View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10233A_low_146 (Length: 272)

Name: NF10233A_low_146
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10233A_low_146
NF10233A_low_146
[»] chr4 (90 HSPs)
chr4 (1-264)||(5672988-5673274)
chr4 (94-264)||(5670670-5670840)
chr4 (94-263)||(34017642-34017809)
chr4 (98-263)||(40616669-40616836)
chr4 (97-263)||(27014357-27014522)
chr4 (94-263)||(24150766-24150937)
chr4 (131-255)||(48637607-48637731)
chr4 (131-263)||(52530832-52530963)
chr4 (94-263)||(5706486-5706657)
chr4 (94-263)||(15432172-15432344)
chr4 (94-263)||(19859362-19859550)
chr4 (131-263)||(39501742-39501873)
chr4 (94-181)||(19864255-19864342)
chr4 (131-263)||(39498403-39498534)
chr4 (25-99)||(34319684-34319758)
chr4 (94-260)||(53094605-53094772)
chr4 (25-99)||(18911787-18911861)
chr4 (25-99)||(40902840-40902914)
chr4 (94-261)||(56195623-56195789)
chr4 (23-99)||(52530698-52530774)
chr4 (25-99)||(15432362-15432436)
chr4 (34-99)||(44808731-44808796)
chr4 (34-99)||(48637788-48637853)
chr4 (23-99)||(12238540-12238616)
chr4 (189-263)||(11195769-11195843)
chr4 (25-99)||(27676812-27676886)
chr4 (25-99)||(29325104-29325178)
chr4 (25-99)||(34017550-34017624)
chr4 (25-99)||(40616573-40616647)
chr4 (42-99)||(5670858-5670915)
chr4 (147-263)||(3797723-3797836)
chr4 (188-264)||(18673035-18673111)
chr4 (25-99)||(27014543-27014617)
chr4 (94-261)||(34319776-34319943)
chr4 (198-263)||(15445328-15445393)
chr4 (198-263)||(19827509-19827574)
chr4 (94-261)||(29324921-29325086)
chr4 (196-263)||(19864478-19864545)
chr4 (25-99)||(24150955-24151028)
chr4 (94-261)||(33927068-33927235)
chr4 (25-99)||(38283247-38283320)
chr4 (198-263)||(12782998-12783063)
chr4 (198-263)||(19820821-19820886)
chr4 (147-263)||(33408228-33408345)
chr4 (198-263)||(38283452-38283517)
chr4 (198-263)||(40903046-40903111)
chr4 (198-263)||(52006494-52006559)
chr4 (208-263)||(40795096-40795151)
chr4 (208-263)||(44164876-44164931)
chr4 (94-261)||(44808814-44808981)
chr4 (198-263)||(15429819-15429884)
chr4 (198-263)||(15436433-15436498)
chr4 (26-71)||(15445120-15445165)
chr4 (214-263)||(37103195-37103244)
chr4 (147-263)||(12238359-12238474)
chr4 (197-260)||(15405043-15405106)
chr4 (212-263)||(18911592-18911643)
chr4 (189-264)||(21419881-21419956)
chr4 (189-264)||(25962151-25962226)
chr4 (189-260)||(46955432-46955503)
chr4 (189-264)||(53009512-53009587)
chr4 (209-260)||(56198950-56199001)
chr4 (142-252)||(5681532-5681640)
chr4 (57-99)||(5706675-5706717)
chr4 (189-263)||(35510085-35510159)
chr4 (94-179)||(22172233-22172318)
chr4 (214-263)||(49270773-49270822)
chr4 (197-261)||(15812098-15812162)
chr4 (33-89)||(25962351-25962407)
chr4 (189-260)||(30392665-30392736)
chr4 (189-264)||(40493321-40493396)
chr4 (25-99)||(12786403-12786480)
chr4 (24-81)||(18672847-18672903)
chr4 (198-263)||(24044104-24044169)
chr4 (198-263)||(27677018-27677083)
chr4 (39-92)||(30392861-30392914)
chr4 (192-252)||(8871722-8871782)
chr4 (192-260)||(8877457-8877525)
chr4 (40-92)||(11195962-11196014)
chr4 (198-263)||(48415488-48415557)
chr4 (40-92)||(53009336-53009388)
chr4 (220-263)||(3719217-3719260)
chr4 (189-260)||(29544828-29544899)
chr4 (25-71)||(44165100-44165147)
chr4 (25-92)||(46955244-46955309)
chr4 (25-71)||(15429610-15429656)
chr4 (25-71)||(15436224-15436270)
chr4 (25-71)||(17670617-17670662)
chr4 (24-89)||(21420081-21420145)
chr4 (33-81)||(40493140-40493188)
[»] chr2 (80 HSPs)
chr2 (94-263)||(9185284-9185453)
chr2 (94-263)||(9188512-9188681)
chr2 (94-263)||(29440571-29440740)
chr2 (94-263)||(37279536-37279705)
chr2 (25-263)||(25959457-25959717)
chr2 (94-263)||(8888712-8888881)
chr2 (94-264)||(25870859-25871029)
chr2 (94-263)||(25874257-25874426)
chr2 (97-263)||(30274631-30274797)
chr2 (94-263)||(24235172-24235345)
chr2 (34-263)||(24238444-24238700)
chr2 (94-180)||(45499218-45499303)
chr2 (131-263)||(11347793-11347924)
chr2 (23-99)||(8888899-8888975)
chr2 (25-99)||(11347662-11347736)
chr2 (25-99)||(30274536-30274610)
chr2 (25-254)||(33310752-33311003)
chr2 (25-99)||(25871047-25871121)
chr2 (95-157)||(40677620-40677682)
chr2 (34-99)||(45499135-45499200)
chr2 (27-99)||(25874444-25874516)
chr2 (94-261)||(31427401-31427568)
chr2 (94-263)||(36808303-36808471)
chr2 (188-264)||(1386376-1386452)
chr2 (189-264)||(12219871-12219946)
chr2 (36-99)||(29440758-29440821)
chr2 (25-99)||(10601116-10601190)
chr2 (159-263)||(22021144-22021251)
chr2 (34-99)||(24235363-24235428)
chr2 (94-261)||(38015597-38015763)
chr2 (198-263)||(40781548-40781613)
chr2 (188-260)||(16790711-16790783)
chr2 (147-263)||(25138845-25138960)
chr2 (188-263)||(9966323-9966398)
chr2 (188-263)||(27266865-27266940)
chr2 (189-264)||(40259094-40259169)
chr2 (189-263)||(3875363-3875437)
chr2 (209-263)||(13971869-13971923)
chr2 (25-99)||(38015781-38015855)
chr2 (94-261)||(45457240-45457407)
chr2 (198-263)||(5666594-5666658)
chr2 (34-99)||(9185201-9185266)
chr2 (34-99)||(9188429-9188494)
chr2 (198-263)||(13137017-13137082)
chr2 (198-263)||(31585904-31585969)
chr2 (198-263)||(43207854-43207919)
chr2 (198-263)||(43723776-43723841)
chr2 (189-264)||(37937174-37937249)
chr2 (25-99)||(42368466-42368541)
chr2 (196-263)||(45493118-45493185)
chr2 (196-263)||(45500860-45500927)
chr2 (189-263)||(22630917-22630991)
chr2 (25-99)||(37279445-37279518)
chr2 (203-260)||(6826850-6826907)
chr2 (198-251)||(15470546-15470599)
chr2 (40-92)||(23205445-23205497)
chr2 (40-92)||(23677049-23677101)
chr2 (39-99)||(40677541-40677601)
chr2 (198-261)||(5105805-5105868)
chr2 (212-263)||(16179203-16179254)
chr2 (97-263)||(25820706-25820875)
chr2 (25-92)||(40258905-40258971)
chr2 (208-263)||(42368685-42368740)
chr2 (94-261)||(45453952-45454119)
chr2 (39-92)||(16179418-16179471)
chr2 (92-164)||(34682872-34682944)
chr2 (33-92)||(1386198-1386256)
chr2 (39-90)||(22631119-22631170)
chr2 (25-99)||(40781745-40781822)
chr2 (40-92)||(12220071-12220123)
chr2 (39-90)||(3875564-3875615)
chr2 (25-71)||(25138692-25138739)
chr2 (33-84)||(37936993-37937044)
chr2 (189-263)||(17877182-17877256)
chr2 (24-84)||(43207650-43207712)
chr2 (35-99)||(3252595-3252658)
chr2 (94-122)||(15470685-15470713)
chr2 (25-77)||(16790524-16790575)
chr2 (151-263)||(26366010-26366121)
chr2 (25-99)||(45457425-45457502)
[»] chr3 (115 HSPs)
chr3 (22-263)||(2873743-2874008)
chr3 (94-263)||(30690915-30691084)
chr3 (24-263)||(54723921-54724183)
chr3 (94-263)||(11190706-11190875)
chr3 (25-263)||(539006-539267)
chr3 (94-263)||(6922699-6922869)
chr3 (94-263)||(53816007-53816178)
chr3 (97-260)||(28266099-28266264)
chr3 (94-263)||(7486750-7486920)
chr3 (94-260)||(6434622-6434790)
chr3 (97-263)||(24125678-24125845)
chr3 (97-263)||(24128955-24129122)
chr3 (97-263)||(23298462-23298630)
chr3 (94-263)||(32287163-32287338)
chr3 (94-263)||(18641616-18641787)
chr3 (94-263)||(18644612-18644783)
chr3 (94-168)||(12541145-12541219)
chr3 (147-264)||(8461387-8461503)
chr3 (25-99)||(35412872-35412946)
chr3 (97-255)||(43809767-43809930)
chr3 (94-157)||(3306057-3306120)
chr3 (34-263)||(16184445-16184702)
chr3 (25-99)||(23298366-23298441)
chr3 (95-157)||(28327652-28327714)
chr3 (95-157)||(28330977-28331039)
chr3 (25-99)||(50461303-50461377)
chr3 (34-99)||(10106362-10106427)
chr3 (34-99)||(24125866-24125931)
chr3 (25-99)||(30691102-30691177)
chr3 (25-99)||(12541053-12541127)
chr3 (198-263)||(20728597-20728662)
chr3 (34-99)||(24129143-24129208)
chr3 (34-99)||(43927216-43927281)
chr3 (94-261)||(50461395-50461561)
chr3 (25-93)||(11190899-11190967)
chr3 (25-99)||(7486938-7487013)
chr3 (189-264)||(17528702-17528777)
chr3 (189-264)||(22416775-22416850)
chr3 (189-263)||(37408860-37408934)
chr3 (198-263)||(2775661-2775726)
chr3 (198-263)||(2778904-2778969)
chr3 (34-99)||(6922887-6922952)
chr3 (198-263)||(16244052-16244117)
chr3 (198-263)||(25584856-25584921)
chr3 (198-263)||(45896560-45896625)
chr3 (147-263)||(10106499-10106614)
chr3 (188-264)||(12561174-12561250)
chr3 (188-263)||(27092073-27092148)
chr3 (188-263)||(28008011-28008086)
chr3 (189-264)||(46885118-46885193)
chr3 (189-264)||(52990878-52990953)
chr3 (25-99)||(2775861-2775935)
chr3 (25-99)||(2779103-2779177)
chr3 (23-99)||(6434525-6434604)
chr3 (198-263)||(29343824-29343889)
chr3 (198-263)||(43927014-43927079)
chr3 (95-261)||(47051677-47051843)
chr3 (34-99)||(53816196-53816261)
chr3 (35-99)||(8461257-8461321)
chr3 (203-263)||(10881659-10881719)
chr3 (212-263)||(10885036-10885087)
chr3 (212-263)||(11784945-11784996)
chr3 (189-264)||(17531597-17531672)
chr3 (189-264)||(25442800-25442875)
chr3 (188-254)||(32367070-32367136)
chr3 (198-255)||(10902127-10902184)
chr3 (198-263)||(49742869-49742934)
chr3 (198-263)||(52309565-52309630)
chr3 (147-263)||(54461194-54461311)
chr3 (39-99)||(28327733-28327793)
chr3 (39-99)||(28331058-28331118)
chr3 (188-263)||(17039962-17040037)
chr3 (56-99)||(28266285-28266328)
chr3 (208-263)||(31549351-31549406)
chr3 (25-92)||(48063791-48063857)
chr3 (189-264)||(48063976-48064051)
chr3 (39-89)||(15195109-15195159)
chr3 (189-263)||(17141587-17141661)
chr3 (57-99)||(18641556-18641598)
chr3 (25-99)||(18644523-18644594)
chr3 (197-255)||(35751628-35751686)
chr3 (190-263)||(30219947-30220020)
chr3 (147-263)||(35412689-35412806)
chr3 (39-92)||(46885290-46885343)
chr3 (94-261)||(47055107-47055274)
chr3 (212-261)||(55031960-55032009)
chr3 (212-261)||(55034820-55034869)
chr3 (203-263)||(3840696-3840756)
chr3 (203-263)||(41977180-41977240)
chr3 (212-264)||(54720149-54720201)
chr3 (208-251)||(9392925-9392968)
chr3 (25-92)||(17528513-17528579)
chr3 (41-92)||(17531423-17531474)
chr3 (24-71)||(22993449-22993496)
chr3 (212-263)||(52200092-52200143)
chr3 (39-89)||(34983554-34983604)
chr3 (25-99)||(2784394-2784469)
chr3 (24-81)||(25442612-25442668)
chr3 (39-92)||(54720350-54720403)
chr3 (33-81)||(32366890-32366938)
chr3 (212-264)||(34983817-34983869)
chr3 (33-92)||(11785151-11785210)
chr3 (24-71)||(18883530-18883576)
chr3 (34-99)||(25585053-25585120)
chr3 (24-99)||(52200282-52200360)
chr3 (94-144)||(19301113-19301163)
chr3 (94-164)||(19304539-19304608)
chr3 (103-164)||(22993554-22993615)
chr3 (189-234)||(25486341-25486386)
chr3 (25-54)||(28266342-28266371)
chr3 (34-83)||(52991085-52991134)
chr3 (192-260)||(3292903-3292970)
chr3 (24-52)||(3840942-3840970)
chr3 (212-260)||(22993660-22993708)
chr3 (34-99)||(45896757-45896826)
[»] chr1 (43 HSPs)
chr1 (25-263)||(28111152-28111413)
chr1 (24-263)||(2794323-2794585)
chr1 (94-263)||(20398949-20399118)
chr1 (131-263)||(23021819-23021951)
chr1 (95-264)||(3796687-3796855)
chr1 (97-263)||(49498363-49498525)
chr1 (24-99)||(27536297-27536372)
chr1 (93-261)||(37183722-37183889)
chr1 (24-99)||(23021686-23021761)
chr1 (25-99)||(20448115-20448189)
chr1 (25-99)||(20533882-20533956)
chr1 (95-157)||(23441132-23441194)
chr1 (94-261)||(27536390-27536557)
chr1 (34-99)||(1950222-1950287)
chr1 (94-260)||(45960604-45960769)
chr1 (24-99)||(49498267-49498342)
chr1 (25-99)||(31205120-31205194)
chr1 (25-99)||(45960512-45960586)
chr1 (188-264)||(673023-673099)
chr1 (119-261)||(31204936-31205076)
chr1 (198-263)||(45941512-45941577)
chr1 (96-254)||(34732221-34732379)
chr1 (198-264)||(2405604-2405670)
chr1 (33-99)||(3796602-3796668)
chr1 (198-263)||(21107254-21107319)
chr1 (198-263)||(21111121-21111186)
chr1 (198-263)||(21114461-21114526)
chr1 (188-263)||(905638-905713)
chr1 (212-263)||(1950432-1950483)
chr1 (25-99)||(37183631-37183705)
chr1 (198-263)||(21018430-21018495)
chr1 (23-99)||(6070723-6070799)
chr1 (94-177)||(30938422-30938505)
chr1 (44-99)||(20399136-20399191)
chr1 (189-263)||(29643175-29643249)
chr1 (31-99)||(45941709-45941779)
chr1 (39-99)||(23441053-23441113)
chr1 (212-263)||(41058279-41058330)
chr1 (203-261)||(6070921-6070979)
chr1 (56-98)||(33898615-33898657)
chr1 (41-92)||(905463-905514)
chr1 (39-86)||(27354719-27354766)
chr1 (103-162)||(27355173-27355232)
[»] chr8 (54 HSPs)
chr8 (94-263)||(10663990-10664159)
chr8 (94-263)||(16953868-16954036)
chr8 (94-260)||(25591338-25591504)
chr8 (94-263)||(45155128-45155297)
chr8 (107-263)||(38248270-38248427)
chr8 (95-263)||(25231172-25231342)
chr8 (94-261)||(18824254-18824420)
chr8 (94-261)||(18825747-18825913)
chr8 (147-263)||(18721193-18721309)
chr8 (97-255)||(23643919-23644078)
chr8 (24-99)||(16954054-16954129)
chr8 (24-99)||(23597486-23597561)
chr8 (25-99)||(10664230-10664303)
chr8 (25-99)||(18825655-18825729)
chr8 (188-264)||(10498167-10498243)
chr8 (189-264)||(23619318-23619393)
chr8 (25-99)||(25591245-25591320)
chr8 (37-99)||(5584211-5584273)
chr8 (165-263)||(12516383-12516480)
chr8 (34-99)||(18721062-18721127)
chr8 (198-263)||(20887626-20887691)
chr8 (198-261)||(5584359-5584422)
chr8 (25-92)||(8911937-8912003)
chr8 (196-263)||(14421837-14421904)
chr8 (25-99)||(18824162-18824236)
chr8 (189-263)||(21279723-21279797)
chr8 (183-263)||(13196948-13197028)
chr8 (197-261)||(36710598-36710662)
chr8 (189-264)||(31284764-31284839)
chr8 (189-264)||(44027047-44027122)
chr8 (25-91)||(10498016-10498081)
chr8 (198-263)||(25594620-25594685)
chr8 (214-263)||(33883329-33883378)
chr8 (24-92)||(31284962-31285029)
chr8 (192-263)||(5980270-5980341)
chr8 (188-263)||(17931072-17931147)
chr8 (34-99)||(20887823-20887889)
chr8 (198-260)||(22173886-22173948)
chr8 (189-263)||(33419747-33419821)
chr8 (39-92)||(44026869-44026922)
chr8 (197-261)||(14589583-14589647)
chr8 (94-133)||(5584291-5584330)
chr8 (189-263)||(2560644-2560718)
chr8 (198-263)||(12583099-12583167)
chr8 (25-99)||(22173700-22173773)
chr8 (39-84)||(2560851-2560896)
chr8 (25-99)||(30645760-30645835)
chr8 (212-264)||(8911739-8911791)
chr8 (41-92)||(13197148-13197198)
chr8 (39-93)||(17931272-17931326)
chr8 (195-249)||(30785025-30785079)
chr8 (56-93)||(21279562-21279599)
chr8 (39-92)||(33419944-33419997)
chr8 (25-81)||(23619131-23619186)
[»] chr6 (67 HSPs)
chr6 (94-263)||(2379326-2379495)
chr6 (25-263)||(9954059-9954319)
chr6 (94-263)||(11402353-11402524)
chr6 (97-263)||(23384612-23384780)
chr6 (97-261)||(26942295-26942461)
chr6 (131-263)||(3596677-3596809)
chr6 (24-263)||(1125501-1125763)
chr6 (94-263)||(14281377-14281548)
chr6 (95-263)||(13005285-13005455)
chr6 (94-164)||(5737921-5737991)
chr6 (25-99)||(30655740-30655814)
chr6 (34-99)||(23381946-23382011)
chr6 (34-99)||(23384526-23384591)
chr6 (188-264)||(18855978-18856054)
chr6 (147-263)||(22561077-22561191)
chr6 (94-240)||(2372448-2372596)
chr6 (94-260)||(2846403-2846569)
chr6 (192-263)||(9839351-9839422)
chr6 (189-264)||(24400274-24400349)
chr6 (189-264)||(24410393-24410468)
chr6 (189-264)||(26896213-26896288)
chr6 (189-263)||(4512572-4512646)
chr6 (33-99)||(26942208-26942274)
chr6 (198-263)||(30655540-30655605)
chr6 (188-260)||(7128398-7128470)
chr6 (188-264)||(13947113-13947189)
chr6 (188-264)||(24155319-24155395)
chr6 (94-190)||(28107612-28107707)
chr6 (189-263)||(11125651-11125725)
chr6 (23-99)||(11187961-11188039)
chr6 (34-99)||(11402542-11402608)
chr6 (96-190)||(28111666-28111759)
chr6 (34-99)||(3596555-3596620)
chr6 (198-263)||(17106573-17106638)
chr6 (32-99)||(5737836-5737903)
chr6 (196-263)||(6513352-6513419)
chr6 (208-263)||(10290068-10290123)
chr6 (213-264)||(19476097-19476148)
chr6 (208-263)||(20185840-20185895)
chr6 (208-263)||(22150096-22150151)
chr6 (189-263)||(32109764-32109838)
chr6 (33-90)||(2379522-2379579)
chr6 (215-263)||(2372349-2372397)
chr6 (24-92)||(19476295-19476362)
chr6 (94-144)||(5260023-5260073)
chr6 (24-99)||(34502627-34502703)
chr6 (34-83)||(24155139-24155188)
chr6 (40-92)||(24410591-24410643)
chr6 (40-99)||(11729112-11729171)
chr6 (196-251)||(28107748-28107803)
chr6 (198-263)||(5738042-5738112)
chr6 (39-92)||(4512770-4512823)
chr6 (24-81)||(13947317-13947373)
chr6 (198-262)||(23847865-23847932)
chr6 (212-264)||(28230689-28230742)
chr6 (33-81)||(7128602-7128650)
chr6 (33-81)||(18855798-18855846)
chr6 (34-70)||(23008373-23008409)
chr6 (34-70)||(23779955-23779991)
chr6 (25-81)||(28230899-28230954)
chr6 (45-92)||(24400472-24400519)
chr6 (37-84)||(26896033-26896080)
chr6 (94-144)||(3826681-3826731)
chr6 (39-93)||(11125472-11125526)
chr6 (94-128)||(23008289-23008323)
chr6 (94-128)||(23780041-23780075)
chr6 (40-93)||(32109963-32110016)
[»] chr7 (62 HSPs)
chr7 (94-263)||(45286931-45287102)
chr7 (94-263)||(45290342-45290513)
chr7 (131-263)||(23224806-23224938)
chr7 (133-263)||(37415326-37415456)
chr7 (25-99)||(23224675-23224749)
chr7 (25-99)||(6603726-6603800)
chr7 (25-99)||(13449551-13449625)
chr7 (95-157)||(44017640-44017702)
chr7 (34-99)||(4543075-4543140)
chr7 (147-261)||(13449692-13449807)
chr7 (34-99)||(4547147-4547212)
chr7 (38-99)||(37415206-37415267)
chr7 (188-264)||(26136086-26136162)
chr7 (188-264)||(26144466-26144542)
chr7 (189-263)||(9132720-9132793)
chr7 (189-263)||(10345276-10345350)
chr7 (189-263)||(14683403-14683477)
chr7 (198-263)||(4546950-4547015)
chr7 (198-263)||(4595977-4596042)
chr7 (94-260)||(16165833-16165999)
chr7 (198-263)||(20594344-20594409)
chr7 (34-99)||(45286848-45286913)
chr7 (151-261)||(2441200-2441309)
chr7 (24-99)||(8277265-8277339)
chr7 (147-260)||(5242066-5242180)
chr7 (25-99)||(16166017-16166090)
chr7 (189-263)||(20080677-20080751)
chr7 (198-263)||(4542878-4542943)
chr7 (94-261)||(6603542-6603708)
chr7 (198-263)||(11919833-11919898)
chr7 (198-263)||(17730895-17730960)
chr7 (198-263)||(26557580-26557645)
chr7 (34-99)||(45290259-45290324)
chr7 (189-261)||(13842723-13842795)
chr7 (188-264)||(37166105-37166181)
chr7 (189-264)||(3067936-3068011)
chr7 (25-99)||(11919623-11919700)
chr7 (97-263)||(48645555-48645724)
chr7 (26-92)||(13842918-13842983)
chr7 (198-263)||(8277067-8277132)
chr7 (211-263)||(4695562-4695614)
chr7 (39-99)||(44017561-44017621)
chr7 (189-264)||(10469224-10469299)
chr7 (198-263)||(9271433-9271498)
chr7 (198-261)||(9864694-9864757)
chr7 (216-263)||(35961172-35961219)
chr7 (25-99)||(2441049-2441116)
chr7 (23-81)||(26135897-26135954)
chr7 (94-261)||(11397915-11398080)
chr7 (39-84)||(20080499-20080544)
chr7 (25-99)||(22232395-22232470)
chr7 (25-99)||(22254269-22254344)
chr7 (39-91)||(9132544-9132596)
chr7 (25-65)||(18560817-18560857)
chr7 (25-92)||(37165917-37165983)
chr7 (25-71)||(5826477-5826522)
chr7 (94-144)||(5826570-5826620)
chr7 (50-92)||(10469424-10469466)
chr7 (25-71)||(23467014-23467059)
chr7 (40-89)||(3067759-3067808)
chr7 (39-92)||(14683223-14683276)
chr7 (25-62)||(37415168-37415205)
[»] scaffold0381 (2 HSPs)
scaffold0381 (97-263)||(5261-5426)
scaffold0381 (25-99)||(5166-5240)
[»] chr5 (64 HSPs)
chr5 (25-263)||(37215139-37215396)
chr5 (94-255)||(26752560-26752721)
chr5 (136-263)||(31863809-31863936)
chr5 (94-227)||(32838007-32838142)
chr5 (97-260)||(41306388-41306552)
chr5 (97-254)||(43491859-43492017)
chr5 (25-99)||(22936707-22936781)
chr5 (94-231)||(40916016-40916155)
chr5 (151-263)||(21332596-21332708)
chr5 (25-99)||(41876521-41876595)
chr5 (24-99)||(41306292-41306367)
chr5 (94-261)||(14015998-14016164)
chr5 (97-201)||(28441314-28441419)
chr5 (188-264)||(12058445-12058521)
chr5 (188-263)||(18952787-18952862)
chr5 (188-263)||(20055868-20055943)
chr5 (25-99)||(31863997-31864072)
chr5 (24-99)||(42063211-42063288)
chr5 (34-99)||(26752477-26752542)
chr5 (190-263)||(26895559-26895632)
chr5 (198-263)||(33552215-33552280)
chr5 (198-263)||(41876727-41876792)
chr5 (203-263)||(30066403-30066463)
chr5 (208-263)||(7271110-7271165)
chr5 (189-264)||(12088051-12088126)
chr5 (188-263)||(23044236-23044311)
chr5 (25-99)||(32838160-32838235)
chr5 (189-264)||(34132937-34133012)
chr5 (189-264)||(34143168-34143243)
chr5 (24-99)||(43492038-43492113)
chr5 (25-99)||(14015906-14015980)
chr5 (94-260)||(7625200-7625366)
chr5 (99-164)||(10629407-10629471)
chr5 (189-262)||(17664646-17664719)
chr5 (151-263)||(21335614-21335726)
chr5 (197-261)||(22131326-22131390)
chr5 (212-263)||(4099494-4099545)
chr5 (103-190)||(18239375-18239461)
chr5 (212-263)||(26907432-26907483)
chr5 (32-99)||(40915931-40915998)
chr5 (147-263)||(22936847-22936965)
chr5 (212-264)||(11959155-11959207)
chr5 (151-263)||(42063016-42063127)
chr5 (156-260)||(14375715-14375820)
chr5 (39-92)||(26907194-26907247)
chr5 (25-99)||(34832055-34832131)
chr5 (189-260)||(17748537-17748608)
chr5 (27-99)||(19686456-19686529)
chr5 (24-71)||(19689869-19689915)
chr5 (189-263)||(26292885-26292958)
chr5 (24-99)||(28562129-28562205)
chr5 (189-263)||(40583343-40583417)
chr5 (39-92)||(17664844-17664897)
chr5 (39-92)||(23044434-23044487)
chr5 (25-99)||(26548366-26548441)
chr5 (25-99)||(26551925-26552000)
chr5 (25-99)||(28565698-28565773)
chr5 (39-92)||(35049762-35049815)
chr5 (198-263)||(39192424-39192489)
chr5 (33-81)||(12088259-12088307)
chr5 (33-81)||(34132756-34132804)
chr5 (33-81)||(34142987-34143035)
chr5 (24-71)||(34652524-34652570)
chr5 (198-263)||(34831858-34831923)
[»] scaffold0427 (2 HSPs)
scaffold0427 (131-263)||(3684-3816)
scaffold0427 (26-99)||(3554-3627)
[»] scaffold1208 (2 HSPs)
scaffold1208 (97-263)||(279-444)
scaffold1208 (34-99)||(465-530)
[»] scaffold0250 (2 HSPs)
scaffold0250 (94-263)||(19490-19660)
scaffold0250 (25-99)||(19678-19752)
[»] scaffold2073 (1 HSPs)
scaffold2073 (94-263)||(724-895)
[»] scaffold0412 (2 HSPs)
scaffold0412 (94-263)||(225-395)
scaffold0412 (25-99)||(413-491)
[»] scaffold0962 (2 HSPs)
scaffold0962 (25-99)||(3048-3122)
scaffold0962 (147-263)||(3194-3310)
[»] scaffold0005 (2 HSPs)
scaffold0005 (25-99)||(293300-293374)
scaffold0005 (155-263)||(293117-293226)
[»] scaffold0690 (2 HSPs)
scaffold0690 (97-263)||(7573-7740)
scaffold0690 (25-99)||(7481-7552)
[»] scaffold1785 (2 HSPs)
scaffold1785 (151-263)||(1-109)
scaffold1785 (24-99)||(193-272)
[»] scaffold0035 (4 HSPs)
scaffold0035 (151-263)||(62611-62719)
scaffold0035 (24-99)||(62803-62882)
scaffold0035 (190-264)||(63952-64026)
scaffold0035 (39-92)||(64152-64205)
[»] scaffold0045 (1 HSPs)
scaffold0045 (94-261)||(89866-90033)
[»] scaffold1755 (1 HSPs)
scaffold1755 (198-263)||(215-280)
[»] scaffold0015 (1 HSPs)
scaffold0015 (198-263)||(198241-198306)
[»] scaffold0007 (2 HSPs)
scaffold0007 (198-263)||(248612-248677)
scaffold0007 (39-97)||(92723-92781)
[»] scaffold0048 (2 HSPs)
scaffold0048 (188-264)||(15505-15581)
scaffold0048 (23-81)||(15713-15770)
[»] scaffold0126 (1 HSPs)
scaffold0126 (189-260)||(14273-14344)
[»] scaffold0066 (1 HSPs)
scaffold0066 (188-263)||(57542-57617)
[»] scaffold0080 (1 HSPs)
scaffold0080 (198-263)||(27203-27268)
[»] scaffold0321 (1 HSPs)
scaffold0321 (212-264)||(2982-3034)
[»] scaffold0084 (4 HSPs)
scaffold0084 (189-264)||(19373-19448)
scaffold0084 (189-264)||(29458-29533)
scaffold0084 (25-92)||(19571-19636)
scaffold0084 (25-91)||(29651-29715)
[»] scaffold0270 (1 HSPs)
scaffold0270 (197-261)||(25-89)
[»] scaffold0191 (2 HSPs)
scaffold0191 (212-264)||(4009-4061)
scaffold0191 (39-92)||(4207-4260)
[»] scaffold0009 (1 HSPs)
scaffold0009 (208-260)||(241597-241649)
[»] scaffold0520 (1 HSPs)
scaffold0520 (208-263)||(8192-8247)
[»] scaffold0218 (2 HSPs)
scaffold0218 (189-264)||(10502-10577)
scaffold0218 (33-92)||(10698-10757)
[»] scaffold0065 (2 HSPs)
scaffold0065 (189-264)||(58635-58710)
scaffold0065 (41-99)||(58460-58518)
[»] scaffold1809 (1 HSPs)
scaffold1809 (198-251)||(171-224)
[»] scaffold1063 (1 HSPs)
scaffold1063 (147-263)||(2595-2712)
[»] scaffold0757 (1 HSPs)
scaffold0757 (198-263)||(5446-5511)
[»] scaffold0038 (2 HSPs)
scaffold0038 (188-264)||(31187-31264)
scaffold0038 (25-81)||(31396-31451)
[»] scaffold0996 (1 HSPs)
scaffold0996 (94-144)||(1779-1829)
[»] scaffold0056 (1 HSPs)
scaffold0056 (33-93)||(65094-65154)
[»] scaffold0807 (2 HSPs)
scaffold0807 (188-263)||(2026-2101)
scaffold0807 (39-84)||(1850-1895)
[»] scaffold0737 (1 HSPs)
scaffold0737 (25-99)||(7108-7184)
[»] scaffold0002 (2 HSPs)
scaffold0002 (34-71)||(99007-99044)
scaffold0002 (27-99)||(118214-118289)


Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 5673274 - 5672988
Alignment:
Q  1 tgacttaataagttgcaatctacctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat- 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  5673274 tgacttaataagttgcaatctacctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaaatatcgttcccacgaggactgtgttaatc 5673175  T
Q  100 ---atttag-------------------gatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaag 177  Q
       ||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5673174 tcaatttagcaataaggttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaag 5673075  T
Q  178 atagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5673074 atagagttggaaagaataagagagagatgcgatcaggtctttcgaatcatctatgttcccctaattggtatactgcacatattcttg 5672988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 94 - 264
Target Start/End: Complemental strand, 5670840 - 5670670
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5670840 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 5670741  T
Q  194 taagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5670740 taagagagagatgcgatcaggtctttcgaatcatctatgttcccctaattggtatactgcacatattcttg 5670670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 34017642 - 34017809
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||    
T  34017642 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaat-aacagaatataaagatag-tttggaaagaa 34017739  T
Q  194 taagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  34017740 taagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 34017809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 98 - 263
Target Start/End: Original strand, 40616669 - 40616836
Alignment:
Q  98 atatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaata 195  Q
    ||||||||||||||||||||  ||| |  ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40616669 atatttaggatgtgtaaatttcttttagttgccctaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaata 40616768  T
Q  196 agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  40616769 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 40616836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 97 - 263
Target Start/End: Complemental strand, 27014522 - 27014357
Alignment:
Q  97 aatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgg-aaagaata 195  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||| ||||||||    
T  27014522 aatatttaggatgtataaattattttagtgcctgaggcagtagttttggtttgcataaaattaaataaacaaaatataaagatagttttggaaaagaata 27014423  T
Q  196 agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  27014422 agaga--gatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 27014357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 24150937 - 24150766
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaag 191  Q
    |||||||| |||||||||||||||  ||| |  ||||  ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  24150937 gttaatatctaggatgtgtaaatttcttttagttgccctaggcagtagttttggtttgcataaaattaaataaatagaatgtaaagatagagttggaaag 24150838  T
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||| |||||| |||| |||||||||||||||||||||| |||| |||||||||||||||||||| |||||||    
T  24150837 aatgagagagagatgagatcaggtctttcgaatcatctgtgttcccctaattggtatactgcacctattctt 24150766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 131 - 255
Target Start/End: Complemental strand, 48637731 - 48637607
Alignment:
Q  131 aggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatcta 230  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||    
T  48637731 aggcagtagttttggtttgcataaaattaaataaacagaatgtaaagatagagttggagagaataagagagagatgagatcaggtctttcgaatcatcta 48637632  T
Q  231 tgttgccctaattggtatactgcac 255  Q
    |||| ||||||||||||||||||||    
T  48637631 tgtttccctaattggtatactgcac 48637607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 52530832 - 52530963
Alignment:
Q  131 aggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatcta 230  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  52530832 aggcagtagttttgatt-gcataaaattaaataaacagaatataaagatagagttggaaagaataagagagagatgagatcaggtctttcgaatcatcta 52530930  T
Q  231 tgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||||||||||||||||||| |||||||    
T  52530931 tgttcccctaattggtatactgcacctattctt 52530963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 5706657 - 5706486
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| || ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||      
T  5706657 gttaatatctaagatgtgtaaatttcttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaaaataaagatagttttggaaaat 5706558  T
Q  193 ata-agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||| |  ||| |||| ||  ||||||||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  5706557 atatatggagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 5706486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 15432344 - 15432172
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttg----gtttgcataaaattaaataaacagaatataaagatagagttgg-a 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    | |||||||||||||||||||||||| ||||||||    |||| |    
T  15432344 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttgatttgattgcataaaattaaataaacagaaaataaagatttgtttggaa 15432245  T
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    || |||||||||  |||| ||  ||||||||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  15432244 aataataagaga--gatgagactaggtctttcgagtcatcgatgttcccctaattggtatactgcacctattctt 15432172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 19859362 - 19859550
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgg-aaaga 192  Q
    |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||| |||||    
T  19859362 gttaatatctaggatgtgtaaattattttagtgtctgaggcagtagttttggtttgcataaaattaaataaacagaatataaaaatagttttggaaaaga 19859461  T
Q  193 ata------------------agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||                  |||||| |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  19859462 ataagagagagagagagagagagagagagatgagatcaggtctttcgaatcatctatgatcccctaattggtatactgcacatattctt 19859550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 131 - 263
Target Start/End: Complemental strand, 39501873 - 39501742
Alignment:
Q  131 aggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatct 229  Q
    |||||||| |||||||||||||||||  |||||||  |||| |||| |||||||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  39501873 aggcagtaattttggtttgcataaaaagtaaataat-agaaaataa-gatagagttggaaagaatgagagagagatgagatcaggtctttcgaatcatct 39501776  T
Q  230 atgttgccctaattggtatactgcacatattctt 263  Q
    ||||| |||||||||||||||||||| |||||||    
T  39501775 atgttcccctaattggtatactgcacctattctt 39501742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 19864255 - 19864342
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatag 181  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19864255 gttaatatctaggatgtgtaaattattttagtgccagaggcagtagttttggtttgcataaaattaaataaacagaatataaaaatag 19864342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 263
Target Start/End: Complemental strand, 39498534 - 39498403
Alignment:
Q  131 aggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatct 229  Q
    |||||||| |||||||||||||||||  |||||||  |||| |||| |||||||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  39498534 aggcagtaattttggtttgcataaaaagtaaataat-agaaaataa-gatagagttggaaagaatgagagagagatgagatcaggtctttcgaatcatct 39498437  T
Q  230 atgttgccctaattggtatactgcacatattctt 263  Q
    | ||| |||||||||||||||||||| |||||||    
T  39498436 aagttcccctaattggtatactgcacctattctt 39498403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 34319684 - 34319758
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  34319684 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 34319758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 260
Target Start/End: Complemental strand, 53094772 - 53094605
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    |||||||| ||||||||||||||||||||| || ||||| ||||||||||   |||||||||||||||||||||||| ||||| |||   |||||||  |    
T  53094772 gttaatatataggatgtgtaaattattttagtgtctgagacagtagtttt-tattgcataaaattaaataaacagaaaataaatatatttttggaaaaga 53094674  T
Q  194 taa-gagagggatgcgatcaggtc-tttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    ||| ||||| |||| ||||||||| |||| |||| |||| ||| |||||||||||||||||||| ||||    
T  53094673 taaggagagagatgagatcaggtcttttcaaatcctctaagttcccctaattggtatactgcacctatt 53094605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 18911861 - 18911787
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||    
T  18911861 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgtttccacgaggactgtgttaat 18911787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 40902840 - 40902914
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  40902840 tgataaatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 40902914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 56195789 - 56195623
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| |||||||||||||||  ||||| |||| ||||||||||||||| || ||||||| |||||||| ||||| |||| |||||  |||||||      
T  56195789 gttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-gcataaatttaaataa-cagaaaataa-gatagttttggaaaag 56195693  T
Q  193 ataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    | ||| |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  56195692 acaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 56195623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 52530698 - 52530774
Alignment:
Q  23 cctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  52530698 cctgatagatattttagcaagcgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 52530774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 15432436 - 15432362
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  15432436 tgatagattttttagcaagtgtacaaaatattatcgaagttgtaaaaatatcgttcccacgaggactgtgttaat 15432362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 44808731 - 44808796
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  44808731 ttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 44808796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 48637853 - 48637788
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  48637853 ttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 48637788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 12238616 - 12238540
Alignment:
Q  23 cctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||||| |||||    
T  12238616 cctgatagatattttagcaagtgtactaaataccatcgaagtagtaaaaatatcgttcccacgatgactgtattaat 12238540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 11195843 - 11195769
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||| |||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11195843 aagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 11195769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 27676812 - 27676886
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||  |||||||||||    
T  27676812 tgatagatattctagcaagtgtactaaatattatcgaagtagtaaaaatatcgttcctacgaaaactgtgttaat 27676886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 29325178 - 29325104
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||| ||||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  29325178 tgataaatattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 29325104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 34017550 - 34017624
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||| |||| |||||||||||    
T  34017550 tgatagatattttagcaagtgtattaaatactatcgaagtagtaaaaatatcgttcccgcgagcactgtgttaat 34017624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 40616573 - 40616647
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||| ||||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  40616573 tgataaatattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 40616647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 5670915 - 5670858
Alignment:
Q  42 agtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5670915 agtgtactaaatattatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 5670858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 3797723 - 3797836
Alignment:
Q  147 ttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggt 246  Q
    |||||||||||||||||| ||||| ||||  ||||  |||||||  ||| ||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  3797723 ttgcataaaattaaataa-cagaaaataac-atagttttggaaaagata-gagagagatgagatcaggtctttcgaatcatctatgttcccctaattggt 3797819  T
Q  247 atactgcacatattctt 263  Q
    ||||||||| |||||||    
T  3797820 atactgcacctattctt 3797836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 18673035 - 18673111
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  18673035 aaagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 18673111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 27014617 - 27014543
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| |||||||||||| ||||||||  ||||||||||||||| ||||||| |||||||||||||||||||    
T  27014617 tgatagattttttagcaagtgcactaaataccatcgaagtagtaaaaatatcgttaccacgaggactgtgttaat 27014543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 34319776 - 34319943
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaag 191  Q
    ||||||||||||||||||||||||  ||||| |||| ||| ||||||||||| || ||||||||  ||||||| ||||| |||| |||||  |||||||     
T  34319776 gttaatatttaggatgtgtaaatttcttttagtgcccgagacagtagttttgatt-gcataaaaagtaaataa-cagaaaataa-gatagttttggaaaa 34319872  T
Q  192 aataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
     | ||| |||| |||| ||||||||||||||||||||| ||||| || ||||||||||||||||| |||||    
T  34319873 gacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccttaattggtatactgcacctattc 34319943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 15445328 - 15445393
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  15445328 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 15445393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 19827574 - 19827509
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  19827574 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtataatgcacatattctt 19827509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 29325086 - 29324921
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| |||||||||||||||  ||||| |||| ||||||||||||||| || ||||||| |||||||| ||||| |||| |||||  |||||||      
T  29325086 gttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-gcataaatttaaataa-cagaaaataa-gatagttttggaaaag 29324990  T
Q  193 ataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    | ||| |||| |||  ||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||    
T  29324989 acaaggagagagatcagatcaggtctttcgaatcatcgatgtt-ccctaattggtatattgcacctattc 29324921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 19864478 - 19864545
Alignment:
Q  196 agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||||| |||||||    
T  19864478 agagagagatgagatcaggtctttcgaatcatctatgatcccctaattggtatactgcacctattctt 19864545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 24151028 - 24150955
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| |||| |||||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  24151028 tgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatattgttcccacgaggactgtgttaat 24150955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 33927235 - 33927068
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaag 191  Q
    |||||||| |||||||||||||||  ||||| |||| |||||||||| || ||| |||||||||  ||||||| || || |||| |||||  |||||||     
T  33927235 gttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtaggtt-ggtgtgcataaaaagtaaataa-cataaaataa-gatagttttggaaaa 33927139  T
Q  192 aataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
     | ||| |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  33927138 gacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 33927068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 38283247 - 38283320
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| |||| |||||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  38283247 tgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatattgttcccacgaggactgtgttaat 38283320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 12783063 - 12782998
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  12783063 agagagatgagatcaggtctttcgaatcatctatgttcctctaattggtatactgcacctattctt 12782998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 19820886 - 19820821
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||||||||||||||||||||| |||| |||||||||||||||||||| |||||||    
T  19820886 agagagatgagatcaggtctttcgaatcatctttgttcccctaattggtatactgcacctattctt 19820821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 33408228 - 33408345
Alignment:
Q  147 ttgcataaaattaaataaacagaatataaagatagagttggaaagaataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattgg 245  Q
    ||||||||||||||||||||| || ||||||||||  |||||||  ||| | |||| |||| | | |||||||||||||| |||| ||| ||||||| ||    
T  33408228 ttgcataaaattaaataaacataaaataaagatagttttggaaaatatatggagagtgatgagtttaggtctttcgaatcctctaagttcccctaatcgg 33408327  T
Q  246 tatactgcacatattctt 263  Q
    |||||||||| |||||||    
T  33408328 tatactgcacctattctt 33408345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 38283452 - 38283517
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  38283452 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattctt 38283517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 40903046 - 40903111
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||||||||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  40903046 agagagatgagatcaggtctttagaatcatctatgttcccctaattggtatactgcacctattctt 40903111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 52006494 - 52006559
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| || |||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  52006494 agagagatgagaccaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 52006559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 40795151 - 40795096
Alignment:
Q  208 gatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  40795151 gatcaggtctttcgaatcatctatgtttccctaattggtatactacacctattctt 40795096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 44164931 - 44164876
Alignment:
Q  208 gatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  44164931 gatcaagtctttcgaatcatctatgttcccctaattggtatactacacatattctt 44164876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 44808814 - 44808981
Alignment:
Q  94 gttaatatttaggatgtgtaaa-ttattttaatgcctgaggcagtagttttggtttgcat-aaaattaaataaacagaatataaagatagagttgg-aaa 190  Q
    |||||||||||||||||||||| || ||||| |||| |||||||||||||| | |||||| |||| ||||| ||||||| || |||||||  |||| |||    
T  44808814 gttaatatttaggatgtgtaaatttcttttagtgcccgaggcagtagtttt-gattgcataaaaagtaaat-aacagaaaat-aagatagttttggaaaa 44808910  T
Q  191 gaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    ||  | ||||  |||| |||||| |||||||||||||| |||||  ||||||||||||| ||||| |||||    
T  44808911 gacaaggagaaagatgagatcagatctttcgaatcatcgatgttctcctaattggtatattgcacctattc 44808981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 15429819 - 15429884
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||    
T  15429819 agagagatgagatcaggtcttttgaatcatctatgttcccctaattggtatactacacctattctt 15429884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 15436433 - 15436498
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||    
T  15436433 agagagatgagatcaggtcttttgaatcatctatgttcccctaattggtatactacacctattctt 15436498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 15445120 - 15445165
Alignment:
Q  26 gatagatattttagcaagtgtactaaatattatcgaagtagtaaaa 71  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  15445120 gatagatattttagcaagtgtactaaatactatcgaagtagtaaaa 15445165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 37103195 - 37103244
Alignment:
Q  214 gtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  37103195 gtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 37103244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 12238474 - 12238359
Alignment:
Q  147 ttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggt 246  Q
    |||||||||||||||||| || || ||||||||||  |||||||  |||   ||| |||| ||  ||||||||||| ||||| ||||| |||||||||||    
T  12238474 ttgcataaaattaaataa-cataaaataaagatagttttggaaaatatatatgagagatgagactaggtctttcgagtcatcaatgttcccctaattggt 12238376  T
Q  247 atactgcacatattctt 263  Q
    ||||||||| |||||||    
T  12238375 atactgcacctattctt 12238359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 15405043 - 15405106
Alignment:
Q  197 gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    ||||| |||| ||||||||||||||||||||||| ||| ||||||||| |||||||||| ||||    
T  15405043 gagagagatgagatcaggtctttcgaatcatctaagttcccctaattgatatactgcacctatt 15405106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 18911643 - 18911592
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  18911643 aggtcttttgaatcatctatgttcccctaattggtatactgcacctattctt 18911592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 21419956 - 21419881
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | ||||||||||||||||| ||||| |||||||||||||||  ||| ||||||||    
T  21419956 aagaataagagagagatgagtttaggtctttcgaatcatcgatgttcccctaattggtataccacacctattcttg 21419881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 25962226 - 25962151
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | ||||||||||||||||| |||||  |||||||||||||| |||| ||||||||    
T  25962226 aagaataagagagagatgagtttaggtctttcgaatcatcgatgttctcctaattggtataccgcacctattcttg 25962151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 46955432 - 46955503
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||||||| |||| |||| ||| |||||||| |||||||| ||||| |||||||||||||||||||| ||||    
T  46955432 aagaataaaagagagatgagattaggtcttttgaatcatcgatgttcccctaattggtatactgcacctatt 46955503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 53009512 - 53009587
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | |||||||| ||||| |||||||| |||||||| ||||||||||| ||||||||    
T  53009512 aagaataagagagagatgagtttaggtcttttgaatcgtctatgttcccctaattagtatactgcacctattcttg 53009587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 260
Target Start/End: Complemental strand, 56199001 - 56198950
Alignment:
Q  209 atcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| ||||    
T  56199001 atcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 56198950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 252
Target Start/End: Complemental strand, 5681640 - 5681532
Alignment:
Q  142 ttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaa 241  Q
    |||| |||||||||||||||||| || || ||||||||||  |||||||  ||||| ||| |||| ||  ||||||||||||||||| ||||| || |||    
T  5681640 ttggattgcataaaattaaataa-cataaaataaagatagttttggaaaagataag-gagagatgagactaggtctttcgaatcatcgatgttcccttaa 5681543  T
Q  242 ttggtatactg 252  Q
    |||||||||||    
T  5681542 ttggtatactg 5681532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 99
Target Start/End: Complemental strand, 5706717 - 5706675
Alignment:
Q  57 atcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  5706717 atcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 5706675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 35510159 - 35510085
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||||||| |||| | | |||||||||||||||||||| || |||||||||||||||| ||| |||||||    
T  35510159 aagattaagagagagatgagtttaggtctttcgaatcatctatattcccctaattggtatactacacctattctt 35510085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 22172233 - 22172318
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagat 179  Q
    |||||||| ||||||||||||||||||||| |||| |||||||||  ||| || ||||||||  |||||| || ||| ||||||||    
T  22172233 gttaatatgtaggatgtgtaaattattttagtgcccgaggcagtatgttttgtgtgcataaatgtaaatagacggaaaataaagat 22172318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 49270822 - 49270773
Alignment:
Q  214 gtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  49270822 gtctttcgaatcatctatattctcctaattggtatactgcacatattctt 49270773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 15812098 - 15812162
Alignment:
Q  197 gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    ||||| |||| |||||||||||||||  |||| ||||| |||||||||||||||||||| |||||    
T  15812098 gagagagatgagatcaggtctttcgatacatcgatgttcccctaattggtatactgcacctattc 15812162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 25962407 - 25962351
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgagga 89  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||||||||| ||||    
T  25962407 attttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaagga 25962351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 260
Target Start/End: Complemental strand, 30392736 - 30392665
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    ||||||||||||| |||| | | ||||||||| |||||| |||||| |||||||||||||| ||||| ||||    
T  30392736 aagaataagagagagatgagtttaggtctttccaatcatatatgttcccctaattggtatattgcacctatt 30392665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 40493321 - 40493396
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||  ||| | | ||||||||||||||||| ||||| |||||||||||||||  ||| ||||||||    
T  40493321 aagaataagagagatatgagtttaggtctttcgaatcatcgatgttcccctaattggtataccacacctattcttg 40493396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 12786480 - 12786403
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatat-tatcgaagtagtaaaagta--tcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||| || |||||||||| |||||  |  ||||  |||||||||||||||||||    
T  12786480 tgatagatattttagcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaat 12786403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 18672847 - 18672903
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    |||||||| ||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  18672847 ctgataga-attttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcc 18672903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 24044104 - 24044169
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||  ||| ||||||||| |||||||||||||||| ||| |||||||    
T  24044104 agagagatgagatcaggtctttgaaattatctatgttcccctaattggtatactacacctattctt 24044169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 27677018 - 27677083
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||| |||||| ||||||||| |||||| | |||||||||||||||||| |||||||    
T  27677018 agagagatgagataaggtctatcgaatcatttatgttcctctaattggtatactgcacctattctt 27677083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 30392914 - 30392861
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||| ||||| ||||| |||||||||||||||| |||||||||||| |||||||    
T  30392914 gcaattgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 30392861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 8871722 - 8871782
Alignment:
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactg 252  Q
    |||| ||||| |||| ||||||||||||| ||||||||| ||| || ||||||||||||||    
T  8871722 aatatgagagagatgagatcaggtctttcaaatcatctaagttcccttaattggtatactg 8871782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 260
Target Start/End: Original strand, 8877457 - 8877525
Alignment:
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||| ||||| |||| ||||||||||||| ||||||||| ||| ||||| || ||||||||||| ||||    
T  8877457 aatatgagagagatgagatcaggtctttcaaatcatctaagttcccctatttagtatactgcacctatt 8877525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 11196014 - 11195962
Alignment:
Q  40 caagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||  |||||||    
T  11196014 caagtgtaccaaatactatcgaagtagtaaaaatatcgttcccataaggactg 11195962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 48415488 - 48415557
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctat----gttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||| ||||||    ||| |||||||||||||||||||| |||||||    
T  48415488 agagagatgagatcaggtctttcgaattatctatatatgttcccctaattggtatactgcacctattctt 48415557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 53009336 - 53009388
Alignment:
Q  40 caagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    ||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||    
T  53009336 caagtgtaccaaatactatcgaattagtaaaaatatcgttcccacaaggactg 53009388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 3719260 - 3719217
Alignment:
Q  220 cgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||| ||||| |||||||||||||||||||| |||||||    
T  3719260 cgaatcatccatgtttccctaattggtatactgcacctattctt 3719217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 29544828 - 29544899
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||||||||||||  ||| | | ||||||||||||||||| ||||| | |||||||||||| ||||| ||||    
T  29544828 aagaataagagagatatgagtttaggtctttcgaatcatcgatgttcctctaattggtatattgcacctatt 29544899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 44165147 - 44165100
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatat-tatcgaagtagtaaaa 71  Q
    |||||||||||||||||||||||||||| || |||||||||| |||||    
T  44165147 tgatagatattttagcaagtgtactaaaaatgtatcgaagtaataaaa 44165100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 46955244 - 46955309
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||| |||| |||||||||| ||| | |||||||||||||||| |||||||||||| |||||||    
T  46955244 tgatagat-ttttggcaagtgtaccaaa-agtatcgaagtagtaaaaatatcgttcccacaaggactg 46955309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 15429610 - 15429656
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaa 71  Q
    ||||||| ||||||||||| ||| |||||| ||||||||||||||||    
T  15429610 tgatagacattttagcaagcgtattaaatactatcgaagtagtaaaa 15429656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 15436224 - 15436270
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaa 71  Q
    ||||||| ||||||||||| ||| |||||| ||||||||||||||||    
T  15436224 tgatagacattttagcaagcgtattaaatactatcgaagtagtaaaa 15436270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 17670662 - 17670617
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaa 71  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||    
T  17670662 tgatagatattttagcaagtgtactaaa-actatcgaagtaataaaa 17670617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 21420145 - 21420081
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgagga 89  Q
    |||||||| ||||| |||||||||  ||||| |||||||||||||||| ||||||| |||| ||||    
T  21420145 ctgataga-attttggcaagtgtatcaaatactatcgaagtagtaaaaatatcgtttccacaagga 21420081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 40493140 - 40493188
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    ||||| |||||||||| ||||| ||| |||||||||||| |||||||||    
T  40493140 attttggcaagtgtaccaaatactattgaagtagtaaaaatatcgttcc 40493188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 146; Significance: 6e-77; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 9185284 - 9185453
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  9185284 gttaatatttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagttttggaaagaa 9185383  T
Q  194 taagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9185384 taagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 9185453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 9188512 - 9188681
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||    
T  9188512 gttaatatttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgcataaaattaaataaacagaatgtaaagatagttttggaaagaa 9188611  T
Q  194 taagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  9188612 taagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 9188681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 29440740 - 29440571
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  29440740 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagttttggaaagaa 29440641  T
Q  194 taagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
     ||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  29440640 aaagagagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactgcacctattctt 29440571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 37279536 - 37279705
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  37279536 gttaatatttaggatgtgtaaattattttagtgcctgaggcagtatttttggtttgcataaaattaaataaacagaatataaagatagttttggaaagaa 37279635  T
Q  194 taagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  37279636 taagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 37279705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 263
Target Start/End: Original strand, 25959457 - 25959717
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat----atttag--------------- 105  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||    ||||||                   
T  25959457 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgatgactgtgttaatctcaatttagcaataaggttaacat 25959556  T
Q  106 ----gatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgg-aaagaataagaga 200  Q
        |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||    
T  25959557 ttaggatgtgtaaattattttagtgcttgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagttttggaaaagaataagaga 25959656  T
Q  201 gggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
      |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  25959657 --gatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 25959717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 8888881 - 8888712
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    ||||||||||||||||||||||||  ||   ||||  |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  8888881 gttaatatttaggatgtgtaaatttcttagttgccctaggcagtagttttggtttgcataaaattaaatcaacataatataaagatagagttggaaagaa 8888782  T
Q  194 taagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||| ||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  8888781 taagagagagatgagattaggtctttcaaatcatctatgttcccctaattggtatactgcacctattctt 8888712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 94 - 264
Target Start/End: Complemental strand, 25871029 - 25870859
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgg-aaaga 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||   |||| |||||    
T  25871029 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaac-gaaaataaagataattttggaaaaga 25870931  T
Q  193 ataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
      ||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||| || ||| ||||||||    
T  25870930 taaagagagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatgctacacctattcttg 25870859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 25874426 - 25874257
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgg-aaaga 192  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||   |||| |||||    
T  25874426 gttaatatttaggatgtgtaaattattttaatgtctgaggcagtagttttggtttgcataaaattaaataaac-gaaaataaagataattttggtaaaga 25874328  T
Q  193 ataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
      ||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||    
T  25874327 taaagagagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactacacctattctt 25874257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 97 - 263
Target Start/End: Original strand, 30274631 - 30274797
Alignment:
Q  97 aatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgg-aaagaat 194  Q
    ||||| |||||||| ||||||  ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||    
T  30274631 aatatataggatgtataaatttcttttagtgactgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagttttggaaaagaat 30274730  T
Q  195 aagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||  |||| || || |||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  30274731 aagaga--gatgagagcatgtctttcgaatcatctatgttctcctaattggtatactgcacctattctt 30274797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 24235345 - 24235172
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgc-----ataaaattaaataaacagaatataaagatagagttgga 188  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||      |||||| ||||||| ||||| |||||||| || ||| |    
T  24235345 gttaatacttaggatgtgtaaattattttagtgcccgaggcagtagttttggtttgattgcaataaaagtaaataa-cagaaaataaagatcgaattgaa 24235247  T
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||  |||| ||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  24235246 aagaataagagaaagatgagatcaggtctttcgaattatctatgttcccctaattggtatactgcacctattctt 24235172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 34 - 263
Target Start/End: Complemental strand, 24238700 - 24238444
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat----atttag-------------------gatgt 110  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    ||||||                   |||||    
T  24238700 ttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatacttaggatgt 24238601  T
Q  111 gtaaattattttaatgcctgaggcagtagttttggtttg-----cataaaattaaataaacagaatataaagatagagttggaaagaataagagagggat 205  Q
    ||||||||||||| |||| ||| ||||||||||||||||      |||||| ||||| ||||||| |||||||| || |||||||||||||||||  |||    
T  24238600 gtaaattattttagtgcccgagacagtagttttggtttgattgcaataaaagtaaat-aacagaaaataaagatcgaattggaaagaataagagaaagat 24238502  T
Q  206 gcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    | ||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  24238501 gagatcaggtctttcgaattatctatgttcccctaattggtatactgcacctattctt 24238444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 180
Target Start/End: Original strand, 45499218 - 45499303
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagata 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  45499218 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaac-gaaaataaagata 45499303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 11347793 - 11347924
Alignment:
Q  131 aggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatct 229  Q
    |||||||||||||||||||| |||||  ||||||| ||||| |||| |||||||||||||||||| |||||  |||| ||||||||||||||||||||||    
T  11347793 aggcagtagttttggtttgcttaaaaagtaaataa-cagaaaataa-gatagagttggaaagaatgagagatagatgagatcaggtctttcgaatcatct 11347890  T
Q  230 atgttgccctaattggtatactgcacatattctt 263  Q
    ||||| |||||||||||||||||||  |||||||    
T  11347891 atgttcccctaattggtatactgcatctattctt 11347924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 8888975 - 8888899
Alignment:
Q  23 cctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  8888975 cctgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 8888899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 11347662 - 11347736
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  11347662 tgatagatattttagcaagtgtactaaatactatcaaagtagtaaaaatatcgttcccacgaggactgtgttaat 11347736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 30274536 - 30274610
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  30274536 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccatgaggactgtgttaat 30274610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 254
Target Start/End: Complemental strand, 33311003 - 33310752
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat----atttag--------------- 105  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    ||||||                   
T  33311003 tgatagatattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaatctcaatttagcaataacgttaatat 33310904  T
Q  106 ----gatgtgtaaa-ttattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgg-aaagaataagag 199  Q
        |||||||||| || ||||| |||| |||||||||||||| | ||||||||| |||||| ||||||| || |||||||  |||| |||||  | |||    
T  33310903 ctaggatgtgtaaatttcttttagtgcccgaggcagtagtttt-gattgcataaatttaaat-aacagaaaat-aagatagttttggaaaagacaaggag 33310807  T
Q  200 agggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgca 254  Q
    || |||| ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  33310806 agagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgca 33310752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 25871121 - 25871047
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||    
T  25871121 tgatagataatttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcctacgaggactgtgttaat 25871047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 40677620 - 40677682
Alignment:
Q  95 ttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaat 157  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40677620 ttaatatttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgcataaaat 40677682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 45499135 - 45499200
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  45499135 ttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 45499200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 25874516 - 25874444
Alignment:
Q  27 atagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  25874516 atagataatttagcaagtgtactaaatactatcgaagtagtaaaaatattgttcccacgaggactgtgttaat 25874444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 31427401 - 31427568
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaag 191  Q
    ||||||||||||||||||||||||  ||||| |||| |||||||| |||||| || ||||||||  ||||||| ||||| |||| |||||  |||||||     
T  31427401 gttaatatttaggatgtgtaaatttcttttagtgcccgaggcagtggttttgatt-gcataaaaagtaaataa-cagaaaataa-gatagttttggaaaa 31427497  T
Q  192 aataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
     | ||| |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  31427498 gacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 31427568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 36808303 - 36808471
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    |||||||| ||||||||||||||| | | | ||  ||||||||||| |||| | ||||||||||||||||||||||| ||||| ||||  |||||||  |    
T  36808303 gttaatatctaggatgtgtaaattttataagtgattgaggcagtaggtttg-tgtgcataaaattaaataaacagaaaataaa-atagttttggaaaaga 36808400  T
Q  194 taag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||| ||||||||||||| |||| | || ||| |||||||||||| ||||||| |||||||    
T  36808401 taaggagagagatgagatcaggtctttcaaatcctttaagttcccctaattggtacactgcacctattctt 36808471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 1386376 - 1386452
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  1386376 aaagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacttattcttg 1386452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 12219946 - 12219871
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  12219946 aagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 12219871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 29440821 - 29440758
Alignment:
Q  36 ttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||    
T  29440821 ttagcaagtgtactaaatactatcgaagtagtaaaaatatcgtttccacgaggactgtgttaat 29440758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 10601190 - 10601116
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||| ||||||| |||||||||| ||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  10601190 tgataaatattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcacacgaggactgtgttaat 10601116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 263
Target Start/End: Complemental strand, 22021251 - 22021144
Alignment:
Q  159 aaataaacagaatataaagatagagttggaaagaata---agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcac 255  Q
    |||||||||||| ||||||||||  |||| ||  |||   |||||| |||| ||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  22021251 aaataaacagaaaataaagatagttttggtaaagataaggagagagagatgagataaggtctttcgaatcatctatgttaccctaattggtatactgcac 22021152  T
Q  256 atattctt 263  Q
     |||||||    
T  22021151 ctattctt 22021144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 24235428 - 24235363
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||| || |||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  24235428 ttttagcaagtttattaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 24235363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 38015763 - 38015597
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| |||||||||||||||  ||||| |||| ||||||||||||||| || ||||||| |||||||| ||||| || | |||||  |||||||      
T  38015763 gttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-gcataaatttaaataa-cagaaaatga-gatagttttggaaaag 38015667  T
Q  193 ataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    | ||| |||| |||| ||||||||||||||||||||| ||||| ||||||||| ||||||| || |||||    
T  38015666 acaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattgatatactgaacctattc 38015597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 40781613 - 40781548
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  40781613 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 40781548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 188 - 260
Target Start/End: Original strand, 16790711 - 16790783
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  16790711 aaagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 16790783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 25138845 - 25138960
Alignment:
Q  147 ttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggt 246  Q
    |||||||||||||||||| || || ||||||||    |||||||  ||||||||| |||| ||||||||||||||||| ||| || || |||||||||||    
T  25138845 ttgcataaaattaaataa-cataaaataaagatttgtttggaaaatataagagagagatgagatcaggtctttcgaattatcgatatttccctaattggt 25138943  T
Q  247 atactgcacatattctt 263  Q
    ||||||||| |||||||    
T  25138944 atactgcacctattctt 25138960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 9966323 - 9966398
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||||||| |||| ||||| |||||| |||||||||||||| |||||||||||||| ||||| |||||||    
T  9966323 aaagaataagagagagatgagatcaagtcttttgaatcatctatgttcccctaattggtatattgcacctattctt 9966398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 27266940 - 27266865
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||||||| ||||  |||||||    
T  27266940 aaagaataagagagagatgagatcaggtctttcaaatcatctatgttcccctaattggtataatgcagctattctt 27266865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 40259094 - 40259169
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | ||||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  40259094 aagaataagagagagatgagtttaggtcgttcgaatcatctatgttcccctaattggtatactgcacctattcttg 40259169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 3875437 - 3875363
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||  |||| | | ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3875437 aagaataagagaaagatgagtttaggtctttcgaatcacctatgttcccctaattggtatactgcacatattctt 3875363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 13971869 - 13971923
Alignment:
Q  209 atcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  13971869 atcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 13971923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 38015855 - 38015781
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||| ||||| | |||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  38015855 tgatagaaattttggaaagtgtaccaaatactatcgaagtagtaaaaatattgttcccacgaggactgtgttaat 38015781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 45457407 - 45457240
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaag 191  Q
    |||||||| |||||||||||||||  ||||| |||||||| |||||| || ||| |||||||||  ||||||| ||||| |||| |||||  |||||||     
T  45457407 gttaatatctaggatgtgtaaatttgttttagtgcctgagacagtaggtt-ggtgtgcataaaaagtaaataa-cagaaaataa-gatagttttggaaaa 45457311  T
Q  192 aataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
     | ||| |||| |||| ||||||||||||||||||||||| ||| ||||||||| |||||||||| |||||    
T  45457310 gacaaggagagagatgagatcaggtctttcgaatcatctaagttcccctaattgttatactgcacctattc 45457240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 5666658 - 5666594
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  5666658 agagagatgagatcaggtctttcgaat-atctatgttcccctaattggtatactgcacatattctt 5666594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 9185201 - 9185266
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||| |||||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  9185201 ttttggcaagtgtaccaaatactatcgaagtagtaaaaatattgttcccacgaggactgtgttaat 9185266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 9188429 - 9188494
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||| |||||||||| ||||| |||||||||||||||| ||||||||||||||| |||||||||||    
T  9188429 ttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgagtactgtgttaat 9188494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 13137082 - 13137017
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  13137082 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactacacctattctt 13137017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 31585904 - 31585969
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  31585904 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattctt 31585969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 43207854 - 43207919
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  43207854 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattctt 43207919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 43723841 - 43723776
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  43723841 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattctt 43723776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 37937174 - 37937249
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | ||||||||||||||||| ||||| ||||||||||||||| |||| ||||||||    
T  37937174 aagaataagagagagatgagtttaggtctttcgaatcatcgatgttcccctaattggtataccgcacctattcttg 37937249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 42368466 - 42368541
Alignment:
Q  25 tgatagatatttt-agcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||||| |  |||||||||||    
T  42368466 tgatagatatttttagcaagtgtactaaatactatcgaagtaataaaaatatcgttcccacaaaaactgtgttaat 42368541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 45493118 - 45493185
Alignment:
Q  196 agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||| |||| |||||||| |||||| ||||||||||| |||||||||||||||||||| |||||||    
T  45493118 agagagagatgagatcaggtttttcgagtcatctatgtttccctaattggtatactgcacctattctt 45493185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 45500860 - 45500927
Alignment:
Q  196 agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||| |||| |||||||| |||||| ||||||||||| |||||||||||||||||||| |||||||    
T  45500860 agagagagatgagatcaggtttttcgagtcatctatgtttccctaattggtatactgcacctattctt 45500927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 22630991 - 22630917
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||| |||| | | |||||||||||||||| |||||| || ||||||||||||||||| |||||||    
T  22630991 aagaataagagagagatgagtttaggtctttcgaatcatttatgttcccttaattggtatactgcacctattctt 22630917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 37279445 - 37279518
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| |||| |||||||||| ||  | |||||||||||||||| |||||||||||||||||||||||||||    
T  37279445 tgatagat-ttttggcaagtgtaccaataactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 37279518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 6826907 - 6826850
Alignment:
Q  203 gatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||| ||||||||||||||||||||||||| | |||||||||||||||||||| ||||    
T  6826907 gatgagatcaggtctttcgaatcatctatgctcccctaattggtatactgcacctatt 6826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 15470599 - 15470546
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatact 251  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  15470599 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatact 15470546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 23205497 - 23205445
Alignment:
Q  40 caagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  23205497 caagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactg 23205445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 23677101 - 23677049
Alignment:
Q  40 caagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  23677101 caagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactg 23677049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 40677541 - 40677601
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||| ||  | |||||||||||||||| |||||||||||||||||||||||||||    
T  40677541 gcaagtgtaccaataactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 40677601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 261
Target Start/End: Complemental strand, 5105868 - 5105805
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    |||| |||| ||||||||||||| ||| ||||||||| |||||||||||||||||||| |||||    
T  5105868 agagagatgagatcaggtctttcaaattatctatgttcccctaattggtatactgcacctattc 5105805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 16179254 - 16179203
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  16179254 aggtctttcgaatcatcgatgttcccctaattggtatactgcatatattctt 16179203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 263
Target Start/End: Original strand, 25820706 - 25820875
Alignment:
Q  97 aatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgc-----ataaaattaaataaacagaatataaagatagagttggaaag 191  Q
    |||||||||||||| |||| |||||| ||||| |||||||| | |||| ||||      |||||| ||||||| ||||| |||||||||   |||||||     
T  25820706 aatatttaggatgtataaaatatttttatgcccgaggcagttgatttgatttgattgcaataaaagtaaataa-cagaaaataaagatatgtttggaaaa 25820804  T
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
     ||| | ||| |||| ||  ||||||||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  25820805 tatatg-gagagatgagactaggtctttcgaatcatcgatgttcccctaattgatatactgcacctattctt 25820875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 40258905 - 40258971
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||| |||| |||||||||| ||||| |||||||||||||||| |||||||||||| |||||||    
T  40258905 tgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 40258971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 42368685 - 42368740
Alignment:
Q  208 gatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||||| |||||||    
T  42368685 gatcaggtctttcaaatcatttatgttcccctaattggtatactgcacctattctt 42368740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 45454119 - 45453952
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaag 191  Q
    |||||||| |||||||||||||||  ||||| ||||||||||||||| || ||| |||||||||  ||||||| ||||| |||| |||||  ||| |||     
T  45454119 gttaatatctaggatgtgtaaatttgttttagtgcctgaggcagtaggtt-ggtgtgcataaaaagtaaataa-cagaaaataa-gatagttttgaaaaa 45454023  T
Q  192 aataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
     | ||| |||| |||| |||||||||||||||||||| || ||| | |||||||||||| ||||| |||||    
T  45454022 gacaaggagagagatgagatcaggtctttcgaatcatataagtttctctaattggtataatgcacctattc 45453952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 16179471 - 16179418
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||| |||||||    
T  16179471 gcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 16179418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 34682944 - 34682872
Alignment:
Q  92 gtgttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataa 164  Q
    |||||||||| |||||||  |||||||||||| || |||||||||||| |||| | ||||||||| |||||||    
T  34682944 gtgttaatatctaggatgaataaattattttagtgtctgaggcagtaggtttgttgtgcataaaagtaaataa 34682872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 1386198 - 1386256
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||||||||| |||||||    
T  1386198 attttggcaagtgtaccaaatactatcgaagtagtaaaa-tatcgttcccacaaggactg 1386256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 22631170 - 22631119
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggac 90  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||| |||||    
T  22631170 gcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggac 22631119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 40781822 - 40781745
Alignment:
Q  25 tgatagatatttt-agcaagtgtactaaatat-tatcgaagtagtaaaag-tatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||| ||||||||||||||| |  |||||||||| |||||  |||||||||||| ||||||||||||||    
T  40781822 tgatagatatttttagcaagtgtactaaaaacgtatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 40781745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 12220123 - 12220071
Alignment:
Q  40 caagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    ||||||||| ||||| |||||||||||||||| | |||||||||| |||||||    
T  12220123 caagtgtaccaaatactatcgaagtagtaaaaatttcgttcccacaaggactg 12220071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 3875615 - 3875564
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggac 90  Q
    |||||||||  ||||| |||||||||||||||| |||||||||||| |||||    
T  3875615 gcaagtgtatcaaatactatcgaagtagtaaaaatatcgttcccacaaggac 3875564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 25138692 - 25138739
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatat-tatcgaagtagtaaaa 71  Q
    |||||||||||||||||||||||||||| || |||||||||| |||||    
T  25138692 tgatagatattttagcaagtgtactaaaaatatatcgaagtaataaaa 25138739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 37936993 - 37937044
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccac 84  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||| |||||||    
T  37936993 attttggcaagtgtaccaaatactatcgaagtagtaaaaatatcattcccac 37937044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 17877256 - 17877182
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||| | |||| | | ||||||||||||||||| ||| | ||||||||| |||| ||||| |||||||    
T  17877256 aagaataagagggagatgagtttaggtctttcgaatcatcgatgctcccctaattgatatattgcacctattctt 17877182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 43207650 - 43207712
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaata-ttatcgaagtagt-aaaagtatcgttcccac 84  Q
    ||||||||||||||||||||||||||||| |  |||||||||| | |||| ||||||||||||    
T  43207650 ctgatagatattttagcaagtgtactaaaaacgtatcgaagtaataaaaaatatcgttcccac 43207712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 3252658 - 3252595
Alignment:
Q  35 tttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||| | |||||||||| ||||| | | ||| ||||||| |||||||||||    
T  3252658 tttagcaagtgtactaaaaactatcgaagtaataaaaat-ttgtttccacgagaactgtgttaat 3252595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 122
Target Start/End: Complemental strand, 15470713 - 15470685
Alignment:
Q  94 gttaatatttaggatgtgtaaattatttt 122  Q
    |||||||||||||||||||||||||||||    
T  15470713 gttaatatttaggatgtgtaaattatttt 15470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 16790524 - 16790575
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcg 77  Q
    |||||||| |||| |||||||||| ||||| |||||||||||||||| |||||    
T  16790524 tgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcg 16790575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 263
Target Start/End: Complemental strand, 26366121 - 26366010
Alignment:
Q  151 ataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatac 250  Q
    |||||| ||||||| ||||| ||||||||||  |||||||  |||   ||| |||| ||  |||||||| |||| ||||||||| ||||||||||||||     
T  26366121 ataaaagtaaataa-cagaaaataaagatagttttggaaaatatatatgagagatgagactaggtcttttgaattatctatgttcccctaattggtatag 26366023  T
Q  251 tgcacatattctt 263  Q
    || || |||||||    
T  26366022 tgtacctattctt 26366010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 45457502 - 45457425
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatat-tatcgaagtagtaaaagta---tcgttcccacgaggactgtgttaat 99  Q
    |||||||| ||||||||||||||||||||||  ||||||||| ||||| ||   ||||  |||||||||||||||||||    
T  45457502 tgatagat-ttttagcaagtgtactaaatatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaat 45457425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 115)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 22 - 263
Target Start/End: Complemental strand, 2874008 - 2873743
Alignment:
Q  22 acctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat----atttag------------ 105  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    ||||||                
T  2874008 acctgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaatcttaatttagcaataatgttaa 2873909  T
Q  106 -------gatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaata--a 196  Q
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |    
T  2873908 tatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaat-aacagaatataaagatagagttggaaagaataaga 2873810  T
Q  197 gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  2873809 gagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 2873743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 30691084 - 30690915
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  30691084 gttaatatttaggatgtgtaaattattttaatgcctgagacagtagttttggtttgcataaaattaaataaacagaatataaagatagttttggaaagaa 30690985  T
Q  194 taagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  30690984 taagagagagataagatcaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 30690915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 24 - 263
Target Start/End: Complemental strand, 54724183 - 54723921
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat----atttag-------------- 105  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    ||||||                  
T  54724183 ctgagagatattttagcaagtgtactaaatattatcgaagtagtaaaaatatcgttcccacgaggaccgtgttaatttcaatttagcaataaagttaata 54724084  T
Q  106 -----gatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagaga 200  Q
         |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  54724083 tttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagttttggaaagaataagaga 54723984  T
Q  201 gggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    | |||| ||||||||||| ||||||||||||||| || ||||||||||||||||| |||||||    
T  54723983 gagatgagatcaggtcttccgaatcatctatgttcccataattggtatactgcacctattctt 54723921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 11190875 - 11190706
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  11190875 gttaatacttaggatgtgtaaattattttaatgcccgaggcagttgttttggtttgcataaaattaaataaacagaatataaagatagttttggaaagaa 11190776  T
Q  194 taagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  11190775 taagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattctt 11190706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 25 - 263
Target Start/End: Complemental strand, 539267 - 539006
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat----atttag--------------- 105  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||    ||||||                   
T  539267 tgatagatattttagcaagtatactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatat 539168  T
Q  106 ----gatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagag 201  Q
        ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  539167 ttaggatgtgtaaattattttaatgcccgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagttttggaaagtataagagag 539068  T
Q  202 ggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
     |||| ||| |||||||||||||||| |||||| |||||||||||||||| ||| |||||||    
T  539067 agatgagattaggtctttcgaatcatatatgtttccctaattggtatactacacctattctt 539006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 6922869 - 6922699
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaat-gcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||||||||||||||||||||||||  | || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6922869 gttaatatttaggatgtgtaaattattttgtttgcgtgaggtagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgaaaaga 6922770  T
Q  193 ataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  6922769 ataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 6922699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 53816178 - 53816007
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaag 191  Q
    ||||||||||||||||||||||||  ||| |  |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  53816178 gttaatatttaggatgtgtaaatttcttttagttgcccgaggcagtagttttggtttgcataaaattaaataaacagaaaataaagatagagttggaaag 53816079  T
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  53816078 aataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 53816007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 97 - 260
Target Start/End: Complemental strand, 28266264 - 28266099
Alignment:
Q  97 aatatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaat 194  Q
    |||||||||||||||||||||  ||| |  ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28266264 aatatttaggatgtgtaaatttcttttagttgccctaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaat 28266165  T
Q  195 aagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  28266164 aagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 28266099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 7486920 - 7486750
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaat-gcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaag 191  Q
    ||||||||||||||||||||||||  ||||||| |||  ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  7486920 gttaatatttaggatgtgtaaatttcttttaattgccctaggcagtagttttgggttgcataaaattaaataa-cagaatataaagatagagttggaaag 7486822  T
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  7486821 aataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 7486750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 94 - 260
Target Start/End: Original strand, 6434622 - 6434790
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaag 191  Q
    ||||||||||| ||||||||||||  ||| |  ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6434622 gttaatatttatgatgtgtaaatttcttttagttgccctaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagtttgaaag 6434721  T
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  6434722 aataagagagagatgagattaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 6434790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 97 - 263
Target Start/End: Complemental strand, 24125845 - 24125678
Alignment:
Q  97 aatatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaat 194  Q
    |||||||||||||| ||||||  ||| |  ||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24125845 aatatttaggatgtataaatttcttttagttgccctaggcagtagttttggtttgcataaaattaaataa-cagaatataaagatagagttggaaagaat 24125747  T
Q  195 aagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  24125746 aagagagagatgagatcaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 24125678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 97 - 263
Target Start/End: Complemental strand, 24129122 - 24128955
Alignment:
Q  97 aatatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaat 194  Q
    |||||||||||||| ||||||  ||| |  ||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24129122 aatatttaggatgtataaatttcttttagttgccctaggcagtagttttggtttgcataaaattaaataa-cagaatataaagatagagttggaaagaat 24129024  T
Q  195 aagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  24129023 aagagagagatgagatcaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 24128955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 97 - 263
Target Start/End: Original strand, 23298462 - 23298630
Alignment:
Q  97 aatatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaat 194  Q
    |||||||||||||||||||||  ||| |  ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23298462 aatatttaggatgtgtaaatttcttttagttgccctaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaat 23298561  T
Q  195 aagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||| |||| ||| ||||||||||||||||||| ||| || |||||||||| |||||| |||||||    
T  23298562 aagagagagatgagattaggtctttcgaatcatctaagttcccttaattggtatgctgcacctattctt 23298630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 32287163 - 32287338
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgg-aaaga 192  Q
    |||||||| ||||||||||||||||||||| |||| |||||| ||||||| | |||||||||||||||||||||||| ||||||||||  |||| |||||    
T  32287163 gttaatatctaggatgtgtaaattattttagtgcccgaggcaatagtttt-gattgcataaaattaaataaacagaaaataaagatagttttggaaaaga 32287261  T
Q  193 ata------agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
     ||      |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  32287262 ttaggagagagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 32287338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 18641616 - 18641787
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| || ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||      
T  18641616 gttaatatctaagatgtgtaaatttcttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaaaataaagatagttttggaaaat 18641715  T
Q  193 ata-agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||| |  ||| |||| ||  ||||||||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  18641716 atatatggagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 18641787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 18644612 - 18644783
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| || ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||      
T  18644612 gttaatatctaagatgtgtaaatttcttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaaaataaagatagttttggaaaat 18644711  T
Q  193 ata-agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||| |  ||| |||| ||  ||||||||||| ||||| ||||| |||||||||||||||||||| |||||||    
T  18644712 atatatggagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 18644783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 12541145 - 12541219
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacag 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12541145 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacag 12541219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 8461387 - 8461503
Alignment:
Q  147 ttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggt 246  Q
    |||||||||||||||||||||||| ||||||||||  |||||||  |||| |||| |||| ||| ||||||||||||||||||||||| |||||||||||    
T  8461387 ttgcataaaattaaataaacagaaaataaagatagttttggaaaagataa-agagagatgagattaggtctttcgaatcatctatgtttccctaattggt 8461485  T
Q  247 atactgcacatattcttg 264  Q
    ||||||||| ||||||||    
T  8461486 atactgcacctattcttg 8461503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 35412946 - 35412872
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  35412946 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 35412872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 255
Target Start/End: Complemental strand, 43809930 - 43809767
Alignment:
Q  97 aatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgc-----ataaaattaaataaacagaatataaagatagagttggaaa- 190  Q
    |||||||||||||| |||| |||||| ||||| |||||||||| |||| ||||      |||||| ||||||| || || ||||||||||  |||||||     
T  43809930 aatatttaggatgtataaaatattttgatgcccgaggcagtagatttgatttgattgcaataaaagtaaataa-cataaaataaagatagttttggaaaa 43809832  T
Q  191 gaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcac 255  Q
    ||||| ||||| |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  43809831 gaataggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcac 43809767  T

