View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10233A_low_192 (Length: 250)

Name: NF10233A_low_192
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10233A_low_192
NF10233A_low_192
[»] chr2 (61 HSPs)
chr2 (4-118)||(42665667-42665781)
chr2 (38-118)||(11442774-11442854)
chr2 (35-117)||(42554879-42554959)
chr2 (37-118)||(38912489-38912570)
chr2 (178-238)||(42665839-42665899)
chr2 (38-116)||(10389323-10389401)
chr2 (35-118)||(546271-546354)
chr2 (38-107)||(2308213-2308282)
chr2 (33-117)||(36763403-36763488)
chr2 (42-118)||(5167635-5167711)
chr2 (38-118)||(36909732-36909812)
chr2 (178-225)||(35965572-35965619)
chr2 (37-118)||(7497879-7497960)
chr2 (37-118)||(40496452-40496533)
chr2 (178-219)||(43650576-43650617)
chr2 (42-118)||(30856909-30856985)
chr2 (181-225)||(42251950-42251994)
chr2 (36-118)||(10550345-10550428)
chr2 (36-118)||(19913886-19913969)
chr2 (39-114)||(36795836-36795911)
chr2 (178-224)||(7498018-7498064)
chr2 (178-224)||(22390150-22390196)
chr2 (178-219)||(546412-546453)
chr2 (37-118)||(3091843-3091924)
chr2 (37-118)||(13711163-13711244)
chr2 (178-219)||(42554779-42554820)
chr2 (183-219)||(12193599-12193635)
chr2 (181-225)||(16447276-16447320)
chr2 (42-118)||(19668080-19668156)
chr2 (36-114)||(1574559-1574638)
chr2 (35-114)||(16051275-16051353)
chr2 (178-225)||(33296098-33296145)
chr2 (42-118)||(3959998-3960075)
chr2 (44-114)||(4723672-4723742)
chr2 (178-224)||(4738599-4738645)
chr2 (67-117)||(6666123-6666173)
chr2 (44-118)||(11164271-11164345)
chr2 (37-118)||(11828707-11828789)
chr2 (178-224)||(18373845-18373891)
chr2 (178-224)||(32749996-32750042)
chr2 (178-220)||(43665624-43665666)
chr2 (37-118)||(43791678-43791760)
chr2 (182-224)||(44189825-44189867)
chr2 (183-224)||(6666018-6666059)
chr2 (61-118)||(13881197-13881254)
chr2 (61-118)||(14021322-14021379)
chr2 (37-82)||(19637365-19637410)
chr2 (37-82)||(19835958-19836003)
chr2 (178-219)||(23345016-23345057)
chr2 (42-118)||(30413624-30413701)
chr2 (178-219)||(30974016-30974057)
chr2 (178-219)||(34249583-34249624)
chr2 (42-118)||(37631259-37631336)
chr2 (37-118)||(40951292-40951373)
chr2 (42-118)||(4842412-4842488)
chr2 (35-87)||(6511248-6511300)
chr2 (184-224)||(12877463-12877503)
chr2 (54-106)||(16447153-16447205)
chr2 (35-118)||(33295973-33296056)
chr2 (38-118)||(35965684-35965764)
chr2 (35-118)||(45515485-45515568)
[»] chr3 (83 HSPs)
chr3 (37-114)||(22153970-22154047)
chr3 (37-118)||(11233919-11234000)
chr3 (37-118)||(35425560-35425641)
chr3 (37-115)||(42424336-42424414)
chr3 (37-118)||(46473230-46473311)
chr3 (39-118)||(26668942-26669021)
chr3 (35-118)||(32795938-32796021)
chr3 (36-114)||(18713709-18713787)
chr3 (37-118)||(25959430-25959511)
chr3 (35-118)||(622345-622428)
chr3 (39-118)||(47509037-47509116)
chr3 (37-118)||(11173552-11173633)
chr3 (38-111)||(43176304-43176377)
chr3 (37-118)||(44593068-44593149)
chr3 (37-118)||(50294012-50294093)
chr3 (38-118)||(28300535-28300615)
chr3 (44-116)||(53133843-53133915)
chr3 (35-118)||(1901812-1901895)
chr3 (35-118)||(1911258-1911341)
chr3 (35-118)||(31326810-31326893)
chr3 (36-118)||(7231893-7231975)
chr3 (36-114)||(40159713-40159791)
chr3 (37-118)||(7867597-7867678)
chr3 (178-219)||(22153867-22153908)
chr3 (178-219)||(43900784-43900825)
chr3 (178-219)||(44334828-44334869)
chr3 (46-118)||(37323769-37323841)
chr3 (35-118)||(40785584-40785668)
chr3 (54-118)||(44334706-44334770)
chr3 (39-118)||(12094280-12094359)
chr3 (37-87)||(16479631-16479681)
chr3 (44-118)||(23920399-23920473)
chr3 (37-118)||(1295434-1295515)
chr3 (77-118)||(3484859-3484900)
chr3 (179-224)||(24748593-24748638)
chr3 (178-219)||(35425699-35425740)
chr3 (178-223)||(39540234-39540279)
chr3 (35-118)||(43169640-43169722)
chr3 (32-116)||(47683894-47683979)
chr3 (178-227)||(52727475-52727524)
chr3 (42-114)||(981576-981648)
chr3 (42-118)||(1031320-1031396)
chr3 (38-118)||(29706005-29706085)
chr3 (36-118)||(36869723-36869806)
chr3 (44-99)||(42104537-42104592)
chr3 (178-228)||(8066349-8066399)
chr3 (178-228)||(11335329-11335379)
chr3 (178-224)||(18169155-18169201)
chr3 (32-118)||(20380772-20380858)
chr3 (178-224)||(22813070-22813116)
chr3 (178-224)||(26279882-26279928)
chr3 (37-118)||(32687847-32687929)
chr3 (178-224)||(33007358-33007404)
chr3 (37-118)||(36799500-36799582)
chr3 (178-224)||(43333697-43333743)
chr3 (37-118)||(45295626-45295708)
chr3 (181-219)||(46315985-46316023)
chr3 (36-86)||(46953083-46953133)
chr3 (178-224)||(51410804-51410850)
chr3 (37-87)||(51973389-51973439)
chr3 (37-118)||(55344183-55344265)
chr3 (35-64)||(8317951-8317980)
chr3 (178-219)||(19418184-19418225)
chr3 (178-219)||(26669031-26669072)
chr3 (178-219)||(28300675-28300716)
chr3 (178-219)||(31017421-31017462)
chr3 (37-118)||(32981009-32981090)
chr3 (178-219)||(34733318-34733359)
chr3 (178-219)||(37303101-37303142)
chr3 (42-118)||(40478179-40478256)
chr3 (61-114)||(41369685-41369738)
chr3 (42-118)||(41877790-41877867)
chr3 (178-219)||(48649583-48649624)
chr3 (37-114)||(51032514-51032591)
chr3 (178-219)||(51464299-51464340)
chr3 (69-114)||(55196441-55196486)
chr3 (42-106)||(462294-462358)
chr3 (178-214)||(622487-622523)
chr3 (38-114)||(11335191-11335267)
chr3 (35-118)||(23906872-23906956)
chr3 (78-114)||(24748705-24748741)
chr3 (178-226)||(37303379-37303427)
chr3 (36-118)||(50025571-50025654)
[»] chr5 (65 HSPs)
chr5 (38-118)||(3722965-3723045)
chr5 (35-118)||(27340971-27341054)
chr5 (37-118)||(33743221-33743302)
chr5 (43-118)||(21062884-21062959)
chr5 (32-117)||(20125493-20125578)
chr5 (37-118)||(30301312-30301393)
chr5 (32-118)||(39595376-39595462)
chr5 (37-114)||(18638729-18638806)
chr5 (42-118)||(9636051-9636127)
chr5 (35-118)||(34952291-34952374)
chr5 (37-118)||(24792555-24792635)
chr5 (38-118)||(36624420-36624500)
chr5 (53-112)||(8725320-8725379)
chr5 (35-114)||(12878841-12878920)
chr5 (39-118)||(39840593-39840672)
chr5 (44-118)||(4878169-4878243)
chr5 (37-87)||(38731000-38731050)
chr5 (36-118)||(42825216-42825298)
chr5 (38-114)||(36415951-36416027)
chr5 (39-118)||(125194-125273)
chr5 (47-118)||(2456128-2456199)
chr5 (51-114)||(32425058-32425121)
chr5 (36-118)||(5698215-5698297)
chr5 (36-118)||(36581354-36581436)
chr5 (72-118)||(42807410-42807456)
chr5 (37-118)||(91317-91398)
chr5 (37-118)||(14914472-14914553)
chr5 (178-219)||(20125392-20125433)
chr5 (37-118)||(26626707-26626788)
chr5 (178-219)||(27340872-27340913)
chr5 (37-118)||(33567127-33567208)
chr5 (178-227)||(33743360-33743409)
chr5 (178-219)||(39840736-39840777)
chr5 (38-114)||(3155108-3155184)
chr5 (34-118)||(11306798-11306882)
chr5 (54-118)||(13734265-13734329)
chr5 (42-118)||(26627432-26627508)
chr5 (44-92)||(31708460-31708508)
chr5 (35-87)||(33037517-33037569)
chr5 (42-117)||(582762-582837)
chr5 (38-108)||(3141608-3141678)
chr5 (44-87)||(8787051-8787094)
chr5 (36-118)||(40566103-40566186)
chr5 (178-224)||(18638852-18638898)
chr5 (181-219)||(21062785-21062823)
chr5 (36-118)||(31024892-31024974)
chr5 (44-118)||(34381114-34381188)
chr5 (36-82)||(38387848-38387894)
chr5 (37-118)||(2117528-2117609)
chr5 (77-118)||(6865715-6865756)
chr5 (42-114)||(7077231-7077304)
chr5 (37-118)||(16292138-16292219)
chr5 (35-87)||(18695315-18695368)
chr5 (178-219)||(24431645-24431686)
chr5 (31-108)||(25038192-25038269)
chr5 (178-219)||(31329153-31329194)
chr5 (178-219)||(31708373-31708414)
chr5 (37-86)||(32732004-32732053)
chr5 (178-219)||(34381015-34381056)
chr5 (178-219)||(34952433-34952474)
chr5 (178-219)||(39595275-39595316)
chr5 (39-118)||(12612906-12612986)
chr5 (36-108)||(15639497-15639569)
chr5 (181-225)||(19376162-19376206)
chr5 (35-118)||(41460218-41460302)
[»] chr4 (88 HSPs)
chr4 (44-118)||(10096637-10096711)
chr4 (44-118)||(17363332-17363406)
chr4 (44-114)||(45274369-45274439)
chr4 (36-114)||(41154134-41154212)
chr4 (38-118)||(29525960-29526040)
chr4 (38-118)||(34114006-34114086)
chr4 (178-228)||(42516644-42516694)
chr4 (44-118)||(42516736-42516810)
chr4 (178-219)||(17363233-17363274)
chr4 (37-118)||(46567031-46567112)
chr4 (42-118)||(33438147-33438223)
chr4 (67-118)||(4514183-4514234)
chr4 (31-118)||(11063971-11064058)
chr4 (43-118)||(39067849-39067924)
chr4 (178-224)||(10096769-10096815)
chr4 (36-118)||(11012227-11012309)
chr4 (36-118)||(31275248-31275330)
chr4 (34-115)||(34259931-34260013)
chr4 (37-118)||(42882556-42882638)
chr4 (178-224)||(51296216-51296262)
chr4 (178-224)||(51397898-51397944)
chr4 (37-118)||(12638926-12639007)
chr4 (37-118)||(55510961-55511042)
chr4 (38-118)||(5234360-5234440)
chr4 (42-118)||(28676047-28676123)
chr4 (38-114)||(46081892-46081963)
chr4 (36-99)||(8906351-8906414)
chr4 (67-118)||(40308535-40308586)
chr4 (67-118)||(40335879-40335930)
chr4 (44-118)||(22071600-22071674)
chr4 (36-118)||(35332806-35332888)
chr4 (178-224)||(38844517-38844563)
chr4 (37-87)||(55609187-55609237)
chr4 (37-118)||(56025358-56025440)
chr4 (37-114)||(4489687-4489764)
chr4 (178-219)||(25139982-25140023)
chr4 (178-219)||(31147234-31147275)
chr4 (178-219)||(38961501-38961542)
chr4 (178-219)||(40335792-40335833)
chr4 (37-118)||(42915107-42915188)
chr4 (36-108)||(12241169-12241241)
chr4 (178-225)||(4896527-4896574)
chr4 (178-225)||(9162063-9162110)
chr4 (67-118)||(31147333-31147384)
chr4 (44-99)||(50159055-50159110)
chr4 (35-118)||(51389418-51389501)
chr4 (37-71)||(11997799-11997833)
chr4 (37-118)||(18874811-18874893)
chr4 (181-219)||(29525861-29525899)
chr4 (36-118)||(30778151-30778233)
chr4 (37-118)||(31240750-31240832)
chr4 (34-91)||(31804215-31804273)
chr4 (44-114)||(39880925-39880995)
chr4 (37-118)||(42510812-42510894)
chr4 (37-118)||(51224725-51224807)
chr4 (36-114)||(53356964-53357042)
chr4 (178-224)||(53583155-53583201)
chr4 (178-219)||(2812620-2812661)
chr4 (178-219)||(11064116-11064157)
chr4 (37-118)||(13267366-13267447)
chr4 (178-219)||(25725721-25725762)
chr4 (178-219)||(29384224-29384265)
chr4 (45-118)||(31658021-31658094)
chr4 (42-118)||(33860438-33860515)
chr4 (178-219)||(34116567-34116608)
chr4 (36-105)||(37977230-37977299)
chr4 (178-219)||(39881057-39881098)
chr4 (178-223)||(40308440-40308485)
chr4 (37-118)||(46173639-46173720)
chr4 (37-74)||(46686244-46686281)
chr4 (178-219)||(46794528-46794569)
chr4 (178-219)||(46911901-46911942)
chr4 (178-219)||(46912826-46912867)
chr4 (37-118)||(47998696-47998776)
chr4 (178-219)||(51389101-51389142)
chr4 (77-118)||(51397786-51397827)
chr4 (78-114)||(2812522-2812558)
chr4 (42-86)||(7795134-7795178)
chr4 (38-118)||(15596498-15596578)
chr4 (42-114)||(16508870-16508942)
chr4 (34-74)||(19315040-19315080)
chr4 (184-224)||(19899308-19899348)
chr4 (46-118)||(27384278-27384350)
chr4 (183-219)||(30973600-30973636)
chr4 (38-118)||(38844379-38844459)
chr4 (78-118)||(46912728-46912768)
chr4 (44-118)||(54036425-54036498)
chr4 (32-87)||(56025250-56025305)
[»] chr8 (52 HSPs)
chr8 (37-110)||(34996248-34996321)
chr8 (35-118)||(6005046-6005129)
chr8 (37-118)||(27631049-27631130)
chr8 (42-118)||(5782890-5782966)
chr8 (37-118)||(11155770-11155851)
chr8 (38-118)||(323969-324049)
chr8 (31-117)||(7129636-7129722)
chr8 (36-118)||(41304869-41304951)
chr8 (178-219)||(26871049-26871090)
chr8 (37-118)||(40413251-40413332)
chr8 (42-118)||(1796585-1796661)
chr8 (178-218)||(3756905-3756945)
chr8 (38-118)||(8074614-8074694)
chr8 (51-118)||(5642292-5642359)
chr8 (51-118)||(5644233-5644300)
chr8 (38-105)||(11180458-11180525)
chr8 (36-99)||(11789892-11789955)
chr8 (35-118)||(21273596-21273679)
chr8 (178-225)||(34996387-34996434)
chr8 (68-111)||(35594653-35594696)
chr8 (44-118)||(10653678-10653752)
chr8 (37-118)||(154392-154473)
chr8 (178-223)||(6105463-6105508)
chr8 (34-118)||(9000898-9000983)
chr8 (37-118)||(23258134-23258215)
chr8 (38-118)||(7678834-7678914)
chr8 (42-118)||(36740414-36740490)
chr8 (38-114)||(40719533-40719609)
chr8 (47-118)||(24503019-24503090)
chr8 (178-225)||(41305009-41305056)
chr8 (42-87)||(16699590-16699635)
chr8 (72-106)||(20052947-20052981)
chr8 (178-228)||(22852866-22852916)
chr8 (37-118)||(30925542-30925623)
chr8 (44-118)||(34810534-34810608)
chr8 (178-224)||(45101394-45101440)
chr8 (38-118)||(102344-102425)
chr8 (178-219)||(5642417-5642458)
chr8 (178-219)||(5644358-5644399)
chr8 (37-117)||(6849148-6849229)
chr8 (178-219)||(7596918-7596959)
chr8 (37-118)||(12045541-12045622)
chr8 (178-219)||(27836183-27836224)
chr8 (42-118)||(30578356-30578433)
chr8 (178-219)||(40102026-40102067)
chr8 (37-118)||(42443208-42443289)
chr8 (42-118)||(43602315-43602392)
chr8 (183-227)||(5740806-5740850)
chr8 (39-118)||(9305886-9305966)
chr8 (38-114)||(9550312-9550388)
chr8 (41-108)||(9895118-9895186)
chr8 (31-74)||(44607694-44607738)
[»] chr1 (85 HSPs)
chr1 (36-118)||(50884657-50884739)
chr1 (37-118)||(4511665-4511746)
chr1 (37-118)||(30530287-30530368)
chr1 (37-118)||(49596343-49596424)
chr1 (39-118)||(52369001-52369080)
chr1 (37-118)||(33669711-33669792)
chr1 (36-114)||(8464400-8464478)
chr1 (37-118)||(50017311-50017392)
chr1 (38-118)||(34002209-34002289)
chr1 (37-118)||(52417633-52417714)
chr1 (37-118)||(33422107-33422188)
chr1 (37-118)||(44112556-44112637)
chr1 (24-117)||(44730747-44730840)
chr1 (46-118)||(30530471-30530543)
chr1 (46-118)||(40139215-40139287)
chr1 (42-118)||(51339593-51339669)
chr1 (51-118)||(15059726-15059793)
chr1 (38-89)||(21154354-21154405)
chr1 (44-118)||(5975639-5975713)
chr1 (42-118)||(25098684-25098757)
chr1 (44-118)||(48576400-48576474)
chr1 (178-219)||(8464540-8464581)
chr1 (34-118)||(21255669-21255754)
chr1 (37-118)||(36930644-36930725)
chr1 (33-109)||(40605304-40605381)
chr1 (178-227)||(44112449-44112498)
chr1 (53-118)||(45470743-45470808)
chr1 (37-118)||(48872481-48872562)
chr1 (42-118)||(4604631-4604707)
chr1 (42-118)||(32821737-32821813)
chr1 (178-225)||(24774972-24775019)
chr1 (44-118)||(24611946-24612020)
chr1 (37-118)||(1724122-1724203)
chr1 (37-118)||(5315313-5315394)
chr1 (178-219)||(11068428-11068469)
chr1 (37-114)||(22389414-22389490)
chr1 (37-118)||(24775077-24775158)
chr1 (37-118)||(27352732-27352813)
chr1 (178-219)||(30530426-30530467)
chr1 (178-219)||(33422246-33422287)
chr1 (178-219)||(34002347-34002388)
chr1 (37-118)||(41558095-41558176)
chr1 (42-118)||(43640879-43640956)
chr1 (37-114)||(44641791-44641868)
chr1 (178-219)||(44641930-44641971)
chr1 (42-118)||(47059782-47059859)
chr1 (183-224)||(49589995-49590036)
chr1 (37-118)||(49621463-49621544)
chr1 (38-118)||(6841893-6841973)
chr1 (38-118)||(38233375-38233455)
chr1 (34-118)||(39010916-39011000)
chr1 (38-118)||(51250180-51250260)
chr1 (178-222)||(52417531-52417575)
chr1 (35-118)||(25061835-25061918)
chr1 (51-118)||(42792385-42792452)
chr1 (37-118)||(49453582-49453660)
chr1 (178-225)||(50226906-50226953)
chr1 (44-99)||(52078542-52078597)
chr1 (44-118)||(4154684-4154758)
chr1 (39-73)||(5043195-5043229)
chr1 (44-114)||(32811759-32811829)
chr1 (44-114)||(38019398-38019467)
chr1 (36-118)||(40595941-40596023)
chr1 (178-224)||(44672057-44672103)
chr1 (178-224)||(48872377-48872423)
chr1 (178-224)||(49596233-49596279)
chr1 (178-224)||(52369138-52369184)
chr1 (37-118)||(366759-366840)
chr1 (35-107)||(5383872-5383945)
chr1 (37-118)||(8934422-8934503)
chr1 (37-117)||(10426835-10426916)
chr1 (37-114)||(11570251-11570328)
chr1 (42-118)||(16987549-16987626)
chr1 (178-219)||(28253018-28253059)
chr1 (30-83)||(30687189-30687242)
chr1 (178-219)||(31436823-31436864)
chr1 (184-225)||(33694234-33694275)
chr1 (178-219)||(45470867-45470908)
chr1 (42-118)||(49189103-49189180)
chr1 (178-219)||(50017450-50017491)
chr1 (178-219)||(50118923-50118964)
chr1 (37-118)||(50527945-50528026)
chr1 (31-63)||(7648407-7648439)
chr1 (38-118)||(40610331-40610411)
chr1 (34-118)||(44950306-44950390)
[»] scaffold0020 (2 HSPs)
scaffold0020 (37-118)||(156008-156089)
scaffold0020 (178-219)||(155909-155950)
[»] chr7 (58 HSPs)
chr7 (37-118)||(36186782-36186863)
chr7 (38-118)||(30391248-30391328)
chr7 (38-118)||(47644811-47644891)
chr7 (35-118)||(17500799-17500882)
chr7 (35-118)||(17552332-17552415)
chr7 (36-118)||(27070556-27070638)
chr7 (36-118)||(27207675-27207757)
chr7 (38-114)||(49089053-49089129)
chr7 (39-118)||(5724140-5724219)
chr7 (35-114)||(21153158-21153237)
chr7 (53-118)||(16567402-16567467)
chr7 (53-118)||(16598195-16598260)
chr7 (37-118)||(24267535-24267616)
chr7 (37-114)||(31436523-31436599)
chr7 (38-118)||(12141986-12142066)
chr7 (37-118)||(8792488-8792566)
chr7 (37-118)||(25940555-25940636)
chr7 (35-118)||(4678165-4678249)
chr7 (38-118)||(5978681-5978761)
chr7 (42-118)||(18157078-18157154)
chr7 (36-114)||(9031313-9031391)
chr7 (34-118)||(10014839-10014924)
chr7 (178-219)||(17500700-17500741)
chr7 (178-219)||(17552473-17552514)
chr7 (178-219)||(21752661-21752702)
chr7 (37-114)||(36920891-36920968)
chr7 (37-118)||(45981305-45981386)
chr7 (37-118)||(46651774-46651855)
chr7 (178-218)||(5724042-5724082)
chr7 (184-224)||(27070701-27070741)
chr7 (184-224)||(27207572-27207612)
chr7 (42-118)||(27688739-27688815)
chr7 (42-118)||(43107714-43107790)
chr7 (46-118)||(44196110-44196182)
chr7 (37-108)||(2469804-2469875)
chr7 (37-118)||(7807158-7807238)
chr7 (37-108)||(35072133-35072204)
chr7 (178-224)||(16567314-16567360)
chr7 (178-224)||(16598302-16598348)
chr7 (178-224)||(28824501-28824547)
chr7 (44-118)||(31009535-31009609)
chr7 (37-118)||(37392145-37392227)
chr7 (178-224)||(47644703-47644749)
chr7 (41-114)||(27075574-27075647)
chr7 (41-114)||(27202664-27202737)
chr7 (178-219)||(31364911-31364952)
chr7 (37-118)||(35098475-35098556)
chr7 (37-82)||(39137152-39137197)
chr7 (34-63)||(41910231-41910260)
chr7 (42-118)||(46148268-46148345)
chr7 (184-224)||(9363385-9363425)
chr7 (184-224)||(18505771-18505811)
chr7 (185-225)||(30180515-30180555)
chr7 (38-114)||(33212132-33212208)
chr7 (46-114)||(42640949-42641017)
chr7 (54-118)||(43444730-43444794)
chr7 (78-118)||(44817792-44817832)
chr7 (183-219)||(49089185-49089221)
[»] scaffold0194 (1 HSPs)
scaffold0194 (59-118)||(29720-29779)
[»] chr6 (44 HSPs)
chr6 (27-118)||(3821506-3821597)
chr6 (36-114)||(19788963-19789041)
chr6 (36-114)||(28647322-28647400)
chr6 (36-118)||(30622126-30622208)
chr6 (37-118)||(7693417-7693498)
chr6 (32-118)||(9200212-9200298)
chr6 (67-118)||(3800696-3800747)
chr6 (44-118)||(26860510-26860584)
chr6 (37-118)||(14569269-14569350)
chr6 (178-227)||(19789103-19789152)
chr6 (37-101)||(27102219-27102283)
chr6 (37-101)||(27144041-27144105)
chr6 (178-224)||(3821376-3821422)
chr6 (44-118)||(6158675-6158749)
chr6 (37-118)||(2333477-2333558)
chr6 (42-118)||(15328591-15328668)
chr6 (37-118)||(16336958-16337039)
chr6 (178-227)||(29383552-29383601)
chr6 (37-118)||(32729991-32730072)
chr6 (178-226)||(3049557-3049605)
chr6 (180-224)||(16337099-16337143)
chr6 (54-118)||(23633230-23633294)
chr6 (38-114)||(27176063-27176139)
chr6 (178-225)||(28965867-28965914)
chr6 (181-219)||(2333368-2333406)
chr6 (178-224)||(3800562-3800608)
chr6 (178-224)||(15722530-15722576)
chr6 (44-118)||(18792327-18792401)
chr6 (178-224)||(23633350-23633396)
chr6 (37-118)||(25924751-25924833)
chr6 (37-118)||(28548908-28548990)
chr6 (37-118)||(32253882-32253964)
chr6 (61-118)||(2165212-2165269)
chr6 (61-118)||(2176845-2176902)
chr6 (178-219)||(8395345-8395386)
chr6 (42-118)||(15364761-15364838)
chr6 (37-74)||(28875239-28875276)
chr6 (178-219)||(30253340-30253381)
chr6 (178-219)||(32457279-32457320)
chr6 (178-219)||(32784741-32784782)
chr6 (178-227)||(34413087-34413136)
chr6 (42-118)||(8173205-8173281)
chr6 (42-82)||(25567386-25567426)
chr6 (178-226)||(31480861-31480909)
[»] scaffold0072 (1 HSPs)
scaffold0072 (37-118)||(14437-14518)
[»] scaffold0057 (1 HSPs)
scaffold0057 (41-117)||(21466-21542)
[»] scaffold0024 (2 HSPs)
scaffold0024 (72-118)||(60569-60615)
scaffold0024 (178-224)||(60467-60513)
[»] scaffold0166 (1 HSPs)
scaffold0166 (37-118)||(34938-35018)
[»] scaffold0154 (1 HSPs)
scaffold0154 (44-118)||(4417-4490)
[»] scaffold0036 (1 HSPs)
scaffold0036 (37-118)||(18106-18186)
[»] scaffold0184 (1 HSPs)
scaffold0184 (42-118)||(16487-16563)
[»] scaffold0078 (1 HSPs)
scaffold0078 (42-118)||(56281-56357)
[»] scaffold0111 (2 HSPs)
scaffold0111 (67-118)||(36786-36837)
scaffold0111 (178-219)||(36893-36934)
[»] scaffold0014 (1 HSPs)
scaffold0014 (178-224)||(199264-199310)
[»] scaffold0504 (1 HSPs)
scaffold0504 (178-219)||(10762-10803)
[»] scaffold0115 (1 HSPs)
scaffold0115 (37-118)||(15077-15157)
[»] scaffold0011 (1 HSPs)
scaffold0011 (178-231)||(219691-219744)
[»] scaffold0511 (1 HSPs)
scaffold0511 (44-118)||(11740-11814)
[»] scaffold0001 (1 HSPs)
scaffold0001 (44-86)||(404882-404924)
[»] scaffold0576 (1 HSPs)
scaffold0576 (42-118)||(9532-9609)
[»] scaffold0286 (1 HSPs)
scaffold0286 (61-118)||(17140-17197)
[»] scaffold0238 (2 HSPs)
scaffold0238 (178-219)||(16390-16431)
scaffold0238 (37-118)||(16493-16574)
[»] scaffold0172 (2 HSPs)
scaffold0172 (178-219)||(16978-17019)
scaffold0172 (30-118)||(17077-17166)
[»] scaffold0131 (1 HSPs)
scaffold0131 (178-219)||(15561-15602)
[»] scaffold0060 (1 HSPs)
scaffold0060 (178-219)||(6820-6861)
[»] scaffold0009 (1 HSPs)
scaffold0009 (178-223)||(263722-263767)
[»] scaffold0241 (1 HSPs)
scaffold0241 (37-108)||(5341-5413)


