View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_185 (Length: 251)
Name: NF10233A_low_185
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_185 |
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Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 22 - 243
Target Start/End: Original strand, 20108560 - 20108781
Alignment:
| Q |
22 |
tcaaagaagagttaaataactagggttagttgagaaaaatataagcatgtacctatgctacaaaagatacattccagaatctaaaactcaataaaggcta |
121 |
Q |
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| T |
20108560 |
tcaaagaagagttaaataactagggttagttgagaaaaatataagcatgtacctatgctgcaaaagacacattccagaatctaaaactcaataaaggcta |
20108659 |
T |
|
| Q |
122 |
ttgtaacagcggtcgcaataaacatctcagcaatcgctgtgactgcaacctccctacaactgcaatctcaatttaaactttggtgtatctattttggaca |
221 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
20108660 |
ttgtaacagcggtcgcaataaacatctcagcaaccgctgtgactgcaaccttcctacaactgcaatcccaatttaaactttggtgtatctattttggaca |
20108759 |
T |
|
| Q |
222 |
tgaactccaacacgaaactcga |
243 |
Q |
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||||||| |||||||| ||||| |
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| T |
20108760 |
tgaactctaacacgaatctcga |
20108781 |
T |
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