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Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 3306120 - 3306057
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaat 157  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3306120 gttaatatctaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaat 3306057  T

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Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 263
Target Start/End: Original strand, 16184445 - 16184702
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat----atttag-------------------gatgt 110  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||    ||||||                   |||||    
T  16184445 ttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgtttccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgt 16184544  T
Q  111 gtaaattattttaatgcctgaggcagtagttttggtttg-----cataaaattaaataaacagaatataaagatagagttgg-aaagaataagagaggga 204  Q
     |||| |||||| |||||||||||||| | |||| ||||      |||||| |||||||| | || ||||||||||  |||| |||||||| ||||| ||    
T  16184545 ataaaatattttgatgcctgaggcagttgatttgatttgattgcaataaaagtaaataaa-aaaaaataaagatagttttggaaaagaataggagagaga 16184643  T
Q  205 tgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    || ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  16184644 tgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattctt 16184702  T

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Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 23298366 - 23298441
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatat-tatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||    
T  23298366 tgatagatattttagcaagtgtactaaaaatgtatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 23298441  T

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Target: chr3; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 28327714 - 28327652
Alignment:
Q  95 ttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaat 157  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28327714 ttaatatttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgcataaaat 28327652  T

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Target: chr3; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 28331039 - 28330977
Alignment:
Q  95 ttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaat 157  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28331039 ttaatatttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgcataaaat 28330977  T

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Target: chr3; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 50461303 - 50461377
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  50461303 tgatagatattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 50461377  T

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Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 10106362 - 10106427
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  10106362 ttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 10106427  T

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Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 24125931 - 24125866
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  24125931 ttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 24125866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 30691177 - 30691102
Alignment:
Q  25 tgatagata-ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  30691177 tgatagataattttagcaagtgcactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 30691102  T

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Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 12541053 - 12541127
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||    
T  12541053 tgatagatattgtagcaagtgtactaaatactattgaagtagtaaaaatatcgttcccatgaggactgtgttaat 12541127  T

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Target: chr3; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 20728597 - 20728662
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20728597 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 20728662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 24129208 - 24129143
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  24129208 ttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttccctcgaggactgtgttaat 24129143  T

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Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 43927281 - 43927216
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  43927281 ttttagcaagtgtactaaatactatcaaagtagtaaaaatatcgttcccacgaggactgtgttaat 43927216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 50461395 - 50461561
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| || ||| ||||||||  ||||| |||| ||||||||||||||| || ||||||| |||||||| ||||| |||| |||||  |||||||      
T  50461395 gttaatatctatgatatgtaaatttcttttagtgcccgaggcagtagttttgatt-gcataaatttaaataa-cagaaaataa-gatagttttggaaaag 50461491  T
Q  193 ataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    | ||| |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  50461492 acaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 50461561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 11190967 - 11190899
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgt 93  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  11190967 tgatagatattttagtaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgagaactgt 11190899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 7487013 - 7486938
Alignment:
Q  25 tgatagatatttt-agcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||||||||    
T  7487013 tgatagatatttttagcaagtgtactaaatactatcgaagtaataaaaatatcgttcccacaaggactgtgttaat 7486938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 17528702 - 17528777
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| ||| ||||| ||||||||||||||||| ||||||||| |||||||||||||||||||    
T  17528702 aagaataagagagagatgagattaggtcgttcgaatcatctatgttcccctaattgatatactgcacatattcttg 17528777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 22416775 - 22416850
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  22416775 aagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacttattcttg 22416850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 37408934 - 37408860
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  37408934 aagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 37408860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 2775726 - 2775661
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  2775726 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 2775661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 2778969 - 2778904
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  2778969 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 2778904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 6922952 - 6922887
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||    
T  6922952 ttttagcaagtatactaaatactatcgaagtagtaaaaatatcgttcccacgaagactgtgttaat 6922887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 16244117 - 16244052
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  16244117 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 16244052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 25584921 - 25584856
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  25584921 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 25584856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 45896625 - 45896560
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  45896625 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 45896560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 10106499 - 10106614
Alignment:
Q  147 ttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggt 246  Q
    |||||||||||||||||||||||| ||||||||||  |||||||  |||   ||| |||| ||  |||||||| ||||||||||||||  ||||||||||    
T  10106499 ttgcataaaattaaataaacagaaaataaagatagttttggaaaatatatatgagagatgagactaggtcttttgaatcatctatgtt-tcctaattggt 10106597  T
Q  247 atactgcacatattctt 263  Q
    ||||||||| |||||||    
T  10106598 atactgcacctattctt 10106614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 12561174 - 12561250
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||| |||| | | ||||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  12561174 aaagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattgatatactgcacctattcttg 12561250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 27092148 - 27092073
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||| |||| |||| ||||||||||||||||||||| |||||  ||||||||||||||||||| |||||||    
T  27092148 aaagaataatagagagatgagatcaggtctttcgaatcatcgatgttctcctaattggtatactgcacctattctt 27092073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 28008011 - 28008086
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||| ||| |||| ||||||||||| |||||||    
T  28008011 aaagaataagagagagatgagattaggtctttcgaatcatctatgttccccaaatttgtatactgcacctattctt 28008086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 46885193 - 46885118
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||| ||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  46885193 aagaataggagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 46885118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 52990953 - 52990878
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | ||||||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  52990953 aagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtataccgcacctattcttg 52990878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 2775935 - 2775861
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| |||  |||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||||||||    
T  2775935 tgatagatttttgtgcaagtgtactaaatactatcgaagtaataaaaatatcgttcccacaaggactgtgttaat 2775861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 2779177 - 2779103
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| |||  |||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||||||||    
T  2779177 tgatagatttttgtgcaagtgtactaaatactatcgaagtaataaaaatatcgttcccacaaggactgtgttaat 2779103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 6434525 - 6434604
Alignment:
Q  23 cctgatagatattttagcaagtgtactaaatattatcgaag---tagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||| |||||||||||| |||||||| ||||||||   || ||||| |||||||||||||||||||||||||||    
T  6434525 cctgatagattttttagcaagtgcactaaatactatcgaagtaataataaaaatatcgttcccacgaggactgtgttaat 6434604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 29343824 - 29343889
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  29343824 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattctt 29343889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 43927079 - 43927014
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  43927079 agagagatgagatcatgtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 43927014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 261
Target Start/End: Complemental strand, 47051843 - 47051677
Alignment:
Q  95 ttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaaga 192  Q
    ||||||| ||| |||||||||||  ||||| |||| |||||||||| || ||| |||||||||  ||||||| ||||| |||| |||||  |||||||      
T  47051843 ttaatatctagcatgtgtaaatttcttttagtgcccgaggcagtaggtt-ggtgtgcataaaaagtaaataa-cagaaaataa-gatagttttggaaaag 47051747  T
Q  193 ataa-gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    | || ||||| |||| ||||||||||||||||||||||||||| |||||| ||||||||||||| |||||    
T  47051746 acaatgagagagatgagatcaggtctttcgaatcatctatgttcccctaactggtatactgcacctattc 47051677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 53816261 - 53816196
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||||||| ||||||||| |||||||    
T  53816261 ttttagcaagtgtactaaatactatcgtagtagtaaaaatatcgttccaacgaggactatgttaat 53816196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 8461257 - 8461321
Alignment:
Q  35 tttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| || ||||| |||||||||    
T  8461257 tttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcacatgaggaatgtgttaat 8461321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 10881719 - 10881659
Alignment:
Q  203 gatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  10881719 gatgagatcaagtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 10881659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 10885087 - 10885036
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  10885087 aggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 10885036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 11784996 - 11784945
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  11784996 aggtctttcgaatcatcgatgttcccctaattggtatactgcacatattctt 11784945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 17531597 - 17531672
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | ||||| ||||||||||||||||| | |||||||||||||||||| ||||||||    
T  17531597 aagaataagagagagatgagtttaggtcgttcgaatcatctatgttcctctaattggtatactgcacctattcttg 17531672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 25442800 - 25442875
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | |||||||||||||||| |||||| |||||||||||||| ||||| ||||||||    
T  25442800 aagaataagagagagatgagtttaggtctttcgaatcatttatgttcccctaattggtatattgcacctattcttg 25442875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 32367070 - 32367136
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgca 254  Q
    |||||||||||||| |||| | | | ||||||||||||||||||||| |||||||||||||||||||    
T  32367070 aaagaataagagagagatgagtttaagtctttcgaatcatctatgtttccctaattggtatactgca 32367136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 10902184 - 10902127
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcac 255  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||| |||||    
T  10902184 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcac 10902127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 49742869 - 49742934
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||||||||||||||||||| |||||| |||||||||||||| ||||| |||||||    
T  49742869 agagagatgagatcaggtctttcgaatcatttatgttcccctaattggtatattgcacctattctt 49742934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 52309565 - 52309630
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||    
T  52309565 agagagatgagatcaggtctttcgaatcaactatgttcccctaattggtatattgcacctattctt 52309630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 54461311 - 54461194
Alignment:
Q  147 ttgcataaaattaaataaacagaatataaagatagagttggaaagaata-agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattgg 245  Q
    |||||||||||||||||||||||| ||||||||||  |||||||  ||| |  ||| |||| ||  ||||||||||| ||||| ||||| ||| ||| ||    
T  54461311 ttgcataaaattaaataaacagaaaataaagatagttttggaaactatatatggagagatgagactaggtctttcgagtcatcaatgttccccaaatggg 54461212  T
Q  246 tatactgcacatattctt 263  Q
    |||||||||| |||||||    
T  54461211 tatactgcacctattctt 54461194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 28327793 - 28327733
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||| ||  | |||||||||||||||| |||||||||||||||||||||||||||    
T  28327793 gcaagtgtaccaataactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 28327733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 28331118 - 28331058
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||| ||  | |||||||||||||||| |||||||||||||||||||||||||||    
T  28331118 gcaagtgtaccaataactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 28331058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 17039962 - 17040037
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||  ||| ||||||||||||||||||||| ||||| || ||||||||||||  ||| |||||||    
T  17039962 aaagaataagagagaaatgagatcaggtctttcgaatcatcgatgttcccttaattggtatacaacacttattctt 17040037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 28266328 - 28266285
Alignment:
Q  56 tatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  28266328 tatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 28266285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 31549406 - 31549351
Alignment:
Q  208 gatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||||| |||||||||| ||| |||||||||||||||||||| |||||||    
T  31549406 gatcaggtcttttgaatcatctaagtttccctaattggtatactgcacctattctt 31549351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 48063791 - 48063857
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||| |||| |||||||||| ||||| |||||||||||||||| |||||||||||| |||||||    
T  48063791 tgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 48063857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 48063976 - 48064051
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | |  |||| ||||||||||||||||| |||||||||||||||||||  ||||||||    
T  48063976 aagaataagagagagatgagtttgggtcgttcgaatcatctatgttcccctaattggtatactgcatctattcttg 48064051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 15195109 - 15195159
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgagga 89  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  15195109 gcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgagga 15195159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 17141661 - 17141587
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||| |||| | | |||||||| |||| ||||||||| |||||||||||||| ||||| |||||||    
T  17141661 aagaataagagagagatgagcttaggtcttttgaattatctatgttcccctaattggtatattgcacctattctt 17141587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 18641556 - 18641598
Alignment:
Q  57 atcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  18641556 atcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 18641598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 18644523 - 18644594
Alignment:
Q  25 tgatagatatttt-agcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||| |||||||| ||||||||     |||||||||||| |||||||||||||||||||||||||||    
T  18644523 tgatagatatttttagcaagtgcactaaataa----gaagtagtaaaaatatcgttcccacgaggactgtgttaat 18644594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 35751686 - 35751628
Alignment:
Q  197 gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcac 255  Q
    ||||| |||| ||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  35751686 gagagagatgagatcaggtctttcgaatcatcgatgttcccctaatttgtatactgcac 35751628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 30219947 - 30220020
Alignment:
Q  190 agaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||| ||||| |||| ||||| ||||||||||||||||| ||| |||||||||||  ||||||| |||||||    
T  30219947 agaatatgagagagatgagatcatgtctttcgaatcatctaagttcccctaattggtcaactgcacctattctt 30220020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 35412806 - 35412689
Alignment:
Q  147 ttgcataaaattaaataaacagaatataaagatagagttggaaagaata-agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattgg 245  Q
    ||||||||||||||||||| |||| |||| |||||  |||||||  ||| |  ||| |||| ||  ||||||||||| ||||| ||||| | ||||||||    
T  35412806 ttgcataaaattaaataaatagaaaataaggatagttttggaaaatatatatggagagatgagactaggtctttcgagtcatcaatgttcctctaattgg 35412707  T
Q  246 tatactgcacatattctt 263  Q
    |||||||||| |||||||    
T  35412706 tatactgcacctattctt 35412689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 46885343 - 46885290
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||| |||||||    
T  46885343 gcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 46885290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 47055274 - 47055107
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| |||||||||||||||  ||||| ||||  ||||||||| || ||| |||||||||   ||  ||||||| |||| |||||  |||||||      
T  47055274 gttaatatctaggatgtgtaaatttcttttagtgcccaaggcagtaggtt-ggtgtgcataaaaactaaagaacagaaaataa-gatagttttggaaaag 47055177  T
Q  193 ataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    | ||| |||| |||| ||||||||||||||||||||||||||| || ||| | ||||||||||| |||||    
T  47055176 acaaggagagagatgagatcaggtctttcgaatcatctatgttcccataactagtatactgcacctattc 47055107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 55031960 - 55032009
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  55031960 aggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 55032009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 55034820 - 55034869
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  55034820 aggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 55034869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 3840756 - 3840696
Alignment:
Q  203 gatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| ||||||||||||||||||||| ||||| ||||||||| |||||| ||| |||||||    
T  3840756 gatgagatcaggtctttcgaatcatccatgttcccctaattgatatactacacctattctt 3840696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 41977240 - 41977180
Alignment:
Q  203 gatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||||| ||||||||||||||| ||||  ||||||||||||||||||| |||||||    
T  41977240 gatgagatcagatctttcgaatcatctgtgttctcctaattggtatactgcacttattctt 41977180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 54720201 - 54720149
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||||||||||||| || ||||||||||| ||||| ||||||||    
T  54720201 aggtctttcgaatcatctatgtttccataattggtatattgcacctattcttg 54720149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 9392968 - 9392925
Alignment:
Q  208 gatcaggtctttcgaatcatctatgttgccctaattggtatact 251  Q
    |||||||||||| |||||||||||||| ||||||||||||||||    
T  9392968 gatcaggtcttttgaatcatctatgttcccctaattggtatact 9392925  T