Alignment Details
Target: chr2 (Bit Score: 103; Significance: 2e-51; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 42665667 - 42665781
Alignment:
Q  4 ggtgatgctgatcatagtttagacctttaaattagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttca 103  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42665667 ggtgatactgatcatagtttagacctttaaattagagtagtgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctcttttttca 42665766  T
Q  104 ttggtccaaaacaat 118  Q
    |||||||||||||||    
T  42665767 ttggtccaaaacaat 42665781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 11442854 - 11442774
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| |||||| |||||| |||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  11442854 gagtagtgatatatgtacatccatttggtacaactttgttgacaactttaatttgttctcttttcattggtccaaaacaat 11442774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 42554959 - 42554879
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaa 117  Q
    |||||||| ||||||  |||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||||||||||||    
T  42554959 ttagagtagtgatataagtacaaccatttggtacaactttgataacaactttcattt--tctctttccattggtccaaaacaa 42554879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 38912489 - 38912570
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||| |||||||||||||||||||||||| || | |||||||||||| | ||||||||||| || ||||||||    
T  38912489 agagtaatgatatatgtacaaccatttggtacaactttaataataactttcatttgttttcttttcattgatctaaaacaat 38912570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 42665839 - 42665899
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaaatgatgtccatc 238  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||    
T  42665839 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttctcttaaattatgttcatc 42665899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 10389401 - 10389323
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaaca 116  Q
    ||||| |||||| ||||||||||||||| ||||||||| |||| ||||||| || ||||||| ||||||||||||||||    
T  10389401 gagtagtgatatatgtacaaccatttgggacaactttggtgacgactttcactttctctcttctcattggtccaaaaca 10389323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 546271 - 546354
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| |||||| |  |||||||||||  ||||||||| |||||||||| |||| ||||||| ||||||||||||||||||    
T  546271 ttagagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtccaaaacaat 546354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 2308213 - 2308282
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattgg 107  Q
    ||||| |||||||||||||||||| |   ||||||||||||||||||||||||| ||||||| |||||||    
T  2308213 gagtagtgatatttgtacaaccatatatgacaactttgatgacaactttcattttctctcttctcattgg 2308282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 36763403 - 36763488
Alignment:
Q  33 aattagagtaatgatatttgtacaaccatttggta-caactttgatgacaactttcatttgctctcttttcattggtccaaaacaa 117  Q
    |||||||| ||||||||||| ||||||||||| || ||| ||| |||||||| ||| ||| ||||||||||||||||| |||||||    
T  36763403 aattagagcaatgatatttgaacaaccatttgttaacaatttttatgacaaccttctttttctctcttttcattggtcaaaaacaa 36763488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 5167635 - 5167711
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| |||||||||||||| ||| |   ||||||| ||||||| ||||||||||||||||| ||||||||    
T  5167635 aatgatatttgaacaaccatttggtataacctacttgacaaccttcattttctctcttttcattggtcaaaaacaat 5167711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 36909732 - 36909812
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||||||| ||||||  |||||||||||||||||||||  ||| ||||||| | ||||||| ||||||||    
T  36909732 gagtagtgatatttgtacatccatttcatacaactttgatgacaactttgtttttctctcttcttattggtcaaaaacaat 36909812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 35965619 - 35965572
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctta 225  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  35965619 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttttctta 35965572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 7497879 - 7497960
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| |  |||||||||||  ||||||||| |||||||||| |||| ||||||| |||||||| |||||||||    
T  7497879 agagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggttcaaaacaat 7497960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 40496533 - 40496452
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||||||||||||| |   | |||||||||||||||||| |||| |||||||   ||||||||||||||||    
T  40496533 agagttatgatatttgtacaaccatatctaataactttgatgacaacttttatttactctcttcctattggtccaaaacaat 40496452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 43650576 - 43650617
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  43650576 ttgtcaaaaagttgtattaaagtgattgtacaaatatcattt 43650617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 30856985 - 30856909
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| || ||||||||||||||||| ||   ||||||| ||| ||| ||||||||||||||||| ||||||||    
T  30856985 aatgatatatgaacaaccatttggtacaatttatttgacaaccttctttttctctcttttcattggtcaaaaacaat 30856909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 42251950 - 42251994
Alignment:
Q  181 tcaaaaagttgtaataaagtgattgtacaaatatcatttttctta 225  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||    
T  42251950 tcaaaaagttgtactaaagtgattgtacaaatatcatttctctta 42251994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 10550345 - 10550428
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||||| ||| ||||||| | ||||||||| ||||||||||  ||| |||| |||| ||||||| ||||||||    
T  10550345 tagagtaatgatatttggacatccatttgatgacaactttgttgacaactttgtttttctctatttttattggtcaaaaacaat 10550428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 19913969 - 19913886
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaacttt-gatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| ||||||||| ||||||||||  ||||||||| | ||||||||||  ||| ||||||||||||||||  ||||||||    
T  19913969 tagagtagtgatatttgaacaaccatttcatacaactttcggtgacaactttttttttctctcttttcattggttaaaaacaat 19913886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 36795911 - 36795836
Alignment:
Q  39 agtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||||||| |||||||| |||| | ||||||||||||| | ||||||||| |||| |||| ||||||| ||||    
T  36795911 agtaatgatatatgtacaactatttaggacaactttgatgatagctttcattttctctttttttattggtcaaaaa 36795836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 7498018 - 7498064
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||    
T  7498018 ttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctctt 7498064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 22390196 - 22390150
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| ||| |||||||||||||||||||||| ||||    
T  22390196 ttgtcaaaaagttgtcatagagtgattgtacaaatatcatttctctt 22390150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 546412 - 546453
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  546412 ttgttaaaaagttgtaataaagtggttgtacaaatatcattt 546453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 3091924 - 3091843
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| ||||  ||||| |||||||||  |||||||||   ||| ||||||||||||||||| ||||||||    
T  3091924 agagtagtgatatttgaacaattatttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaat 3091843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 13711244 - 13711163
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| ||||| |||| ||||||||||  |||||||||   ||| ||||||||||||||||  ||||||||    
T  13711244 agagtagtgatatttgaacaactattttgtacaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaat 13711163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 42554820 - 42554779
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  42554820 ttgtaaaaaagttgtaataaagtggttgtacaaatatcattt 42554779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 12193635 - 12193599
Alignment:
Q  183 aaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||||||| |||||||||||||||||    
T  12193635 aaaaagttgtaataaagtggttgtacaaatatcattt 12193599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 16447276 - 16447320
Alignment:
Q  181 tcaaaaagttgtaataaagtgattgtacaaatatcatttttctta 225  Q
    ||||||| |||||||||| || |||||||||||||||||||||||    
T  16447276 tcaaaaaattgtaataaaatggttgtacaaatatcatttttctta 16447320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 19668080 - 19668156
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||||||||| |||||| |   ||| ||| ||| ||| ||||||||||||||||| ||||||||    
T  19668080 aatgatatttgaacaaccatttgatacaacctatttgataaccttccttttctctcttttcattggtcaaaaacaat 19668156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 1574638 - 1574559
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||| ||||||||||| ||||||||||| | |||||||| |||||||| |   ||| ||||||||||||||||| ||||    
T  1574638 tagagcaatgatatttgaacaaccatttgctaacaactttaatgacaacctcattttactctcttttcattggtcaaaaa 1574559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 16051275 - 16051353
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||||| ||||||||||||| |  |||||||||||| | ||||||||||| |||| |||| |||| ||||||| ||||    
T  16051275 ttagagtagtgatatttgtacatctttttggtacaactcttatgacaactttaattt-ctcttttttgattggtcaaaaa 16051353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 33296098 - 33296145
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctta 225  Q
    ||||||||||||||| | |||||| ||||||||||||||||| |||||    
T  33296098 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctta 33296145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 3960075 - 3959998
Alignment:
Q  42 aatgatatttgtacaaccatttg-gtacaactttgatgacaactttcatttg-ctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||||||||| | |||||||| ||||||| ||||||||  |||||||||||||| || ||||||||    
T  3960075 aatgatatttgaacaaccatttgcgaacaacttttatgacaa-tttcatttttctctcttttcattgatcaaaaacaat 3959998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 4723742 - 4723672
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||| ||||||||  |||||||||||||| || ||||||||  ||| ||||||||| ||||||| ||||    
T  4723742 tgatatatgtacaactctttggtacaacttttataacaactttagttttctctcttttgattggtcaaaaa 4723672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 4738599 - 4738645
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| | |||||| ||||||||||||||||| ||||    
T  4738599 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctt 4738645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 6666173 - 6666123
Alignment:
Q  67 acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaa 117  Q
    |||| |||| |||||||||| |||| ||||||| |||||||||||||||||    
T  6666173 acaattttgttgacaacttttattttctctcttctcattggtccaaaacaa 6666123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 11164271 - 11164345
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||| ||||| ||||| |||||||||  |||||||||   ||| ||||||||||||||||  ||||||||    
T  11164271 tgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaat 11164345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 11828707 - 11828789
Alignment:
Q  37 agagtaatgatatttgtacaaccatttgg-tacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||| |||||  ||| | ||||||||| | |||||| ||  | ||||||||||||||||||| ||||||||    
T  11828707 agagtaatgatatttgaacaacttttttgctacaacttttaggacaaccttgttgtgctctcttttcattggtcaaaaacaat 11828789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 18373891 - 18373845
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||| ||||| ||||| |||||||||||||||||||| ||||    
T  18373891 ttgtcaaaatgttgtcataaaatgattgtacaaatatcatttctctt 18373845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 32750042 - 32749996
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| | |||||| ||||||||||||||||| ||||    
T  32750042 ttgtcaaaaagttgtgaaaaagtggttgtacaaatatcatttctctt 32749996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 43665666 - 43665624
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttt 220  Q
    ||||||||||||||| | |||||| ||||||||||||||||||    
T  43665666 ttgtcaaaaagttgttaaaaagtggttgtacaaatatcatttt 43665624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 43791678 - 43791760
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||| |||||| ||| || ||||||||  ||||||| | | ||| ||||||||| ||||||| ||||||||    
T  43791678 agagtaatgatatttgaacaaccttttagtgacaacttttgtgacaacctaccttttctctctttttattggtcaaaaacaat 43791760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 44189867 - 44189825
Alignment:
Q  182 caaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||    
T  44189867 caaaaagttgtcataaagtggttgtacaaatatcatttctctt 44189825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 6666059 - 6666018
Alignment:
Q  183 aaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    |||||||||||||||| || ||||||||||||||||| ||||    
T  6666059 aaaaagttgtaataaaatggttgtacaaatatcatttctctt 6666018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 13881254 - 13881197
Alignment:
Q  61 tttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||||||  ||||||||||  | ||||||||||||||||||| ||||||||    
T  13881254 tttgctacaacttttgtgacaactttattgtgctctcttttcattggtcaaaaacaat 13881197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 14021379 - 14021322
Alignment:
Q  61 tttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||||||  ||||||||||  | ||||||||||||||||||| ||||||||    
T  14021379 tttgctacaacttttgtgacaactttattgtgctctcttttcattggtcaaaaacaat 14021322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 19637410 - 19637365
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaa 82  Q
    |||| ||||||||||| |||||||||||||||||| || |||||||    
T  19637410 agagcaatgatatttgaacaaccatttggtacaacctttatgacaa 19637365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 19836003 - 19835958
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaa 82  Q
    |||| ||||||||||| |||||||||||||||||| || |||||||    
T  19836003 agagcaatgatatttgaacaaccatttggtacaacctttatgacaa 19835958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 23345016 - 23345057
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||    
T  23345016 ttgtcaaaaagttgttataaaatgaatgtacaaatatcattt 23345057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 30413624 - 30413701
Alignment:
Q  42 aatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| ||||||  | |||| |||| ||||||||||  ||| ||||||||| ||||||| ||||||||    
T  30413624 aatgatatttgtacatccatttaatgacaattttggtgacaactttgcttttctctcttttgattggtcaaaaacaat 30413701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 30974016 - 30974057
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| ||||| |||||||| |||||||||||    
T  30974016 ttgtcaaaaagttgtcataaaatgattgtaaaaatatcattt 30974057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 34249624 - 34249583
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  34249624 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcattt 34249583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 37631259 - 37631336
Alignment:
Q  42 aatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||||||||| | |||||||| |||||||| |   ||| ||||||| ||||||||| ||||||||    
T  37631259 aatgatatttgaacaaccatttgctaacaacttttatgacaacctcttttttctctcttctcattggtcaaaaacaat 37631336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 40951373 - 40951292
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||||| || ||||||||| |||||||| |   ||||||| ||| ||| ||||||||||||||||  ||||||||    
T  40951373 agagcaatgatatatgaacaaccattaggtacaacctatttgacaaccttccttttctctcttttcattggtaaaaaacaat 40951292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 4842412 - 4842488
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| || || |||||||| |||||| |   ||||||| ||||||| |||| |||||||||||| ||||||||    
T  4842412 aatgatatatgaactaccatttgatacaacctatttgacaaccttcattttctcttttttcattggtcaaaaacaat 4842488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 6511248 - 6511300
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttc 87  Q
    |||||| ||||||||||| ||||||||||  |||||||||  |||||||||||    
T  6511248 ttagagaaatgatatttgaacaaccattttttacaactttagtgacaactttc 6511300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 12877463 - 12877503
Alignment:
Q  184 aaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||| ||||| || ||||||||||||||||||||||    
T  12877463 aaaagttgtcataaattggttgtacaaatatcatttttctt 12877503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 16447153 - 16447205
Alignment:
Q  54 acaaccatttggtacaactttgatgacaactttcatttgctctcttttcattg 106  Q
    |||| ||||||| |||| |||||||| ||||||||||| ||||||| ||||||    
T  16447153 acaatcatttggaacaattttgatgataactttcatttcctctcttctcattg 16447205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 33295973 - 33296056
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaacttt-gatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| ||||||||| | ||| |||| |||||||||| | ||||||||||  ||| ||||||||||||||||  ||||||||    
T  33295973 ttagagtagtgatatttgaagaactatttcgtacaacttttggtgacaactttttttt-ctctcttttcattggttaaaaacaat 33296056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 35965764 - 35965684
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| |||||| |||||||||||||   | ||||||||||| |||||| | || |||| || |||||||| |||||||||    
T  35965764 gagtagtgatatatgtacaaccatttatgagaactttgatgataacttttactttctctattctcattggttcaaaacaat 35965684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 45515485 - 45515568
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaacttt-gatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| | ||||||||| ||||||||||  ||||||||| | ||||||||| | ||| ||||||||||||||||  ||||||||    
T  45515485 ttagaggattgatatttgaacaaccatttcatacaacttttggtgacaactt-ctttttctctcttttcattggttaaaaacaat 45515568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 22154047 - 22153970
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22154047 agagtagtgatatttgtacaaccatttggtacaactttaatgacaactttcatttgctctcttttcattggtccaaaa 22153970  T

