View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_117 (Length: 292)
Name: NF10233A_low_117
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_117 |
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Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 13669408 - 13669681
Alignment:
| Q |
1 |
tcaaagggcaataacaaaaaacagttttcaagcgacgatgaagcatcaccaagagcaatactagatgcccctgtttcaggaacagagtcagacaatagtg |
100 |
Q |
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| T |
13669408 |
tcaaagggcaataacaaaaaacagttttcaagcgacgatgaagcatcaccaagagcaatactagatgcccctgtttcaggaacagagtcagacaatagtg |
13669507 |
T |
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| Q |
101 |
gaagcagcagtttctcctcgtactcatcggagaattcaccaccggtggagggaaaactaggttggaaggaaagtaacatgatgcaatggaaatcaatgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13669508 |
gaagcagcagtttctcctcgtactcatcggagaattcaccaccggtggagggaaaattaggttggaaggaaagtaacatgatgcaatggaaatcaatgat |
13669607 |
T |
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| Q |
201 |
tgatgttttcaagttcaagtcagtgagaagattgacagctattccattgcttgctgctgttaacaatgatattg |
274 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
13669608 |
tgatgttttcaagttcaagtcagtgagaagattaacagctattccattgcttgctgctgttaacaatgatattg |
13669681 |
T |
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