View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10232_low_1 (Length: 426)

Name: NF10232_low_1
Description: NF10232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10232_low_1
NF10232_low_1
[»] chr4 (53 HSPs)
chr4 (54-411)||(7009704-7010064)
chr4 (172-401)||(6992036-6992267)
chr4 (208-401)||(7036485-7036678)
chr4 (161-404)||(7044103-7044347)
chr4 (139-401)||(7017829-7018092)
chr4 (174-401)||(7000841-7001067)
chr4 (243-401)||(7025194-7025352)
chr4 (247-401)||(7051182-7051336)
chr4 (3-52)||(27384187-27384236)
chr4 (3-52)||(32365678-32365727)
chr4 (5-52)||(4511825-4511872)
chr4 (5-52)||(15515795-15515842)
chr4 (15-52)||(3475869-3475906)
chr4 (15-52)||(11012141-11012178)
chr4 (15-52)||(24088598-24088635)
chr4 (15-52)||(56557733-56557770)
chr4 (15-55)||(52430874-52430914)
chr4 (5-52)||(1868906-1868953)
chr4 (5-52)||(4974111-4974158)
chr4 (13-52)||(33093136-33093175)
chr4 (5-52)||(39241314-39241361)
chr4 (5-52)||(42490920-42490967)
chr4 (13-52)||(45764420-45764459)
chr4 (5-52)||(54036542-54036589)
chr4 (18-52)||(2313359-2313393)
chr4 (5-51)||(5386385-5386431)
chr4 (13-51)||(28676173-28676211)
chr4 (15-49)||(29973071-29973105)
chr4 (15-52)||(169536-169573)
chr4 (15-52)||(1796016-1796053)
chr4 (7-52)||(9827998-9828043)
chr4 (19-52)||(12074189-12074222)
chr4 (15-52)||(18880785-18880822)
chr4 (15-48)||(21152655-21152688)
chr4 (15-52)||(23220335-23220372)
chr4 (15-52)||(24772671-24772708)
chr4 (15-52)||(30973597-30973634)
chr4 (15-52)||(35017153-35017190)
chr4 (19-52)||(35661635-35661668)
chr4 (15-52)||(36444429-36444466)
chr4 (3-60)||(36871179-36871236)
chr4 (15-52)||(39010171-39010208)
chr4 (15-52)||(41609713-41609750)
chr4 (15-52)||(42853939-42853976)
chr4 (15-52)||(44272844-44272881)
chr4 (15-52)||(45521613-45521650)
chr4 (5-62)||(46686235-46686291)
chr4 (15-52)||(47014939-47014976)
chr4 (15-52)||(51160671-51160708)
chr4 (15-52)||(51359824-51359861)
chr4 (16-52)||(30042134-30042170)
chr4 (8-52)||(41119497-41119541)
chr4 (8-52)||(46173550-46173594)
[»] chr7 (34 HSPs)
chr7 (5-52)||(2323304-2323351)
chr7 (5-53)||(43444634-43444682)
chr7 (15-61)||(33050174-33050220)
chr7 (5-51)||(38547303-38547349)
chr7 (15-52)||(22692084-22692121)
chr7 (15-52)||(26153646-26153683)
chr7 (3-52)||(28862092-28862141)
chr7 (3-52)||(45420071-45420120)
chr7 (15-51)||(30818031-30818067)
chr7 (15-51)||(43171207-43171243)
chr7 (5-52)||(2469703-2469750)
chr7 (5-52)||(11352986-11353033)
chr7 (5-52)||(22330644-22330691)
chr7 (13-52)||(26041321-26041360)
chr7 (5-52)||(26749017-26749063)
chr7 (5-52)||(31785484-31785531)
chr7 (17-52)||(34992360-34992395)
chr7 (5-52)||(37352003-37352050)
chr7 (5-52)||(47078263-47078310)
chr7 (13-51)||(49025335-49025373)
chr7 (15-52)||(2347093-2347130)
chr7 (15-52)||(4971290-4971327)
chr7 (15-52)||(5068657-5068694)
chr7 (15-52)||(19426580-19426617)
chr7 (5-46)||(36990058-36990099)
chr7 (15-52)||(37392043-37392080)
chr7 (15-52)||(37856188-37856225)
chr7 (15-52)||(40693562-40693599)
chr7 (15-52)||(47530325-47530362)
chr7 (5-57)||(3937134-3937186)
chr7 (15-55)||(20406538-20406578)
chr7 (13-49)||(23680059-23680095)
chr7 (15-51)||(23910285-23910321)
chr7 (17-53)||(37832449-37832485)
[»] chr2 (33 HSPs)
chr2 (3-58)||(8482243-8482298)
chr2 (13-52)||(25086335-25086374)
chr2 (5-52)||(15141473-15141520)
chr2 (3-52)||(1095847-1095896)
chr2 (15-52)||(3299139-3299176)
chr2 (15-52)||(14713986-14714023)
chr2 (3-52)||(14891100-14891149)
chr2 (8-49)||(36175746-36175787)
chr2 (3-52)||(45202143-45202192)
chr2 (5-52)||(22353188-22353235)
chr2 (13-52)||(29795447-29795486)
chr2 (5-52)||(40700207-40700254)
chr2 (5-52)||(43725216-43725263)
chr2 (2-52)||(694280-694330)
chr2 (19-57)||(10749717-10749755)
chr2 (15-52)||(6666020-6666057)
chr2 (15-52)||(7498025-7498062)
chr2 (3-52)||(12191958-12192007)
chr2 (15-52)||(14255302-14255339)
chr2 (15-52)||(15123970-15124007)
chr2 (5-50)||(17264088-17264133)
chr2 (15-52)||(22303203-22303240)
chr2 (5-52)||(24361505-24361549)
chr2 (15-52)||(29168725-29168762)
chr2 (15-52)||(36909877-36909914)
chr2 (15-52)||(38821366-38821403)
chr2 (15-52)||(42075394-42075431)
chr2 (15-48)||(43621982-43622015)
chr2 (15-52)||(44050015-44050052)
chr2 (15-52)||(44189827-44189864)
chr2 (15-48)||(44484548-44484581)
chr2 (15-51)||(8087372-8087408)
chr2 (26-58)||(42340748-42340780)
[»] chr1 (42 HSPs)
chr1 (5-52)||(40139126-40139173)
chr1 (5-52)||(43612093-43612140)
chr1 (5-60)||(48325791-48325846)
chr1 (5-55)||(29264012-29264062)
chr1 (5-55)||(29293956-29294006)
chr1 (5-52)||(40596067-40596114)
chr1 (5-52)||(41507207-41507254)
chr1 (15-52)||(11947795-11947832)
chr1 (15-52)||(31184281-31184318)
chr1 (7-52)||(48872043-48872088)
chr1 (15-52)||(50017457-50017494)
chr1 (5-49)||(39780175-39780219)
chr1 (3-51)||(51571416-51571464)
chr1 (5-52)||(27687532-27687579)
chr1 (5-52)||(45272173-45272220)
chr1 (5-52)||(49453491-49453538)
chr1 (5-52)||(49589987-49590034)
chr1 (5-52)||(50781582-50781629)
chr1 (5-52)||(50797791-50797838)
chr1 (5-63)||(1690436-1690493)
chr1 (5-51)||(19969574-19969620)
chr1 (26-60)||(32811912-32811946)
chr1 (15-57)||(34395953-34395995)
chr1 (15-57)||(42256455-42256497)
chr1 (15-52)||(9011645-9011682)
chr1 (3-52)||(14983784-14983833)
chr1 (15-52)||(17167849-17167886)
chr1 (15-52)||(18610773-18610810)
chr1 (15-52)||(29706737-29706774)
chr1 (15-56)||(40238434-40238475)
chr1 (7-52)||(42539418-42539463)
chr1 (15-52)||(42843378-42843415)
chr1 (15-52)||(46947981-46948018)
chr1 (15-52)||(47386828-47386865)
chr1 (15-52)||(48872379-48872416)
chr1 (5-49)||(5477176-5477220)
chr1 (15-55)||(13489659-13489699)
chr1 (25-65)||(20016521-20016560)
chr1 (5-52)||(30196724-30196772)
chr1 (15-55)||(33076116-33076156)
chr1 (5-52)||(36954671-36954716)
chr1 (16-52)||(40612114-40612150)
[»] chr3 (34 HSPs)
chr3 (3-52)||(11056933-11056982)
chr3 (13-52)||(44937219-44937258)
chr3 (5-52)||(47683801-47683848)
chr3 (13-52)||(50876383-50876422)
chr3 (15-52)||(19418191-19418228)
chr3 (15-52)||(50652388-50652425)
chr3 (5-53)||(3484769-3484817)
chr3 (3-51)||(53871043-53871091)
chr3 (5-52)||(1337851-1337898)
chr3 (5-52)||(43169766-43169813)
chr3 (5-52)||(46952949-46952996)
chr3 (15-52)||(462435-462472)
chr3 (15-52)||(1402650-1402687)
chr3 (15-52)||(7867745-7867782)
chr3 (15-52)||(8254027-8254064)
chr3 (15-52)||(10811135-10811172)
chr3 (15-52)||(11327108-11327145)
chr3 (15-52)||(28300682-28300719)
chr3 (15-52)||(30400190-30400227)
chr3 (15-52)||(30580133-30580170)
chr3 (15-52)||(36869871-36869908)
chr3 (19-52)||(37134644-37134677)
chr3 (3-51)||(42718132-42718181)
chr3 (3-60)||(43460373-43460430)
chr3 (15-52)||(45528976-45529013)
chr3 (15-52)||(46315989-46316026)
chr3 (15-52)||(48287671-48287708)
chr3 (15-52)||(48405410-48405447)
chr3 (15-52)||(49196696-49196733)
chr3 (15-52)||(50280121-50280158)
chr3 (15-52)||(50559246-50559283)
chr3 (15-52)||(53392098-53392135)
chr3 (20-52)||(30633855-30633887)
chr3 (15-51)||(47101523-47101559)
[»] chr6 (19 HSPs)
chr6 (5-61)||(32644614-32644670)
chr6 (22-60)||(11635609-11635647)
chr6 (4-52)||(16328713-16328761)
chr6 (5-49)||(29467368-29467412)
chr6 (13-52)||(1897697-1897736)
chr6 (5-52)||(12441538-12441585)
chr6 (15-62)||(27334848-27334895)
chr6 (15-62)||(27395588-27395635)
chr6 (3-52)||(2822222-2822271)
chr6 (15-52)||(3339533-3339570)
chr6 (15-52)||(15666807-15666844)
chr6 (15-52)||(19789110-19789147)
chr6 (19-52)||(21857605-21857638)
chr6 (15-60)||(29376749-29376794)
chr6 (15-52)||(32729889-32729926)
chr6 (5-64)||(2060646-2060706)
chr6 (8-52)||(10375660-10375704)
chr6 (15-51)||(32621802-32621838)
chr6 (15-51)||(35077124-35077160)
[»] scaffold0054 (1 HSPs)
scaffold0054 (5-52)||(31613-31660)
[»] chr8 (34 HSPs)
chr8 (5-52)||(37392141-37392188)
chr8 (3-52)||(5502371-5502420)
chr8 (5-49)||(11138910-11138954)
chr8 (5-53)||(44103775-44103823)
chr8 (5-52)||(1796496-1796543)
chr8 (15-58)||(7598702-7598745)
chr8 (5-52)||(14233657-14233704)
chr8 (13-52)||(16487610-16487649)
chr8 (5-52)||(40413362-40413409)
chr8 (26-56)||(1775322-1775352)
chr8 (18-52)||(6161948-6161982)
chr8 (6-52)||(9047084-9047130)
chr8 (5-51)||(32020478-32020524)
chr8 (5-51)||(39211054-39211100)
chr8 (15-53)||(40604738-40604776)
chr8 (8-46)||(44330943-44330981)
chr8 (15-52)||(9985712-9985749)
chr8 (15-52)||(14531621-14531658)
chr8 (3-52)||(30925665-30925714)
chr8 (15-52)||(36497661-36497698)
chr8 (15-52)||(36969711-36969748)
chr8 (15-52)||(38844824-38844861)
chr8 (15-52)||(40380281-40380318)
chr8 (3-52)||(42569739-42569788)
chr8 (6-51)||(44607702-44607747)
chr8 (5-49)||(157070-157114)
chr8 (13-61)||(11789802-11789849)
chr8 (13-53)||(12732841-12732881)
chr8 (5-49)||(14710906-14710950)
chr8 (22-54)||(20852917-20852949)
chr8 (16-52)||(21273745-21273781)
chr8 (5-49)||(26000552-26000596)
chr8 (13-57)||(36874131-36874175)
chr8 (8-52)||(42689841-42689885)
[»] chr5 (21 HSPs)
chr5 (5-52)||(13734373-13734420)
chr5 (5-52)||(14206400-14206447)
chr5 (3-52)||(12878756-12878805)
chr5 (11-52)||(16143390-16143431)
chr5 (3-52)||(43153071-43153120)
chr5 (5-52)||(372733-372780)
chr5 (5-52)||(6865800-6865847)
chr5 (15-53)||(2629817-2629855)
chr5 (3-49)||(4098626-4098672)
chr5 (18-52)||(8897382-8897416)
chr5 (15-49)||(9065434-9065468)
chr5 (5-51)||(33910101-33910147)
chr5 (3-52)||(4835040-4835089)
chr5 (15-52)||(7144577-7144614)
chr5 (15-52)||(14914372-14914409)
chr5 (15-52)||(29803225-29803262)
chr5 (15-52)||(31708370-31708407)
chr5 (15-52)||(34428160-34428197)
chr5 (15-52)||(42699057-42699094)
chr5 (5-57)||(4434477-4434529)
chr5 (5-49)||(33567236-33567280)
[»] scaffold0154 (2 HSPs)
scaffold0154 (15-53)||(19725-19763)
scaffold0154 (15-52)||(4315-4352)
[»] scaffold0662 (1 HSPs)
scaffold0662 (15-52)||(1078-1115)
[»] scaffold0024 (1 HSPs)
scaffold0024 (15-52)||(60469-60506)
[»] scaffold0020 (1 HSPs)
scaffold0020 (15-52)||(155906-155943)
[»] scaffold0003 (1 HSPs)
scaffold0003 (15-52)||(337118-337155)
[»] scaffold0002 (2 HSPs)