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Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 11233919 - 11234000
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||| |||||||||||    
T  11233919 agagtactgatatatgtacaaccatttggtacaactttgatgacaacttttatttactctcttctcattgatccaaaacaat 11234000  T

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Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 35425560 - 35425641
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| |||| || ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  35425560 agagtagtgatatatgtataatcatttggtacatctttgatgacaactttcatttgctctcttctcattgatccaaaacaat 35425641  T

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Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 42424414 - 42424336
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaac 115  Q
    |||||| |||||| |||||| ||||||||||||||||||||||||||||||||||  |||||| |||||| ||||||||    
T  42424414 agagtagtgatatatgtacatccatttggtacaactttgatgacaactttcatttattctcttctcattgctccaaaac 42424336  T

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Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 46473311 - 46473230
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||||||||   ||| ||||||||||||||||| ||||||||    
T  46473311 agagtaatgatatttgaacaaccatttgatacaacttttatgacaacttcttttttctctcttttcattggtcaaaaacaat 46473230  T

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Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 26669021 - 26668942
Alignment:
Q  39 agtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||| ||||||||||||| | |||||| |||||||||||||||||| |||  |||||||||||||||||||||    
T  26669021 agtagtgatatatgtacaaccatttaggacaactatgatgacaactttcattttctcatttttcattggtccaaaacaat 26668942  T

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Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 32796021 - 32795938
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||||| |||||||||||||||||| |   ||||||||||||||| ||||||||| ||||||| ||||||||    
T  32796021 ttagagcaatgatatttgaacaaccatttggtacaacctatttgacaactttcattttctctctttttattggtcaaaaacaat 32795938  T

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Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 18713787 - 18713709
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||| |||||| ||||||||||||||| |||| ||| |||||||||||||||  ||||||| ||||||||||||||    
T  18713787 tagagtagtgatatatgtacaaccatttggaacaattttaatgacaactttcattctctctcttctcattggtccaaaa 18713709  T

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Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 25959430 - 25959511
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| ||||||||||| |||||| |   ||||||||||||||| ||||||||||||||||| ||||||||    
T  25959430 agagcaatgatatttgaacaaccatttgatacaacctatttgacaactttcattttctctcttttcattggtcaaaaacaat 25959511  T

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Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 622345 - 622428
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| |||||| |  |||||||||||  ||||||||| |||||||||| |||| ||||||| ||||||||||||||||||    
T  622345 ttagagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtccaaaacaat 622428  T

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Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 47509037 - 47509116
Alignment:
Q  39 agtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||| |||||||||||||| ||||||||||||||||| ||| ||||| ||| || | ||||||||||||||||    
T  47509037 agtagtgatatatgtacaaccatttgatacaactttgatgacaatttttatttgttcttttcttattggtccaaaacaat 47509116  T

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Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 11173633 - 11173552
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| ||||||| ||||||||||| |||||||||  |||||||||   ||| ||||||||||||||||| ||||||||    
T  11173633 agagtaataatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaat 11173552  T

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Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 43176377 - 43176304
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtcca 111  Q
    ||||| |||||| | |||||||||||| |||||||||||||| |||||| |||||||||||||| |||| ||||    
T  43176377 gagtagtgatatatatacaaccatttgatacaactttgatgataacttttatttgctctctttttattgatcca 43176304  T

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Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 44593149 - 44593068
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| | || ||||||||||||||||  ||||||| ||||||| |||| |||||||||||| ||||||||    
T  44593149 agagcaatgatatttgaataatcatttggtacaacttttttgacaaccttcattttctctattttcattggtcaaaaacaat 44593068  T

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Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 50294012 - 50294093
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||  ||||||||||||||||||||   ||||||||||| ||| |||||||||||||| || ||||||||    
T  50294012 agagcaatgatattttaacaaccatttggtacaacttatttgacaactttctttttctctcttttcattgatcaaaaacaat 50294093  T

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Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 28300535 - 28300615
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||| |||||||| || ||||||| |  |||||||||| |||| ||||||||||||||||| ||||||||    
T  28300535 gagtagtgatatttgaacaaccatatgatacaactcttgtgacaacttttattttctctcttttcattggtcaaaaacaat 28300615  T

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Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 53133843 - 53133915
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaaca 116  Q
    |||||||||||||||||| ||  |||||||||||||||||| |||  ||||||||||  ||||||||||||||    
T  53133843 tgatatttgtacaaccatgtgtgacaactttgatgacaactatcaggtgctctctttctattggtccaaaaca 53133915  T

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Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 1901812 - 1901895
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||| ||||||| |||||||||||||||||| |   ||||||| ||| ||| ||||||||||||||||| ||||||||    
T  1901812 ttagagcaataatatttgaacaaccatttggtacaacctatttgacaaccttccttttctctcttttcattggtcaaaaacaat 1901895  T

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Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 1911258 - 1911341
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||| ||||||| |||||||||||||||||| |   ||||||| ||| ||| ||||||||||||||||| ||||||||    
T  1911258 ttagagcaataatatttgaacaaccatttggtacaacctatttgacaaccttccttttctctcttttcattggtcaaaaacaat 1911341  T

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Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 31326893 - 31326810
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||||| |||||||||||||||||  |   ||||||  ||||||| ||||||||||||||||| ||||||||    
T  31326893 ttagagcaatgatatttgaacaaccatttggtacaatctatttgacaatcttcattttctctcttttcattggtcaaaaacaat 31326810  T

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Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 7231893 - 7231975
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| ||||||||| ||||||||||| |||||||||  |||||| ||   ||| ||||||||||||||||| ||||||||    
T  7231893 tagagtagtgatatttgaacaaccatttgatacaacttttgtgacaatttattttttctctcttttcattggtcaaaaacaat 7231975  T

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Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 40159713 - 40159791
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||| |||||| ||||||||  |||||||||||||| |||||||||||  ||| ||||||||| ||||||| ||||    
T  40159713 tagagtagtgatatatgtacaactctttggtacaactttcatgacaactttggttttctctcttttgattggtcaaaaa 40159791  T

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Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 7867597 - 7867678
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| |||||||||||||||||  |   ||||||| ||||||| ||||||||||||||||  ||||||||    
T  7867597 agagcaatgatatttgaacaaccatttggtacaatctatttgacaaccttcattttctctcttttcattggtaaaaaacaat 7867678  T

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Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 22153908 - 22153867
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  22153908 ttgtcaaaaagctgtaataaagtgattgtacaaatatcattt 22153867  T

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Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 43900784 - 43900825
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  43900784 ttgtcaaaaagttgtaataaagtggttgtacaaatatcattt 43900825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 44334828 - 44334869
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  44334828 ttgtcaaaaagttgtaataaagtggttgtacaaatatcattt 44334869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 37323841 - 37323769
Alignment:
Q  46 atatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||||| |||||| |||||||||||||||| |||||||| ||| ||| | ||||||||||| ||||    
T  37323841 atatatgtacaactatttgggacaactttgatgacaattttcattttctcccttcttattggtccaaaccaat 37323769  T

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Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 40785584 - 40785668
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggta-caactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||||| ||||||||||| || | |||||||||||||| | | ||| |||| |||||||||||| ||||||||    
T  40785584 ttagagcaatgatatttgaacaaccatttgctaacgactttgatgacaacctcctttttctctattttcattggtcaaaaacaat 40785668  T

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Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 44334706 - 44334770
Alignment:
Q  54 acaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||  ||||||||| |||||| ||| |||| ||||||| ||||||||||||||||||    
T  44334706 acaaccatttgtgacaactttgttgacaatttttattttctctcttctcattggtccaaaacaat 44334770  T

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Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 12094280 - 12094359
Alignment:
Q  39 agtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||||||||||||| | |   |||||||||||||||  |||||||||||||||| | ||||||| ||||||||    
T  12094280 agtagtgatatttgtacaaccgtctatgacaactttgatgacacatttcatttgctctcttcttattggtctaaaacaat 12094359  T

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Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 16479631 - 16479681
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttc 87  Q
    |||| |||||||||||||||||||||| ||||||||||  |||||||||||    
T  16479631 agagaaatgatatttgtacaaccattttgtacaacttttgtgacaactttc 16479681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 23920473 - 23920399
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||||| ||  |||||||| ||||||| ||| |||| |||||||   ||||||||||||||||    
T  23920473 tgatatttgtacaaccatatgtaacaactttaatgacaatttttatttactctcttcctattggtccaaaacaat 23920399  T

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Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 1295515 - 1295434
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| ||||||||||| ||||||  |  ||||||| ||| ||| || |||||||||||||| ||||||||    
T  1295515 agagcaatgatatttgaacaaccatttgctacaacaattttgacaaccttctttttctatcttttcattggtcaaaaacaat 1295434  T

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Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 3484900 - 3484859
Alignment:
Q  77 tgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  3484900 tgacaactttcattttctctcttctcattggtccaaaacaat 3484859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 24748638 - 24748593
Alignment:
Q  179 tgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  24748638 tgtcaaaaagttgcaataaagtggttgtacaaatatcatttctctt 24748593  T

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Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 35425699 - 35425740
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  35425699 ttgtcaaaaagttgtaataaagtggttgtacatatatcattt 35425740  T