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Target: chr3; HSP #92
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 17528513 - 17528579
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||| |||| |||||||||| ||||| |||| ||||||||||| |||||||||||| |||||||    
T  17528513 tgatagat-ttttggcaagtgtaccaaatactatcaaagtagtaaaaatatcgttcccacaaggactg 17528579  T

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Target: chr3; HSP #93
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 17531423 - 17531474
Alignment:
Q  41 aagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||| ||||| |||||||||||||||| |||||||||||| |||||||    
T  17531423 aagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 17531474  T

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Target: chr3; HSP #94
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 22993449 - 22993496
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaa 71  Q
    ||||||||||||||||||||||||||||| | |||||||||| |||||    
T  22993449 ctgatagatattttagcaagtgtactaaaaactatcgaagtaataaaa 22993496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 52200143 - 52200092
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||  ||||| |||||||||||||||||||| |||||||    
T  52200143 aggtctttcgaatcattgatgttcccctaattggtatactgcacctattctt 52200092  T

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Target: chr3; HSP #96
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 34983554 - 34983604
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgagga 89  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||| ||||    
T  34983554 gcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaagga 34983604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 2784469 - 2784394
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagta--tcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||  |  ||||  |||||||||||||||||||    
T  2784469 tgatagatattttagcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaat 2784394  T

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Target: chr3; HSP #98
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 25442612 - 25442668
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    ||||||||| |||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  25442612 ctgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcc 25442668  T

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Target: chr3; HSP #99
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 54720403 - 54720350
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||||| ||||| |||||||||||||||| ||||||||| || |||||||    
T  54720403 gcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcctacaaggactg 54720350  T

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Target: chr3; HSP #100
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 32366890 - 32366938
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  32366890 attttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcc 32366938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 34983817 - 34983869
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| ||||||||| |||| |||||||||| |||| ||||||||    
T  34983817 aggtctttcgaatgatctatgttcccctgattggtataccgcacctattcttg 34983869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 11785210 - 11785151
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    ||||| |||||||||| ||||| |||| ||||||||||| ||||| |||||| |||||||    
T  11785210 attttggcaagtgtaccaaatactatcaaagtagtaaaaatatcgctcccacaaggactg 11785151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 18883576 - 18883530
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaa 71  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||    
T  18883576 ctgatagatattttagcaagtgtactaaa-actatcaaagtagtaaaa 18883530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 25585120 - 25585053
Alignment:
Q  34 ttttagcaagtgtactaaatat-tatcgaagtagtaaaag-tatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||| |  |||||||||| |||||  |||||||||||| ||||||||||||||    
T  25585120 ttttagcaagtgtactaaaaacgtatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 25585053  T