scaffold0002 (15-52)||(6427-6464)
scaffold0002 (15-52)||(440718-440755)
[»] scaffold0046 (1 HSPs)
scaffold0046 (25-65)||(88378-88417)


Alignment Details
Target: chr4 (Bit Score: 281; Significance: 1e-157; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 54 - 411
Target Start/End: Original strand, 7009704 - 7010064
Alignment:
Q  54 tttaaaatttgtgacatatg-ttatatagactcaaaatggatttatagtttaaactaaacggttcttctcaatcattctctgtactttttatattttata 152  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  7009704 tttaaaatttgtgacatatggttatatagactcaaaatggatttatagtttaaactaaacggttcttctcaatcattatatgtactttttatattttata 7009803  T
Q  153 gaacgcacgttcttctcaacaactcatcatcaacaaaaacatt-aaagtgtcagagaaactagttgaagct-tgcaaagatgaacatgatggttcctcct 250  Q
    |||| |||||||||||||||||||||| |||||||| |||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  7009804 gaacacacgttcttctcaacaactcatgatcaacaagaacatttaaagtgtcagagaaattagttgaagctctgcaaagatgaacatgatggttcctcct 7009903  T
Q  251 tctcataattcacttcactattgttgtcagattctactagctcttggactttttagtttgaatatgttaactcatattgaagcttatggctcaaaggttg 350  Q
    |||||||||||||||||||||| |||||||||||||||  |||||| |||| |||||||| |||||||||||| | ||||||||||||||||||||||||    
T  7009904 tctcataattcacttcactatttttgtcagattctactttctcttgtacttcttagtttgcatatgttaactcctcttgaagcttatggctcaaaggttg 7010003  T
Q  351 aacatcttcctggttttcaagggccacttccttttgaacttgaaactgggtcagtaatctt 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7010004 aacatcttcctggttttcaagggccacttccttttgaacttgaaactgggtcagtaatctt 7010064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 172 - 401
Target Start/End: Original strand, 6992036 - 6992267
Alignment:
Q  172 caactcatcatcaacaaaaacatt-aaagtgtcagagaaactagttgaagctt-gcaaagatgaacatgatggttcctccttctcataattcacttcact 269  Q
    ||||| ||||||||||| |||||| |||| ||||| |||  || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6992036 caactaatcatcaacaagaacatttaaagagtcagggaagttaattgaagctttgcaaagatgaacatgatggttcctccttctcataattcacttcact 6992135  T
Q  270 attgttgtcagattctactagctcttggactttttagtttgaatatgttaactcatattgaagcttatggctcaaaggttgaacatcttcctggttttca 369  Q
    ||| ||||||||||||||| ||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6992136 attcttgtcagattctacttgcatttggactttttactttgaatatgttaactcatattgaagcttatggctcaaaggttgaacatcttcctggttttca 6992235  T
Q  370 agggccacttccttttgaacttgaaactgggt 401  Q
    ||| || |||||||||||||||||||||||||    
T  6992236 aggacctcttccttttgaacttgaaactgggt 6992267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 208 - 401
Target Start/End: Original strand, 7036485 - 7036678
Alignment:
Q  208 aaactagttgaagcttgcaaagatgaacatgatggttcctccttctcataattcacttcactattgttgtcagattctactagctcttggactttttagt 307  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||| |||| |||||    
T  7036485 aaactaattgaagcttgcaaagatgaacatgatggttcctccttctcataattcacttcactatttttgtcagattctactttctcttgtacttcttagt 7036584  T
Q  308 ttgaatatgttaactcatattgaagcttatggctcaaaggttgaacatcttcctggttttcaagggccacttccttttgaacttgaaactgggt 401  Q
    ||| |||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||| |||||||||| ||||    
T  7036585 ttgcatatgttaactcctcttgaagcttatggctcaaaggttgaacaccttcctggttttcaaggacctcttccttttcaacttgaaacagggt 7036678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 161 - 404
Target Start/End: Original strand, 7044103 - 7044347
Alignment:
Q  161 gttcttctcaacaactcatcatcaacaaaaacatta-aagtgtcagagaaactagttgaagcttgcaaagatgaacatgatggttcctccttctcataat 259  Q
    ||||||||||||||||  |||||||||| ||||||  ||| |||||| ||  ||  ||||||||||||||||||||||||||| |||||| |||| ||||    
T  7044103 gttcttctcaacaactactcatcaacaagaacattttaagagtcagaaaagttaagtgaagcttgcaaagatgaacatgatggctcctccatctcgtaat 7044202  T
Q  260 tcacttcactattgttgtcagattctactagctcttggactttttagtttgaatatgttaactcatattgaagcttatggctcaaaggttgaacatcttc 359  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| | |||||||||| | ||||||||| | |||||||||||||||||||||    
T  7044203 tcacttcactattcttgtcagattctacttgctcttggactttttagtttgcagatgttaactcctcttgaagcttctcgctcaaaggttgaacatcttc 7044302  T
Q  360 ctggttttcaagggccacttccttttgaacttgaaactgggtcag 404  Q
    ||||||||||||| || ||||| |||||||||||||| |||||||    
T  7044303 ctggttttcaaggacctcttccatttgaacttgaaacagggtcag 7044347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 139 - 401
Target Start/End: Original strand, 7017829 - 7018092
Alignment:
Q  139 ttttatattttatagaacgcacgttcttctcaacaactcatcatcaacaaaaacatta-aagtgtcagagaaactagttgaagcttgcaaagatgaacat 237  Q
    |||||||||||||||||| || |||||| ||||||||| ||||||||||| | ||||  ||| |||||| ||| || |||||||||||||||||| ||||    
T  7017829 ttttatattttatagaac-catgttcttttcaacaactaatcatcaacaagagcattttaagagtcagaaaaattaattgaagcttgcaaagatgtacat 7017927  T
Q  238 gatggttcctccttctcataattcacttcactattgttgtcagattctactagctcttggactttttagtttgaatatgttaactcatattgaagcttat 337  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||| |||| ||| ||| ||||||||  ||| | || ||| |||| ||||||||||||    
T  7017928 gatggctcctccttctcataatttacttcactattgttgtcaaattgtacttgcttttgcactttttatcttgcagatattatctcacattgaagcttat 7018027  T
Q  338 ggctcaaaggttgaacatcttcctgg-ttttcaagggccacttccttttgaacttgaaactgggt 401  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| ||||    
T  7018028 ggctcaaaggttgaacagcttcctggtttttcaaggaccacttccttttgaacttgaaacggggt 7018092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 174 - 401
Target Start/End: Original strand, 7000841 - 7001067
Alignment:
Q  174 actcatcatcaacaaaaacatt-aaagtgtcagagaaactagttgaagcttgcaaagatgaacatgatggttcctccttctcataattcacttcactatt 272  Q
    |||||| |||||||| |||||| ||||||| |||  || |||||||| |||||||||||||||| | || |||||||||||||||||||||  |||||||    
T  7000841 actcatgatcaacaataacatttaaagtgttaga--aagtagttgaatcttgcaaagatgaacaagttgattcctccttctcataattcaccacactatt 7000938  T
Q  273 gttgtcagattctactagctcttggactttttagtttgaatatgttaactcatattgaagcttatggctcaaaggttgaacatcttcctggttttcaagg 372  Q
     |||||||||||||||  |||||| |||| |||||||| |||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||    
T  7000939 cttgtcagattctactttctcttgtacttcttagtttgcatatgttaactcctcttgaagcttatggctcaaaggttgaacagcttcctggttttcaagg 7001038  T
Q  373 gccacttccttttgaacttgaaactgggt 401  Q
     ||||||||||||||||||||||| ||||    
T  7001039 tccacttccttttgaacttgaaacagggt 7001067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 243 - 401
Target Start/End: Original strand, 7025194 - 7025352
Alignment:
Q  243 ttcctccttctcataattcacttcactattgttgtcagattctactagctcttggactttttagtttgaatatgttaactcatattgaagcttatggctc 342  Q
    ||||||||||||||| ||||||  |||||||||||||| || |||| ||| ||| ||||||||||||| |||||||||||| | ||||||||||||||||    
T  7025194 ttcctccttctcatagttcactatactattgttgtcagtttgtacttgcttttgcactttttagtttgcatatgttaactcctcttgaagcttatggctc 7025293  T
Q  343 aaaggttgaacatcttcctggttttcaagggccacttccttttgaacttgaaactgggt 401  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  7025294 aaaggttgaacaccttcctggttttcaagggccactcccttttgaacttgaaacggggt 7025352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 247 - 401
Target Start/End: Original strand, 7051182 - 7051336
Alignment:
Q  247 tccttctcataattcacttcactattgttgtcagattctactagctcttggactttttagtttgaatatgttaactcatattgaagcttatggctcaaag 346  Q
    |||| |||||| ||||||  |||||||||||||| || ||||  || ||| ||||||||||||| |||||||||||| | ||||||||| ||||||||      
T  7051182 tcctcctcatagttcactatactattgttgtcagtttgtacttacttttgcactttttagtttgcatatgttaactcctcttgaagcttctggctcaaga 7051281  T
Q  347 gttgaacatcttcctggttttcaagggccacttccttttgaacttgaaactgggt 401  Q
    |||||||| |||||||||||||||||||| || ||||||||||||||||| ||||    
T  7051282 gttgaacaccttcctggttttcaagggccgctcccttttgaacttgaaacggggt 7051336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 27384236 - 27384187
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  27384236 aatatgagagagaaagttgtaataaaatggttgtacaaatatcatttctc 27384187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 32365678 - 32365727
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  32365678 aatatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 32365727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 4511872 - 4511825
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||||    
T  4511872 tatgagagagaaagttgtcataaaatggttatacaaatatcatttctc 4511825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 15515842 - 15515795
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||||||||| ||||||| |||||||||||||    
T  15515842 tatgagagagaaagttgtcataaaatagttgtaccaatatcatttctc 15515795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 3475906 - 3475869
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| |||||||||||||||||||||    
T  3475906 aaagttgtcataaaatggttgtacaaatatcatttctc 3475869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 11012178 - 11012141
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| |||||||||||||||||||||    
T  11012178 aaagttgtcataaaatggttgtacaaatatcatttctc 11012141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 24088598 - 24088635
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| |||||||||||||||||||||    
T  24088598 aaagttgtcataaaatggttgtacaaatatcatttctc 24088635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 56557770 - 56557733
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||||||||| |||||||||||||||    
T  56557770 aaagttgtcataaaattgttgttcaaatatcatttctc 56557733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 52430914 - 52430874
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctcctt 55  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  52430914 aaagttgtcataaaatagttgtacaaatatcatttttcctt 52430874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 1868906 - 1868953
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||||||||||||   ||||| |||||||||||||||||||||    
T  1868906 tatgagatagaaagttgtacaaaaatggttgtacaaatatcatttctc 1868953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 4974158 - 4974111
