View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_186 (Length: 251)
Name: NF10233A_low_186
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_186 |
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Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 21002676 - 21002915
Alignment:
| Q |
1 |
aaaacgcatttgaaactcccataattcctgtcaaacaaaatgtcacataaacaagacaattagaactacggtacaaatatcattaaaaataagaaaatga |
100 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
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| T |
21002676 |
aaaacgcatttgaaactcccataattcctgtcaaacataatgtcacataaacaaaatgattagaactacggtacaaatatcattaaaaataagaaaatga |
21002775 |
T |
|
| Q |
101 |
tttgaaaccaactgcaacaaaatctcacccatatatttacgttgcttgcaatgctgcattattaagatagctggtgttttagtgtcatgaccttcaatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
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| T |
21002776 |
tttgaaaccaactgcaacaaaatctcacccatatatttacgttgcttgcaatgctgaattattaagatagctggtgttttagtgtcatgaccttcatgat |
21002875 |
T |
|
| Q |
201 |
attgcaaaaacttatcggcatattcaccccacagcgaaca |
240 |
Q |
| |
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||||||||||||||||| |||||||||||||||||||||| |
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| T |
21002876 |
attgcaaaaacttatcgacatattcaccccacagcgaaca |
21002915 |
T |
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