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Target: chr3; HSP #105
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 52200360 - 52200282
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatat-tatcgaagtagtaaaagta--tcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||| |||| || |||||||||| |||||  |  ||||  |||||||||||||||||||    
T  52200360 ctgatagatattttagcaagtgtattaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaat 52200282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 19301113 - 19301163
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttg 144  Q
    ||||||||| ||||||||||||||||||| || || |||||||||| ||||    
T  19301113 gttaatattcaggatgtgtaaattattttgattcccgaggcagtagatttg 19301163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 19304539 - 19304608
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataa 164  Q
    ||||||||| ||||||||||||||||||| |||| ||||||| ||| |||   | ||||||||||||||||    
T  19304539 gttaatattgaggatgtgtaaattattttgatgcatgaggcaatagattt-aatggcataaaattaaataa 19304608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 22993554 - 22993615
Alignment:
Q  103 taggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataa 164  Q
    ||||||||||||||||||||| |||||||||||  || |||| | ||||||| | |||||||    
T  22993554 taggatgtgtaaattattttagtgcctgaggcaagaggtttgttatgcataatagtaaataa 22993615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 25486386 - 25486341
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgtt 234  Q
    ||||||||||||||| || |||||||| |||||||||||| |||||    
T  25486386 aagaataagagaggggtgagatcaggtttttcgaatcatcgatgtt 25486341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 54
Target Start/End: Complemental strand, 28266371 - 28266342
Alignment:
Q  25 tgatagatattttagcaagtgtactaaata 54  Q
    ||||||||||||||||||||||||||||||    
T  28266371 tgatagatattttagcaagtgtactaaata 28266342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 52991134 - 52991085
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttccca 83  Q
    |||| |||| |||||||||||||| ||||||||||||| |||||| ||||    
T  52991134 ttttggcaattgtactaaatattaccgaagtagtaaaaatatcgtgccca 52991085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 260
Target Start/End: Original strand, 3292903 - 3292970
Alignment:
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||| ||||| |||| |||||||||||| ||||||||| | || |||||||||||||| ||||| ||||    
T  3292903 aatatgagagagatgagatcaggtcttttgaatcatctgt-ttcccctaattggtatattgcacctatt 3292970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 52
Target Start/End: Complemental strand, 3840970 - 3840942
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaa 52  Q
    |||||||||||||||||||||||||||||    
T  3840970 ctgatagatattttagcaagtgtactaaa 3840942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 22993660 - 22993708
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||||||||||||| |||| ||| |||||||||||| ||||||| ||||    
T  22993660 aggtctttcgaatcctctaagttcccctaattggtacactgcacctatt 22993708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 45896826 - 45896757
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaag----tatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||| ||||||||| |||||||||| |||||     |||||| ||||| ||||||||||||||    
T  45896826 ttttagcaagtatactaaatactatcgaagtaataaaaaaaaatatcgtccccacaaggactgtgttaat 45896757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 8e-73; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 25 - 263
Target Start/End: Complemental strand, 28111413 - 28111152
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat----atttag--------------- 105  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    ||||||                   
T  28111413 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatat 28111314  T
Q  106 ----gatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagag 201  Q
        |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  28111313 ttaggatgtgtaaattattttagtgtctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagttttggaaagaataagagag 28111214  T
Q  202 ggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
     |||| |||||| |||||||||||||||||||| |||||||||||||||||||| |||||||    
T  28111213 agatgagatcagatctttcgaatcatctatgttcccctaattggtatactgcacctattctt 28111152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 24 - 263
Target Start/End: Complemental strand, 2794585 - 2794323
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat----atttag-------------- 105  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    ||||||                  
T  2794585 ctgatagatcttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaata 2794486  T
Q  106 -----gatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagaga 200  Q
         ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  2794485 tttaggatgtgtaaattattttaatgtctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagttttggaaagaaaaagaga 2794386  T
Q  201 gggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    | |||| ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  2794385 gagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactgcacctattctt 2794323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 20399118 - 20398949
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  20399118 gttaatatctaggatgtgtaaatttcttttagtgcctgaggcagtagttttggtttgcataaaattaaataa-cataaaataaagatagagttggaaaga 20399020  T
Q  193 ataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  20399019 ataagagagagatgagatcaggtctttcgagtcatctatgttcccctaattggtatactgcacctattctt 20398949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 23021819 - 23021951
Alignment:
Q  131 aggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatcta 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||| |||||||||||||||||||    
T  23021819 aggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagatagagatgagattaggtctttcgaatcatcta 23021918  T
Q  231 tgttgccctaattggtatactgcacatattctt 263  Q
     ||| |||||||||||||||||||| |||||||    
T  23021919 agttcccctaattggtatactgcacctattctt 23021951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 95 - 264
Target Start/End: Original strand, 3796687 - 3796855
Alignment:
Q  95 ttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaagaa 193  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||| || || |||| |||||||||||||||||    
T  3796687 ttaatatttaggatgtgtaaattattttagtgcatgaggcagtagttttggtttgcataaaaagtaaataa-cataaaataa-gatagagttggaaagaa 3796784  T
Q  194 taagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  3796785 taagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 3796855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 97 - 263
Target Start/End: Original strand, 49498363 - 49498525
Alignment:
Q  97 aatatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaat 194  Q
    |||||||||||||||||||||  ||| |  ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  49498363 aatatttaggatgtgtaaatttcttttagttgccctaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgga------ 49498456  T
Q  195 aagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||| |||| ||| ||||||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  49498457 aagagagagatgagattaggtctttcgaatcatctaagttcccctaattggtatactgcacctattctt 49498525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 27536297 - 27536372
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  27536297 ctgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcacacgaggactgtgttaat 27536372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 37183722 - 37183889
Alignment:
Q  93 tgttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaag 191  Q
    ||||||||| |||||||||||||||  ||||| |||| ||||||||||||||| || ||||||| |||||||| ||||| |||| |||||  |||||||     
T  37183722 tgttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-gcataaatttaaataa-cagaaaataa-gatagttttggaaaa 37183818  T
Q  192 aataa-gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
     | || ||||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  37183819 gacaatgagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 37183889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 23021686 - 23021761
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||| |||||||    
T  23021686 ctgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccatgaggactctgttaat 23021761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 20448189 - 20448115
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  20448189 tgatagatactttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacaaggactgtgttaat 20448115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 20533956 - 20533882
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  20533956 tgatagatactttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacaaggactgtgttaat 20533882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 23441132 - 23441194
Alignment:
Q  95 ttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaat 157  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23441132 ttaatatttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgcataaaat 23441194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 27536390 - 27536557
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaag 191  Q
    ||||||||||||||||||||||||  ||||| |||| ||||||||||||||| || ||||||||  ||||||| ||||| |||| |||||  |||||||     
T  27536390 gttaatatttaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-gcataaaaagtaaataa-cagaaaataa-gatagttttggaaaa 27536486  T
Q  192 aataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
     | ||| |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  27536487 gacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 27536557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 1950222 - 1950287
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  1950222 ttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 1950287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 94 - 260
Target Start/End: Original strand, 45960604 - 45960769
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| |||||||||||||||  ||||| |||| ||||||||||||||| || ||||||| |||||||| ||||| |||| |||||  |||||||      
T  45960604 gttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-gcataaatttaaataa-cagaaaataa-gatagttttggaaaag 45960700  T
Q  193 ataaga-gagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    | |||| ||| |||| ||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||    
T  45960701 acaagaagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtataatgcacctatt 45960769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 49498267 - 49498342
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||| |||||||||| | |||||||||||||| ||||||||||||||||| |||||||||    
T  49498267 ctgatagatattttagcaagcgtactaaatactgtcgaagtagtaaaaatatcgttcccacgaggattgtgttaat 49498342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 31205194 - 31205120
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||| |||||||||| ||||| ||| |||||||||||| |||||||||||||||||||||||||||    
T  31205194 tgatagatattttggcaagtgtaccaaatactattgaagtagtaaaaatatcgttcccacgaggactgtgttaat 31205120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 45960512 - 45960586
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||| ||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  45960512 tgatagaaattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 45960586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 673023 - 673099
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||| |||| ||||| || |||||||||||||||||| |||||||||||||||||||| ||||||||    
T  673023 aaagaataagagagagatgagatcatgtatttcgaatcatctatgtttccctaattggtatactgcacctattcttg 673099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 119 - 261
Target Start/End: Complemental strand, 31205076 - 31204936
Alignment:
Q  119 ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataag-agagggatgcgatcaggtct 217  Q
    ||||| |||| ||||||||||||||| || ||||||| |||||||| ||||| |||| |||||  |||||||  | ||| |||| |||| ||||||||||    
T  31205076 ttttagtgcccgaggcagtagttttgatt-gcataaatttaaataa-cagaaaataa-gatagttttggaaaagacaaggagagagatgagatcaggtct 31204980  T
Q  218 ttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    ||||||||||| ||||| |||||||||||||||||||| |||||    
T  31204979 ttcgaatcatcgatgttcccctaattggtatactgcacctattc 31204936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 45941577 - 45941512
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  45941577 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 45941512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 254
Target Start/End: Original strand, 34732221 - 34732379
Alignment:
Q  96 taatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaata 195  Q
    |||||| ||||||||||||||||||||| |||  ||  || |||||||| || | ||||||||||||||  |||| ||||||||||  |||||||  |||    
T  34732221 taatatataggatgtgtaaattattttagtgctcgaaacactagttttgatt-gaataaaattaaataagaagaaaataaagatagttttggaaaagata 34732319  T
Q  196 ag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgca 254  Q
    || ||||  ||| |||||| ||||||||||| |||  ||| |||||||||||||||||||    
T  34732320 aggagagatatgagatcagttctttcgaatcctctgagttcccctaattggtatactgca 34732379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 2405670 - 2405604
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||| |||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||    
T  2405670 agagagatgagatcaggtctttcgaatcatctatgttttcctaattggtatactgcacctattcttg 2405604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 3796602 - 3796668
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||| |||||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  3796602 attttggcaagtgtaccaaatactatcgaagtagtaaaaatattgttcccacgaggactgtgttaat 3796668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 21107254 - 21107319
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  21107254 agagagatgagatcaggtctttcgaatcatctatgttcacctaattggtatactgcacctattctt 21107319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 21111121 - 21111186
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  21111121 agagagatgagatcaggtctttcgaatcatctatgttctcctaattggtatactgcacctattctt 21111186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 21114461 - 21114526
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  21114461 agagagatgagatcaggtctttcgaatcatctatgttctcctaattggtatactgcacctattctt 21114526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 905638 - 905713
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||| |||| |||| | |  |||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  905638 aaagaataaaagagagatgagttttggtctttcgaatcatctatgtttccctaattggtatactgcacttattctt 905713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 1950432 - 1950483
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  1950432 aggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 1950483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 37183631 - 37183705
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||| |||||||||| | ||| |||||||||||||||| |||  || |||||||||||||||||||    
T  37183631 tgatagatattttggcaagtgtaccatatactatcgaagtagtaaaaatattatttccacgaggactgtgttaat 37183705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 21018430 - 21018495
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||| |||||||| || |||||||    
T  21018430 agagagatgagatcaggtctttcgaatcatctatgttcccctaatttgtatactgaacctattctt 21018495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 6070723 - 6070799
Alignment:
Q  23 cctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||||||| ||||   |||||||||| |||||  ||||||||||| |||| |||||||||    
T  6070723 cctgatagatattttagcaagtgtaataaaacgtatcgaagtaataaaaacatcgttcccacaaggattgtgttaat 6070799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 30938422 - 30938505
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaa-ttaaataaacagaatataaag 177  Q
    |||| ||| ||||||||||||||||||||| |||| |||||||||| ||| || ||||||||| |||||||||| ||||||||||    
T  30938422 gttactatctaggatgtgtaaattattttactgcccgaggcagtaggttt-gtgtgcataaaagttaaataaacggaatataaag 30938505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 20399191 - 20399136
Alignment:
Q  44 tgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||| |||||||||||    
T  20399191 tgtactaaatactatggaagtagtaaaaatatcgttcccacgagaactgtgttaat 20399136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 29643175 - 29643249
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||| |||| | | ||||||||||||||||| ||||| |||||| | ||||||||||| |||||||    
T  29643175 aagaataagagagagatgagtttaggtctttcgaatcatcgatgttcccctaactagtatactgcacctattctt 29643249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 45941779 - 45941709
Alignment:
Q  31 atattttagcaagtgtactaaatat-tatcgaagtagtaaaag-tatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||| || |||||||||| |||||  |||||||||||| ||||||||||||||    
T  45941779 atattttagcaagtgtactaaaaatgtatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 45941709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 23441053 - 23441113
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||| ||  | |||||||||||||||| ||||||||||||| |||||||||||||    
T  23441053 gcaagtgtaccaataactatcgaagtagtaaaaatatcgttcccacggggactgtgttaat 23441113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 41058279 - 41058330
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||||||||| | ||||||||||| |||||| |||||||    
T  41058279 aggtctttcgaatcatctatgttcctctaattggtatgctgcacctattctt 41058330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 6070921 - 6070979
Alignment:
Q  203 gatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    |||| |||||||| |||||||||||| ||||| |||||||||||||| ||||| |||||    
T  6070921 gatgagatcaggtttttcgaatcatcgatgttcccctaattggtatattgcacctattc 6070979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 33898657 - 33898615
Alignment:
Q  56 tatcgaagtagtaaaagtatcgttcccacgaggactgtgttaa 98  Q
    |||||||||||||||| |||||||||||| |||||||||||||    
T  33898657 tatcgaagtagtaaaaatatcgttcccacaaggactgtgttaa 33898615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 905463 - 905514
Alignment:
Q  41 aagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||  ||||| |||||||||||||||| |||||||||||| |||||||    
T  905463 aagtgtatcaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 905514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 27354719 - 27354766
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacga 86  Q
    ||||||| || ||||| |||||||||||||||| ||||||||||||||    
T  27354719 gcaagtgcaccaaatactatcgaagtagtaaaaatatcgttcccacga 27354766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 27355173 - 27355232
Alignment:
Q  103 taggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaat 162  Q
    ||||||| ||||||||||||| |||| |||||||||| |||| | ||||||||| |||||    
T  27355173 taggatgcgtaaattattttagtgcccgaggcagtaggtttgttgtgcataaaagtaaat 27355232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 8e-70; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 10664159 - 10663990
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  10664159 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagttttggaaagaa 10664060  T
Q  194 taagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
     ||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||| ||| |||||||    
T  10664059 aaagagagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactacacctattctt 10663990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 16954036 - 16953868
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||    
T  16954036 gttaatatttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgcataaaattaaataa-cagaatataaagatagttttggaaagaa 16953938  T
Q  194 taagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  16953937 taagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 16953868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 94 - 260
Target Start/End: Original strand, 25591338 - 25591504
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcat-aaaattaaataaacagaatataaagatagagttgg-aaag 191  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| |||| ||||||||||||||||||||||||  |||| ||||    
T  25591338 gttaatatttaggatgtgtaaattattttagtgcctgaggtagtagttttgatttgcataaaaagtaaataaacagaatataaagatagttttggaaaag 25591437  T
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||||||||  |||| |||||||| |||||||||||||||||| |||||||||||||||||||| ||||    
T  25591438 aataagaga--gatgagatcaggtgtttcgaatcatctatgttcccctaattggtatactgcacctatt 25591504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 45155128 - 45155297
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||||||||| || |||||||||||||||||||||| ||||||||||  |||||||  |    
T  45155128 gttaatatctaggatgtgtaaattattttagtgcccgaggcagtagttttgatt-gcataaaattaaataaacagaaaataaagatagttttggaaaaga 45155226  T
Q  194 taag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| | || ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  45155227 taaggagagagctgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattctt 45155297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 107 - 263
Target Start/End: Original strand, 38248270 - 38248427
Alignment:
Q  107 atgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaaca-gaatataaagatagagttggaaagaataa-gagaggga 204  Q
    ||||||||||||||||| |||| || |||||||||||| || ||||||||||||||||||| ||| ||||||||||  |||||||  |||| ||||| ||    
T  38248270 atgtgtaaattattttagtgcccgatgcagtagttttgatt-gcataaaattaaataaacaagaaaataaagatagttttggaaaagataaagagagaga 38248368  T
Q  205 tgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  38248369 tgcgatcaggtctttcgaatcatctatgttcccctaattggtatattgcacatattctt 38248427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 95 - 263
Target Start/End: Complemental strand, 25231342 - 25231172
Alignment:
Q  95 ttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaat 194  Q
    |||||||||||||||  |||||||||| ||||||||| |||||||||| | || ||||||| |||||||||||||| |||||||||   |||||||  ||    
T  25231342 ttaatatttaggatggataaattatttcaatgcctgaagcagtagtttagatt-gcataaagttaaataaacagaaaataaagataattttggaaaagat 25231244  T
Q  195 aa---gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||   ||||| | || ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  25231243 aaagagagagagttgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 25231172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 18824254 - 18824420
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaa-g 191  Q
    |||||||| |||||||||||||||  ||||| |||| ||||||||||||||| || ||||||| |||||||| ||||| |||| |||||  ||||||| |    
T  18824254 gttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-gcataaatttaaataa-cagaaaataa-gatagttttggaaaag 18824350  T
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    || | ||||| |||| |||||||| |||||||||||| ||||| |||||||||||||||||||| |||||    
T  18824351 aaaaggagagagatgagatcaggtatttcgaatcatcgatgttcccctaattggtatactgcacctattc 18824420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 18825747 - 18825913
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaa-g 191  Q
    |||||||| |||||||||||||||  ||||| |||||||||||||| ||||| || | ||||| |||||||| ||||| |||| |||||  ||||||| |    
T  18825747 gttaatatctaggatgtgtaaatttcttttagtgcctgaggcagtaattttgatt-gtataaatttaaataa-cagaaaataa-gatagttttggaaaag 18825843  T
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    || | ||||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  18825844 aaaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 18825913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 18721193 - 18721309
Alignment:
Q  147 ttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggt 246  Q
    |||||||||||||||||||||||| |||||||||| ||||||||  |||    || |||| ||  ||||||||||||||||||||||| |||||||||||    
T  18721193 ttgcataaaattaaataaacagaaaataaagatagtgttggaaaatatatataagagatgagactaggtctttcgaatcatctatgttcccctaattggt 18721292  T
Q  247 atactgcacatattctt 263  Q
    ||||||||| |||||||    
T  18721293 atactgcacctattctt 18721309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 97 - 255
Target Start/End: Complemental strand, 23644078 - 23643919
Alignment:
Q  97 aatatttaggatgtgtaaattattttaatg-cctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaata 195  Q
    |||||||||||||| |||||||||||  |  ||  ||||||||| |||| || |||||||||||||||||||||| ||||||||||  |||||||  |||    
T  23644078 aatatttaggatgtataaattattttgttttccctaggcagtagatttgatt-gcataaaattaaataaacagaaaataaagatagttttggaaaagata 23643980  T
Q  196 ag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcac 255  Q
    || |||| ||||  |||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  23643979 aggagagagatgatatcaggtcgttcgaatcatcgatgttcccctaattggtatactgcac 23643919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 16954129 - 16954054
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  16954129 ctgatagatattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 16954054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 23597561 - 23597486
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  23597561 ctgataaatattttagcaagtatactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 23597486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 10664303 - 10664230
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  10664303 tgatagat-ttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 10664230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 18825655 - 18825729
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| |||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  18825655 tgatagattttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 18825729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 10498167 - 10498243
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  10498167 aaagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 10498243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 23619318 - 23619393
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  23619318 aagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 23619393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 25591245 - 25591320
Alignment:
Q  25 tgatagatatttt-agcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||  |||||||||||    
T  25591245 tgatagatatttttagcaagtgtactaaatattatcgaagtggtaaaaatatcgttcccacgaaaactgtgttaat 25591320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 5584211 - 5584273
Alignment:
Q  37 tagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  5584211 tagcaagtgtactaaatactatcgaagtagtaaaaatatcgttctcacgaggactgtgttaat 5584273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 12516383 - 12516480
Alignment:
Q  165 acagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||| |||||||| | |||| ||||||| |||||| ||||  ||||||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  12516383 acagaaaataaagattg-gttgtaaagaatgagagagagatgaaatcaggtctttcgaatcatctatattcccctaattggtatactgcacctattctt 12516480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 18721062 - 18721127
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||    
T  18721062 ttttagcaagtatactaaatactattgaagtagtaaaaatatcgttcccacgaggactgtgttaat 18721127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 20887691 - 20887626
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  20887691 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 20887626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 5584359 - 5584422
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  5584359 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattc 5584422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 8912003 - 8911937
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  8912003 tgatagat-ttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 8911937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 14421904 - 14421837
Alignment:
Q  196 agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  14421904 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattgatatactgcacctattctt 14421837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 18824162 - 18824236
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||| | |||| || ||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  18824162 tgataggttttttggctagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 18824236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 21279723 - 21279797
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||| |||||| |||| |||| |||||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  21279723 aagaatgagagagagatgtgatcgggtctttcgaatcatcgatgttcccctaattggtatactgcacctattctt 21279797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 13197028 - 13196948
Alignment:
Q  183 gttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||||||||||||  |||| ||||||||||||| |||||||||||||  | ||||||||||||||||| |||||||    
T  13197028 gttgtaaagaataagagatagatgagatcaggtctttcaaatcatctatgttctcttaattggtatactgcacttattctt 13196948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 36710598 - 36710662
Alignment:
Q  197 gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    ||||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  36710598 gagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 36710662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 31284839 - 31284764
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | ||||| ||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  31284839 aagaataagagagagatgagtttaggtcattcgaatcatctatgttcccctaattggtataccgcacctattcttg 31284764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 44027047 - 44027122
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||  ||| | | ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  44027047 aagaataagagagaaatgagtttaggtctttcgaatcatctatgttcccctaattgatataatgcacatattcttg 44027122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 10498016 - 10498081
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggact 91  Q
    |||||||| |||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||    
T  10498016 tgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggact 10498081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 25594620 - 25594685
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||||||||||||||||||||||| || |||||||| ||||||||||| |||||||    
T  25594620 agagagatgagatcaggtctttcgaatcatctatcttcccctaattagtatactgcacctattctt 25594685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 33883329 - 33883378
Alignment:
Q  214 gtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  33883329 gtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 33883378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 31285029 - 31284962
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    ||||||||| |||| |||||||||| ||||| |||||||||||||||| |||||||||||| |||||||    
T  31285029 ctgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 31284962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 5980270 - 5980341
Alignment:
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| ||||| |||| ||||| ||||||||||||||||||||| || ||||||||||||| ||| |||||||    
T  5980270 aatatgagagagatgagatcatgtctttcgaatcatctatgttcccttaattggtatactacacctattctt 5980341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 17931147 - 17931072
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||| ||||||| |||| ||| ||||||||||||||||| ||||| || ||||||||||| ||||| |||||||    
T  17931147 aaagaacaagagagagatgagattaggtctttcgaatcatcgatgtttccgtaattggtatattgcacctattctt 17931072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 20887889 - 20887823
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagt-aaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||| ||||||||| |||||||||| | |||| |||||||||||| ||||||||||||||    
T  20887889 ttttagcaagtatactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 20887823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 22173886 - 22173948
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||| ||| ||||    
T  22173886 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactacacctatt 22173948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 33419821 - 33419747
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||| ||||||| |||| | | |||||||||||||||| |||||| |||||||| ||||||||||| |||||||    
T  33419821 aagaagaagagagagatgagtttaggtctttcgaatcatttatgttcccctaatttgtatactgcacctattctt 33419747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 44026869 - 44026922
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||| |||||||    
T  44026869 gcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 44026922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 14589583 - 14589647
Alignment:
Q  197 gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    ||||| |||| ||| |||| |||||||||||| ||||| |||||||||||||||||||| |||||    
T  14589583 gagagagatgagattaggtatttcgaatcatcgatgttcccctaattggtatactgcacctattc 14589647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 5584291 - 5584330
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgagg 133  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  5584291 gttaatatttaggatgtgtaaattattttaatgtctgagg 5584330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 2560718 - 2560644
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||||||  ||| | ||||||||||| | ||||| ||||| | |||||||||||||||||| |||||||    
T  2560718 aagaataagagagaaatgaggtcaggtctttcaagtcatcgatgtttctctaattggtatactgcacctattctt 2560644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 12583167 - 12583099
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcat---ctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| || |||||||||||||||||   ||||||| |||||||||||||||||||| |||||||    
T  12583167 agagagatgagaccaggtctttcgaatcatgatctatgttcccctaattggtatactgcacctattctt 12583099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 22173700 - 22173773
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||  |||| |||||||||| ||| | |||||||||||||||| ||||||| |||||||||| ||||||||    
T  22173700 tgatagaatttttggcaagtgtaccaaa-actatcgaagtagtaaaattatcgtttccacgaggacagtgttaat 22173773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 2560896 - 2560851
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccac 84  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||||    
T  2560896 gcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccac 2560851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 30645835 - 30645760
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagta--tcgttcccacgaggactgtgttaat 99  Q
    ||||| |||||||||||||||||||||| |||||||||||| |||||  |  ||||  |||||||||||||||||||    
T  30645835 tgataaatattttagcaagtgtactaaa-attatcgaagtaataaaataagttcgtatccacgaggactgtgttaat 30645760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 8911791 - 8911739
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||| |||  ||| |||||||||||||||||||| ||||||||    
T  8911791 aggtctttcgaatcctctgagttcccctaattggtatactgcacctattcttg 8911739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 13197198 - 13197148
Alignment:
Q  41 aagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||| ||| |||||||||||||||||| |||||||||||||| |||||    
T  13197198 aagtgtaccaaaaattatcgaagtagtaaaa-tatcgttcccacgaagactg 13197148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 17931326 - 17931272
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgt 93  Q
    |||||||||| ||| | |||||||||||||||| ||| |||||||| ||||||||    
T  17931326 gcaagtgtaccaaaaactatcgaagtagtaaaaatattgttcccacaaggactgt 17931272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 30785079 - 30785025
Alignment:
Q  195 aagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtata 249  Q
    ||||||| | || |||||||||||||||||| |||| ||| ||||||||||||||    
T  30785079 aagagagaggtgagatcaggtctttcgaatcctctaagttcccctaattggtata 30785025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 21279562 - 21279599
Alignment:
Q  56 tatcgaagtagtaaaagtatcgttcccacgaggactgt 93  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  21279562 tatcgaagtagtaaaaatatcgttcccacaaggactgt 21279599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 33419997 - 33419944
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||||| ||||| |||||||||||||||| ||| ||| |||| |||||||    
T  33419997 gcaagtgtaccaaatactatcgaagtagtaaaaatattgtttccacaaggactg 33419944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 23619131 - 23619186
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    |||||||| |||| |||||||||| ||||| |||||||||||||||| ||| |||||    
T  23619131 tgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatattgttcc 23619186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 8e-70; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 2379495 - 2379326
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  2379495 gttaatatttaagatgtgtaaattattttagtgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagttttggaaagaa 2379396  T
Q  194 taagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  2379395 taagagagagatgagatcaggtctttcaaatcatctatgttcccctaattggtatactgcacctattctt 2379326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 25 - 263
Target Start/End: Complemental strand, 9954319 - 9954059
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat----atttag--------------- 105  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    ||||||                   
T  9954319 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatat 9954220  T
Q  106 ----gatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgg-aaagaataagaga 200  Q
        |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||    
T  9954219 ttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagttttggaaaagaataagaga 9954120  T
Q  201 gggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
      |||| |||||| |||||||||||||||||||| |||||||||||||||||||| |||||||    
T  9954119 --gatgagatcagctctttcgaatcatctatgttcccctaattggtatactgcacctattctt 9954059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 11402524 - 11402353
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaat-gcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaag 191  Q
    ||||| ||||||||||||||||||  ||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11402524 gttaaaatttaggatgtgtaaatttcttttaattgccctaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaag 11402425  T
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  11402424 aataagagagagatgagatcaggtctttcgattcatctatgtttccctaattggtatactgcacctattctt 11402353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 97 - 263
Target Start/End: Original strand, 23384612 - 23384780
Alignment:
Q  97 aatatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaat 194  Q
    |||||||||||||| ||||||  ||| |  ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23384612 aatatttaggatgtataaatttcttttagttgccctaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaat 23384711  T
Q  195 aagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||| |||| ||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  23384712 aagagagagatgagattaggtctttcgattcatctatgttcccctaattggtatactgcacctattctt 23384780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 97 - 261
Target Start/End: Original strand, 26942295 - 26942461
Alignment:
Q  97 aatatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaat 194  Q
    |||||||||||||| ||||||  ||| |  ||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26942295 aatatttaggatgtataaatttcttttagttgccctaggcagtagttttggtttgcataaaattaaataaacaaaatataaagatagagttggaaagaat 26942394  T
Q  195 aagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    ||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  26942395 aagagagagatgagatcaggtctttcgattcatctatgttcccctaattggtatactgcacctattc 26942461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 3596677 - 3596809
Alignment:
Q  131 aggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatcta 230  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||| ||| |||||||||||||||| ||    
T  3596677 aggcagtagttttggtttgcataaaattaaataaacagaatgtaaagatatagttggaaagaataagagagagatgagattaggtctttcgaatcattta 3596776  T
Q  231 tgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||||||||||||||||||| |||||||    
T  3596777 tgttcccctaattggtatactgcacctattctt 3596809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 263
Target Start/End: Original strand, 1125501 - 1125763
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat----atttag-------------- 105  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||    ||||||                  
T  1125501 ctgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccatgaggactgtgttaatctcaatttagcaataacgttaata 1125600  T
Q  106 -----gatgtgtaaa-ttattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgg-aaagaataaga 198  Q
         |||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||| ||||    
T  1125601 tctaggatgtgtaaatttcttttagtgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagttttggaaaagaacaaga 1125700  T
Q  199 gagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||  |||| || || |||||||||||||| ||||||  |||||||||||||||| || |||||||    
T  1125701 ga--gatgagagcatgtctttcgaatcatttatgttctcctaattggtatactggacctattctt 1125763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 14281377 - 14281548
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaa-ga 192  Q
    |||||||| ||||||||||||||||||||| ||||  | |||||||||||| || |||||||||||||||||||||| ||||||||||  ||||||| ||    
T  14281377 gttaatatctaggatgtgtaaattattttagtgcccaacgcagtagttttgatt-gcataaaattaaataaacagaaaataaagatagttttggaaaaga 14281475  T
Q  193 ata--agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    | |  |||||| ||||  |||||||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  14281476 aaaggagagagagatgacatcaggtctttcgaatcatctatgttcccctaattgggatactgcacctattctt 14281548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 95 - 263
Target Start/End: Complemental strand, 13005455 - 13005285
Alignment:
Q  95 ttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaat 194  Q
    ||||||| |||||||| ||||||||||   |||||||||||||||||||| || ||| |||||||||||||||||| ||||| ||||  |||||||  ||    
T  13005455 ttaatatctaggatgtttaaattatttatttgcctgaggcagtagttttgatt-gcagaaaattaaataaacagaaaataaaaatagttttggaaaagat 13005357  T
Q  195 aag---agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||   |||| |||| ||||||||||||| ||||||||||||| |||||||||||||||| ||| |||||||    
T  13005356 aaggagagagagatgagatcaggtctttcaaatcatctatgttcccctaattggtatacttcacctattctt 13005285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 5737921 - 5737991
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataa 164  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5737921 gttaatatctaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataa 5737991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 30655814 - 30655740
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||||||||    
T  30655814 tgatagatattttagcaagtgtactaaatactatcgaagtaataaaaatatcgttcccacaaggactgtgttaat 30655740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 23381946 - 23382011
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  23381946 ttttagcaagtgtactaaatactatcgaagtaataaaaatatcgttcccacgaggactgtgttaat 23382011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 23384526 - 23384591
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  23384526 ttttagcaagtgtactaaatactatcgaagtaataaaaatatcgttcccacgaggactgtgttaat 23384591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 18855978 - 18856054
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  18855978 aaagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 18856054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 22561077 - 22561191
Alignment:
Q  147 ttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggt 246  Q
    |||||||||| ||| ||| ||||| |||||||| | |||  |||||||||||||| |||| ||||||||||||| ||||||||| ||| |||||||||||    
T  22561077 ttgcataaaagtaactaa-cagaaaataaagattg-gtttaaaagaataagagagagatgagatcaggtctttcaaatcatctacgttcccctaattggt 22561174  T
Q  247 atactgcacatattctt 263  Q
    ||||||||| |||||||    
T  22561175 atactgcacctattctt 22561191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 94 - 240
Target Start/End: Complemental strand, 2372596 - 2372448
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    |||||||| |||||| |||||||||||||| || | |||| |||||||||| || |||||||||||||||||||||  ||||||||||  |||||||  |    
T  2372596 gttaatatctaggatttgtaaattattttagtgtccgaggaagtagttttgatt-gcataaaattaaataaacagatgataaagatagttttggaaaaga 2372498  T
Q  194 ta---agagagggatgcgatcaggtctttcgaatcatctatgttgcccta 240  Q
    ||   |||||| | || |||||  |||||||||||||||||||| |||||    
T  2372497 taaggagagagagttgagatcatctctttcgaatcatctatgttccccta 2372448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 94 - 260
Target Start/End: Complemental strand, 2846569 - 2846403
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    |||| ||| ||||||||||||||||||||  || |||||||||||| |||| || | |||||||||| | | ||||| ||||||||||  |||||||  |    
T  2846569 gttactatctaggatgtgtaaattattttggtgtctgaggcagtagatttgatt-gtataaaattaatttaccagaaaataaagatagttttggaaaaga 2846471  T
Q  194 taag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||| |||  |||| ||||| |||||||||||| |||| ||  |||||||||||||||||||| ||||    
T  2846470 taaggagatagatgagatcaagtctttcgaatcctctaagtccccctaattggtatactgcacctatt 2846403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 9839351 - 9839422
Alignment:
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  9839351 aatatgagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 9839422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 24400349 - 24400274
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  24400349 aagaataagagagagatgagtttaggtctttcgaatcatctatgtttccctaattggtatactgcacctattcttg 24400274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 24410468 - 24410393
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  24410468 aagaataagagagagatgagtttaggtctttcgaatcatctatgtttccctaattggtatactgcacctattcttg 24410393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 26896213 - 26896288
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  26896213 aagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 26896288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 4512646 - 4512572
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  4512646 aagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 4512572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 26942208 - 26942274
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||||    
T  26942208 attttagcaagtgtactaaatactatcgaagtagtaaaaatattgttcccacgtggactgtgttaat 26942274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 30655605 - 30655540
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  30655605 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacttattctt 30655540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 7128470 - 7128398
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  7128470 aaagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtataatgcacatatt 7128398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 13947189 - 13947113
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||  |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  13947189 aaagaataagagatagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 13947113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 24155319 - 24155395
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||| |||| | | |||||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  24155319 aaagaataagagagagatgagtttaggtctttcgaatcatatatgttcccctaattggtatactgcacctattcttg 24155395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 190
Target Start/End: Original strand, 28107612 - 28107707
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaa 190  Q
    |||||||| ||||||||||||||||||||| ||||  |||  ||||||||| || |||||||||||||||||||||| ||||||||||  |||||||    
T  28107612 gttaatatctaggatgtgtaaattattttagtgccctaggttgtagttttgatt-gcataaaattaaataaacagaaaataaagatagttttggaaa 28107707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 11125651 - 11125725
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||| || |||| ||||| ||||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  11125651 aagaataagatagagatgggatcaagtctttcgaatcatcgatgttcccctaattggtatactgcacctattctt 11125725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 11187961 - 11188039
Alignment:
Q  23 cctgatagatatttt-agcaagtgtactaaatattatcgaagtagt-aaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||| |||| |||||||||||| ||||||||||||||    
T  11187961 cctgatagatatttttagcaagtgcactaaatactatcgaagtagtaaaaaatatcgttcccacaaggactgtgttaat 11188039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 11402608 - 11402542
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagt-aaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||||||||||||    
T  11402608 ttttagcaagtgtactaaatattatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 11402542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 28111666 - 28111759
Alignment:
Q  96 taatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaa 190  Q
    |||||| ||||||| ||||||||||||| ||||  ||||||||||||| | ||||||||||||||||||||| || ||||||||||  |||||||    
T  28111666 taatatctaggatgcgtaaattattttagtgccctaggcagtagtttt-gattgcataaaattaaataaacataaaataaagatagttttggaaa 28111759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 3596555 - 3596620
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||||||| | ||||||||||||    
T  3596555 ttttagcaagtttactaaatactatcgaagtagtaaaaatatcgttcccacaaagactgtgttaat 3596620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 17106573 - 17106638
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  17106573 agagagatgagatcaagtctttcgaatcatctatgttcccctaattggtatattgcacatattctt 17106638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 5737836 - 5737903
Alignment:
Q  32 tattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||| ||||||||||||||| |||||||||||||||| ||||||| || | ||||||||||||||    
T  5737836 tattttatcaagtgtactaaatactatcgaagtagtaaaaatatcgtttccgcaaggactgtgttaat 5737903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 6513419 - 6513352
Alignment:
Q  196 agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||| |||| |||||||||||||||||||||||| || ||||||||| |||||||||| |||||||    
T  6513419 agagagagatgagatcaggtctttcgaatcatctatattcccctaattgatatactgcacctattctt 6513352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 10290123 - 10290068
Alignment:
Q  208 gatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||    
T  10290123 gatcaggtctttcgaatcatctatgttccccgaattggtatactgcacttattctt 10290068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 19476148 - 19476097
Alignment:
Q  213 ggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  19476148 ggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 19476097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 20185895 - 20185840
Alignment:
Q  208 gatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||| |||||||    
T  20185895 gatcaggtttttcgaatcatctatgttcccctaattggtatactgcacctattctt 20185840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 22150096 - 22150151
Alignment:
Q  208 gatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||| |||||||    
T  22150096 gatcaggtttttcgaatcatctatgttcccctaattggtatactgcacctattctt 22150151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 32109838 - 32109764
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||| |||||||| |||| |||||| |||||||    
T  32109838 aagaataaaagagagatgagatcaggtctttcgaatcatcaatgttcccctaatttgtatgctgcacctattctt 32109764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 2379579 - 2379522
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggac 90  Q
    ||||| |||||||||| ||||| |||||||||||||||| ||||||||||||||||||    
T  2379579 attttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggac 2379522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 2372397 - 2372349
Alignment:
Q  215 tctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  2372397 tctttcgaatcatctatgttcccctagttggtatactgcacatattctt 2372349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 19476362 - 19476295
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    ||||||||| |||| |||||||||| ||||| |||||||||||||||| |||||||||||| |||||||    
T  19476362 ctgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 19476295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 5260073 - 5260023
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttg 144  Q
    |||||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  5260073 gttaatatctaggatgtgtaaattattttagtgcccgaggcagtagttttg 5260023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 34502703 - 34502627
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagta--tcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||  |  ||||  |||||||||||||||||||    
T  34502703 ctgatagatattttagcaagtgtactaaa-actatcgaagtagtaaaataagttcgtatccacgaggactgtgttaat 34502627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 24155139 - 24155188
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttccca 83  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  24155139 ttttagcaagtgtaccaaatactatcgaagtagtaaaaatatcgttccca 24155188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 24410643 - 24410591
Alignment:
Q  40 caagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| |||||||    
T  24410643 caagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 24410591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 11729112 - 11729171
Alignment:
Q  40 caagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||| |  |||||||||||    
T  11729112 caagtgtactaaatactatcgaagtaataaaaatatcgttcccacaaaaactgtgttaat 11729171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 28107748 - 28107803
Alignment:
Q  196 agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatact 251  Q
    |||||| ||||  ||||||| |||||||||||||||||| ||||||||||||||||    
T  28107748 agagagagatgatatcaggtatttcgaatcatctatgttcccctaattggtatact 28107803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 5738042 - 5738112