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||| | ||||| |||||||||||||||||||||    
T  4974158 tatgagagagaaagttgttaaaaaatagttgtacaaatatcatttctc 4974111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 33093136 - 33093175
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  33093136 agaaagttgtcacaaaatagttgtacaaatatcatttctc 33093175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 39241314 - 39241361
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||||    
T  39241314 tatgagagagaaagttgtcacaaattggttgtacaaatatcatttctc 39241361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 42490967 - 42490920
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||||    
T  42490967 tatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctc 42490920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 45764420 - 45764459
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  45764420 agaaagttgtcataaaatagttgtataaatatcatttctc 45764459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 54036542 - 54036589
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| | |||||||||| ||||| |||||||||||||||||||||    
T  54036542 tatgagagataaagttgtcacaaaatggttgtacaaatatcatttctc 54036589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 2313359 - 2313393
Alignment:
Q  18 gttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||||||||||||||||||    
T  2313359 gttgtcacaaaattgttgtacaaatatcatttctc 2313393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 5386431 - 5386385
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    ||||||| |||||||||||| ||||| ||||| ||||||||||||||    
T  5386431 tatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 5386385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 28676173 - 28676211
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  28676173 agaaagttgtcacaaaatggttgtacaaatatcatttct 28676211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 29973071 - 29973105
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcattt 49  Q
    |||||||||| ||||||||||||||||||||||||    
T  29973071 aaagttgtcacaaaattgttgtacaaatatcattt 29973105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 169536 - 169573
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  169536 aaagttgtcacaaaatggttgtacaaatatcatttctc 169573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 1796016 - 1796053
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||| | |||||||||||||||||||||||||||    
T  1796016 aaagttgttaaaaaattgttgtacaaatatcatttctc 1796053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 9827998 - 9828043
Alignment:
Q  7 tgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||| ||||||||||  |||||| |||||||||||||||||||||    
T  9827998 tgagagagaaagttgtactaaaatggttgtacaaatatcatttctc 9828043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 12074189 - 12074222
Alignment:
Q  19 ttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||| |||||||||||||||||||||    
T  12074189 ttgtcataaaatggttgtacaaatatcatttctc 12074222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 18880822 - 18880785
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  18880822 aaagttatcataaaattgttgtacatatatcatttctc 18880785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 21152688 - 21152655
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatt 48  Q
    |||||| |||||||||||||||||||||||||||    
T  21152688 aaagttatcataaaattgttgtacaaatatcatt 21152655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 23220372 - 23220335
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  23220372 aaagttgtcaaaaaatggttgtacaaatatcatttctc 23220335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 24772708 - 24772671
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| | |||||||||||||||||||    
T  24772708 aaagttgtcataaaatggatgtacaaatatcatttctc 24772671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 30973634 - 30973597
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||| | |||||||||||||||||||||    
T  30973634 aaagttgtcataaagtggttgtacaaatatcatttctc 30973597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 35017190 - 35017153
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  35017190 aaagttgtcacaaaatagttgtacaaatatcatttctc 35017153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 35661635 - 35661668
Alignment:
Q  19 ttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||| |||||||||||||||||||||    
T  35661635 ttgtcataaaatggttgtacaaatatcatttctc 35661668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 36444429 - 36444466
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  36444429 aaagttatcataaaatggttgtacaaatatcatttctc 36444466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 36871179 - 36871236
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctcctttaaaa 60  Q
    ||||| ||| ||||||||||   ||||| ||||||||||||||||||||| |||||||    
T  36871179 aatataagagagaaagttgtacaaaaatagttgtacaaatatcatttctcatttaaaa 36871236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 39010171 - 39010208
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  39010171 aaagttgtcacaaaatggttgtacaaatatcatttctc 39010208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 41609713 - 41609750
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| | |||||||||||||||||||    
T  41609713 aaagttgtcataaaatggatgtacaaatatcatttctc 41609750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 42853976 - 42853939
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  42853976 aaagttgtcaaaaaatagttgtacaaatatcatttctc 42853939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 44272844 - 44272881
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  44272844 aaagttgtcaaaaaatagttgtacaaatatcatttctc 44272881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 45521613 - 45521650
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| | |||||||||||||||||||    
T  45521613 aaagttgtcataaaatggatgtacaaatatcatttctc 45521650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 46686291 - 46686235
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctcctttaaaatt 62  Q
    ||||||| |||||||||| | ||||| ||||||||||||||||||||| ||| |||||    
T  46686291 tatgagagagaaagttgt-acaaaatggttgtacaaatatcatttctctttttaaatt 46686235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 47014976 - 47014939
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  47014976 aaagttgtcacaaaatagttgtacaaatatcatttctc 47014939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 51160671 - 51160708
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  51160671 aaagttgtcataaaatgtttgtacaaatatcatttctc 51160708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 51359824 - 51359861
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  51359824 aaagttgtcacaaaatggttgtacaaatatcatttctc 51359861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 30042170 - 30042134
Alignment:
Q  16 aagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  30042170 aagttgtcacaaaatggttgtacaaatatcatttctc 30042134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 41119497 - 41119541
Alignment:
Q  8 gagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||| |||||||||||| ||| | |||||||||||||||||||||    
T  41119497 gagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 41119541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 46173594 - 46173550
Alignment:
Q  8 gagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||| |||||||||||| ||| | |||||||||||||||||||||    
T  46173594 gagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 46173550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 7e-16; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 2323351 - 2323304
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2323351 tatgagagagaaagttgtcataaaattgttgtacaaatatcatttctc 2323304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 43444682 - 43444634
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctcc 53  Q
    ||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  43444682 tatgagagagaaagttgtcataaagtggttgtacaaatatcatttctcc 43444634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 33050220 - 33050174
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctcctttaaaat 61  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  33050220 aaagttgtcacaaaatggttgtacaaatatcatttctcatttaaaat 33050174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 38547303 - 38547349
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  38547303 tatgagaaagaaagttgtcaaaaaatagttgtacaaatatcatttct 38547349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 22692121 - 22692084
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| |||||||||||||||||||||    
T  22692121 aaagttgtcataaaatggttgtacaaatatcatttctc 22692084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 26153683 - 26153646
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| |||||||||||||||||||||    
T  26153683 aaagttgtcataaaatagttgtacaaatatcatttctc 26153646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 28862092 - 28862141
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| | |||||||||||||||||| | |||||||||||||||||||    
T  28862092 aatatgaaagagaaagttgtcataaaatggatgtacaaatatcatttctc 28862141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 45420071 - 45420120
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| |||||||||||| ||||| ||||| |||||||||||||||    
T  45420071 aatatgagagagaaagttgtcaaaaaatagttgttcaaatatcatttctc 45420120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 30818031 - 30818067
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    |||||||||||||||| ||||||||||||||||||||    
T  30818031 aaagttgtcataaaatggttgtacaaatatcatttct 30818067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 43171207 - 43171243
