaaacaaataaccatagagt |
100 |
Q |
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| T |
3476872 |
ccagatccccgagaacttggctgaagtatttaaaagcattcagtcatctcatccgactctcacgtatcacgagattaaccaaaacaaataaccatagagt |
3476773 |
T |
|
| Q |
101 |
atacaaacaatatacatcgtagattttaatatcataaaagaactgcaaattgcagaaaaattaatgtgaacaagtcatctaaactagtaatacccttaac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
3476772 |
atacaaacaatatacatcgtagattttaatatcataaaacaactgcaaattgcagaaaaattaatttgaacaagtcatctaaactagtaatacccttaac |
3476673 |
T |
|
| Q |
201 |
tccacatctcaagtactgcatctcatgat |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
3476672 |
tccacatctcaagtactgcatctcatgat |
3476644 |
T |
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