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Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 39540279 - 39540234
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttct 223  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||    
T  39540279 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttttct 39540234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 43169640 - 43169722
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaacttt-gatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| ||||||||| ||||||||||  ||||||||| | ||||||||||  ||| ||||||||||||||||  ||||||||    
T  43169640 ttagagtagtgatatttgaacaaccatttcatacaacttttggtgacaacttt--ttttctctcttttcattggttaaaaacaat 43169722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 47683979 - 47683894
Alignment:
Q  32 aaattagagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaaca 116  Q
    |||||||||||||||||||||||||||||||| || ||||||||   |||||| |||  || ||||||| | ||||||| ||||||    
T  47683979 aaattagagtaatgatatttgtacaaccattttgtgacaacttttgagacaaccttctctttctctcttcttattggtcaaaaaca 47683894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 52727475 - 52727524
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaaa 227  Q
    |||||||||| || | |||||||||||||||||||||||||| |||||||    
T  52727475 ttgtcaaaaaattatcataaagtgattgtacaaatatcatttctcttaaa 52727524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 981648 - 981576
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||||||| |||||||||| ||||| | |   ||||||| ||||||| ||||||||||||||||| ||||    
T  981648 aatgatatttgaacaaccatttagtacagcctatttgacaaccttcattttctctcttttcattggtcaaaaa 981576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 1031320 - 1031396
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||  ||||||||||||||| |||||||||||  ||| || |||| | ||||||| ||||||||    
T  1031320 aatgatatttgaacaattatttggtacaacttttatgacaactttatttttctttcttcttattggtcaaaaacaat 1031396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 29706085 - 29706005
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||| ||||| ||||| |||||||||  |||||||||   ||| ||||||||||||||||  ||||||||    
T  29706085 gagtagtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggtaaaaaacaat 29706005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 36869723 - 36869806
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggta-caactttgatgacaactttcatttg-ctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||||| ||||||||||| || ||||||| |||||||| | |||||  ||||||||||||||||| ||||||||    
T  36869723 tagagcaatgatatttgaacaaccatttgctaacaactttcatgacaacct-catttctctctcttttcattggtcaaaaacaat 36869806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 42104592 - 42104537
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctctt 99  Q
    |||||||||||||||||| ||  |||||||| ||||||||||| |||| |||||||    
T  42104592 tgatatttgtacaaccatatgtaacaactttaatgacaacttttatttactctctt 42104537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 8066399 - 8066349
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaaat 228  Q
    ||||||||||||||| | |||||| ||||||||||||||||| || |||||    
T  8066399 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttctcctaaat 8066349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 11335329 - 11335379
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaaat 228  Q
    ||||||||||||||| | ||| || ||||||||||||||||| ||||||||    
T  11335329 ttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctcttaaat 11335379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 18169201 - 18169155
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| | |||||| ||||||||||||||||| ||||    
T  18169201 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctt 18169155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 20380772 - 20380858
Alignment:
Q  32 aaattagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||| ||||||||| ||||||||||   ||||||||  |||||||||   ||| ||| ||||||||||||| ||||||||    
T  20380772 aaataagagtagtgatatttgaacaaccattttaaacaacttttgtgacaacttcttttttctcacttttcattggtcaaaaacaat 20380858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 22813116 - 22813070
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| | |||||| ||||||||||||||||| ||||    
T  22813116 ttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctctt 22813070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 26279928 - 26279882
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| | |||||| ||||||||||||||||| ||||    
T  26279928 ttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctctt 26279882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 32687847 - 32687929
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaac-tttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||| ||||| ||||| |||||| |||| ||| |||||   ||| ||||||||||||||||  ||||||||    
T  32687847 agagtaatgatatttgaacaactatttgatacaacttttggtgataacttcttttttctctcttttcattggttaaaaacaat 32687929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 33007404 - 33007358
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| | ||| |||||||||||||||||||| ||||    
T  33007404 ttgtcaaaaagttgtgagaaattgattgtacaaatatcatttatctt 33007358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 36799582 - 36799500
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggta-caactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| |||| |||||| || ||| ||| ||||||||||   ||| ||||||||||||||||| ||||||||    
T  36799582 agagcaatgatatttgaacaaacatttgctaacaagtttcatgacaacttcatttttctctcttttcattggtcaaaaacaat 36799500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 43333697 - 43333743
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| ||||| ||| |||||||||||||||| ||||    
T  43333697 ttgtcaaaaagttgtcataaaatgactgtacaaatatcatttctctt 43333743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 45295626 - 45295708
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||||||| ||||||  | ||| ||||| ||||||||||  ||| ||||||||| ||||||| ||||||||    
T  45295626 agagcaatgatatttgtacatccatttaatgacagctttggtgacaactttgttttcctctcttttgattggtcaaaaacaat 45295708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 46315985 - 46316023
Alignment:
Q  181 tcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  46315985 tcaaaaagttgtcataaagtggttgtacaaatatcattt 46316023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 46953133 - 46953083
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaacttt 86  Q
    ||||||| ||||||||| ||||| ||||| ||||||||| |||||||||||    
T  46953133 tagagtagtgatatttgaacaactatttgatacaacttttatgacaacttt 46953083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 51410850 - 51410804
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| | |||||| ||||||||||||||||| ||||    
T  51410850 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttctctt 51410804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 51973439 - 51973389
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttc 87  Q
    |||| ||||||||||| ||| |||||||||||||||||  |||||||||||    
T  51973439 agagaaatgatatttgaacatccatttggtacaacttttgtgacaactttc 51973389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 55344183 - 55344265
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaac-tttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| ||||| ||||  |||||| ||| |||||||||||  ||| ||||||||||||||||  ||||||||    
T  55344183 agagtagtgatatttgaacaactatttcatacaacattttatgacaacttttcttttctctcttttcattggttaaaaacaat 55344265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 64
Target Start/End: Original strand, 8317951 - 8317980
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttg 64  Q
    ||||||||||||||||||||||||||||||    
T  8317951 ttagagtaatgatatttgtacaaccatttg 8317980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 19418184 - 19418225
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| ||||| || |||||||||||||||||    
T  19418184 ttgtcaaaaagttgtcataaaatggttgtacaaatatcattt 19418225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 26669072 - 26669031
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||| ||| |||||| ||||||||||||||||||||||||    
T  26669072 ttgtcacaaaattgtaacaaagtgattgtacaaatatcattt 26669031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 28300675 - 28300716
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||| |||||||||| |||||||| |||||||||||||||||    
T  28300675 ttgttaaaaagttgtcataaagtggttgtacaaatatcattt 28300716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 31017421 - 31017462
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | ||| ||||||||||||||||||||    
T  31017421 ttgtcaaaaagttgttagaaaatgattgtacaaatatcattt 31017462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 32981009 - 32981090
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| ||||||||||||||||| |||  ||||||| ||| | | ||| ||| ||||| ||| ||||||||    
T  32981009 agagcaatgatatttgaacaaccatttggtacaaattttttgacaaccttcttcttctcccttctcatttgtcaaaaacaat 32981090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 34733318 - 34733359
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  34733318 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 34733359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 37303101 - 37303142
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  37303101 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcattt 37303142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 40478179 - 40478256
Alignment:
Q  42 aatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| ||||||  | |||| |||| ||||||||||  ||| ||||||||| ||||||| ||||||||    
T  40478179 aatgatatttgtacatccatttaatgacaattttggtgacaactttgttttcctctcttttgattggtcaaaaacaat 40478256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 41369738 - 41369685
Alignment:
Q  61 tttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||||||||||| |||||||||||  ||| ||||||||| ||||||| ||||    
T  41369738 tttggtacaacttttatgacaactttagttttctctcttttgattggtcaaaaa 41369685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 41877867 - 41877790
Alignment:
Q  42 aatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| ||||||  | ||||||||| ||||||||||  ||| |||| |||| ||||||| ||||||||    
T  41877867 aatgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctcttttttgattggtcaaaaacaat 41877790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 48649624 - 48649583
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  48649624 ttgtcaaaaagttgttagaaagtggttgtacaaatatcattt 48649583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 51032514 - 51032591
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||| |||||| ||||||||  |||  ||||||||| ||||||||||| |||| || |||||| ||||||| ||||    
T  51032514 agagtagtgatatatgtacaacttttttatacaactttcatgacaactttaattttctatcttttgattggtcaaaaa 51032591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 51464299 - 51464340
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  51464299 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 51464340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 55196441 - 55196486
Alignment:
Q  69 aactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||||||| ||||||||||| ||||||||| ||| ||||||||    
T  55196441 aactttgatgataactttcattttctctctttttattagtccaaaa 55196486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 462294 - 462358
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattg 106  Q
    ||||||||||| |||||||||||||||||| |   ||||||| ||  ||| ||||||||||||||    
T  462294 aatgatatttgaacaaccatttggtacaacctatttgacaacctttcttttctctcttttcattg 462358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 622487 - 622523
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatat 214  Q
    ||||||||||||||||||||| || ||||||||||||    
T  622487 ttgtcaaaaagttgtaataaaatggttgtacaaatat 622523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 11335191 - 11335267
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||| |||||| ||||||||  |||||||||||||| || ||||||||  ||| ||||| ||| ||||||| ||||    
T  11335191 gagtagtgatatatgtacaactctttggtacaacttttattacaactttagttttctctcatttgattggtcaaaaa 11335267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 23906872 - 23906956
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| ||||||||||||| ||| ||| | ||||||||| ||||||| ||  ||| ||||||| | ||||||| ||||||||    
T  23906872 ttagagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttattggtcaaaaacaat 23906956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 24748741 - 24748705
Alignment:
Q  78 gacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  24748741 gacaactttcattttctctcttctcattggtccaaaa 24748705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 37303427 - 37303379
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaa 226  Q
    ||||||||||||||  | |||||| ||||||||||||||||| ||||||    
T  37303427 ttgtcaaaaagttgcgagaaagtggttgtacaaatatcatttctcttaa 37303379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 50025571 - 50025654
Alignment:
Q  36 tagagtaatgatatttgtacaacca-tttggtacaa-ctttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||||  ||||||| |||||||||| |||||| |||||||||  | | ||||||| ||||||||| ||||||||    
T  50025571 tagagtaatgatattttcacaaccattttggtacaacctttga-gacaactttgttgttctctcttctcattggtcaaaaacaat 50025654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 3722965 - 3723045
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  3722965 gagtaatgatatatgtacaaccatttgggacaactttgatgacaactttcattttctctctttttattggtccaaaacaat 3723045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 27341054 - 27340971
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| |||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  27341054 ttagagtagtgatatatgtacaatcatttggtacaattttgatgacaactttcatttgctctctttttattggtccaaaacaat 27340971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 33743221 - 33743302
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| ||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  33743221 agagtagtgatatatgtacaatcatttggtacaactttgatgacaacttttatttgctctcttctcattgatccaaaacaat 33743302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 21062959 - 21062884
Alignment:
Q  43 atgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| || | ||||| ||||||||||    
T  21062959 atgatatatgtacaaccatttggtacaattttgatgacaactttcatttgctcttttcttattggcccaaaacaat 21062884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 20125578 - 20125493
Alignment:
Q  32 aaattagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaa 117  Q
    ||||||||||  |||||| | |||||| |||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  20125578 aaattagagtggtgatatatatacaactatttgggacaactttgatgacaactttcattttctctcttctcattggtcaaaaacaa 20125493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 30301393 - 30301312
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| ||||||||||| ||  ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  30301393 agagtagtgatatatgtacaaccatatgtaacaactttgatgacaactttcatttcctctcttctcatttgtccaaaacaat 30301312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 39595462 - 39595376
Alignment:
Q  32 aaattagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||  |||||||||   ||| ||||||||||||||||| ||||||||    
T  39595462 aaatttgagtaatgatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaat 39595376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 18638729 - 18638806
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||| |||||| ||||||||||||||| |||||||||||||||||||| |||| |||| || | ||||||||||||    
T  18638729 agagtagtgatatatgtacaaccatttgggacaactttgatgacaacttttattttctcttttcttattggtccaaaa 18638806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 9636051 - 9636127
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| |||||||||||||||||| |   ||||||| ||||||| ||||||||||||||||| ||||||||    
T  9636051 aatgatatttgaacaaccatttggtacaacctatttgacaaccttcattttctctcttttcattggtcaaaaacaat 9636127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 34952291 - 34952374
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| |||||| |||||||  |||||| | |||||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  34952291 ttagagtagtgatatatgtacaattatttgggataactttgatgacaacttttattttctctcttcttattggtccaaaacaat 34952374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 24792635 - 24792555
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| |||||||||||||||||| |   ||||||| ||||||| |||||||||||||||| |||||||||    
T  24792635 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttcattttctctcttttcattggt-caaaacaat 24792555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 36624500 - 36624420
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| |||| |||||| ||||| ||   |||||| |||||||| ||||||||||||||||| ||||||||    
T  36624500 gagtaatgatatttgaacaagcatttgatacaatttatttgacaattttcattttctctcttttcattggtcaaaaacaat 36624420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 8725320 - 8725379
Alignment:
Q  53 tacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaa 112  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| || | ||||||||||    
T  8725320 tacaaccatttgggacaactttgatgacaactttcattttctcttttcttattggtccaa 8725379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 12878920 - 12878841
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||||||||||  ||||||||||||| ||| ||||||||| | || ||| |||| |||| |||||||||||||||||    
T  12878920 ttagagtaatgatacatgtacaaccatttagtataactttgatcataatttttatttactcttttttcattggtccaaaa 12878841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 39840593 - 39840672
Alignment:
Q  39 agtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||| |||||||| |||||  | |||||||||||||||||| |||| | ||||| ||||||||||||||||||    
T  39840593 agtagtgatatatgtacaactatttgtgataactttgatgacaacttttattttccctcttctcattggtccaaaacaat 39840672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 4878169 - 4878243
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||||| |   |||||||||||||||||||| |||| |||| |||  ||||||||||||||||    
T  4878169 tgatatttgtacaaccatatctaacaactttgatgacaacttttatttactctatttctattggtccaaaacaat 4878243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 38731050 - 38731000
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttc 87  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  38731050 agagtaatgatatttgtacaaccattttgtacaacttgtatgacaactttc 38731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 42825298 - 42825216
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| |||||| |  |||||||||||  |||| |||| |||||||||| |||| ||||||| ||||||||||||||||||    
T  42825298 tagagtagtgatatattgacaaccatttgtgacaattttgttgacaacttttattttctctcttctcattggtccaaaacaat 42825216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 36415951 - 36416027
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||| |||||| ||||||||  |||||||||||||| |||||||||||  ||| ||||||||| ||||||| ||||    
T  36415951 gagtagtgatatatgtacaactctttggtacaactttcatgacaactttggttttctctcttttgattggtcaaaaa 36416027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 125273 - 125194
Alignment:
Q  39 agtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||| ||||||||||| |||||||||   ||||||||   ||| ||||||||||||||||| ||||||||    
T  125273 agtagtgatatttgaacaaccatttgatacaacttttgcgacaacttcttttttctctcttttcattggtcaaaaacaat 125194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 2456199 - 2456128
Alignment:
Q  47 tatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| ||  |||| ||||||||||||| ||| ||||| |||||  ||||||||||||||||    
T  2456199 tatttgtacaaccatgtgtgacaattttgatgacaactatcagttgctttctttctattggtccaaaacaat 2456128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 32425121 - 32425058
Alignment:
Q  51 tgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||||| ||||||||||||||| ||||||||||| |||| || |||||| ||||||| ||||    
T  32425121 tgtacaactatttggtacaactttcatgacaactttaattttctatcttttgattggtcaaaaa 32425058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 5698215 - 5698297
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||| | |||| |||||||||||||||| |||||||| ||| ||| |||| || | ||||||| ||||||||    
T  5698215 tagagcaatgatattagaacaatcatttggtacaactttcatgacaaccttctttttctcttttgttattggtcaaaaacaat 5698297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 36581354 - 36581436
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||||| |||||||||| ||||||| |   ||||||| |||||||  |||||||| ||||||| ||||||||    
T  36581354 tagagcaatgatatttgaacaaccattttgtacaacctatttgacaaccttcattttttctctttttattggtcaaaaacaat 36581436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 42807456 - 42807410
Alignment:
Q  72 tttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||    
T  42807456 tttgatgacaacttttattttctctctttttattggtccaaaacaat 42807410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 91398 - 91317
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| ||||||||||| |||||| |   ||||||| ||  ||| ||||||||||||||||| ||||||||    
T  91398 agagcaatgatatttgaacaaccatttgatacaacctatttgacaacctttcttttctctcttttcattggtcaaaaacaat 91317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 14914553 - 14914472
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||||||| ||||||  || ||||||||||||||||||  |||  |||||| | ||||||| ||||||||    
T  14914553 agagtagtgatatttgtacatccatttcatataactttgatgacaactttgtttttatctcttcttattggtcaaaaacaat 14914472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 20125433 - 20125392
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  20125433 ttgtcaaaaaattgtaataaagtggttgtacaaatatcattt 20125392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 26626707 - 26626788
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| ||||||||||| ||||||||| |||||||| ||  ||| |||| || | ||||||| ||||||||    