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    |||||||||||||||| ||||||||||||||||||||    
T  43171207 aaagttgtcataaaatggttgtacaaatatcatttct 43171243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 2469750 - 2469703
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||||    
T  2469750 tatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 2469703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 11352986 - 11353033
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||||||| ||| |||||||||||||||    
T  11352986 tatgagagagaaagttgtcacaaaattgatgttcaaatatcatttctc 11353033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 22330644 - 22330691
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||||    
T  22330644 tatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 22330691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 26041360 - 26041321
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  26041360 agaaagttgtcataaaatggttgtacgaatatcatttctc 26041321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 26749063 - 26749017
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  26749063 tatgagagagaaagttgtca-aaaattgttgttcaaatatcatttctc 26749017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 31785484 - 31785531
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||| ||||||| | |||||||||||||||||||||    
T  31785484 tatgagagagaaagttttcataaagtggttgtacaaatatcatttctc 31785531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 34992360 - 34992395
Alignment:
Q  17 agttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||| |||||||||||||||||||||    
T  34992360 agttgtcataaaatggttgtacaaatatcatttctc 34992395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 37352003 - 37352050
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||||    
T  37352003 tatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 37352050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 47078263 - 47078310
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||||||||| | ||| |||||||||||||||    
T  47078263 tatgagagagaaagttgtcataaaatagatgttcaaatatcatttctc 47078310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 49025335 - 49025373
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  49025335 agaaagttgtcataaaataattgtacaaatatcatttct 49025373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 2347093 - 2347130
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  2347093 aaagttgtcacaaaatggttgtacaaatatcatttctc 2347130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 4971327 - 4971290
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  4971327 aaagttgtcacaaaatggttgtacaaatatcatttctc 4971290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 5068657 - 5068694
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  5068657 aaagttatcataaaatggttgtacaaatatcatttctc 5068694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 19426617 - 19426580
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  19426617 aaagttgtcacaaaatggttgtacaaatatcatttctc 19426580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 36990099 - 36990058
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatca 46  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||    
T  36990099 tatgagagagaaagttgtcataaaattattgtataaatatca 36990058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 37392080 - 37392043
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  37392080 aaagttgtcaaaaaatggttgtacaaatatcatttctc 37392043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 37856188 - 37856225
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  37856188 aaagttgtcacaaaatggttgtacaaatatcatttctc 37856225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 40693562 - 40693599
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  40693562 aaagttgtcaaaaaatagttgtacaaatatcatttctc 40693599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 47530325 - 47530362
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  47530325 aaagttgtcataaaatggttgtataaatatcatttctc 47530362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 3937134 - 3937186
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctccttta 57  Q
    ||||||| |||||||||||| ||||| | ||| ||||||||||||||| ||||    
T  3937134 tatgagagagaaagttgtcacaaaatagatgttcaaatatcatttctctttta 3937186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 20406578 - 20406538
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctcctt 55  Q
    |||||||||| || || ||||||||||||||||||||||||    
T  20406578 aaagttgtcacaagatggttgtacaaatatcatttctcctt 20406538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 23680059 - 23680095
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcattt 49  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  23680059 agaaagttgtcacaaaatagttgtacaaatatcattt 23680095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 23910285 - 23910321
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  23910285 aaagttgtcaaaaaatggttgtacaaatatcatttct 23910321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 37832485 - 37832449
Alignment:
Q  17 agttgtcataaaattgttgtacaaatatcatttctcc 53  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  37832485 agttgtcacaaaatagttgtacaaatatcatttctcc 37832449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 8482243 - 8482298
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctcctttaa 58  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||||| |||||    
T  8482243 aatatgagagagaaagttgtcataaagtggttgtacaaatatcatttctcttttaa 8482298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 25086374 - 25086335
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25086374 agaaagttgtcataaaattgttgtacaaatatcatttctc 25086335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 15141520 - 15141473
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||    
T  15141520 tatgagagagaaagttgtcataaaatagatgtacaaatatcatttctc 15141473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 1095847 - 1095896
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| ||||| |||||||||||| | |||||||||||||||||||    
T  1095847 aatatgagagagaaaattgtcataaaatggatgtacaaatatcatttctc 1095896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 3299139 - 3299176
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| |||||||||||||||||||||    
T  3299139 aaagttgtcataaaatggttgtacaaatatcatttctc 3299176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 14714023 - 14713986
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||||| |||||||||||||||||||    
T  14714023 aaagttgtcataaaattgatgtacaaatatcatttctc 14713986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 14891100 - 14891149
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| |||||||| ||| ||||| |||||||||||||||||||||    
T  14891100 aatatgagaaagaaagttatcacaaaatagttgtacaaatatcatttctc 14891149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 36175787 - 36175746
Alignment:
Q  8 gagatagaaagttgtcataaaattgttgtacaaatatcattt 49  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  36175787 gagatagatagttgtcataaaatagttgtacaaatatcattt 36175746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 45202143 - 45202192
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| |||||||||| | ||||| |||||||||||||||||||||    
T  45202143 aatatgagagagaaagttgtaaaaaaatggttgtacaaatatcatttctc 45202192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 22353188 - 22353235
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| |||||  ||||||||||||||||||||    
T  22353188 tatgagaaagaaagttgtcacaaaatgattgtacaaatatcatttctc 22353235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 29795486 - 29795447
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  29795486 agaaagttgtcacaaaatggttgtacaaatatcatttctc 29795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 40700254 - 40700207
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||| ||||||| |||||||||||| ||||||||    
T  40700254 tatgagagagaaagttgttataaaatagttgtacaaataccatttctc 40700207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 43725263 - 43725216
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||||||| | | |||||||||||||||||||    
T  43725263 tatgagagagaaagttgtcataaagtagatgtacaaatatcatttctc 43725216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 694330 - 694280
Alignment:
Q  2 aaatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||| ||||| ||||| |||||| ||||| |||||||||||||||||||||    
T  694330 aaatgtgagagagaaaattgtcaaaaaatggttgtacaaatatcatttctc 694280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 10749717 - 10749755
Alignment:
Q  19 ttgtcataaaattgttgtacaaatatcatttctccttta 57  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  10749717 ttgtcataaaatggttgtacaaatatcatttctctttta 10749755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 6666057 - 6666020
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  6666057 aaagttgtaataaaatggttgtacaaatatcatttctc 6666020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 7498025 - 7498062
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  7498025 aaagttgtaataaaatggttgtacaaatatcatttctc 7498062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 12192007 - 12191958
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| |||||||| ||||| ||| ||| |||||||||||||||||    
T  12192007 aatatgagagagaaagttatcatataatggttatacaaatatcatttctc 12191958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 14255339 - 14255302
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  14255339 aaagttgtcataaaatagttgtacaaatattatttctc 14255302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 15123970 - 15124007
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  15123970 aaagttgtcaaaaaatggttgtacaaatatcatttctc 15124007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 17264088 - 17264133
