View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_131 (Length: 283)
Name: NF10233A_low_131
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_131 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 16 - 283
Target Start/End: Original strand, 44951938 - 44952205
Alignment:
| Q |
16 |
tgaacatttaaagtgctaagttaacgaagggtgaatggctgagttacatggtttataataaaaaatcaagacaaatactaagaagtatacataaaaataa |
115 |
Q |
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| T |
44951938 |
tgaacatttaaagtgctaagttaacgaagggtgaatggctgagttacatggtgtataataaaaaatcaagacaaatactaagaagtatacataaaaataa |
44952037 |
T |
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| Q |
116 |
aggatttatggtagtcgtatgttataggacccatcgtgtatagagaagtaagattcatttaagatatacatattgcacatttatcaaatacacatttact |
215 |
Q |
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| T |
44952038 |
atgatttatggtagtcgtatgttataggacccatcgtgtatagagaagtaagattcacttaagatatacatattgcacatttatcaaatacacatttact |
44952137 |
T |
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| Q |
216 |
taggaacacgcatgttcacttgatacttctatttcacattttggtaacatttctaacttcagacaaaa |
283 |
Q |
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| T |
44952138 |
tagaaacacgcatgttcacttgatacttctatttcacattttggtaacatttctaacttcagacaaaa |
44952205 |
T |
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