T  26626707 agagcaatgatatttgaacaaccatttgttacaactttcatgacaaccttttttttctcttttgttattggtcaaaaacaat 26626788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 27340913 - 27340872
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||| || ||||||||||||||||||||||||||||    
T  27340913 ttgtcaaaaaattataataaagtgattgtacaaatatcattt 27340872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 33567127 - 33567208
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| || ||||||||||| |||||||||  |||||| ||   ||| ||||||||||||||||| ||||||||    
T  33567127 agagtagtgatatatgaacaaccatttgatacaacttttgtgacaatttcttttttctctcttttcattggtcaaaaacaat 33567208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 33743360 - 33743409
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaaa 227  Q
    |||||||||| ||||||||||||| || |||||||||||||| |||||||    
T  33743360 ttgtcaaaaaattgtaataaagtggttatacaaatatcatttctcttaaa 33743409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 39840736 - 39840777
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  39840736 ttgtcaaaaagttgtaataaagtggttgtacaaatattattt 39840777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 3155184 - 3155108
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||| |||||||||||||| ||| |   |||||||| |||||||||||||||| |||| || | ||||||||||||    
T  3155184 gagtagtgatatttgtacaatcatatatgacaactttaatgacaactttcattttctctattcttattggtccaaaa 3155108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 118
Target Start/End: Complemental strand, 11306882 - 11306798
Alignment:
Q  34 attagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||| ||||||||| ||||| ||||| |||||||||   ||||||||   ||| ||||||||||||||||  ||||||||    
T  11306882 attagagtagtgatatttgaacaactatttgatacaacttttgagacaacttcttttttctctcttttcattggttaaaaacaat 11306798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 13734265 - 13734329
Alignment:
Q  54 acaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||||  |   ||||||||||| ||| ||||||||||||||||| ||||||||    
T  13734265 acaaccatttggtacaatctatttgacaactttccttttctctcttttcattggtcaaaaacaat 13734329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 26627508 - 26627432
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||| ||||||||||||||| |||||||| ||| ||| |||| || | | ||||| ||||||||    
T  26627508 aatgatatttgaacaactatttggtacaactttcatgacaaccttctttttctcttttattaatggtcaaaaacaat 26627432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 31708508 - 31708460
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttg 92  Q
    |||||||||||||||||||||  ||| ||||||| ||||||||||||||    
T  31708508 tgatatttgtacaaccatttgtaacatctttgattacaactttcatttg 31708460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 33037517 - 33037569
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttc 87  Q
    |||||| ||||||||||| ||||||||||  ||||||||| ||||||||||||    
T  33037517 ttagagaaatgatatttgaacaaccattttttacaacttttatgacaactttc 33037569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 582762 - 582837
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaa 117  Q
    ||||||||||| |||| ||||||||||||  ||  ||||||| ||| ||  ||||||||||||||||| |||||||    
T  582762 aatgatatttgaacaatcatttggtacaagatttttgacaaccttctttctctctcttttcattggtcaaaaacaa 582837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 3141678 - 3141608
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaacttt-gatgacaactttcatttgctctcttttcattggt 108  Q
    ||||| ||||||||| ||||||||||  ||||||||| ||||||||||||  ||| ||||||||||||||||    
T  3141678 gagtagtgatatttgaacaaccatttcatacaacttttgatgacaactttttttt-ctctcttttcattggt 3141608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 8787051 - 8787094
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttc 87  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||    
T  8787051 tgatatttgtacaaccatttggtacaacttgtatgacaattttc 8787094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 40566103 - 40566186
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttc-atttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| ||||||||| ||| |||||||  ||||||||  | ||||||||  |||| ||||||||||||||||| ||||||||    
T  40566103 tagagtagtgatatttgaacatccatttgagacaacttttttaacaactttttattttctctcttttcattggtcaaaaacaat 40566186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 18638852 - 18638898
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||||||||| || |||| |||||||||||| ||||    
T  18638852 ttgtcaaaaagttgtaataaaatggttgtgcaaatatcatttctctt 18638898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 21062823 - 21062785
Alignment:
Q  181 tcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  21062823 tcaaaaagttataataaagtgattgtagaaatatcattt 21062785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 31024892 - 31024974
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| |||||| |||||| | ||| |  | |||||||| ||||||||||||||  |||||| |||||||| |||||||||    
T  31024892 tagagtagtgatatatgtacatcaattggtgataactttgacgacaactttcattttttctcttctcattggttcaaaacaat 31024974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 34381188 - 34381114
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||| ||||||||||| || || |||  |||||||||   ||| ||||||||||||||||| ||||||||    
T  34381188 tgatatttgaacaaccatttgatataatttttgtgacaacttcgtttttctctcttttcattggtcaaaaacaat 34381114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 38387894 - 38387848
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaa 82  Q
    ||||| ||||||||||| |||||||||||||||||| || |||||||    
T  38387894 tagagcaatgatatttgaacaaccatttggtacaacctttatgacaa 38387848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 2117528 - 2117609
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| ||||| ||||| |||||||||  |||||||||   ||| |||| |||||||||||  ||||||||    
T  2117528 agagtagtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctcttttttcattggttaaaaacaat 2117609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 6865715 - 6865756
Alignment:
Q  77 tgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||| |||| ||||||||||||||||| ||||||||    
T  6865715 tgacaacttttattttctctcttttcattggtcaaaaacaat 6865756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 7077231 - 7077304
Alignment:
Q  42 aatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||||||||||| ||||||  | ||||||||| ||||||||||  ||| ||||||||| ||||||| ||||    
T  7077231 aatgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggtcaaaaa 7077304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 16292138 - 16292219
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| ||||||||||||    |||||||||| ||||||| | |||| ||| ||||| ||||||| ||||||||    
T  16292138 agagtagtgatatatgtacaaccattgatgacaactttgaagacaactattattttctcgctttttattggtcaaaaacaat 16292219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 18695315 - 18695368
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttc 87  Q
    |||||| |||||||||||||||||||||| || ||||||||  |||||||||||    
T  18695315 ttagagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttc 18695368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 24431645 - 24431686
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||||||||  ||||||| |||||||||||||||||    
T  24431645 ttgtcaaaaagttgtcttaaagtggttgtacaaatatcattt 24431686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 25038269 - 25038192
Alignment:
Q  31 taaattagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggt 108  Q
    |||||| ||||  |||||||||||||||  |||||||||||||| |||| ||||||  |||  |||||||| ||||||    
T  25038269 taaattggagtggtgatatttgtacaactctttggtacaactttcatgataactttagttttatctcttttgattggt 25038192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 31329153 - 31329194
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| |||||||| |||| ||||||||||||    
T  31329153 ttgtcaaaaagttgttataaagtggttgtgcaaatatcattt 31329194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 31708414 - 31708373
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| ||||| || |||||||||||||||||    
T  31708414 ttgtcaaaaagttgttataaaatggttgtacaaatatcattt 31708373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 32732004 - 32732053
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaacttt 86  Q
    |||| ||||||||||| |||||||||||||||||  || |||||||||||    
T  32732004 agagcaatgatatttgaacaaccatttggtacaatctttatgacaacttt 32732053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 34381056 - 34381015
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  34381056 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 34381015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 34952433 - 34952474
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||| |||| |||||||||||||| |||||||||||||||||    
T  34952433 ttgtgaaaatgttgtaataaagtggttgtacaaatatcattt 34952474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 39595316 - 39595275
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  39595316 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 39595275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 12612906 - 12612986
Alignment:
Q  39 agtaatgatatttgtacaacca-tttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||| ||||||| ||||||||||||||   |||||| ||  | | ||||||| ||||||||| ||||||||    
T  12612906 agtaatgatatttgaacaaccattttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaaaaacaat 12612986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 15639569 - 15639497
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggt 108  Q
    ||||| ||||||||||| |||||||||||||||||| ||  ||||||| ||| | | ||| ||| ||||||||    
T  15639569 tagagcaatgatatttgaacaaccatttggtacaacctttttgacaaccttcttcttctcccttctcattggt 15639497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 19376162 - 19376206
Alignment:
Q  181 tcaaaaagttgtaataaagtgattgtacaaatatcatttttctta 225  Q
    |||||||||||| | |||||| ||||||||||||||||| |||||    
T  19376162 tcaaaaagttgtcagaaagtggttgtacaaatatcatttctctta 19376206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 41460302 - 41460218
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggta-caactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||| ||||||| ||||||||||| || ||||||| |||||||| |   ||| ||||||||||||||||  ||||||||    
T  41460302 ttagagcaataatatttgaacaaccatttgctaacaactttcatgacaacctcatttttctctcttttcattggttaaaaacaat 41460218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 10096637 - 10096711
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10096637 tgatatatgtacagccatttggtacaactttgatgacaactttcatttgctctcttctcattggtccaaaacaat 10096711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 17363406 - 17363332
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17363406 tgatatttgtaaaaccattttatacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 17363332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 45274439 - 45274369
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||| |||||||| |||||| |||||||||||||||||| |||||| ||||||||||||||||||||||    
T  45274439 tgatatatgtacaactatttgggacaactttgatgacaactctcattttctctcttttcattggtccaaaa 45274369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 41154212 - 41154134
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||| ||||| |  ||||||||||||||    
T  41154212 tagagtagtgatatatgtacaaccatttgatacaactttgatgacaattttcattggctctttcctcattggtccaaaa 41154134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 29526040 - 29525960
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| |||||| |||||| |||||||||| || |||| |||||||||| ||||| |||||| ||||||||||||||||||    
T  29526040 gagtagtgatatatgtacatccatttggtataattttgttgacaactttaatttgttctcttctcattggtccaaaacaat 29525960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 34114006 - 34114086
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| |||||| ||||||| ||||||| ||||||||||||  ||||||||||| ||||||| | ||||||||||||||||    
T  34114006 gagtagtgatatatgtacaatcatttggaacaactttgatggtaactttcattttctctcttcttattggtccaaaacaat 34114086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 42516694 - 42516644
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaaat 228  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  42516694 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctcttaaat 42516644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 42516810 - 42516736
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||||||||  |||| ||||||||||||||||||||  |||||| |||||||||||| |||||    
T  42516810 tgatatatgtacaaccatttgtgacaattttgatgacaactttcattttttctcttctcattggtccaagacaat 42516736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 17363274 - 17363233
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  17363274 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 17363233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 46567112 - 46567031
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| |||||||||||||||||| |   ||||||| ||| ||| ||||||||||||||||| ||||||||    
T  46567112 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctctcttttcattggtcaaaaacaat 46567031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 33438223 - 33438147
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||  |||||||||||||||||||||  ||| ||| ||||||| ||||||||| ||||||| ||||||||    
T  33438223 aatgatatttaaacaaccatttggtacaacttttttgataaccttcattttctctctttttattggtcaaaaacaat 33438147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 4514183 - 4514234
Alignment:
Q  67 acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  4514183 acaactttgatgacaattttcattttctctcttctcattggtccaaaacaat 4514234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 11063971 - 11064058
Alignment:
Q  31 taaattagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| |||||| ||||||||| ||||||||||   ||||||||| ||||||||||||||| || |||||| || |||| ||||||||    
T  11063971 taaataagagtagtgatatttgaacaaccatttaagacaactttggtgacaactttcattttctttctttttatcggtcaaaaacaat 11064058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 39067849 - 39067924
Alignment:
Q  43 atgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||||| |   |||||||||||||||||||| |||| ||||||||  ||||||||||||||||    
T  39067849 atgatatttgttcaaccatatctaacaactttgatgacaacttttatttactctctttctattggtccaaaacaat 39067924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 10096769 - 10096815
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  10096769 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctctt 10096815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 11012309 - 11012227
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| |||||| ||||||| ||| ||  ||||||||||||||||||||||||| |||| || | |||||||| |||||||    
T  11012309 tagagtagtgatatatgtacaatcatatgtgacaactttgatgacaactttcattttctcttttcttattggtccgaaacaat 11012227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 31275330 - 31275248
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| ||||||||| ||||||||||| |||||||||  |||||| ||   ||| ||||||||||||||||| ||||||||    
T  31275330 tagagtagtgatatttgaacaaccatttgatacaacttttgtgacaatttcttttttctctcttttcattggtcaaaaacaat 31275248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 34260013 - 34259931
Alignment:
Q  34 attagagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaac 115  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||||  ||| ||| ||||||| | ||||||| |||||    
T  34260013 attagagtaatgatatttgtacaaccatttggtgacaacttttgtgacaaacttctttttctctcttcttattggtcaaaaac 34259931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 42882638 - 42882556
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttt-tcattggtccaaaacaat 118  Q
    |||||| |||||| ||||||||||| ||  |||||||||||||||| ||||||||  ||||||| ||||| ||||||||||||    
T  42882638 agagtagtgatatatgtacaaccatgtgtgacaactttgatgacaattttcattttttctctttctcattagtccaaaacaat 42882556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 51296216 - 51296262
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||    
T  51296216 ttgtcaaaaagttgtcataaagtgattgtacaaatatcatttctctt 51296262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 51397898 - 51397944
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  51397898 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctctt 51397944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 12639007 - 12638926
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| ||||| ||||| |||||| |   ||||||| ||||||| ||||||||||||||||| ||||||||    
T  12639007 agagaaatgatatttgaacaactatttgttacaacctatttgacaaccttcattttctctcttttcattggtcaaaaacaat 12638926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 55511042 - 55510961
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| ||||||||||||||||||||   ||| ||||||| ||| |||| |||||| ||||| ||||||||    
T  55511042 agagcaatgatatttgaacaaccatttggtacaacttatttgaaaactttccttttctctattttcaatggtcaaaaacaat 55510961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 5234360 - 5234440
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||| ||||||||||| |||||||||  |||||| |||  ||| ||||||||| ||||||| ||||||||    
T  5234360 gagtagtgatatttgaacaaccatttgatacaacttttgtgacaattttttttttctctctttttattggtcaaaaacaat 5234440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 28676047 - 28676123
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||  |||||||||| ||||||| ||  ||||||| ||| ||| ||||||||||||||||| ||||||||    
T  28676047 aatgatatttaaacaaccattttgtacaacctttttgacaaccttctttttctctcttttcattggtcaaaaacaat 28676123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 46081963 - 46081892
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||| |||||||||||||||     ||||||| ||| | |||||||||||||||||||||| ||||||||||||||    
T  46081963 gagtagtgatatttgtacaac-----ggtacaattttaacgacaactttcatttgctctcttctcattggtccaaaa 46081892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 8906351 - 8906414
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctctt 99  Q
    |||||||||||||| ||||||||||| ||  |||| ||||||||||| |||||||| |||||||    
T  8906351 tagagtaatgatatatgtacaaccatatgtgacaattttgatgacaattttcattttctctctt 8906414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 40308586 - 40308535
Alignment:
Q  67 acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||||||||||||||| | ||||||||| ||||||||||||||||    
T  40308586 acaattttgatgacaactttcatgttctctctttttattggtccaaaacaat 40308535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 40335930 - 40335879
Alignment:
Q  67 acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||||||||||||| ||||||  ||||||||| ||||||||    
T  40335930 acaactttgatgacaactttcattttctctctcctcattggtctaaaacaat 40335879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 22071674 - 22071600
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| ||||||||||||||||||||||   ||||||||||| ||| ||||||| | ||||||  ||||||||    
T  22071674 tgatattagtacaaccatttggtacaacttgtttgacaactttctttttctctcttcttattggttaaaaacaat 22071600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 35332888 - 35332806
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| |||||| ||||| |||||| |  ||||||||||||| |||| | |||| ||||||||||| ||||| ||||||||    
T  35332888 tagagtagtgatatatgtaccaccattggtgacaactttgatgataactattattttctctcttttcactggtcaaaaacaat 35332806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 38844517 - 38844563
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||    
T  38844517 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttttctt 38844563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 55609237 - 55609187
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttc 87  Q
    |||| |||||||||||||||||||||| ||||||||||  |||||||||||    
T  55609237 agagaaatgatatttgtacaaccattttgtacaacttttgtgacaactttc 55609187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 56025440 - 56025358
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||||||||||||  |||||  | ||||||||| |||||||||| |||| ||||||||| ||||||| ||||||||    
T  56025440 agagcaatgatatttgtacattcatttaatgacaactttggtgacaactttgattttctctcttttgattggtcaaaaacaat 56025358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 4489687 - 4489764
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||| |||||| ||||||||  |||||||||||||| ||||||||||| |||| || ||||||  |||||| ||||    
T  4489687 agagtagtgatatatgtacaactctttggtacaactttcatgacaactttaattttctatcttttggttggtcaaaaa 4489764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 25139982 - 25140023
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  25139982 ttgtcaaaaaattgtaataaagtggttgtacaaatatcattt 25140023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 31147275 - 31147234
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  31147275 ttgtcaaaaaattgtaataaagtggttgtacaaatatcattt 31147234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 38961501 - 38961542
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||| ||||||||||||||||||||||| ||||    
T  38961501 ttgtcaaaaagttttaataaagtgattgtacaaatataattt 38961542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 40335833 - 40335792
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  40335833 ttgtcaaaaaattgtaataaaatgattgtacaaatatcattt 40335792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 42915107 - 42915188
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| ||||| ||||| |||||||||  |||||||||   ||| ||||||||||||||||  ||||||||    
T  42915107 agagtagtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaat 42915188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 12241241 - 12241169
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggt 108  Q
    ||||||| |||||||||||||||  ||| ||||||| || |||||||||||  ||| ||||||||| ||||||    
T  12241241 tagagtagtgatatttgtacaactcttttgtacaacctttatgacaactttatttttctctcttttgattggt 12241169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 4896527 - 4896574
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctta 225  Q
    ||||||||||||||| | |||||| ||||||||||||||||| |||||    