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttc 50  Q
    ||||||| |||||||||||||||||| ||| || ||||||||||||    
T  17264088 tatgagaaagaaagttgtcataaaatggttatataaatatcatttc 17264133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 22303240 - 22303203
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  22303240 aaagttgtcaaaaaatagttgtacaaatatcatttctc 22303203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 24361549 - 24361505
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||||||| |||   |||||||||||||||||||||    
T  24361549 tatgagatagaaagttgtcaaaaa---gttgtacaaatatcatttctc 24361505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 29168762 - 29168725
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  29168762 aaagttgtcaaaaaatggttgtacaaatatcatttctc 29168725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 36909877 - 36909914
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  36909877 aaagttgtcacaaaatggttgtacaaatatcatttctc 36909914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 38821403 - 38821366
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  38821403 aaagttgtcataaaatggttgttcaaatatcatttctc 38821366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 42075394 - 42075431
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  42075394 aaagttgttatagaattgttgtacaaatatcatttctc 42075431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 43621982 - 43622015
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatt 48  Q
    |||||||||||||||| |||||||||||||||||    
T  43621982 aaagttgtcataaaatagttgtacaaatatcatt 43622015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 44050052 - 44050015
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  44050052 aaagttgtcataaaatggttgtacaagtatcatttctc 44050015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 44189864 - 44189827
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||| | |||||||||||||||||||||    
T  44189864 aaagttgtcataaagtggttgtacaaatatcatttctc 44189827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 44484581 - 44484548
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatt 48  Q
    |||||||||||||||||| |||||||||||||||    
T  44484581 aaagttgtcataaaattgatgtacaaatatcatt 44484548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 8087408 - 8087372
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    ||||||||||||||||  |||||||||||||||||||    
T  8087408 aaagttgtcataaaataattgtacaaatatcatttct 8087372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 42340748 - 42340780
Alignment:
Q  26 aaaattgttgtacaaatatcatttctcctttaa 58  Q
    ||||||||||| |||||||||||||||||||||    
T  42340748 aaaattgttgttcaaatatcatttctcctttaa 42340780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 40139173 - 40139126
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  40139173 tatgagagagaaagttgtcataaaatggttgtacaaatatcatttctc 40139126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 43612093 - 43612140
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  43612093 tatgagagagaaagttgtcataaaatggttgtacaaatatcatttctc 43612140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 48325791 - 48325846
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctcctttaaaa 60  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||||| |||||||    
T  48325791 tatgagatagaaaattgtcacaaaatggttgtacaaatatcatttctcttttaaaa 48325846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 29264062 - 29264012
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctcctt 55  Q
    ||||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  29264062 tatgagaaagaaagttgtcataaagtggttgtacaaatatcatttctcctt 29264012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 29294006 - 29293956
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctcctt 55  Q
    ||||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  29294006 tatgagagagaaagttgtcataaagtagttgtacaaatatcatttctcctt 29293956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 40596067 - 40596114
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  40596067 tatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 40596114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 41507207 - 41507254
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  41507207 tatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 41507254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 11947832 - 11947795
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| |||||||||||||||||||||    
T  11947832 aaagttgtcataaaatggttgtacaaatatcatttctc 11947795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 31184318 - 31184281
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| |||||||||||||||||||||    
T  31184318 aaagttgtcataaaatggttgtacaaatatcatttctc 31184281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 48872043 - 48872088
Alignment:
Q  7 tgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||| |||||||||||| ||||| |||||||||||||||||||||    
T  48872043 tgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctc 48872088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 50017457 - 50017494
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||| |||||||||||||||||||||||||||||    
T  50017457 aaagttgtaataaaattgttgtacaaatatcatttctc 50017494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 39780175 - 39780219
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcattt 49  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||    
T  39780175 tatgagatagaaagatgtcataaaatggttgtacaaatattattt 39780219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 51571464 - 51571416
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    ||||||||| |||||||||||| ||| | ||||||||||||||||||||    
T  51571464 aatatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttct 51571416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 27687532 - 27687579
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| | |||||||||| ||||| |||||||||||||||||||||    
T  27687532 tatgagagataaagttgtcacaaaatggttgtacaaatatcatttctc 27687579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 45272173 - 45272220
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||||    
T  45272173 tatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctc 45272220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 49453538 - 49453491
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||||    
T  49453538 tatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 49453491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 49589987 - 49590034
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| |||||||| ||||| | |||||||||||||||||||||    
T  49589987 tatgagataaaaagttgtaataaagtggttgtacaaatatcatttctc 49590034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 50781582 - 50781629
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||||||||| | ||| |||||||||||||||    
T  50781582 tatgagagagaaagttgtcataaaatggatgttcaaatatcatttctc 50781629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 50797838 - 50797791
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| |||||  ||||||||||||||||||||    
T  50797838 tatgagagagaaagttgtcacaaaatgattgtacaaatatcatttctc 50797791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 1690493 - 1690436
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctcctttaaaattt 63  Q
    ||||||| | |||||||||| ||||| ||||||||||||| |||||| |||||||||||    
T  1690493 tatgagagaaaaagttgtcacaaaatggttgtacaaatattatttct-ctttaaaattt 1690436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 19969574 - 19969620
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    ||||||| |||||||||||||||||| | ||| ||||||||||||||    
T  19969574 tatgagagagaaagttgtcataaaatggatgttcaaatatcatttct 19969620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 32811912 - 32811946
Alignment:
Q  26 aaaattgttgtacaaatatcatttctcctttaaaa 60  Q
    ||||||||||||||||||||||||||| |||||||    
T  32811912 aaaattgttgtacaaatatcatttctcttttaaaa 32811946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 34395953 - 34395995
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctccttta 57  Q
    |||||||||||||||| | |||||||||||||||| |||||||    
T  34395953 aaagttgtcataaaatagatgtacaaatatcatttatccttta 34395995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 42256497 - 42256455
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctccttta 57  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||    
T  42256497 aaagttgtcacaaaatggttgtacaaatatcatttctctttta 42256455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 9011682 - 9011645
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  9011682 aaagttgtcacaaaatggttgtacaaatatcatttctc 9011645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 14983833 - 14983784
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| |||||||||| | ||| | |||||||||||||||||||||    
T  14983833 aatatgagagagaaagttgttaaaaagtggttgtacaaatatcatttctc 14983784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 17167886 - 17167849
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| | |||||||||||||||||||    
T  17167886 aaagttgtcataaaatggatgtacaaatatcatttctc 17167849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 18610810 - 18610773
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  18610810 aaagttgtcacaaaatagttgtacaaatatcatttctc 18610773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 29706737 - 29706774
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  29706737 aaagttatcataaaatggttgtacaaatatcatttctc 29706774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 40238475 - 40238434
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctccttt 56  Q
    |||||||||| |||||  ||||||||||||||||||||||||    
T  40238475 aaagttgtcaaaaaatgattgtacaaatatcatttctccttt 40238434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 42539463 - 42539418