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttg-----ccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||||||||||||||||||||||||||      |||||||||||||||||||| |||||||    
T  5738042 agagagatgagatcaggtctttcgaatcatctatgttatgttcccctaattggtatactgcacctattctt 5738112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 4512823 - 4512770
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    ||||||||||  |||| |||||||||||||||| |||||||||||| |||||||    
T  4512823 gcaagtgtaccgaatactatcgaagtagtaaaaatatcgttcccacaaggactg 4512770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 13947373 - 13947317
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    ||||||||| |||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  13947373 ctgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcc 13947317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 23847932 - 23847865
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatc---tatgttgccctaattggtatactgcacatattct 262  Q
    |||| |||| |||||||||||||||||||||   ||| || |||||||||||||||||||| ||||||    
T  23847932 agagagatgagatcaggtctttcgaatcatcttttatattcccctaattggtatactgcacctattct 23847865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 28230742 - 28230689
Alignment:
Q  212 aggtctttcgaatcatctatgttgccc-taattggtatactgcacatattcttg 264  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||| ||||||||    
T  28230742 aggtctttcgaatcatttatgttacccctaattggtatactgcacctattcttg 28230689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 7128650 - 7128602
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  7128650 attttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcc 7128602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 18855798 - 18855846
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  18855798 attttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcc 18855846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 23008409 - 23008373
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaa 70  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23008409 ttttagcaagtgtactaaatactatcgaagtagtaaa 23008373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 23779955 - 23779991
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaa 70  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23779955 ttttagcaagtgtactaaatactatcgaagtagtaaa 23779991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 28230954 - 28230899
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    |||||||| |||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  28230954 tgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcc 28230899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 24400519 - 24400472
Alignment:
Q  45 gtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||| ||||| |||||||||||||||| |||||||||||| |||||||    
T  24400519 gtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 24400472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 26896033 - 26896080
Alignment:
Q  37 tagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccac 84  Q
    |||||||||||| ||||| |||| ||||||||||| ||||||||||||    
T  26896033 tagcaagtgtaccaaatactatcaaagtagtaaaaatatcgttcccac 26896080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 3826681 - 3826731
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttg 144  Q
    |||||||||||||||||||||||| | | | ||||||||||||||| ||||    
T  3826681 gttaatatttaggatgtgtaaattttataagtgcctgaggcagtaggtttg 3826731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 11125472 - 11125526
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgt 93  Q
    |||||||||  ||| |||||||||||||||||| |||| ||||||| ||||||||    
T  11125472 gcaagtgtatcaaaaattatcgaagtagtaaaaatatcattcccacaaggactgt 11125526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 23008323 - 23008289
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcc 128  Q
    ||||||||||||||||||||||||||||| |||||    
T  23008323 gttaatatttaggatgtgtaaattattttgatgcc 23008289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 23780041 - 23780075
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcc 128  Q
    ||||||||||||||||||||||||||||| |||||    
T  23780041 gttaatatttaggatgtgtaaattattttgatgcc 23780075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 32110016 - 32109963
Alignment:
Q  40 caagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgt 93  Q
    ||||||||| ||| | |||||||||||||||| |||||| ||||| ||||||||    
T  32110016 caagtgtaccaaaaactatcgaagtagtaaaaatatcgtacccacaaggactgt 32109963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 5e-62; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 45286931 - 45287102
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaag 191  Q
    ||||||||||||||||||||||||  ||| |  |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45286931 gttaatatttaggatgtgtaaatttcttttagttgcccgaggcagtagttttggtttgcataaaattaaataaacagaaaataaagatagagttggaaag 45287030  T
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  45287031 aataagagagagatgagattaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 45287102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 45290342 - 45290513
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaag 191  Q
    ||||||||||||||||||||||||  ||| |  |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45290342 gttaatatttaggatgtgtaaatttcttttagttgcccgaggcagtagttttggtttgcataaaattaaataaacagaaaataaagatagagttggaaag 45290441  T
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  45290442 aataagagagagatgagattaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 45290513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 23224806 - 23224938
Alignment:
Q  131 aggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatcta 230  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||    
T  23224806 aggcagtagttttggtttgcataaaattaaataaacagaatgtaaagatagagttggaaagaatgagagagagatgagatcaggtctttcgaatcatcta 23224905  T
Q  231 tgttgccctaattggtatactgcacatattctt 263  Q
    |||| ||||||||||||||||||||||||||||    
T  23224906 tgttcccctaattggtatactgcacatattctt 23224938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 133 - 263
Target Start/End: Original strand, 37415326 - 37415456
Alignment:
Q  133 gcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatg 232  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  37415326 gcagtagttttggtttgcataaaattaaataaacagaatgtaaagatagagttggaaagaataagagagagatgagatcaggtctttcgaatcatctatg 37415425  T
Q  233 ttgccctaattggtatactgcacatattctt 263  Q
    || |||||||||||||||||||| |||||||    
T  37415426 ttcccctaattggtatactgcacctattctt 37415456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 23224675 - 23224749
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||    
T  23224675 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgctcccacgaggactgtgttaat 23224749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 6603800 - 6603726
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  6603800 tgatagatattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 6603726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 13449551 - 13449625
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||||    
T  13449551 tgatagatattttagcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactatgttaat 13449625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 44017640 - 44017702
Alignment:
Q  95 ttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaat 157  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44017640 ttaatatttaggatgtgtaaattattttagtgcctgaggcagtagttttggtttgcataaaat 44017702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 4543140 - 4543075
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  4543140 ttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 4543075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 13449692 - 13449807
Alignment:
Q  147 ttgcataaaattaaataaacagaatataaagatagagttggaaagaataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattgg 245  Q
    |||||||||||||||||||||||| ||||||||||  |||||||  | ||| |||| |||| || |||||||||||||||||| ||| | ||||||||||    
T  13449692 ttgcataaaattaaataaacagaaaataaagatagttttggaaaagacaaggagagagatgagaacaggtctttcgaatcatcgatggtcccctaattgg 13449791  T
Q  246 tatactgcacatattc 261  Q
    |||||||||| |||||    
T  13449792 tatactgcacctattc 13449807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 4547212 - 4547147
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  4547212 ttttagcaagtgtactaaatactatcgaagtagtaaaaatattgttcccacgaggactgtgttaat 4547147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 37415206 - 37415267
Alignment:
Q  38 agcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  37415206 agcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 37415267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 26136086 - 26136162
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  26136086 aaagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 26136162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 26144466 - 26144542
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  26144466 aaagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 26144542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 9132720 - 9132793
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||| |||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9132720 aagaataagagagagatgagtt-aggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 9132793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 10345350 - 10345276
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  10345350 aagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 10345276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 14683403 - 14683477
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  14683403 aagaataaaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattctt 14683477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 4547015 - 4546950
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  4547015 agagggatgagatcaggtctttcgaatcatctatgtttccctaattgatatactgcacctattctt 4546950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 4595977 - 4596042
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  4595977 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatacttcacatattctt 4596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 260
Target Start/End: Complemental strand, 16165999 - 16165833
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaag 191  Q
    |||||||| |||||||||||||||  ||||| |||| |||||||||| || ||| |||||||||  ||||||| ||||| |||| |||||  |||||||     
T  16165999 gttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagatt-ggtgtgcataaaaagtaaataa-cagaaaataa-gatagttttggaaaa 16165903  T
Q  192 aataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
     | ||| |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||    
T  16165902 gacaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 16165833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 20594409 - 20594344
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  20594409 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacgtattctt 20594344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 45286848 - 45286913
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||| |||||||    
T  45286848 ttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttccaacgaggactatgttaat 45286913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 261
Target Start/End: Original strand, 2441200 - 2441309
Alignment:
Q  151 ataaaattaaataaacagaatataaagatagagttggaaagaataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtata 249  Q
    |||||| ||||||| ||||| ||||||||||  ||||||| |||||| |||| |||| ||||||||||||||||||||| |||||  |||||||||||||    
T  2441200 ataaaagtaaataa-cagaaaataaagatagttttggaaa-aataaggagagagatgagatcaggtctttcgaatcatcgatgttctcctaattggtata 2441297  T
Q  250 ctgcacatattc 261  Q
    |||||| |||||    
T  2441298 ctgcacctattc 2441309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 8277339 - 8277265
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| ||||| |||||||||| ||||| |||||||||||||||| ||||||| |||||||||||||||||||    
T  8277339 ctgataga-attttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttaccacgaggactgtgttaat 8277265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 5242066 - 5242180
Alignment:
Q  147 ttgcataaaattaaataaacagaatataaagatagagttggaaagaataa-gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattgg 245  Q
    ||||| ||||||||||||||| || ||||||||||  |||| || ||||| ||||| |||| |||||||||||||||||| |||  ||| || |||||||    
T  5242066 ttgcacaaaattaaataaacataaaataaagatagttttggcaaaaataaagagagagatgagatcaggtctttcgaatcttctgagttcccttaattgg 5242165  T
Q  246 tatactgcacatatt 260  Q
    |||||||||| ||||    
T  5242166 tatactgcacctatt 5242180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 16166090 - 16166017
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| |||| |||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  16166090 tgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactgtgttaat 16166017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 20080677 - 20080751
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||| |||| | | | ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  20080677 aagaataagagagagatgagtttaagtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 20080751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 4542943 - 4542878
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||    
T  4542943 agagagatgagatcaggtcttccgaatcatctatgttcccctaattggtatactgcacctattctt 4542878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 6603708 - 6603542
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| |||||||||||||||  ||||| || | ||||||||||||||| || ||||||| |||||||| ||||| |||| |||||  |||||||      
T  6603708 gttaatatctaggatgtgtaaatttcttttagtgtccgaggcagtagttttgatt-gcataaatttaaataa-cagaaaataa-gatagttttggaaaag 6603612  T
Q  193 ataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    | ||| | |  |||| ||||| ||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  6603611 acaaggacaaagatgagatcaagtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 6603542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 11919833 - 11919898
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  11919833 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactacacctattctt 11919898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 17730960 - 17730895
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  17730960 agagagatgagatcatgtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 17730895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 26557645 - 26557580
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  26557645 agagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactgcacctattctt 26557580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 45290259 - 45290324
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||||||| ||||||||| |||||||    
T  45290259 ttttagcaagtgtactaaatactatcgtagtagtaaaaatatcgttccaacgaggactatgttaat 45290324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 13842795 - 13842723
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    ||||||||||||| |||| ||||||||||||||||||||| || || || ||||||||||||||||| |||||    
T  13842795 aagaataagagagagatgagatcaggtctttcgaatcatcgatattcccgtaattggtatactgcacctattc 13842723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 37166105 - 37166181
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||| ||||   | |||||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  37166105 aaagaataagagagagatgaatttaggtctttcgaatcatttatgttcccctaattggtatactgcacctattcttg 37166181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 3067936 - 3068011
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||  ||| | | ||||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  3067936 aagaataagagagacatgagtttaggtctttcgaatcatctatgttcccctaattgttatactgcacctattcttg 3068011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 11919623 - 11919700
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagt---aaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||| ||||||||| ||||||||||||   |||| ||| ||||||||||||||||| |||||    
T  11919623 tgatagatattttagcaagtctactaaatactatcgaagtagtaaaaaaaatatagttcccacgaggactgtattaat 11919700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 263
Target Start/End: Complemental strand, 48645724 - 48645555
Alignment:
Q  97 aatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgc-----ataaaattaaataaacagaatataaagatagagttggaaag 191  Q
    |||||||||||||| |||| |||||| |||||||||||||| | |||| ||||      |||||| ||||||| ||||| |||||||||   |||||||     
T  48645724 aatatttaggatgtataaaatattttgatgcctgaggcagttgatttgatttgattgcaataaaagtaaataa-cagaaaataaagatatgtttggaaaa 48645626  T
Q  192 aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
     ||| | ||| |||| ||  || |||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  48645625 tatatg-gagagatgagactagatctttcgaatcatcgatgttcccctaattggtatactgcacctattctt 48645555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 13842983 - 13842918
Alignment:
Q  26 gatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    ||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||||| |||||||    
T  13842983 gatagatattttagcaagtgtaccaaa-actatcgaagtagtaaaaatatcgttcccacaaggactg 13842918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 8277132 - 8277067
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||||||||||||||| |||||||||| |||||||||||||| ||||| |||||||    
T  8277132 agagagatgagatcaggtctttcgaagcatctatgttcccctaattggtataatgcacctattctt 8277067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 4695614 - 4695562
Alignment:
Q  211 caggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  4695614 caggtctttcgaatcatctatattcccctaattggtatactgcacctattctt 4695562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 44017561 - 44017621
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||| ||  | |||||||||||||||| |||||||||||||||||||||||||||    
T  44017561 gcaagtgtaccaataactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 44017621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 10469299 - 10469224
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | || |||||||||||||||||||| |||||||| ||| ||||||| ||||||||    
T  10469299 aagaataagagagagatgagtttagatctttcgaatcatctatgttcccctaattagtacactgcacctattcttg 10469224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 9271433 - 9271498
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| || ||||| ||| |||||||||||||| |||||||||||||||||||| |||||||    
T  9271433 agagagatgagaacaggtatttagaatcatctatgttcccctaattggtatactgcacctattctt 9271498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 9864694 - 9864757
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    |||| |||| ||||||||||||| ||||||||||||  |||||||||||||||| ||| |||||    
T  9864694 agagagatgagatcaggtctttcaaatcatctatgtatccctaattggtatactacacctattc 9864757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 35961219 - 35961172
Alignment:
Q  216 ctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||||    
T  35961219 ctttcgaatcatctatgttcctctaattggtatactgcacctattctt 35961172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 2441049 - 2441116
Alignment:
Q  25 tgatagatatttt-agcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||| ||||||||||||||||||||        |||||| |||||||||||||||||||||||||||    
T  2441049 tgatagatatttttagcaagtgtactaaatatta--------gtaaaaatatcgttcccacgaggactgtgttaat 2441116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 26135897 - 26135954
Alignment:
Q  23 cctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    ||||||||| ||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  26135897 cctgataga-attttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcc 26135954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 11397915 - 11398080
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| ||||||||||||||| | ||| |||| ||||||||||  | ||| |||||||||  ||||||| ||||| |||| |||||  |||||||      
T  11397915 gttaatatctaggatgtgtaaatt-tcttagtgcccgaggcagtaggat-ggtgtgcataaaaagtaaataa-cagaaaataa-gatagttttggaaaag 11398010  T
Q  193 ataa-gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    | || ||||| |||| ||| ||||||||||| ||||| ||||| ||||||||||||||||| || |||||    
T  11398011 acaatgagagagatgagattaggtctttcgattcatcgatgttcccctaattggtatactgtacctattc 11398080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 20080499 - 20080544
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccac 84  Q
    |||||||||| ||||| |||||||||||||||| ||||||||||||    
T  20080499 gcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccac 20080544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 22232395 - 22232470
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagta--tcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||  |  ||||  |||||||||||||||||||    
T  22232395 tgatagatattttagcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaat 22232470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 22254344 - 22254269
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagta--tcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||  |  ||||  |||||||||||||||||||    
T  22254344 tgatagatattttagcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaat 22254269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 9132544 - 9132596
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggact 91  Q
    |||||||||| ||||| |||| ||||||||||| |||||||||||| ||||||    
T  9132544 gcaagtgtaccaaatactatcaaagtagtaaaaatatcgttcccacaaggact 9132596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 18560817 - 18560857
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagta 65  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  18560817 tgatagatattttagcaagtgtactaaaaactatcgaagta 18560857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 37165917 - 37165983
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||| |||| |||||||||| ||||| |||||||||||||||| ||||||| |||  |||||||    
T  37165917 tgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgtttccataaggactg 37165983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 5826477 - 5826522
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaa 71  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||    
T  5826477 tgatagatattttagcaagtgtactaaa-actatcgaagtaataaaa 5826522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 5826570 - 5826620
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttg 144  Q
    |||||||| ||||||||||||||| ||| | ||||||||||||||| ||||    
T  5826570 gttaatatctaggatgtgtaaattttttaagtgcctgaggcagtaggtttg 5826620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 10469466 - 10469424
Alignment:
Q  50 aaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    ||||| |||||||||||||||| |||||||||||| |||||||    
T  10469466 aaatactatcgaagtagtaaaaatatcgttcccacaaggactg 10469424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 23467014 - 23467059
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaa 71  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||    
T  23467014 tgatagatattttagcaagtgtactaaa-actatcgaagtaataaaa 23467059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 3067759 - 3067808
Alignment:
Q  40 caagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgagga 89  Q
    ||||| ||| ||||| |||||||||||||||| |||||||||||| ||||    
T  3067759 caagtataccaaatactatcgaagtagtaaaaatatcgttcccacaagga 3067808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 14683223 - 14683276
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||||| |||||  ||||||||| ||||| |||||||||||| |||||||    
T  14683223 gcaagtgtaccaaataccatcgaagtactaaaaatatcgttcccacaaggactg 14683276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 37415168 - 37415205
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaa 62  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  37415168 tgatagatattctagcaagtgtactaaatactatcgaa 37415205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 97 - 263
Target Start/End: Original strand, 5261 - 5426
Alignment:
Q  97 aatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgg-aaagaata 195  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||| ||||||||    
T  5261 aatatttaggatgtataaattattttagtgcctgaggcagtagttttggtttgcataaaattaaataaacaaaatataaagatagttttggaaaagaata 5360  T
Q  196 agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  5361 agaga--gatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 5426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 5166 - 5240
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| |||||||||||| ||||||||  ||||||||||||||| ||||||| |||||||||||||||||||    
T  5166 tgatagattttttagcaagtgcactaaataccatcgaagtagtaaaaatatcgttaccacgaggactgtgttaat 5240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 1e-59; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 25 - 263
Target Start/End: Complemental strand, 37215396 - 37215139
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat------------------atttagg 106  Q
    |||||||| ||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||                  |||||||    
T  37215396 tgatagattttttagcaagtgtactaaatactgtcgaagtagtaaaaatatcgttcccacgaggactgtgttaatctcaataataacgtaaatatttagg 37215297  T
Q  107 atgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagaggga 204  Q
    |||||||||||  ||| |  ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  37215296 atgtgtaaatttcttttagttgccctaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagaga 37215197  T
Q  205 tgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||  || ||||||||||||||||||| ||| |||||||||||||| ||||| |||||||    
T  37215196 tgaaattaggtctttcgaatcatctaagtt-ccctaattggtatattgcacctattctt 37215139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 94 - 255
Target Start/End: Original strand, 26752560 - 26752721
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| || ||||||||||||  ||||| |||| |||| ||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  26752560 gttaatatctaagatgtgtaaatttcttttagtgcccgaggtagtggttttgatt-gcataaaattaaataaacagaatataaagatagagttggaaaga 26752658  T
Q  193 ataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcac 255  Q
    ||||||||| |||| |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  26752659 ataagagagagatgagatcaggtctttcgaatcatttatgttcccctaattggtatactgcac 26752721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 136 - 263
Target Start/End: Complemental strand, 31863936 - 31863809
Alignment:
Q  136 gtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttg 235  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||     
T  31863936 gtagttttggtttgcataaaattaaataaacataatataaagatagagttggaaagaataagagagagatgagactaggtctttcgaatcatctatgttc 31863837  T
Q  236 ccctaattggtatactgcacatattctt 263  Q
    ||||||||| |||||||||| |||||||    
T  31863836 ccctaattgatatactgcacctattctt 31863809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 32838142 - 32838007
Alignment:
Q  94 gttaatatttaggatgtgtaaattatt---ttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgg-aa 189  Q
    |||||||||||||||||||||||||||   ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||  |||| ||    
T  32838142 gttaatatttaggatgtgtaaattattattttagtgcctgaagcagtagttttggtttgcataaaattaaataaacagaatataaatatagttttggaaa 32838043  T
Q  190 agaataagagagggatgcgatcaggtctttcgaatcat 227  Q
    |||||||||||  |||| ||||||||||||||||||||    
T  32838042 agaataagaga--gatgagatcaggtctttcgaatcat 32838007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 260
Target Start/End: Original strand, 41306388 - 41306552
Alignment:
Q  97 aatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaata 195  Q
    ||||||||||||||| |||||  ||||| ||| ||||||||||| || ||||||||||||||||||||||||||| |||||||||   |||||||  |||    
T  41306388 aatatttaggatgtgaaaatttcttttagtgcgtgaggcagtaggtt-ggtttgcataaaattaaataaacagaaaataaagataattttggaaaagata 41306486  T
Q  196 a-gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    | ||||| |||  |||| |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  41306487 aagagagagataagatcgggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 41306552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 43492017 - 43491859
Alignment:
Q  97 aatatttaggatgtgtaaattattttaat-gcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaa-gaat 194  Q
    |||||||||||||| |||||||||||  | |||  || ||||||||||| || ||||||||||||||||| |||| ||||||||||  ||||||| ||||    
T  43492017 aatatttaggatgtataaattattttgtttgccctagacagtagttttgatt-gcataaaattaaataaatagaaaataaagatagttttggaaaagaat 43491919  T
Q  195 aagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgca 254  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  43491918 aagagagagatgagatcaggtctttcgaatcatctatgttcccctaatcggtatattgca 43491859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 22936707 - 22936781
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  22936707 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 22936781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 94 - 231
Target Start/End: Original strand, 40916016 - 40916155
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    ||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||| ||| |||||||||   |||||||  |    
T  40916016 gttaatatttaggatgtgtaaattattttaatgccggagacaatagttttggtttgcataaaattaaataaac-gaaaataaagataattttggaaaaga 40916114  T
Q  194 ta---agagagggatgcgatcaggtctttcgaatcatctat 231  Q
    ||   |||||| |||| ||||||||||||| | ||||||||    
T  40916115 taaagagagagagatgagatcaggtctttcaagtcatctat 40916155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 263
Target Start/End: Original strand, 21332596 - 21332708
Alignment:
Q  151 ataaaattaaataaacagaatataaagatagagttggaaag-aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtata 249  Q
    |||||| ||||||| ||||| ||||||||||  |||||||| |||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  21332596 ataaaagtaaataa-cagaaaataaagatagttttggaaaggaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtata 21332694  T
Q  250 ctgcacatattctt 263  Q
    |||||| |||||||    
T  21332695 ctgcacctattctt 21332708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 41876521 - 41876595
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  41876521 tgatagattttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 41876595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 41306292 - 41306367
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  41306292 ctgatagattttttagcaagtgcactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 41306367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 14015998 - 14016164
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| |||||||||||||||  ||||| |||| ||||||||||||||| || ||||||| |||||||| ||||| |||| |||||  |||||||      
T  14015998 gttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-gcataaatttaaataa-cagaaaataa-gatagttttggaaaag 14016094  T
Q  193 ataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    | ||| |||| |||| ||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||    
T  14016095 acaaggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatagtgcacctattc 14016164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 28441314 - 28441419
Alignment:
Q  97 aatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgg-aaagaata 195  Q
    |||||||||||||| |||| |||||| ||||| |||| ||| | |||| ||||||||||||||||||||||||||||||| ||||  |||| ||||||||    
T  28441314 aatatttaggatgtataaaatattttgatgcccgagggagttgatttgatttgcataaaattaaataaacagaatataaatatagttttggaaaagaata 28441413  T
Q  196 agagag 201  Q
    ||||||    
T  28441414 agagag 28441419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 264
Target Start/End: Original strand, 12058445 - 12058521
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  12058445 aaagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 12058521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 18952862 - 18952787
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||||||| |||| |||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  18952862 aaagaataagagagagatgagatcaaatctttcaaatcatctatgttcccctaattggtatactgcacatattctt 18952787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 20055943 - 20055868
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||  ||| ||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  20055943 aaagaataagagagatatgagatgaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 20055868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 31864072 - 31863997
Alignment:
Q  25 tgatagatatttt-agcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||||||| |||||||||||||||||||| ||||||    
T  31864072 tgatagatatttttagcaagtgtactaaatactattgaagtagtaaaaatatcgttcccacgaggactgagttaat 31863997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 42063288 - 42063211
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatat--tatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||| ||||||||||||||||||| ||  |||||||||||||||| ||||||||||||||||||| |||||||    
T  42063288 ctgatagattttttagcaagtgtactaaaaatactatcgaagtagtaaaaatatcgttcccacgaggactatgttaat 42063211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 26752477 - 26752542
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||||||||||    
T  26752477 ttttagcaagtgtactaaatactatcgaagtagtaaaaatatcgtccccacgagtactgtgttaat 26752542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 26895559 - 26895632
Alignment:
Q  190 agaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||  ||||| |||||||    
T  26895559 agaataagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatgttgcacctattctt 26895632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 33552280 - 33552215
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  33552280 agagtgatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 33552215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 41876727 - 41876792
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  41876727 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 41876792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 30066463 - 30066403
Alignment:
Q  203 gatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  30066463 gatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 30066403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 7271165 - 7271110
Alignment:
Q  208 gatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  7271165 gatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 7271110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 12088126 - 12088051
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||| |||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  12088126 aagactaagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 12088051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 23044311 - 23044236
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||||||| |||| | | |||||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  23044311 aaagaataagagagagatgagtttaggtcttttgaatcatctatgttcccctaattggtatactgcacctattctt 23044236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 32838235 - 32838160
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatat-tatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||| |||||||||||||||||||||| || |||||||||| ||||| ||||||| |||||||||||||||||||    
T  32838235 tgataaatattttagcaagtgtactaaaaatgtatcgaagtaataaaaatatcgtttccacgaggactgtgttaat 32838160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 34132937 - 34133012
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||| |||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  34132937 aagactaagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 34133012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 34143168 - 34143243
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||| |||||||| |||| | | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  34143168 aagactaagagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 34143243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 43492113 - 43492038
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||  ||||||||| ||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||    
T  43492113 ctgatagaatttttagcaaatgtactaaatactatcgaagtagtaaaaatatcgttcccacaaggaccgtgttaat 43492038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 14015906 - 14015980
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| |||| |||||||||| ||||  |||||||||||||||| ||||||| |||||||||||||||||||    
T  14015906 tgatagattttttggcaagtgtaccaaatcctatcgaagtagtaaaaatatcgtttccacgaggactgtgttaat 14015980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 260
Target Start/End: Complemental strand, 7625366 - 7625200
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaag 191  Q
    |||||||| |||||||||||||||  ||||| |||| ||||||||||||||| || ||||||||  ||||||| ||||| |||| |||||  |||||||     
T  7625366 gttaatatctaggatgtgtaaatttcttttagtgcccgaggcagtagttttgatt-gcataaaaagtaaataa-cagaaaataa-gatagttttggaaaa 7625270  T
Q  192 aataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
     | ||| |||| |||| ||||||||||||| ||||||| ||||| |||||||||||||||| ||| ||||    
T  7625269 gacaaggagagagatgagatcaggtctttcaaatcatcgatgttcccctaattggtatactacacctatt 7625200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 10629471 - 10629407
Alignment:
Q  99 tatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataa 164  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||| | ||||||||||||||||||    
T  10629471 tatttaggatgtgtaaattattttaatgcctaaggcagtagattt-gattgcataaaattaaataa 10629407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 17664719 - 17664646
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattct 262  Q
    |||||||| |||| |||| |||||||||||| |||| ||||||||| |||||||||||||||||||| ||||||    
T  17664719 aagaataaaagagagatgagatcaggtcttttgaattatctatgttcccctaattggtatactgcacctattct 17664646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 263
Target Start/End: Original strand, 21335614 - 21335726
Alignment:
Q  151 ataaaattaaataaacagaatataaagatagagttggaaag-aataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtata 249  Q
    |||||| ||||||| || || ||||||||||  |||||||| |||||| ||| |||| || || ||||||||||||||||||||| |||||||| |||||    
T  21335614 ataaaagtaaataa-cataaaataaagatagttttggaaaggaataagcgagagatgagaccaagtctttcgaatcatctatgttcccctaatttgtata 21335712  T
Q  250 ctgcacatattctt 263  Q
    |||||| |||||||    
T  21335713 ctgcacctattctt 21335726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 22131390 - 22131326
Alignment:
Q  197 gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    ||||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  22131390 gagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 22131326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 4099494 - 4099545
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  4099494 aggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 4099545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 190
Target Start/End: Original strand, 18239375 - 18239461
Alignment:
Q  103 taggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaa 190  Q
    ||||||||||||||||||||  ||||| ||||||||| |||| || ||||||||| |||||||||||| ||||||||||  |||||||    
T  18239375 taggatgtgtaaattattttggtgcctaaggcagtagatttgatt-gcataaaatgaaataaacagaaaataaagatagttttggaaa 18239461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 26907432 - 26907483
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  26907432 aggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 26907483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 40915931 - 40915998
Alignment:
Q  32 tattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||||| |||||||||||||||| |||| |||||   ||||||||||||||    
T  40915931 tattttagcaagtgtactaaatactatcgaagtagtaaaaatatcattccctttaggactgtgttaat 40915998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 22936847 - 22936965
Alignment:
Q  147 ttgcataaaattaaataaacagaata-taaagatagagttggaaagaata-agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattg 244  Q
    |||||||||||||||||||||||| | |||||||||  |||||||  ||| |  ||| |||| ||  ||||||||||| ||||| ||||| |||||||||    
T  22936847 ttgcataaaattaaataaacagaaaaataaagatagttttggaaaatatatatggagagatgagactaggtctttcgagtcatcaatgttcccctaattg 22936946  T
Q  245 gtatactgcacatattctt 263  Q
    ||||||||||| |||||||    
T  22936947 gtatactgcacctattctt 22936965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 11959155 - 11959207
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  11959155 aggtctttcgaatcatctatgttcccctaattggtataccgcacctattcttg 11959207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 263
Target Start/End: Complemental strand, 42063127 - 42063016
Alignment:
Q  151 ataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatac 250  Q
    |||||| ||||||| ||||| ||||||||||  |||||||  |||   ||| |||| ||  |||||||| |||||||||||||| |||||||||||||||    
T  42063127 ataaaagtaaataa-cagaaaataaagatagttttggaaaatatatatgagagatgagactaggtcttttgaatcatctatgtttccctaattggtatac 42063029  T
Q  251 tgcacatattctt 263  Q
    ||||| |||||||    
T  42063028 tgcacctattctt 42063016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 14375715 - 14375820
Alignment:
Q  156 attaaataaacagaatataaagatagagttggaaagaata-agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgca 254  Q
    ||||||||||||||| ||||||||||  |||||||  ||| |  ||| |||| ||  ||||||||||| ||||| ||||| |||||||||||||||||||    
T  14375715 attaaataaacagaaaataaagatagttttggaaaatatatatggagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgca 14375814  T
Q  255 catatt 260  Q
    | ||||    
T  14375815 cctatt 14375820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 26907194 - 26907247
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||| |||||||    
T  26907194 gcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 26907247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 34832131 - 34832055
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatat-tatcgaagtagtaaaag-tatcgttcccacgaggactgtgttaat 99  Q
    ||||||||| |||||||||||||||||| |  |||||||||| |||||  |||||||||||| ||||||||||||||    
T  34832131 tgatagatactttagcaagtgtactaaaaacgtatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 34832055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 260
Target Start/End: Complemental strand, 17748608 - 17748537
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    ||||||||||||| |||| | | || |||| ||||||||||||||| ||||||||||||||| |||| ||||    
T  17748608 aagaataagagagagatgagtttagatcttccgaatcatctatgttcccctaattggtataccgcacctatt 17748537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 19686529 - 19686456
Alignment:
Q  27 atagatattttagcaagtgtactaaatattatcgaagtagtaaaagta--tcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||| | ||||||||||||||||  |  ||||  |||||||||||||||||||    
T  19686529 atagatattttagcaagtgtactaaa-actatcgaagtagtaaaataagttcgtatccacgaggactgtgttaat 19686456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 19689915 - 19689869
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaa 71  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||    
T  19689915 ctgatagatattttagcaagtgtactaaa-actatcgaagtagtaaaa 19689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 26292958 - 26292885
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||| |||| | | ||||||| ||||||||||||| | | |||||||||||||||||| |||||||    
T  26292958 aagaataagagagagatgagtttaggtctt-cgaatcatctatgctcctctaattggtatactgcacctattctt 26292885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 28562129 - 28562205
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaa--gtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||||||||||| | |||||||||| |||||  |  ||||  |||||||||||||||||||    
T  28562129 ctgatagatattttagcaagtgtactaaa-actatcgaagtaataaaataggttcgtatccacgaggactgtgttaat 28562205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 40583417 - 40583343
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||| |||| |||| | | |||||||||||||| || |||||  ||||||||||||||||||| |||||||    
T  40583417 aagaataaaagagagatgagtttaggtctttcgaatcctcgatgttctcctaattggtatactgcacctattctt 40583343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 17664897 - 17664844
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||| ||||| |||||||||||||||||||||| |||||||| ||| |||||||    
T  17664897 gcaaatgtaccaaatattatcgaagtagtaaaaatatcgttctcacaaggactg 17664844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 23044487 - 23044434
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||  |||||||    
T  23044487 gcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccataaggactg 23044434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 26548441 - 26548366
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagta--tcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||  |  ||||  |||||||||||||||||||    
T  26548441 tgatagatattttagcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaat 26548366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 26552000 - 26551925
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagta--tcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||  |  ||||  |||||||||||||||||||    
T  26552000 tgatagatattttagcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaat 26551925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 28565698 - 28565773
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaa--gtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||  |  ||||  |||||||||||||||||||    
T  28565698 tgatagatattttagcaagtgtactaaa-actatcgaagtaataaaataggttcgtatccacgaggactgtgttaat 28565773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 35049762 - 35049815
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||||| ||||| |||||||||||||||| |||||||||||  |||||||    
T  35049762 gcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccataaggactg 35049815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 39192489 - 39192424
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||||| |||||||||||||| ||||| ||||||||| |||| ||||| |||||||    
T  39192489 agagagatgagatcagatctttcgaatcatcaatgttcccctaattgatataatgcacgtattctt 39192424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 12088307 - 12088259
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  12088307 attttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcc 12088259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 34132756 - 34132804
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  34132756 attttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcc 34132804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 34142987 - 34143035
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  34142987 attttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcc 34143035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 34652524 - 34652570
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaa 71  Q
    ||||||||||||||||||||||||||||| | |||||||||| |||||    
T  34652524 ctgatagatattttagcaagtgtactaaa-actatcgaagtaataaaa 34652570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 34831923 - 34831858
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||| |||||||||||||| |||  ||| |||||||||||||| ||||| |||||||    
T  34831923 agagagatgagattaggtctttcgaatcttctgagttcccctaattggtataatgcacctattctt 34831858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 131 - 263
Target Start/End: Original strand, 3684 - 3816
Alignment:
Q  131 aggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatcta 230  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  3684 aggcagtagttttggtttgcataaaattaaataaacagaatgtaaagatagagttggaaagaataagagagagatgagatcaggtctttcgaatcatcta 3783  T
Q  231 tgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||||||||||||||||||| |||||||    
T  3784 tgttaccctaattggtatactgcacctattctt 3816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 3554 - 3627
Alignment:
Q  26 gatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||||||||||||||||||| ||| |||||| ||||| |||||||| ||||||||||||||||||    
T  3554 gatagatattttagcaagtgtactaaatactattgaagtaataaaaatatcgttctcacgaggactgtgttaat 3627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 97 - 263
Target Start/End: Complemental strand, 444 - 279
Alignment:
Q  97 aatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttgg-aaagaata 195  Q
    |||||||| |||||  ||| |||||| ||||| |||||||| | |||| ||||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  444 aatatttaagatgtaaaaaatattttgatgcccgaggcagttgatttgatttgcataaaattaaataaacagaatataaagatagttttggaaaagaata 345  T
Q  196 agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||  || | |||||| |||||||||||||||||||| |||||||||||||||||||| |||||||    
T  344 agaga--gacgagatcagatctttcgaatcatctatgttcccctaattggtatactgcacctattctt 279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 530 - 465
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||| |||||||| |||||||||||||||| ||||||||||||||| |||||||||||    
T  530 ttttagcaagtgcactaaatactatcgaagtagtaaaaatatcgttcccacgagaactgtgttaat 465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 19660 - 19490
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaa 190  Q
    |||||||||||||||| |||||||  ||| |  ||||  ||||||||||||||||||||||||||  ||||||| ||||| |||| ||||||||||||||    
T  19660 gttaatatttaggatgcgtaaatttcttttagttgccctaggcagtagttttggtttgcataaaaagtaaataa-cagaaaataa-gatagagttggaaa 19563  T
Q  191 gaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||||| |||| ||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  19562 gaatgagagagagatgagatcaggtctttcgaatcatctatgttcctctaattggtatactgcacctattctt 19490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 19752 - 19678
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  19752 tgatagatattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 19678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2073 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 724 - 895
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaagaa 193  Q
    |||||||| ||||||||||||||||||||| |||  |||||||||||||| | ||||||||||||||||||| |||| |||||| |||  |||||||  |    
T  724 gttaatatctaggatgtgtaaattattttagtgctcgaggcagtagtttt-gattgcataaaattaaataaatagaaaataaaggtagttttggaaaaga 822  T
Q  194 ta---agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||   |||||  ||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  823 taaggagagatagatgatatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 395 - 225
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaa--tgcctgaggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaa 190  Q
    |||||||| |||||||||||||||  ||| |  ||||  ||||||||||||||||||| ||||||  ||||||| ||||| |||| ||||||||||||||    
T  395 gttaatatctaggatgtgtaaatttcttttagttgccctaggcagtagttttggtttgtataaaaagtaaataa-cagaaaataa-gatagagttggaaa 298  T
Q  191 gaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||||| |||| ||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  297 gaatgagagagagatgagatcaagtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 491 - 413
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaag----tatcgttcccacgaggactgtgttaat 99  Q
    ||||||||||||| |||||||||| ||||| ||| ||||||||||||     |||||||||||||||||||||||||||    
T  491 tgatagatattttggcaagtgtaccaaatactattgaagtagtaaaaaaaaatatcgttcccacgaggactgtgttaat 413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 3048 - 3122
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  3048 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgttcccacgaggactgtgttaat 3122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 3194 - 3310
Alignment:
Q  147 ttgcataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggt 246  Q
    |||||||||||||||||||||||| ||||||||||  |||||||  |||   ||| |||| ||  ||||||||||| ||||| ||||| || ||||||||    
T  3194 ttgcataaaattaaataaacagaaaataaagatagttttggaaaatatatatgagagatgagactaggtctttcgagtcatcaatgttcccataattggt 3293  T
Q  247 atactgcacatattctt 263  Q
    ||| ||||| |||||||    
T  3294 ataatgcacctattctt 3310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 293374 - 293300
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  293374 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatattgttcccacgaggactgtgttaat 293300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 293226 - 293117
Alignment:
Q  155 aattaaataaacagaatataaagatagagttggaaagaataa-gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgc 253  Q
    |||||||||||||||| |||||||||   |||||||  |||| ||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  293226 aattaaataaacagaaaataaagataattttggaaaagataaagagagagatgagatcaagtctttcgaatcatctatgttcccctaattggtatactgc 293127  T
Q  254 acatattctt 263  Q
    || |||||||    
T  293126 acctattctt 293117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 97 - 263
Target Start/End: Original strand, 7573 - 7740
Alignment:
Q  97 aatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaat-taaataaacagaatataaagatagagttggaaa-gaa 193  Q
    |||||||||||||| ||||||  ||||| |||| |||||||||| || ||| |||||||||  ||||||| ||||| ||||||||||  ||| ||| |||    
T  7573 aatatttaggatgtataaatttcttttagtgcccgaggcagtaggtt-ggtgtgcataaaaagtaaataa-cagaaaataaagatagttttgaaaaagaa 7670  T
Q  194 taagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    || ||||| |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  7671 taggagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattctt 7740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 7481 - 7552
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||   | ||||||| | |||||||||||||||    
T  7481 tgatagattttttagcaagtgtactaaatactatcgaagtagtaa---tgtcgttcctatgaggactgtgttaat 7552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1785 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 263
Target Start/End: Complemental strand, 109 - 1
Alignment:
Q  151 ataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatac 250  Q
    |||||| ||||||| ||||| ||||||||||  |||||||||| ||||||| ||   ||||||||||||||||||||||||||| |||||||||||||||    
T  109 ataaaagtaaataa-cagaaaataaagatagttttggaaagaaaaagagagaga---gatcaggtctttcgaatcatctatgttcccctaattggtatac 14  T
Q  251 tgcacatattctt 263  Q
    ||||| |||||||    
T  13 tgcacctattctt 1  T