T  4896527 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctta 4896574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 9162110 - 9162063
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctta 225  Q
    ||||||||||||||| | ||| |||||||||||||||||||| |||||    
T  9162110 ttgtcaaaaagttgtcacaaaatgattgtacaaatatcatttctctta 9162063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 31147384 - 31147333
Alignment:
Q  67 acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| |||||||||||| |||| ||||||| | ||||||||||||||||    
T  31147384 acaacttcgatgacaacttttattttctctcttcttattggtccaaaacaat 31147333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 50159110 - 50159055
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctctt 99  Q
    |||||||||||||||||| ||  |||||||| ||||||||||| |||| |||||||    
T  50159110 tgatatttgtacaaccatatgtaacaactttaatgacaacttttatttactctctt 50159055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 51389501 - 51389418
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| | ||||||||| ||||||||||| |||||||||  |||||||||   ||| ||||||||||||| ||  ||||||||    
T  51389501 ttagagcagtgatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcattagtaaaaaacaat 51389418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 11997833 - 11997799
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaac 71  Q
    |||||||||||||||| ||||||||||||||||||    
T  11997833 agagtaatgatatttgaacaaccatttggtacaac 11997799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 18874811 - 18874893
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| |||| |||||| | |||||||| |||||||| | | ||| ||||||| ||||||||| ||||||||    
T  18874811 agagcaatgatatttgaacaatcatttgctaacaacttttatgacaacctcctttttctctcttctcattggtcaaaaacaat 18874893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 29525899 - 29525861
Alignment:
Q  181 tcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||||||||||| || |||||||||||||||||    
T  29525899 tcaaaaagttgtaataaaatggttgtacaaatatcattt 29525861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 30778151 - 30778233
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||||| ||||| ||||| || |||||| ||||||| ||   ||| ||||||||| ||||||  ||||||||    
T  30778151 tagagtaatgatatttgaacaactatttgatataacttttatgacaatttcttttttctctctttttattggttaaaaacaat 30778233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 31240832 - 31240750
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaacttt-gatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| ||||||||||  ||||||||| | |||||||||   ||| ||||||||||||||||  ||||||||    
T  31240832 agagtagtgatatttgaacaaccatttcatacaacttttggtgacaacttcttttttctctcttttcattggttaaaaacaat 31240750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 31804215 - 31804273
Alignment:
Q  34 attagagtaatgatatttgtacaaccatttg-gtacaactttgatgacaactttcattt 91  Q
    ||||||||| || ||||| ||||| |||||| | |||||||||||||||||||||||||    
T  31804215 attagagtagtgttatttatacaatcatttgtgaacaactttgatgacaactttcattt 31804273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 39880925 - 39880995
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||| ||||||||  ||| |||||||||| |||||||||||  ||| ||||||||| ||||||| ||||    
T  39880925 tgatatatgtacaactctttcgtacaactttcatgacaactttggttttctctcttttgattggtcaaaaa 39880995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 42510812 - 42510894
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| ||||||||||| | |||||||||||||| || | | ||| |||| |||||||| ||| ||||||||    
T  42510812 agagcaatgatatttgaacaaccatttgctaacaactttgatgacgacctcctttttctctattttcatttgtcaaaaacaat 42510894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 51224725 - 51224807
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||||||| ||||||  | ||||||||| |||||| |||  ||| ||||||||| ||||||| ||||||||    
T  51224725 agagcaatgatatttgtacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaat 51224807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 53356964 - 53357042
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||| |||||| ||||||||  |||||||||||||  ||||||||||| |||  ||||| ||| ||||||| ||||    
T  53356964 tagagtagtgatatatgtacaactctttggtacaacttctatgacaactttgattgtctctcatttgattggtcaaaaa 53357042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 53583155 - 53583201
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| | |||||| ||||||||||||||||| ||||    
T  53583155 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttctctt 53583201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 2812620 - 2812661
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||||||||||||||||| ||||| ||||| |||||    
T  2812620 ttgtcaaaaagttgtaataaagtggttgtataaataccattt 2812661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 11064116 - 11064157
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  11064116 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 11064157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 13267366 - 13267447
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||||| | | ||||  |||||||||||||| ||||||  ||| ||||||| | ||||||| ||||||||    
T  13267366 agagtagtgatatttgtaaatcgatttcatacaactttgatgaaaactttgtttttctctcttcttattggtcaaaaacaat 13267447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 25725721 - 25725762
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  25725721 ttgtcaaaaagttgttagaaagtggttgtacaaatatcattt 25725762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 29384224 - 29384265
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||| ||||| |||| ||||||||||||||||||||||||||    
T  29384224 ttgttaaaaaattgtcataaagtgattgtacaaatatcattt 29384265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 31658094 - 31658021
Alignment:
Q  45 gatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| ||||||||||| |||| ||||  |||||||||   ||| ||| ||||||||||||| ||||||||    
T  31658094 gatatttgaacaaccatttgatacagcttttgtgacaacttcttttttctcacttttcattggtcaaaaacaat 31658021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 33860438 - 33860515
Alignment:
Q  42 aatgatatttgtacaaccatttggta-caactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||||||||| || |||||||||||||||| |   ||| ||||||| | ||||||| ||||||||    
T  33860438 aatgatatttgaacaaccatttgctaacaactttgatgacaacctcatttttctctcttattattggtcaaaaacaat 33860515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 34116567 - 34116608
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  34116567 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 34116608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 37977299 - 37977230
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcatt 105  Q
    ||||| ||||||||||| |||||||||||||||||| ||  |||||| |||   || |||||||||||||    
T  37977299 tagagcaatgatatttgaacaaccatttggtacaacatttttgacaattttttctttctctcttttcatt 37977230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 39881057 - 39881098
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | ||| ||||||||||||||||||||    
T  39881057 ttgtcaaaaagttgttagaaaatgattgtacaaatatcattt 39881098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 40308485 - 40308440
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttct 223  Q
    |||||||||| || | ||||| ||||||||||||||||||||||||    
T  40308485 ttgtcaaaaaattattataaaatgattgtacaaatatcatttttct 40308440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 46173720 - 46173639
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||| | ||||||||| |||||||||  |||||| ||   |||  |||||||||||||||  ||||||||    
T  46173720 agagtaatgatatttgaataaccatttgatacaacttttgtgacaatttcttttttttctcttttcattggtaaaaaacaat 46173639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 46686244 - 46686281
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaacttt 74  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  46686244 agagaaatgatatttgtacaaccattttgtacaacttt 46686281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 46794528 - 46794569
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  46794528 ttgtcaaaaagttgtcagaaagtggttgtacaaatatcattt 46794569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 46911942 - 46911901
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||||||||| |||||||||||    
T  46911942 ttgtcaaaaagttgtgagaaagtgattgtaaaaatatcattt 46911901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 46912826 - 46912867
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||| ||||| ||||||||||||| |||||||||||||||||    
T  46912826 ttgttaaaaaattgtaataaagtggttgtacaaatatcattt 46912867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 47998776 - 47998696
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| |||| |||||| |||||||||  ||| ||||||  ||| || |||||||||||||| ||||||||    
T  47998776 agagtagtgatatttgaacaatcatttgatacaacttttgtgataactttttttt-ctttcttttcattggtcaaaaacaat 47998696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 51389101 - 51389142
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  51389101 ttgtcaaaaagttgttacaaagtggttgtacaaatatcattt 51389142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 51397786 - 51397827
Alignment:
Q  77 tgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| ||||||||||||||  ||||||||||    
T  51397786 tgacaactttcattttctctcttttcattgacccaaaacaat 51397827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 2812522 - 2812558
Alignment:
Q  78 gacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  2812522 gacaactttcattttctctctttttattggtccaaaa 2812558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 7795178 - 7795134
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaacttt 86  Q
    ||||||||||| ||||||||||| |||||| || |||||||||||    
T  7795178 aatgatatttgaacaaccatttgatacaacctttatgacaacttt 7795134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 15596578 - 15596498
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||| ||||||||||   ||||||||  |||||||||   ||| |||  |||||||||||||||||||||    
T  15596578 gagtagtgatatttgaacaaccattttaaacaacttttgtgacaacttcttttttctcatttttcattggtccaaaacaat 15596498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 16508870 - 16508942
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||| |||||| ||||  |||||||||||| |   ||||||| ||||||| ||||||||||||||||| ||||    
T  16508870 aatgctatttgaacaataatttggtacaacctacttgacaaccttcattttctctcttttcattggtcaaaaa 16508942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 19315080 - 19315040
Alignment:
Q  34 attagagtaatgatatttgtacaaccatttggtacaacttt 74  Q
    ||||||||| |||||||||||||||||||||  ||||||||    
T  19315080 attagagtagtgatatttgtacaaccatttgtgacaacttt 19315040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 19899348 - 19899308
Alignment:
Q  184 aaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||| | |||||| ||||||||||||||||||||||    
T  19899348 aaaagttgttaaaaagtggttgtacaaatatcatttttctt 19899308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 27384350 - 27384278
Alignment:
Q  46 atatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||| ||||||  |||| ||||||||||||||| ||||  | | ||||||||||| |||||||||    
T  27384350 atatgtgtacaatcatttgtgacaattttgatgacaacttttattttatattttttcattggttcaaaacaat 27384278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 30973636 - 30973600
Alignment:
Q  183 aaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||| |||||||| |||||||||||||||||    
T  30973636 aaaaagttgtcataaagtggttgtacaaatatcattt 30973600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 38844379 - 38844459
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| |||||| |||||||| ||  ||||||||  |||||||||   ||  ||||||||||||||||| ||||||||    
T  38844379 gagtaatgttatttgaacaaccatatgagacaacttttgtgacaacttattttctctctcttttcattggtcaaaaacaat 38844459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 46912728 - 46912768
Alignment:
Q  78 gacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||| ||||||| | ||||||||||||||||    
T  46912728 gacaactttcattttctctcttcttattggtccaaaacaat 46912768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 54036425 - 54036498
Alignment:
Q  44 tgatatttgtacaaccatttggtacaacttt-gatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||| |||||||||| |||||| ||| | ||||||||||  ||| ||||||||||||||||  ||||||||    
T  54036425 tgatatttgaacaaccattttgtacaatttttggtgacaacttt--ttttctctcttttcattggttaaaaacaat 54036498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 56025250 - 56025305
Alignment:
Q  32 aaattagagtaatgatatttgtacaacca-tttggtacaactttgatgacaactttc 87  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||  |||||||||||    
T  56025250 aaattagagaaatgatatttgtacaaccattttgctacaacttt-ttgacaactttc 56025305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 7e-27; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 34996248 - 34996321
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtcc 110  Q
    |||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34996248 agagtagtgatatatgtacaactatttggtacaactttgatgacaactttcatttgctctcttttcattggtcc 34996321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 6005129 - 6005046
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| |||| ||||||||||||||||||||   ||||||||||| ||| ||||||||||||||||| ||||||||    
T  6005129 ttagagcaatgatgtttgaacaaccatttggtacaacttatttgacaactttccttttctctcttttcattggtcaaaaacaat 6005046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 27631130 - 27631049
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| |||||||||||| |  |||||||||||||||||| | |||| ||||||||||||||||| ||||||||    
T  27631130 agagtagtgatatatgtacaaccattggtgacaactttgatgacaactattattttctctcttttcattggtcaaaaacaat 27631049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 5782966 - 5782890
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| |||||||||||||||||| |   ||||||||||||||| |||||||||||||| || ||||||||    
T  5782966 aatgatatttgaacaaccatttggtacaacctatttgacaactttcattttctctcttttcattgatcaaaaacaat 5782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 11155770 - 11155851
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| |||| |||||||||  |||||||||||||||||||| ||||  ||| |||||||| ||||||||||||    
T  11155770 agagtagtgatatatgtagaaccatttgtgacaactttgatgacaacttttattttttcttttttcattagtccaaaacaat 11155851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 323969 - 324049
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||| ||||||||||| |   |||||||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  323969 gagttatgatatctgtacaaccatatctaacaactttgatgacaacttttatttactctcttcttattggtccaaaacaat 324049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 7129722 - 7129636
Alignment:
Q  31 taaattagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaa 117  Q
    |||| ||||||| |||||||||||||  |||||  |||||||||||||||||||||  ||| ||||||| | ||||||| |||||||    
T  7129722 taaaatagagtagtgatatttgtacattcatttcatacaactttgatgacaactttgtttttctctcttcttattggtcaaaaacaa 7129636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 41304869 - 41304951
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| |||||| |  ||||| |||||  ||||||||| |||||||||| |||| ||||||| ||||||||||||||||||    
T  41304869 tagagtagtgatatattgacaacaatttgtgacaactttgttgacaacttttattttctctcttctcattggtccaaaacaat 41304951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 26871090 - 26871049
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  26871090 ttgtcaaaaagttgtcataaagtgattgtacaaatatcattt 26871049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 40413251 - 40413332
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| ||||||||||| ||||||||| |||| |||||   ||| ||||||||||||| ||| ||||||||    
T  40413251 agagtagtgatatttgaacaaccatttgatacaacttttatgataacttcttttttctctcttttcattagtcaaaaacaat 40413332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 1796661 - 1796585
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||||||||| |||||| |   ||||||| ||| ||| ||||||||||||||||| ||||||||    
T  1796661 aatgatatttgaacaaccatttgttacaacctatttgacaaccttccttttctctcttttcattggtcaaaaacaat 1796585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 3756945 - 3756905
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatt 218  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  3756945 ttgtcaaaaagttgtaataaagtggttgtacaaatatcatt 3756905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 8074614 - 8074694
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| |||||| ||||||| ||| |   ||||||||||||||||||||||||| ||||||| | |||||| |||||||||    
T  8074614 gagtagtgatatatgtacaatcatatttgacaactttgatgacaactttcattttctctcttcttattggttcaaaacaat 8074694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 5642292 - 5642359
Alignment:
Q  51 tgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| |||||  | |||||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  5642292 tgtacaactatttgagataactttgatgacaacttttattttctctcttcttattggtccaaaacaat 5642359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 5644233 - 5644300
Alignment:
Q  51 tgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| |||||  | |||||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  5644233 tgtacaactatttgagataactttgatgacaacttttattttctctcttcttattggtccaaaacaat 5644300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 11180525 - 11180458
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcatt 105  Q
    ||||| |||| | |||||| |||||||||||||||||| |||||||||| ||||| |||||| |||||    
T  11180525 gagtagtgatgtatgtacatccatttggtacaactttggtgacaactttaatttgttctcttctcatt 11180458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 11789955 - 11789892
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctctt 99  Q
    ||||||| ||||||||||||||| |||||  | | |||||||||||||||||||||| ||||||    
T  11789955 tagagtagtgatatttgtacaactatttgtgatatctttgatgacaactttcatttgttctctt 11789892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 21273596 - 21273679
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| ||||||||| ||||| ||||  |||||||||  ||||||||||  ||| ||||||||||||||||  ||||||||    
T  21273596 ttagagtagtgatatttgaacaactatttcatacaacttttgtgacaacttttcttttctctcttttcattggttaaaaacaat 21273679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 34996387 - 34996434
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctta 225  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  34996387 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctta 34996434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 35594696 - 35594653
Alignment:
Q  68 caactttgatgacaactttcatttgctctcttttcattggtcca 111  Q
    |||||||||||||||||||||||| ||||||||| |||||||||    
T  35594696 caactttgatgacaactttcattttctctctttttattggtcca 35594653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 10653678 - 10653752
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||||| |   |||||||||||||||||||| |||| |||  |||  ||||||||||||||||    
T  10653678 tgatatttgtacaaccatatctaacaactttgatgacaacttttatttactcaatttctattggtccaaaacaat 10653752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 154473 - 154392
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| ||||||| ||   |||||| |  ||||||||||||||| ||||||||| ||||||| ||||||||    
T  154473 agagtagtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtcaaaaacaat 154392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 6105463 - 6105508
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttct 223  Q
    ||||||||||||||||| ||| || |||||||||||||||||||||    
T  6105463 ttgtcaaaaagttgtaaaaaaatggttgtacaaatatcatttttct 6105508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 9000898 - 9000983
Alignment:
Q  34 attagagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| ||||||||||| ||||||||||| | |||||||| ||| |||| |   ||| ||||||||||||||||| ||||||||    
T  9000898 attagagcaatgatatttgaacaaccatttgctaacaactttaatgtcaacctcattttactctcttttcattggtcaaaaacaat 9000983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 23258215 - 23258134
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| |||||||||||  |||| |||  |||||||||   ||| ||||||||||||||||| ||||||||    
T  23258215 agagtagtgatatttgaacaaccatttgaaacaatttttgtgacaacttcttttttctctcttttcattggtcaaaaacaat 23258134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 7678914 - 7678834
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| ||||| ||||| |||||||||  | |||||||   ||| ||||||||||||||||  ||||||||    
T  7678914 gagtaatgatatttgaacaactatttgatacaacttttgtaacaacttcttttttctctcttttcattggttaaaaacaat 7678834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 36740490 - 36740414
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||||||||| |||||  |   ||||||| ||||||| |||||||||||||| || ||||||||    
T  36740490 aatgatatttgaacaaccatttgatacaatctatttgacaaccttcattttctctcttttcattgatcaaaaacaat 36740414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 40719533 - 40719609
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||| |||||| ||||||||  ||| |||||||||| |||||||||||  ||| ||||||||| ||||||| ||||    
T  40719533 gagtagtgatatatgtacaactctttcgtacaacttttatgacaactttggttttctctcttttgattggtcaaaaa 40719609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 24503090 - 24503019
Alignment:
Q  47 tatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| | |||||||||  |||||||| ||||||||||   ||| ||||||||||||||||| ||||||||    
T  24503090 tatttgaataaccatttgagacaacttttatgacaacttcatttttctctcttttcattggtcaaaaacaat 24503019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 41305009 - 41305056
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctta 225  Q
    |||||| ||| ||||||||||||| ||||||||||||||||| |||||    
T  41305009 ttgtcataaaattgtaataaagtggttgtacaaatatcatttctctta 41305056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 16699635 - 16699590
Alignment:
Q  42 aatgatatttgtacaaccatttggt-acaactttgatgacaactttc 87  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||    
T  16699635 aatgatatttgtacaaccatttggtaacaactttga-gacaactttc 16699590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 20052981 - 20052947