Alignment:
Q  7 tgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||| |||||||||||| | ||| |||||||||||||||||||||    
T  42539463 tgagagagaaagttgtcacataatggttgtacaaatatcatttctc 42539418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 42843378 - 42843415
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  42843378 aaagttatcaaaaaattgttgtacaaatatcatttctc 42843415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 46948018 - 46947981
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| | |||||||||||||||||||    
T  46948018 aaagttgtcataaaatggatgtacaaatatcatttctc 46947981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 47386828 - 47386865
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  47386828 aaagttgttataaaatggttgtacaaatatcatttctc 47386865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 48872416 - 48872379
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||| | |||||||||||||||||||||    
T  48872416 aaagttgtcataaagtggttgtacaaatatcatttctc 48872379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 5477176 - 5477220
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcattt 49  Q
    ||||||| |||||||||||| ||| | ||||||||||||||||||    
T  5477176 tatgagagagaaagttgtcacaaagtggttgtacaaatatcattt 5477220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 13489699 - 13489659
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctcctt 55  Q
    |||||||||||||||| | ||| ||||||||||||||||||    
T  13489699 aaagttgtcataaaatggatgttcaaatatcatttctcctt 13489659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 20016521 - 20016560
Alignment:
Q  25 taaaattgttgtacaaatatcatttctcctttaaaatttgt 65  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  20016521 taaaattgttatacaaatatcatttct-ctttaaaatttgt 20016560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 30196772 - 30196724
Alignment:
Q  5 tatgagatagaaagttgtcataaaattg-ttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||||||| ||||| ||||||||||||||    
T  30196772 tatgagagagaaagttgtcaaaaaattgattgtagaaatatcatttctc 30196724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 33076156 - 33076116
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctcctt 55  Q
    |||||||| | ||||| ||||||||||||||||||||||||    
T  33076156 aaagttgttagaaaatggttgtacaaatatcatttctcctt 33076116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 36954716 - 36954671
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| |||  ||||||||||||||||||||||    
T  36954716 tatgagaaagaaagttgtcaaaaa--tgttgtacaaatatcatttctc 36954671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 40612150 - 40612114
Alignment:
Q  16 aagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  40612150 aagttgtcacaaaatggttgtacaaatatcatttctc 40612114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 11056933 - 11056982
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| | |||||||||||| |||||||||||||||||||||||||||    
T  11056933 aatatgaaagagaaagttgtcaaaaaattgttgtacaaatatcatttctc 11056982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 44937258 - 44937219
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  44937258 agaaagttgtcaaaaaattgttgtacaaatatcatttctc 44937219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 47683848 - 47683801
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  47683848 tatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 47683801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 50876383 - 50876422
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  50876383 agaaagttgtcaaaaaattgttgtacaaatatcatttctc 50876422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 19418191 - 19418228
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| |||||||||||||||||||||    
T  19418191 aaagttgtcataaaatggttgtacaaatatcatttctc 19418228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 50652425 - 50652388
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| |||||||||||||||||||||    
T  50652425 aaagttgtcataaaatggttgtacaaatatcatttctc 50652388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 3484817 - 3484769
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctcc 53  Q
    ||||||| |||||||||| ||||||| |||| |||||||||||||||||    
T  3484817 tatgagagagaaagttgtaataaaatggttggacaaatatcatttctcc 3484769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 53871043 - 53871091
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    ||||||||| ||||| |||||||||||| ||||| ||||||||||||||    
T  53871043 aatatgagagagaaaattgtcataaaatggttgttcaaatatcatttct 53871091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 1337851 - 1337898
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||||||| |||||||||||| | ||| |||||||||||||||    
T  1337851 tatgagatagaaaattgtcataaaatggatgttcaaatatcatttctc 1337898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 43169766 - 43169813
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| | |||||||||| ||||| |||||||||||||||||||||    
T  43169766 tatgagagaaaaagttgtcacaaaatggttgtacaaatatcatttctc 43169813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 46952996 - 46952949
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||| ||| ||||| |||||||||||||||||||||    
T  46952996 tatgagagagaaagttatcaaaaaatggttgtacaaatatcatttctc 46952949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 462435 - 462472
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  462435 aaagttgtcacaaaatggttgtacaaatatcatttctc 462472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 1402687 - 1402650
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| | |||||||||||||||||||    
T  1402687 aaagttgtcataaaatggatgtacaaatatcatttctc 1402650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 7867745 - 7867782
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  7867745 aaagttgtcacaaaatagttgtacaaatatcatttctc 7867782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 8254064 - 8254027
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  8254064 aaagttgtcacaaaatggttgtacaaatatcatttctc 8254027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 10811172 - 10811135
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  10811172 aaagttgtcataaaatggttgttcaaatatcatttctc 10811135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 11327145 - 11327108
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  11327145 aaagttgtcacaaaatggttgtacaaatatcatttctc 11327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 28300682 - 28300719
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||| | |||||||||||||||||||||    
T  28300682 aaagttgtcataaagtggttgtacaaatatcatttctc 28300719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 30400190 - 30400227
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  30400190 aaagttgtcacaaatttgttgtacaaatatcatttctc 30400227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 30580170 - 30580133
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  30580170 aaagttgtcataaaatggttgtataaatatcatttctc 30580133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 36869871 - 36869908
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  36869871 aaagttgtcaaaaaatggttgtacaaatatcatttctc 36869908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 37134644 - 37134677
Alignment:
Q  19 ttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||| |||||||||||||||||||||    
T  37134644 ttgtcataaaatagttgtacaaatatcatttctc 37134677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 42718181 - 42718132
Alignment:
Q  3 aatatgagatagaaagttgtca-taaaattgttgtacaaatatcatttct 51  Q
    ||||||||| |||||||||| | |||||| ||||||||||||||||||||    
T  42718181 aatatgagagagaaagttgttaataaaatggttgtacaaatatcatttct 42718132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 43460430 - 43460373
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctcctttaaaa 60  Q
    ||||||||| |||  ||||||| ||||| ||||||| ||||||||||||| |||||||    
T  43460430 aatatgagagagagggttgtcacaaaatggttgtacgaatatcatttctcatttaaaa 43460373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 45528976 - 45529013
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  45528976 aaagttgtcaaaaaatagttgtacaaatatcatttctc 45529013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 46315989 - 46316026
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||| | |||||||||||||||||||||    
T  46315989 aaagttgtcataaagtggttgtacaaatatcatttctc 46316026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 48287708 - 48287671
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  48287708 aaagttgttataaaatggttgtacaaatatcatttctc 48287671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 48405447 - 48405410
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  48405447 aaagttgtcacaaaatggttgtacaaatatcatttctc 48405410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 49196733 - 49196696
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  49196733 aaagttgtcacaaaatggttgtacaaatatcatttctc 49196696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 50280121 - 50280158
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  50280121 aaagttgtcatagaatggttgtacaaatatcatttctc 50280158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 50559246 - 50559283
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  50559246 aaagttgtcaaaaaatagttgtacaaatatcatttctc 50559283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 53392098 - 53392135
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  53392098 aaagttgtcaaaaaattgttgtacaaatattatttctc 53392135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 30633855 - 30633887
Alignment:
Q  20 tgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||| |||||||||||||||||||||||||||    
T  30633855 tgtcacaaaattgttgtacaaatatcatttctc 30633887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 47101559 - 47101523