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Target: scaffold1785; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 272 - 193
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaa----gtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||     |||| ||||||||||||||||||||||    
T  272 ctgatagattttttagcaagtgtactaaatactatcgaagtagtaaaaatatctatcattcccacgaggactgtgttaat 193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 59; Significance: 5e-25; HSPs: 4)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 263
Target Start/End: Complemental strand, 62719 - 62611
Alignment:
Q  151 ataaaattaaataaacagaatataaagatagagttggaaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatac 250  Q
    |||||| ||||||| ||||| ||||||||||  |||||||||| ||||||| ||   ||||||||||||||||||||||||||| |||||||||||||||    
T  62719 ataaaagtaaataa-cagaaaataaagatagttttggaaagaaaaagagagaga---gatcaggtctttcgaatcatctatgttcccctaattggtatac 62624  T
Q  251 tgcacatattctt 263  Q
    ||||| |||||||    
T  62623 tgcacctattctt 62611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 62882 - 62803
Alignment:
Q  24 ctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaa----gtatcgttcccacgaggactgtgttaat 99  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||     |||| ||||||||||||||||||||||    
T  62882 ctgatagattttttagcaagtgtactaaatactatcgaagtagtaaaaatatctatcattcccacgaggactgtgttaat 62803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 64026 - 63952
Alignment:
Q  190 agaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||| |||| | | ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  64026 agaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaatcggtatactgcacctattcttg 63952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 64205 - 64152
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||||| ||||| |||| ||||||||||| |||||||||||| |||||||    
T  64205 gcaagtgtaccaaatactatcaaagtagtaaaaatatcgttcccacaaggactg 64152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 90033 - 89866
Alignment:
Q  94 gttaatatttaggatgtgtaaatta-ttttaatgcctgaggcagtagttttggtttgcataaaattaaataaacagaatataaagatagagttggaaaga 192  Q
    |||||||| |||||||||||||||  ||||| ||||||||||||||| || ||| |||||||||   ||  ||||||| |||| |||||  |||||||      
T  90033 gttaatatctaggatgtgtaaatttgttttagtgcctgaggcagtaggtt-ggtgtgcataaaaagcaaataacagaaaataa-gatagttttggaaaac 89936  T
Q  193 ataag-agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    | ||| |||| |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  89935 acaaggagagagatgagatcaggtctttcgaatcatctaagttcccctaattggtatactgcacatattc 89866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1755 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1755
Description:

Target: scaffold1755; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 280 - 215
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  280 agagagatgagatcaggtctttcgaatcatatatgttcccctaattggtatactgcacatattctt 215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 198306 - 198241
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  198306 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 198241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 248677 - 248612
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  248677 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 248612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 92781 - 92723
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgtta 97  Q
    |||||||||| ||  | |||||||||||||||| |||||||||||||||||||||||||    
T  92781 gcaagtgtaccaataactatcgaagtagtaaaaatatcgttcccacgaggactgtgtta 92723  T

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Target: scaffold0048 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 15581 - 15505
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    |||||||||||||| |||| | | ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||    
T  15581 aaagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaattgggatactgcacctattcttg 15505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 15770 - 15713
Alignment:
Q  23 cctgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    |||||||||| |||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  15770 cctgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcc 15713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 14273 - 14344
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||||||| |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||    
T  14273 aagaataaaagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 14344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 57542 - 57617
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||  | ||||||||||| ||||| |||||||    
T  57542 aaagaataagagagagatgagatcaggtctttcgaatcatctatgttcacataattggtatattgcacctattctt 57617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 27268 - 27203
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  27268 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattctt 27203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 2982 - 3034
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  2982 aggtctttcgaatcatctatgttcccctaattggtatactgcacctattcttg 3034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 44; Significance: 4e-16; HSPs: 4)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 19448 - 19373
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | |||||||||||||||||||||||  ||| ||||||||||||||| ||||||||    
T  19448 aagaataagagagagatgagtttaggtctttcgaatcatctatgttcacctcattggtatactgcacctattcttg 19373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 29533 - 29458
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| | | ||||||||||||||||||||||| ||||||||  |||||||||| ||||||||    
T  29533 aagaataagagagagatgagtttaggtctttcgaatcatctatgttcccctaatttttatactgcacctattcttg 29458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 19636 - 19571
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||| |||| |||||||||| ||| | |||||||||||||||| |||||||||||| |||||||    
T  19636 tgatagat-ttttggcaagtgtaccaaa-actatcgaagtagtaaaaatatcgttcccacaaggactg 19571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 29715 - 29651
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggact 91  Q
    |||||||| |||| |||||||||| ||| | |||||||||||||||| |||||||||||| ||||||    
T  29715 tgatagat-ttttggcaagtgtaccaaa-actatcgaagtagtaaaaatatcgttcccacaaggact 29651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 25 - 89
Alignment:
Q  197 gagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattc 261  Q
    ||||| |||| ||||||||||||||||||||| ||||| || ||||||||||||||||| |||||    
T  25 gagagagatgagatcaggtctttcgaatcatcgatgttcccttaattggtatactgcacctattc 89  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 4061 - 4009
Alignment:
Q  212 aggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  4061 aggtctttcgaatcatctatgtttctctaattggtatactgcacctattcttg 4009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 4260 - 4207
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    |||||||||| ||||| |||||||||||||||| ||| |||||||| |||||||    
T  4260 gcaagtgtaccaaatactatcgaagtagtaaaattattgttcccacaaggactg 4207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 260
Target Start/End: Complemental strand, 241649 - 241597
Alignment:
Q  208 gatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatatt 260  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||| ||||    
T  241649 gatcagatctttcgaatcatctatgttcccctaattggtatactgcacctatt 241597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 8192 - 8247
Alignment:
Q  208 gatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||||||||||||||||||| |||||| |||||||||||||||| ||| |||||||    
T  8192 gatcaggtctttcgaatcatttatgtttccctaattggtatactacacctattctt 8247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Complemental strand, 10577 - 10502
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||| |||| |   |||| |||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  10577 aagaataagagagagatgagtctaggtatttcgaatcatcgatgttcccctaattggtatactgcacctattcttg 10502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 10757 - 10698
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactg 92  Q
    ||||| |||||||||| ||||| |||||||||||||||| ||  |||||||| |||||||    
T  10757 attttggcaagtgtaccaaatactatcgaagtagtaaaaataatgttcccacaaggactg 10698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 264
Target Start/End: Original strand, 58635 - 58710
Alignment:
Q  189 aagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattcttg 264  Q
    ||||||||||||  |||| | | || |||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  58635 aagaataagagatagatgagtttagatctttcgaatcatctatgttcccctaatttgtatactgcacctattcttg 58710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 58460 - 58518
Alignment:
Q  41 aagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgtgttaat 99  Q
    |||||||| ||||| |||||||||||||||| |||||||||||  |||||||| |||||    
T  58460 aagtgtaccaaatactatcgaagtagtaaaaatatcgttcccaaaaggactgttttaat 58518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 224 - 171
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatact 251  Q
    |||| |||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  224 agagagatgagatcaggtctttcgaatcatatatgttcccctaattggtatact 171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 2712 - 2595
Alignment:
Q  147 ttgcataaaattaaataaacagaatataaagatagagttggaaagaata-agagagggatgcgatcaggtctttcgaatcatctatgttgccctaattgg 245  Q
    ||||| |||||||||||||||||| ||||| ||||  || ||||  ||| |  ||| |||| ||  ||||||||||| ||||| ||||| ||||||||||    
T  2712 ttgcacaaaattaaataaacagaaaataaaaatagtattagaaaatatatatggagagatgagactaggtctttcgagtcatcaatgttcccctaattgg 2613  T
Q  246 tatactgcacatattctt 263  Q
    |||||||||| |||||||    
T  2612 tatactgcacctattctt 2595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 5511 - 5446
Alignment:
Q  198 agagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    |||| |||| |||||||||||||||||||||||| || ||||||||| |||| ||||| |||||||    
T  5511 agagagatgagatcaggtctttcgaatcatctatattcccctaattgatatagtgcacctattctt 5446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 31264 - 31187
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccc-taattggtatactgcacatattcttg 264  Q
    ||||||||||| || |||| | | |||||||||||||||| |||||| ||| ||||||||||||||||| ||||||||    
T  31264 aaagaataagatagagatgagtttaggtctttcgaatcatttatgttacccctaattggtatactgcacctattcttg 31187  T

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Target: scaffold0038; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 31451 - 31396
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcc 81  Q
    |||||||| |||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  31451 tgatagat-ttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcc 31396  T

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Target: scaffold0996 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 1779 - 1829
Alignment:
Q  94 gttaatatttaggatgtgtaaattattttaatgcctgaggcagtagttttg 144  Q
    |||||||| ||||||||||||||||||||| |||| ||| |||||||||||    
T  1779 gttaatatctaggatgtgtaaattattttagtgcccgagccagtagttttg 1829  T

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Target: scaffold0056 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 65094 - 65154
Alignment:
Q  33 attttagcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccacgaggactgt 93  Q
    ||||| ||||||| || ||||| |||| ||||||||||| |||||||||||||| ||||||    
T  65094 attttggcaagtgaaccaaatactatccaagtagtaaaaatatcgttcccacgatgactgt 65154  T

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Target: scaffold0807 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 2026 - 2101
Alignment:
Q  188 aaagaataagagagggatgcgatcaggtctttcgaatcatctatgttgccctaattggtatactgcacatattctt 263  Q
    ||||||||||||||  ||| | | |||||||| ||||||||||||||  || |||||||||| ||||| |||||||    
T  2026 aaagaataagagagatatgagcttaggtctttagaatcatctatgttctccgaattggtatattgcacctattctt 2101  T

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Target: scaffold0807; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 1850 - 1895
Alignment:
Q  39 gcaagtgtactaaatattatcgaagtagtaaaagtatcgttcccac 84  Q
    |||||||||| ||||| ||||||||| |||||| ||||||||||||    
T  1850 gcaagtgtaccaaatactatcgaagtggtaaaaatatcgttcccac 1895  T

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Target: scaffold0737 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 7108 - 7184
Alignment:
Q  25 tgatagatattttagcaagtgtactaaatattatcgaagtagtaaaagta---tcgttcccacgaggactgtgttaat 99  Q
    |||||||||||||||||||||||||||| | |||||||||| ||||| ||   ||||  |||||||||| ||||||||    
T  7108 tgatagatattttagcaagtgtactaaa-actatcgaagtaataaaaataagttcgtatccacgaggacggtgttaat 7184  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 99007 - 99044
Alignment:
Q  34 ttttagcaagtgtactaaatattatcgaagtagtaaaa 71  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  99007 ttttagcaagtgtactaaaaattatcgaagtaataaaa 99044  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 118214 - 118289
Alignment:
Q  27 atagatattttagcaagtgtactaaatattatcgaagtagtaaaagta---tcgttcccacgaggactgtgttaat 99  Q
    |||||||||||| ||||||||||||| | |||||||||| ||||| ||   ||||  ||||||||| |||||||||    
T  118214 atagatattttaacaagtgtactaaaaactatcgaagtaataaaaataagttcgtatccacgaggattgtgttaat 118289  T

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