Alignment:
Q  72 tttgatgacaactttcatttgctctcttttcattg 106  Q
    |||||||||||||||||||| ||||||||||||||    
T  20052981 tttgatgacaactttcattttctctcttttcattg 20052947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 22852866 - 22852916
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaaat 228  Q
    ||||||| ||||||| | |||||| ||||||||||||||||| ||||||||    
T  22852866 ttgtcaagaagttgtcacaaagtggttgtacaaatatcatttctcttaaat 22852916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 30925542 - 30925623
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaacttt-gatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| ||||||||||  ||||||||| | ||||||||||  ||| ||||||||||||||||  ||||||||    
T  30925542 agagtagtgatatttgaacaaccattttatacaacttttggtgacaactttttttt-ctctcttttcattggttaaaaacaat 30925623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 34810534 - 34810608
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||| ||| ||  |||| ||||||||||||| ||| ||||||| |||  || |||||||||||||    
T  34810534 tgatatttgtacaatcatgtgtgacaattttgatgacaactatcagttgctctttttctatcggtccaaaacaat 34810608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 45101440 - 45101394
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| | |||||| ||||||||||||||||| ||||    
T  45101440 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctt 45101394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 102344 - 102425
Alignment:
Q  38 gagtaatgatatttgtacaacca-tttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||||||||||| |||| ||||||||| | | |||| ||| ||| ||| ||| |||| |||| ||||||||    
T  102344 gagtaatgatatttgtacaaccattttgttacaacttttaggccaaccttcttttcctcgcttctcataggtcaaaaacaat 102425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 5642417 - 5642458
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||| |||||||||| |||| ||||||||||||    
T  5642417 ttgtcaaaaagttttaataaagtggttgtccaaatatcattt 5642458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 5644358 - 5644399
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||| |||||||||| |||| ||||||||||||    
T  5644358 ttgtcaaaaagttttaataaagtggttgtccaaatatcattt 5644399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 6849148 - 6849229
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggta-caactttgatgacaactttcatttgctctcttttcattggtccaaaacaa 117  Q
    |||| ||||||||||| ||| ||||||  || ||||||| |||||||||||| ||| |||| |||| ||||||| |||||||    
T  6849148 agagcaatgatatttgaacagccattttctaacaacttttatgacaactttctttttctctttttttattggtcaaaaacaa 6849229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 7596918 - 7596959
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||| ||||||| | ||||||||||||||||||||||||    
T  7596918 ttgtcaagaagttgtcacaaagtgattgtacaaatatcattt 7596959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 12045541 - 12045622
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| |||||||||||||| ||| ||  ||||||| ||| | |  |||||| ||||||||| ||||||||    
T  12045541 agagcaatgatatttgaacaaccatttggtataacctttttgacaaccttcttcttgtctcttctcattggtcaaaaacaat 12045622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 27836224 - 27836183
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  27836224 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 27836183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 30578433 - 30578356
Alignment:
Q  42 aatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||  ||||| | ||||||||||||||||| | | ||| ||||||| ||||||||| ||||||||    
T  30578433 aatgatatttgaacaattatttgctgacaactttgatgacaacctcctttttctctcttatcattggtcaaaaacaat 30578356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 40102067 - 40102026
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  40102067 ttgtcaaaaagttgtgaaaaagtggttgtacaaatatcattt 40102026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 42443289 - 42443208
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| ||||| ||||||||||| |||  ||||||| ||| | | ||| ||| ||||||||| ||||||||    
T  42443289 agagcaatgatatttgaacaactatttggtacaaattttttgacaaccttcttcttctcccttctcattggtcaaaaacaat 42443208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 43602315 - 43602392
Alignment:
Q  42 aatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| ||||||  | ||||||||| ||||||||||  ||  ||||||||| ||||||| ||||||||    
T  43602315 aatgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttttgattggtcaaaaacaat 43602392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 5740806 - 5740850
Alignment:
Q  183 aaaaagttgtaataaagtgattgtacaaatatcatttttcttaaa 227  Q
    |||||||||| | |||||| ||||||||||||||||| |||||||    
T  5740806 aaaaagttgtcaaaaagtggttgtacaaatatcatttctcttaaa 5740850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 9305886 - 9305966
Alignment:
Q  39 agtaatgatatttgtacaa-ccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||||||| |||||||  ||||||||   |||||| || || | |||||||||||||| || ||||||||    
T  9305886 agtaatgatatttgtacaatccatttgagacaacttttgagacaaccttgatattctctcttttcattgatcaaaaacaat 9305966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 9550312 - 9550388
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||| |||||| ||||||||  |||| ||||||||| ||||||||||| |||| || |||||| || |||| ||||    
T  9550312 gagtagtgatatatgtacaactctttgatacaactttcatgacaactttaattttctatcttttgataggtcaaaaa 9550388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 9895186 - 9895118
Alignment:
Q  41 taatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggt 108  Q
    |||||||||||| ||||||||||| | |||||||| |||| ||| | | ||| ||||||||||||||||    
T  9895186 taatgatatttgaacaaccatttgctaacaactttcatgataacctcccttttctctcttttcattggt 9895118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 44607694 - 44607738
Alignment:
Q  31 taaattagagtaatgatatttgtacaaccatttggt-acaacttt 74  Q
    ||||||| || ||||||||||||||||||||||||| ||||||||    
T  44607694 taaattaaagaaatgatatttgtacaaccatttggtgacaacttt 44607738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 50884657 - 50884739
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||||||||    
T  50884657 tagagtagtgatatatgtacaaccatttggtacaactttgatgaaaactttcatttgctatcttctcattagtccaaaacaat 50884739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 4511665 - 4511746
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||  |||||| ||||||||||||||||||    
T  4511665 agagtaatgatatatgtacaaccatttgggacaacttagatgacaactttcattttttctcttctcattggtccaaaacaat 4511746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 30530287 - 30530368
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  30530287 agagtagtgatatatgtacaaccatttgggacaactttgatgacaactttcattttctctcttcttattggtccaaaacaat 30530368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 49596424 - 49596343
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||  || ||||||||||||||||||    
T  49596424 agagtaatgatatatgtacaaccatttggtacaactttgatgataactttaatttgctccattctcattggtccaaaacaat 49596343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 52369001 - 52369080
Alignment:
Q  39 agtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||| |||||||| |||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  52369001 agtagtgatatatgtacaactatttagtacaactttgatgacaactttcatttgctctattctcattggtccaaaacaat 52369080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 33669711 - 33669792
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||  |||||| ||||||||||||||||||    
T  33669711 agagtagtgatatatgtacaaccatttgggacaactttgatgacaactctcattttttctcttctcattggtccaaaacaat 33669792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 8464400 - 8464478
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||| |||||| |||||||||| ||||  |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  8464400 tagagtagtgatatatgtacaaccacttgggccaactttgatgacaactttcattttctctctttttattggtccaaaa 8464478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 50017311 - 50017392
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| ||||||||||||||  ||||||||| ||| |||||||| || ||||||||||||||||||||||||||    
T  50017311 agagtactgatatatgtacaaccatttgagacaactttgttgataactttcaatttctctcttttcattggtccaaaacaat 50017392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 34002209 - 34002289
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| |||||| |||||||| |||||| ||||||||||| ||||||||||||| ||||||| | ||||||||||||||||    
T  34002209 gagtagtgatatatgtacaactatttgggacaactttgatcacaactttcattttctctcttcttattggtccaaaacaat 34002289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 52417714 - 52417633
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| | |||||| |||||| ||||||||||||| ||||||||||| ||||||| | ||||||||||||||||    
T  52417714 agagtagtgatatatatacaactatttggaacaactttgatgataactttcattttctctcttcttattggtccaaaacaat 52417633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 33422107 - 33422188
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| |  |||||||||||  ||||||||| |||||||||| |||| ||||||| ||||||||||||||||||    
T  33422107 agagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtccaaaacaat 33422188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 44112637 - 44112556
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| |  |||||||||||  ||||||||| |||||||||| |||| ||||||| ||||||||||||||||||    
T  44112637 agagtagtgatatattgacaaccatttgtgacaactttgttgacaacttttattttctctcttctcattggtccaaaacaat 44112556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 44730840 - 44730747
Alignment:
Q  24 agacctttaaattagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaa 117  Q
    ||||||||  ||||||| ||||||||||| |||||||||||||||||| ||  ||||||| ||| ||| |||| |||||||||||  |||||||    
T  44730840 agacctttccattagagcaatgatatttgaacaaccatttggtacaacctttttgacaaccttctttttctcttttttcattggttaaaaacaa 44730747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 30530471 - 30530543
Alignment:
Q  46 atatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| |||||||||||||||||| |   ||||||||||| ||| ||||||||||||||||| ||||||||    
T  30530471 atatttgaacaaccatttggtacaacctatttgacaactttccttttctctcttttcattggtcaaaaacaat 30530543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 40139287 - 40139215
Alignment:
Q  46 atatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||||| |||||  |||| |||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  40139287 atatatgtacaactatttgtgacaagtttgatgacaactttcattttctctcttctcatttgtccaaaacaat 40139215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 51339593 - 51339669
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||| |||||||||||| |   ||||||| ||||||| ||||||||||||||||| ||||||||    
T  51339593 aatgatatttgaacaactatttggtacaacctatttgacaaccttcattttctctcttttcattggtcaaaaacaat 51339669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 15059793 - 15059726
Alignment:
Q  51 tgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| ||||||| |||| ||||||||||| |||||||| ||||||| ||||| ||||||||||||    
T  15059793 tgtacaatcatttgggacaattttgatgacaattttcattttctctcttctcatttgtccaaaacaat 15059726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 21154405 - 21154354
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcat 89  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||||||||||    
T  21154405 gagtagtgatatatgtacaaccatttgatacaactttgatgacaactttcat 21154354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 5975713 - 5975639
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||||| |   |||||||| ||||||||||| |||| ||||||||  ||||||||||||||||    
T  5975713 tgatatttgtacaaccatatctaacaactttaatgacaacttttatttactctctttctattggtccaaaacaat 5975639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 25098684 - 25098757
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| |||||||||||||||||| |   ||||||| ||| ||| ||||||||||||||||| ||||||||    
T  25098684 aatgatatttgaacaaccatttggtacaacct---tgacaaccttccttttctctcttttcattggtcaaaaacaat 25098757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 48576400 - 48576474
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| || ||  |||||||| ||||||||| |||| ||||||||||  ||||||||||||||||    
T  48576400 tgatatttgtacaactatgtgtgacaacttttatgacaactatcatgtgctctctttctattggtccaaaacaat 48576474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 8464540 - 8464581
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  8464540 ttgtcaaaaagttgtaataaagtggttgtacaaatatcattt 8464581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 21255669 - 21255754
Alignment:
Q  34 attagagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| ||||||||||| ||||||||||| | |||||||| |||||||| | | ||| ||||||| ||||||||| ||||||||    
T  21255669 attagagcaatgatatttgaacaaccatttgctaacaacttttatgacaacctcctttttctctcttctcattggtcaaaaacaat 21255754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 36930644 - 36930725
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| |||||||||| ||||||| ||  ||||||| ||| ||| ||||||||| ||||||| ||||||||    
T  36930644 agagcaatgatatttgaacaaccattttgtacaacctttttgacaaccttctttttctctctttttattggtcaaaaacaat 36930725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 40605304 - 40605381
Alignment:
Q  33 aattagagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtc 109  Q
    |||||||| ||||||||||| ||||||||||| | |||||||| |||||||| ||| ||| ||||||| |||||||||    
T  40605304 aattagagcaatgatatttgaacaaccatttgctaacaacttttatgacaaccttctttttctctcttctcattggtc 40605381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 44112498 - 44112449
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaaa 227  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||||    
T  44112498 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctcttaaa 44112449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 45470743 - 45470808
Alignment:
Q  53 tacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| | ||||||||| ||||||||||||| ||||||| | ||||||||||||||||    
T  45470743 tacaactatttggaaaaactttgatcacaactttcattttctctcttcttattggtccaaaacaat 45470808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 48872562 - 48872481
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| ||||||||||| |||||| |   ||||||| ||| ||| ||||||||||||||||| ||||||||    
T  48872562 agagcaatgatatttgaacaaccatttgatacaacctatttgacaaccttccttttctctcttttcattggtcaaaaacaat 48872481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 4604707 - 4604631
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||| |||||||||||| |   ||||||| ||| ||| ||||||||||||||||| ||||||||    
T  4604707 aatgatatttgaacaacgatttggtacaacctgtttgacaaccttctttttctctcttttcattggtcaaaaacaat 4604631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 32821813 - 32821737
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||||||||| || |||||   ||||||| ||||||| ||||||||||||||||  ||||||||    
T  32821813 aatgatatttgaacaaccatttgataaaacttatttgacaacattcattttctctcttttcattggtaaaaaacaat 32821737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 24775019 - 24774972
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctta 225  Q
    |||||||||||||||||||||||| |||| |||||||||||| |||||    
T  24775019 ttgtcaaaaagttgtaataaagtggttgttcaaatatcatttctctta 24774972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 24612020 - 24611946
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||||| |   |||||||||||||||||||| ||||  ||  |||| ||||||||||||||||    
T  24612020 tgatatttgtacaaccatatctaacaactttgatgacaacttttatttattcaatttttattggtccaaaacaat 24611946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 1724122 - 1724203
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||||||||||||| |   |||||||||||  ||||||| |||| |||||||   ||||||||||||||||    
T  1724122 agagttatgatatttgtacaaccatatctaacaactttgatcgcaacttttatttactctcttcctattggtccaaaacaat 1724203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 5315394 - 5315313
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| || ||| |||||||||||||   |||||||||||||| |||||||||| |||| || | |||||| |||||||||    
T  5315394 agagtagtgctatatgtacaaccattttagacaactttgatgacgactttcattttctcttttcttattggttcaaaacaat 5315313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 11068469 - 11068428
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  11068469 ttgtcaaaaaattgtaataaagtggttgtacaaatatcattt 11068428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 22389414 - 22389490
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||||||||||||| ||||||||||| | |||||||  |||||||||   ||| ||||||||||||||||| ||||    
T  22389414 agagtaatgatatttgaacaaccatttgat-caacttttgtgacaacttcttttttctctcttttcattggtcaaaaa 22389490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 24775158 - 24775077
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| |  ||||||||||   ||||||||| |||||| ||| |||| ||||||| ||||||||||||||||||    
T  24775158 agagtagtgatatattgacaaccatttttgacaactttgttgacaatttttattttctctcttctcattggtccaaaacaat 24775077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 27352813 - 27352732
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| |||||||||||||||||| |    |||||| ||  ||| ||||||||||||||||| ||||||||    
T  27352813 agagcaatgatatttgaacaaccatttggtacaacctattcgacaacctttcttttctctcttttcattggtcaaaaacaat 27352732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 30530426 - 30530467
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  30530426 ttgttaaaaagttgtaataaagtggttgtacaaatatcattt 30530467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 33422246 - 33422287
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  33422246 ttgtcaaaaagttgtaataaagtggttgtacagatatcattt 33422287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 34002347 - 34002388
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  34002347 ttgttaaaaagttgtaataaagtggttgtacaaatatcattt 34002388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 41558176 - 41558095
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||||||||||||||||||  |||||| |  ||||||||||| ||| || |||| | ||||||| ||||||||    
T  41558176 agagtagtgatatttgtacaaccatttgtgacaactattgtgacaactttccttttctttcttcttattggtcaaaaacaat 41558095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 43640879 - 43640956
Alignment:
Q  42 aatgatatttgtacaaccatttggta-caactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||||||||| || ||||||| |||||||| |   ||| ||||||||||||||||| ||||||||    
T  43640879 aatgatatttgaacaaccatttgctaacaactttcatgacaacctcatttttctctcttttcattggtcaaaaacaat 43640956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 44641791 - 44641868
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||| |||||| |  |||||||||||  | ||||||| |||||||||| |||| ||||||| ||||||||||||||    
T  44641791 agagtagtgatatattgacaaccatttgtgataactttgttgacaacttttattttctctcttctcattggtccaaaa 44641868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 44641930 - 44641971
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  44641930 ttgtcaaaaaattgtaataaagtggttgtacaaatatcattt 44641971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 47059782 - 47059859
Alignment:
Q  42 aatgatatttgtacaaccatttggta-caactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||||||||| || ||||||| |||||||  ||  ||| ||||||||||||||||| ||||||||    
T  47059782 aatgatatttgaacaaccatttgctaacaactttcatgacaatcttatttttctctcttttcattggtcaaaaacaat 47059859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 49589995 - 49590036
Alignment:
Q  183 aaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  49589995 aaaaagttgtaataaagtggttgtacaaatatcatttctctt 49590036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 49621544 - 49621463
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| |||||||||||||||||  |   ||||||  ||||||| ||||||||| ||||||| ||||||||    
T  49621544 agagcaatgatatttgaacaaccatttggtacaatctatttgacaatcttcattttctctctttttattggtcaaaaacaat 49621463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 6841973 - 6841893
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||| ||||| ||||   |||||| | |||||||||||| ||| ||||||||| ||||||| ||||||||    
T  6841973 gagtactgatatttgaacaactatttttgacaactatcatgacaactttctttttctctctttttattggtcaaaaacaat 6841893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 38233455 - 38233375
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||||||||||| |   |||| ||| ||||||||||| |||| |||||||   ||||||||||||||||    
T  38233455 gagttatgatatttgtacaaccatatctaacaattttaatgacaacttttatttactctcttcctattggtccaaaacaat 38233375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 118
Target Start/End: Complemental strand, 39011000 - 39010916
Alignment:
Q  34 attagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||| || |||||| |||||||| ||  ||||||||  |||||||||   ||| ||||||||||||||||| ||||||||    
T  39011000 attagagtagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttttctctcttttcattggtcaaaaacaat 39010916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 51250180 - 51250260
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| |||||| ||||||| ||||||  | |||||||||||||||||| |||| ||||||| | |||| || ||||||||    
T  51250180 gagtactgatatatgtacaatcatttgaaataactttgatgacaacttttattttctctcttcttattgatctaaaacaat 51250260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 52417575 - 52417531
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttc 222  Q
    |||||||||||||||||||||||  |||| |||||||||||||||    
T  52417575 ttgtcaaaaagttgtaataaagtagttgtccaaatatcatttttc 52417531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 25061918 - 25061835
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||||| ||||||||||| |||||  |   ||||||| ||| ||| ||||||||||||||||  ||||||||    
T  25061918 ttagagcaatgatatttgaacaaccatttgatacaatctatttgacaaccttctttttctctcttttcattggttaaaaacaat 25061835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 42792452 - 42792385
Alignment:
Q  51 tgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| |||||  ||||||||||||||||| ||| ||||  |||||||| |||| |||||||||||    