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  47101559 aaagttgtcacaaaatggttgtacaaatatcatttct 47101523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 32644670 - 32644614
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctcctttaaaat 61  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||||||| ||| ||||    
T  32644670 tatgagagagaaagttgtcaaaaaatagttgtacaaatatcatttctcattttaaat 32644614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 11635647 - 11635609
Alignment:
Q  22 tcataaaattgttgtacaaatatcatttctcctttaaaa 60  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  11635647 tcataaaattgttgtacaaatatcatttctcttttaaaa 11635609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 16328713 - 16328761
Alignment:
Q  4 atatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||| | |||||||| ||||||| |||||||||||||||||||||    
T  16328713 atatgagagataaagttgttataaaatggttgtacaaatatcatttctc 16328761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 29467412 - 29467368
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcattt 49  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||||    
T  29467412 tatgagagagaaagttgtcataaaatagttgtacaaatattattt 29467368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 1897736 - 1897697
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  1897736 agaaagttgtcataaagtggttgtacaaatatcatttctc 1897697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 12441585 - 12441538
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||||    
T  12441585 tatgagagagaaagttgtcacaaagtagttgtacaaatatcatttctc 12441538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 27334895 - 27334848
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctcctttaaaatt 62  Q
    |||||||||| ||||| ||||||||||||||||||||| ||| |||||    
T  27334895 aaagttgtcacaaaatagttgtacaaatatcatttctctttttaaatt 27334848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 27395635 - 27395588
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctcctttaaaatt 62  Q
    |||||||||| ||||| ||||||||||||||||||||| ||| |||||    
T  27395635 aaagttgtcacaaaatagttgtacaaatatcatttctctttttaaatt 27395588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 2822271 - 2822222
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| ||||||| || | ||||||| |||||||||||||||||||||    
T  2822271 aatatgaaatagaaaattattataaaatggttgtacaaatatcatttctc 2822222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 3339533 - 3339570
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  3339533 aaagttgtcacaaaatggttgtacaaatatcatttctc 3339570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 15666807 - 15666844
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  15666807 aaagttgtcagaaaatggttgtacaaatatcatttctc 15666844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 19789110 - 19789147
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  19789110 aaagttgtaataaaatggttgtacaaatatcatttctc 19789147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 21857605 - 21857638
Alignment:
Q  19 ttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||| |||||||||||||||||||||    
T  21857605 ttgtcataaaatggttgtacaaatatcatttctc 21857638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 29376749 - 29376794
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctcctttaaaa 60  Q
    |||||||||| ||||| |||||| |||||||||||||| |||||||    
T  29376749 aaagttgtcacaaaatggttgtaaaaatatcatttctcatttaaaa 29376794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 32729926 - 32729889
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  32729926 aaagttgtcagaaaatggttgtacaaatatcatttctc 32729889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 2060646 - 2060706
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctcctt-taaaatttg 64  Q
    ||||||| | |||||||||||||||| ||| | ||||||||||||||| || |||||||||    
T  2060646 tatgagagaaaaagttgtcataaaatggttattcaaatatcatttctctttgtaaaatttg 2060706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 10375704 - 10375660
Alignment:
Q  8 gagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||| ||| |||||||||||||| |||||||| ||||||||||||    
T  10375704 gagagagagagttgtcataaaatagttgtacacatatcatttctc 10375660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 32621838 - 32621802
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    |||||||||||||||| |||||| |||||||||||||    
T  32621838 aaagttgtcataaaatggttgtataaatatcatttct 32621802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 35077160 - 35077124
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  35077160 aaagttgtcaaaaaattgttgttcaaatatcatttct 35077124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 31613 - 31660
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  31613 tatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctc 31660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 37392141 - 37392188
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  37392141 tatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctc 37392188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 5502420 - 5502371
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| |||||||||||| ||| | |||||||||||||||||||||    
T  5502420 aatatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 5502371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 11138954 - 11138910
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcattt 49  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||||    
T  11138954 tatgagagagaaagttgtcacaaaatagttgtacaaatatcattt 11138910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 44103823 - 44103775
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctcc 53  Q
    ||||||| |||||||||||||||| | ||||||||||||| ||||||||    
T  44103823 tatgagagagaaagttgtcataaagtggttgtacaaatataatttctcc 44103775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 1796543 - 1796496
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||||    
T  1796543 tatgagaaagaaagttgtcacaaagtggttgtacaaatatcatttctc 1796496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 7598745 - 7598702
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctcctttaa 58  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||    
T  7598745 aaagttgtcaaaaaatggttgttcaaatatcatttctcctttaa 7598702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 14233657 - 14233704
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||| | ||||| |||||||||||||||||||||    
T  14233657 tatgagagagaaagttgtaaaaaaatagttgtacaaatatcatttctc 14233704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 16487649 - 16487610
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||||| ||||| |||||||||||||||    
T  16487649 agaaagttgtcataaaatggttgttcaaatatcatttctc 16487610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 40413362 - 40413409
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| |||||  ||||||||||||||||||||    
T  40413362 tatgagagagaaagttgtcacaaaataattgtacaaatatcatttctc 40413409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 56
Target Start/End: Complemental strand, 1775352 - 1775322
Alignment:
Q  26 aaaattgttgtacaaatatcatttctccttt 56  Q
    |||||||||||||||||||||||||||||||    
T  1775352 aaaattgttgtacaaatatcatttctccttt 1775322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 6161982 - 6161948
Alignment:
Q  18 gttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||||||| |||||||||||||||||||||    
T  6161982 gttgtcataaaatggttgtacaaatatcatttctc 6161948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 9047084 - 9047130
Alignment:
Q  6 atgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||| |||||||||||| ||| | |||||||||||||||||||||    
T  9047084 atgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctc 9047130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 32020478 - 32020524
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    ||||||| |||||||| ||| ||||| ||||||||||||||||||||    
T  32020478 tatgagagagaaagttatcaaaaaatggttgtacaaatatcatttct 32020524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 39211100 - 39211054
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    ||||||| |||||||||||| ||||| ||||| ||||||||||||||    
T  39211100 tatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 39211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 40604738 - 40604776
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctcc 53  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  40604738 aaagttgtcagaaaattgttgtacagatatcatttctcc 40604776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 44330981 - 44330943
Alignment:
Q  8 gagatagaaagttgtcataaaattgttgtacaaatatca 46  Q
    |||| ||| ||||||||||||||||||||||||||||||    
T  44330981 gagagagagagttgtcataaaattgttgtacaaatatca 44330943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 9985712 - 9985749
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| | |||||||||||||||||||    
T  9985712 aaagttgtcataaaatagatgtacaaatatcatttctc 9985749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 14531658 - 14531621
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  14531658 aaagttatcataaaatagttgtacaaatatcatttctc 14531621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 30925665 - 30925714
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| ||||||||||||||||   ||||| |||||||||||||||    
T  30925665 aatatgagagagaaagttgtcataaatcggttgtccaaatatcatttctc 30925714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 36497698 - 36497661
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  36497698 aaagttgtcacaaaatagttgtacaaatatcatttctc 36497661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 36969711 - 36969748
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  36969711 aaagttgtaataaaattgttttacaaatatcatttctc 36969748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 38844824 - 38844861
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  38844824 aaagttgtcacaaaatggttgtacaaatatcatttctc 38844861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 40380318 - 40380281
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| | |||||||||||||||||||    
T  40380318 aaagttgtcataaaatagatgtacaaatatcatttctc 40380281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 42569739 - 42569788
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| ||||||||||||||||||   ||| |||||||||||||||    
T  42569739 aatatgagagagaaagttgtcataaaatgaatgttcaaatatcatttctc 42569788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 44607747 - 44607702
Alignment:
Q  6 atgagatagaaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    |||||| ||||||||||||  |||| ||||||||||||||||||||    
T  44607747 atgagagagaaagttgtcaccaaatggttgtacaaatatcatttct 44607702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 157114 - 157070
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcattt 49  Q
    ||||||| |||||||||||  ||||| ||||||||||||||||||    
T  157114 tatgagagagaaagttgtcgcaaaatggttgtacaaatatcattt 157070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 11789849 - 11789802
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcatttctcctttaaaat 61  Q
    |||||||||||||||| |  ||||||||||||||||||| |||||||||    
T  11789849 agaaagttgtcataaagtgtttgtacaaatatcatttct-ctttaaaat 11789802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 12732881 - 12732841
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcatttctcc 53  Q
    |||||||||||| ||| | ||||||||||||||||||||||    
T  12732881 agaaagttgtcacaaagtggttgtacaaatatcatttctcc 12732841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 14710906 - 14710950
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcattt 49  Q
    ||||||| |||||||||||| |||||  |||||||||||||||||    
T  14710906 tatgagagagaaagttgtcacaaaatgattgtacaaatatcattt 14710950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 20852949 - 20852917
Alignment:
Q  22 tcataaaattgttgtacaaatatcatttctcct 54  Q
    ||||||||| |||||||||||||||||||||||    
T  20852949 tcataaaatggttgtacaaatatcatttctcct 20852917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 21273745 - 21273781
Alignment:
Q  16 aagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  21273745 aagttgtcacaaaatggttgtacaaatatcatttctc 21273781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 26000596 - 26000552
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcattt 49  Q
    ||||||| | |||||||||||||||| |||||| |||||||||||    
T  26000596 tatgagagataaagttgtcataaaatggttgtaaaaatatcattt 26000552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 36874131 - 36874175
Alignment:
Q  13 agaaagttgtcataaaattgttgtacaaatatcatttctccttta 57  Q
    ||||| |||||| ||||||||||| ||||||||||||||| ||||    
T  36874131 agaaaattgtcaaaaaattgttgttcaaatatcatttctctttta 36874175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 42689885 - 42689841
Alignment:
Q  8 gagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||| ||||| | |||||||||| |||||||||||||||||||||    
T  42689885 gagagagaaaatcgtcataaaatggttgtacaaatatcatttctc 42689841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 13734373 - 13734420
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||||||| | |||||||||||||||||||||    
T  13734373 tatgagagagaaagttgtcataaagtggttgtacaaatatcatttctc 13734420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 14206447 - 14206400
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  14206447 tatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctc 14206400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 12878805 - 12878756
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| |||||||| | ||||||| |||||||||||||||||||||    
T  12878805 aatatgagagagaaagttataataaaatggttgtacaaatatcatttctc 12878756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 16143431 - 16143390
Alignment:
Q  11 atagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  16143431 atagaaagttgtcacaaaatggttgtacaaatatcatttctc 16143390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 43153071 - 43153120
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||||||    
T  43153071 aatatgagagagaaagttgtacaaaaattgttgtacaaatatcatttctc 43153120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 372733 - 372780
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||||| |||||||||| ||||||||||    
T  372733 tatgagagagaaagttgtcacaaaatggttgtacaaaaatcatttctc 372780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 6865800 - 6865847
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||||    
T  6865800 tatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 6865847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 2629855 - 2629817
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctcc 53  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  2629855 aaagttgtcaaaaaatggttgtacaaatatcatttctcc 2629817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 4098672 - 4098626
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcattt 49  Q
    ||||||||| | |||||||||| ||||| ||||||||||||||||||    
T  4098672 aatatgagagataaagttgtcacaaaatagttgtacaaatatcattt 4098626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 8897416 - 8897382
Alignment:
Q  18 gttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||||||| |||||||||||||||||||||    
T  8897416 gttgtcataaaatggttgtacaaatatcatttctc 8897382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 9065468 - 9065434
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcattt 49  Q
    |||||||||||||||| ||||||||||||||||||    
T  9065468 aaagttgtcataaaatggttgtacaaatatcattt 9065434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 33910101 - 33910147
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttct 51  Q
    ||||||| |||||||||||| ||||| |||| |||||||||||||||    
T  33910101 tatgagagagaaagttgtcaaaaaatggttgaacaaatatcatttct 33910147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 4835040 - 4835089
Alignment:
Q  3 aatatgagatagaaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    ||||||||| |||| ||||||||||| | ||||||||||| |||||||||    
T  4835040 aatatgagagagaaggttgtcataaagtggttgtacaaatgtcatttctc 4835089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 7144614 - 7144577
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  7144614 aaagttatcataaaatggttgtacaaatatcatttctc 7144577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 14914409 - 14914372
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  14914409 aaagttgtcacaaaatggttgtacaaatatcatttctc 14914372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 29803262 - 29803225
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  29803262 aaagttgtcaaaaaatagttgtacaaatatcatttctc 29803225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 31708407 - 31708370
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  31708407 aaagttgttataaaatggttgtacaaatatcatttctc 31708370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 34428197 - 34428160
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  34428197 aaagttgtcaaaaaatagttgtacaaatatcatttctc 34428160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 42699094 - 42699057
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  42699094 aaagttgtcacaaaatggttgtacaaatatcatttctc 42699057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 4434529 - 4434477
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcatttctccttta 57  Q
    ||||||| | ||| |||||| ||||| ||||||||||||||||||||| ||||    
T  4434529 tatgagagaaaaaattgtcaaaaaatggttgtacaaatatcatttctctttta 4434477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 33567236 - 33567280
Alignment:
Q  5 tatgagatagaaagttgtcataaaattgttgtacaaatatcattt 49  Q
    ||||||| |||||||||||| ||| | ||||||||||||||||||    
T  33567236 tatgagagagaaagttgtcacaaagtggttgtacaaatatcattt 33567280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 19725 - 19763
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctcc 53  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  19725 aaagttgtcacaaaatagttgtacaaatatcatttctcc 19763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 4352 - 4315
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  4352 aaagttatcataaaatggttgtacaaatatcatttctc 4315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 1115 - 1078
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  1115 aaagttgtcacaaaatagttgtacaaatatcatttctc 1078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 60506 - 60469
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  60506 aaagttgtaataaaatggttgtacaaatatcatttctc 60469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 155943 - 155906
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  155943 aaagttgtaataaaatggttgtacaaatatcatttctc 155906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 337155 - 337118
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  337155 aaagttgtcagaaaatggttgtacaaatatcatttctc 337118  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 6464 - 6427
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||||| | |||||||||||||||||||    
T  6464 aaagttgtcataaaatggatgtacaaatatcatttctc 6427  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 440755 - 440718
Alignment:
Q  15 aaagttgtcataaaattgttgtacaaatatcatttctc 52  Q
    |||||||||||||| | |||||||||||||||||||||    
T  440755 aaagttgtcataaagtagttgtacaaatatcatttctc 440718  T

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Target: scaffold0046 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 88378 - 88417
Alignment:
Q  25 taaaattgttgtacaaatatcatttctcctttaaaatttgt 65  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  88378 taaaattgttatacaaatatcatttct-ctttaaaatttgt 88417  T

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