T  42792452 tgtacaatcattttatacaactttgatgacaatttttatttattctctttttattgatccaaaacaat 42792385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 49453660 - 49453582
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| ||||| ||||| |||||||||  ||||||||||   || ||||||||||||||||  ||||||||    
T  49453660 agagtagtgatatttgaacaactatttgatacaacttttgtgacaacttt---tttctctcttttcattggttaaaaacaat 49453582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 50226906 - 50226953
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctta 225  Q
    ||||||||||||||| | |||||| ||||||||||||||||| |||||    
T  50226906 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctta 50226953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 52078597 - 52078542
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctctt 99  Q
    |||||| |||||||| |||| | ||||||||||||| ||||||||||| |||||||    
T  52078597 tgatatatgtacaactattttgaacaactttgatgataactttcattttctctctt 52078542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 4154758 - 4154684
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||| ||| |   |||||||| |||| |||||| |||| ||||||| | ||||||||||||||||    
T  4154758 tgatatttgtacaaacatatctaacaactttaatgataacttttatttactctcttcttattggtccaaaacaat 4154684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 5043229 - 5043195
Alignment:
Q  39 agtaatgatatttgtacaaccatttggtacaactt 73  Q
    |||||||||||||| ||||||||||||||||||||    
T  5043229 agtaatgatatttgaacaaccatttggtacaactt 5043195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 32811759 - 32811829
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||||||||||||  ||| |||||||||| |||||||||||  ||| ||||| ||| ||||||| ||||    
T  32811759 tgatatttgtacaactctttagtacaactttaatgacaactttggttttctctcatttgattggtcaaaaa 32811829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 38019398 - 38019467
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||| ||| |||| || | ||||||| ||||    
T  38019398 tgatatttgaacaaccatttggtacaa-tttgatgacaaccttctttttctcttttgttattggtcaaaaa 38019467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 40595941 - 40596023
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||||| ||||||||||| |||||| ||  ||||||   |  ||| ||||||||||||||||| ||||||||    
T  40595941 tagagcaatgatatttgaacaaccatttgatacaacctttttgacaataatttttttctctcttttcattggtcaaaaacaat 40596023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 44672057 - 44672103
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| | ||| |||||||||||||||||||| ||||    
T  44672057 ttgtcaaaaagttgttaaaaaatgattgtacaaatatcatttctctt 44672103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 48872423 - 48872377
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| ||||    
T  48872423 ttgtctaaaagttgtcataaagtggttgtacaaatatcatttctctt 48872377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 49596279 - 49596233
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    |||||||||| |||||||||| || ||||||||||||||||| ||||    
T  49596279 ttgtcaaaaaattgtaataaaatggttgtacaaatatcatttctctt 49596233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 52369138 - 52369184
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||| |||||||||  ||||||||||||||||| ||||    
T  52369138 ttgtcaaaaagttataataaagtagttgtacaaatatcatttatctt 52369184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 366840 - 366759
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||| |||||| |||||||  ||  |||||||   ||||||||||  ||| ||||||||||||||||| ||||||||    
T  366840 agagtaatgttatttgaacaaccaaatgagacaacttatgtgacaacttttttttcctctcttttcattggtcaaaaacaat 366759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 5383945 - 5383872
Alignment:
Q  35 ttagagtaatgatatttgtacaaccattt-ggtacaactttgatgacaactttcatttgctctcttttcattgg 107  Q
    |||||| ||||||||||||||| ||||||   |||||||||| ||||||||||  ||| ||||||||| |||||    
T  5383945 ttagagcaatgatatttgtacatccatttaattacaactttggtgacaactttgtttttctctcttttgattgg 5383872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 8934422 - 8934503
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| |||||||||||  |||| ||  |||||||||||| ||| |||| || | ||||||| ||||||||    
T  8934422 agagtagtgatatttgaacaaccatttgtgacaatttctatgacaactttctttttctcttttcttattggtcaaaaacaat 8934503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 10426916 - 10426835
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctc-ttttcattggtccaaaacaa 117  Q
    |||||| |||||||||||||||||| ||  |||||||| |||||||| ||  ||| ||||| |||| ||||||| |||||||    
T  10426916 agagtagtgatatttgtacaaccatgtgtgacaacttttatgacaaccttacttttctctcttttttattggtcgaaaacaa 10426835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 11570251 - 11570328
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||| |||||| ||||||||  ||| |||||||||| |||||||||||  | | ||||||||| ||||||| ||||    
T  11570251 agagtagtgatatatgtacaactctttcgtacaactttcatgacaacttttgtcttctctcttttgattggtcaaaaa 11570328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 16987626 - 16987549
Alignment:
Q  42 aatgatatttgtacaaccatttggta-caactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||||||||| || ||| ||  |||||||| | | ||| ||||||||||||||||| ||||||||    
T  16987626 aatgatatttgaacaaccatttgctaacaatttctatgacaacctcctttttctctcttttcattggtcaaaaacaat 16987549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 28253059 - 28253018
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  28253059 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcattt 28253018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 30687242 - 30687189
Alignment:
Q  30 ttaaattagagtaatgatatttgtacaaccatttggtacaactttgatgacaac 83  Q
    |||||| |||| ||||||||||| ||||||||||||||||| |||  |||||||    
T  30687242 ttaaataagagcaatgatatttgaacaaccatttggtacaaattttttgacaac 30687189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 31436864 - 31436823
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  31436864 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcattt 31436823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 33694234 - 33694275
Alignment:
Q  184 aaaagttgtaataaagtgattgtacaaatatcatttttctta 225  Q
    ||||||||| | |||||||||||||||||||||||| |||||    
T  33694234 aaaagttgttaaaaagtgattgtacaaatatcatttctctta 33694275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 45470867 - 45470908
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||| ||||||||| ||| |||||||||||||||||    
T  45470867 ttgtcaaaaaattgtaataaggtggttgtacaaatatcattt 45470908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 49189103 - 49189180
Alignment:
Q  42 aatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| ||||||  | ||||||||| |||||| |||  ||| ||||||||| ||||||| ||||||||    
T  49189103 aatgatatttgtacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaat 49189180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 50017450 - 50017491
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||||||||| |  |||||||||||||||||    
T  50017450 ttgtcaaaaagttgtaataaaattgttgtacaaatatcattt 50017491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 50118923 - 50118964
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||||||||||||||||| || || |||||||||||    
T  50118923 ttgtcaaaaagttgtaataaagtggttatataaatatcattt 50118964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 50527945 - 50528026
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||| ||||||| ||||||||||| |||||  |   ||||||| ||| ||| ||||||||||||||||| ||||||||    
T  50527945 agagcaatcatatttgaacaaccatttgctacaatctatttgacaaccttctttttctctcttttcattggtcaaaaacaat 50528026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 7648439 - 7648407
Alignment:
Q  31 taaattagagtaatgatatttgtacaaccattt 63  Q
    |||||||||||||||||||||| ||||||||||    
T  7648439 taaattagagtaatgatatttgaacaaccattt 7648407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 40610411 - 40610331
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||| ||| |||||||  ||||||||  |||||||||   ||  ||||||||||||||||| ||||||||    
T  40610411 gagtagtgatatttgaacatccatttgagacaacttttgtgacaacttcttttctctctcttttcattggtcaaaaacaat 40610331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 44950306 - 44950390
Alignment:
Q  34 attagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||  ||||||||||||||| || ||  |||| ||| ||||||||||| |||| |||||||   |||| |||||||||||    
T  44950306 attagagttgtgatatttgtacaactatatgtaacaattttaatgacaacttttatttactctcttcctattgatccaaaacaat 44950390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 156089 - 156008
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| ||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  156089 agagtagtgatatatgtacaaccatttgggacaactttgatgacaactctcattttctctcttctcattggtccaaaacaat 156008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 155950 - 155909
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  155950 ttgtcaaaaagttgtaataaaatggttgtacaaatatcattt 155909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 36186782 - 36186863
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||| |||||||||||| || |||||||||    
T  36186782 agagtaatgatatatgtacaaccatttggtataactttgatgacaacttttatttgttctcttttcattagtacaaaacaat 36186863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 30391328 - 30391248
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| |||||| ||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  30391328 gagtagtgatatatgtacaatcatttggtacaactttgatgacaacttttatttactctcttctcattggtccaaaacaat 30391248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 47644891 - 47644811
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| |||||| |||||||  |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47644891 gagtagtgatatatgtacaattatttggtataactttgatgacaactttcatttgctctcttctcattggtccaaaacaat 47644811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 17500882 - 17500799
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||| ||||||||||| ||||||| | ||||||||||||||||    
T  17500882 ttagagtagtgatatatgtacaaccatttgggacaactttgatgataactttcattttctctcttcttattggtccaaaacaat 17500799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 17552332 - 17552415
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||| ||||||||||| ||||||| | ||||||||||||||||    
T  17552332 ttagagtagtgatatatgtacaaccatttgggacaactttgatgataactttcattttctctcttcttattggtccaaaacaat 17552415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 27070556 - 27070638
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| |||||| ||| ||| ||||||| |||||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  27070556 tagagtagtgatatatgtgcaatcatttgggacaactttgatgacaactctcattttctctcttctcattggtccaaaacaat 27070638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 27207757 - 27207675
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| |||||| ||| ||| ||||||| |||||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  27207757 tagagtagtgatatatgtgcaatcatttgggacaactttgatgacaactctcattttctctcttctcattggtccaaaacaat 27207675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 49089053 - 49089129
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||| |||||| |||||||| ||||   ||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  49089053 gagtagtgatatatgtacaacaatttctgacaactttgatgacaactttcattttctctcttctcattggtccaaaa 49089129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 5724219 - 5724140
Alignment:
Q  39 agtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||| |||||||||||||   |||| || |||||||||||| |||| ||||||||||||||||||||||||||    
T  5724219 agtagtgatatatgtacaaccatttaagacaaattggatgacaacttttattttctctcttttcattggtccaaaacaat 5724140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 21153237 - 21153158
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||||| |||||| ||||||||  |||||||||||||| ||||||||||| |||| ||||||||| ||||||| ||||    
T  21153237 ttagagtagtgatatatgtacaactttttggtacaactttcatgacaactttgattttctctcttttgattggtcaaaaa 21153158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 16567467 - 16567402
Alignment:
Q  53 tacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||||| |||| |||||||||| |||||  ||||||||||||||||||||||||    
T  16567467 tacatccatttggtacaattttgttgacaactttaatttgtactcttttcattggtccaaaacaat 16567402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 16598195 - 16598260
Alignment:
Q  53 tacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||||| |||| |||||||||| |||||  ||||||||||||||||||||||||    
T  16598195 tacatccatttggtacaattttgttgacaactttaatttgtactcttttcattggtccaaaacaat 16598260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 24267535 - 24267616
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||||||||||||| |   |||||||||||||||||||| |||| |||| |||  ||||||||||||||||    
T  24267535 agagttatgatatttgtacaaccatatctaacaactttgatgacaacttttatttactctttttctattggtccaaaacaat 24267616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 31436599 - 31436523
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||| |||||| |||||||||||||| ||||| ||||||||||||||||||||  |||||| ||||||||| ||||    
T  31436599 agagtagtgatatatgtacaaccatttgatacaa-tttgatgacaactttcattttatctcttctcattggtctaaaa 31436523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 12142066 - 12141986
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||| ||||||||||| |||||||||  ||||||||||  ||| || |||||||||||||| ||||||||    
T  12142066 gagtagtgatatttgaacaaccatttgatacaacttttgtgacaactttttttttctttcttttcattggtcaaaaacaat 12141986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 8792488 - 8792566
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||| ||||||||||| |||||||||  |||||||||   ||| ||||||||||||| ||| ||||||||    
T  8792488 agagtaatgatatttgaacaaccatttgatacaacttttgtgacaactt---ttttctctcttttcattagtcaaaaacaat 8792566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 25940555 - 25940636
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| ||||| |||||||||||  |   ||||||| ||||||| ||||||||||||||||| ||||||||    
T  25940555 agagcaatgatatttgaacaactatttggtacaatctatttgacaaccttcattttctctcttttcattggtcaaaaacaat 25940636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 4678249 - 4678165
Alignment:
Q  35 ttagagtaatgatatttgtacaaccatttggta-caactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||||  ||||||||||| || |||||||||||||||| | | ||| |||| |||||||||||| ||||||||    
T  4678249 ttagagcaatgatatttaaacaaccatttgctaacaactttgatgacaacctcctttttctctattttcattggtcaaaaacaat 4678165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 5978761 - 5978681
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||| ||||||||| |||||||| || ||||||| |  |||||||||  |||| ||||||||||||||||| ||||||||    
T  5978761 gagtagtgatatttgaacaaccatatgatacaactcttgtgacaacttctattttctctcttttcattggtcaaaaacaat 5978681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 18157078 - 18157154
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||| |||||||||||| |   ||||||| ||| ||| ||||||||||||||||| ||||||||    
T  18157078 aatgatatttgaacaactatttggtacaacctatttgacaaccttccttttctctcttttcattggtcaaaaacaat 18157154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 9031391 - 9031313
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||| ||||||||||| |||||||||||||||||  |   ||||||| ||||||| ||||||||| ||||||| ||||    
T  9031391 tagagcaatgatatttgaacaaccatttggtacaatctatttgacaaccttcattttctctctttttattggtcaaaaa 9031313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 10014839 - 10014924
Alignment:
Q  34 attagagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||| ||||||||||||| ||| ||| | ||||||||| |||||| |||  ||| ||||||||| ||||||| ||||||||    
T  10014839 attagagtagtgatatttgtacatccaattgatgacaactttggtgacaattttgtttttctctctttttattggtcaaaaacaat 10014924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 17500741 - 17500700
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  17500741 ttgtcaaaaagttataataaagtggttgtacaaatatcattt 17500700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 17552473 - 17552514
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  17552473 ttgtcaaaaagttataataaagtggttgtacaaatatcattt 17552514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 21752702 - 21752661
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
T  21752702 ttgtcaaaaagttgtgagaaagtgattgtacaaatatcattt 21752661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 36920968 - 36920891
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||||| |||||| ||||||||  |||||||||||||| || |||||||| |||| ||||| ||| ||||||| ||||    
T  36920968 agagtagtgatatatgtacaactctttggtacaacttttattacaactttgattttctctcatttgattggtcaaaaa 36920891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 45981305 - 45981386
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||| |||||||| |||    | |||||||||||||||||| | || ||||||||||||| || |||||||||    
T  45981305 agagtaatgatatatgtacaactattaatgataactttgatgacaacttttactttctctcttttcattagttcaaaacaat 45981386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 46651855 - 46651774
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| |||||||| || ||||| | |  |||||||||  |||| ||||||||||||||||| ||||||||    
T  46651855 agagtagtgatatttgaacaaccatatgatacaattcttgtgacaacttctattttctctcttttcattggtcaaaaacaat 46651774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 5724082 - 5724042
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatt 218  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  5724082 ttgttaaaaagttgtaataaagtggttgtacaaatatcatt 5724042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 27070701 - 27070741
Alignment:
Q  184 aaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| |||||||||||||||||||| ||||    
T  27070701 aaaagttgtaataaaatgattgtacaaatatcatttctctt 27070741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 27207612 - 27207572
Alignment:
Q  184 aaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| |||||||||||||||||||| ||||    
T  27207612 aaaagttgtaataaaatgattgtacaaatatcatttctctt 27207572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 27688815 - 27688739
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||||  |||||||||||  |   ||||||| ||| ||| ||||||||||||||||| ||||||||    
T  27688815 aatgatatttgtacaattatttggtacaatctatttgacaaccttccttttctctcttttcattggtcaaaaacaat 27688739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 43107790 - 43107714
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| |||||||||||||||||| |   | ||||| ||| ||| || |||||||||||||| ||||||||    
T  43107790 aatgatatttgaacaaccatttggtacaacctatttaacaaccttccttttctttcttttcattggtcaaaaacaat 43107714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 44196110 - 44196182
Alignment:
Q  46 atatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||| || |   |||||||||||||||||||| |||| | ||||||  ||||||||||||||||    
T  44196110 atatttgtacaactatatctaacaactttgatgacaacttttatttacgctctttctattggtccaaaacaat 44196182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 2469875 - 2469804
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggt 108  Q
    |||| ||||||||||| |||||||||||||||||| |   ||||||| ||| ||| |||| |||||||||||    
T  2469875 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctctattttcattggt 2469804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 7807238 - 7807158
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaacttt-gatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| ||||||||||  ||||||||| |||||||||||   ||| ||||||||||||||||  ||||||||    
T  7807238 agagtagtgatatttgaacaaccatttcatacaacttttgatgacaacttc--ttttctctcttttcattggttaaaaacaat 7807158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 35072133 - 35072204
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggt 108  Q
    |||| ||||||||||| ||||| |||||||||||| ||  ||||||  ||||||| ||||||| ||||||||    
T  35072133 agagcaatgatatttgaacaactatttggtacaacctttttgacaatcttcattttctctcttctcattggt 35072204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 16567360 - 16567314
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||| ||||||| || ||||||||||||||||| ||||    
T  16567360 ttgtcaaaaagttataataaaatggttgtacaaatatcatttctctt 16567314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 16598302 - 16598348
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||| ||||||| || ||||||||||||||||| ||||    
T  16598302 ttgtcaaaaagttataataaaatggttgtacaaatatcatttctctt 16598348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 28824547 - 28824501
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| | |||||| ||||||||||||||||| ||||    
T  28824547 ttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctctt 28824501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 31009535 - 31009609
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||||| |   ||||||||  |||||||||| |||| |||||||   ||||||||||||||||    
T  31009535 tgatatttgtacaaccatatctaacaactttagtgacaacttttatttactctcttcctattggtccaaaacaat 31009609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 37392227 - 37392145
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggta-caactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| ||||||||||| || ||||||| |||||||| |   ||| ||||||||||||||||  ||||||||    
T  37392227 agagcaatgatatttgaacaaccatttgctaacaactttcatgacaacctcatttttctctcttttcattggttaaaaacaat 37392145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 47644749 - 47644703
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    |||||||||| || |||||||||| ||||||||||||||||| ||||    
T  47644749 ttgtcaaaaaattataataaagtggttgtacaaatatcatttatctt 47644703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 27075647 - 27075574
Alignment:
Q  41 taatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||||| ||||||||  |||||||||||||| |||| || |||  ||| ||||||||| ||||||| ||||    
T  27075647 taatgatatatgtacaactctttggtacaacttttatgataattttggttttctctcttttgattggtcaaaaa 27075574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 27202664 - 27202737
Alignment:
Q  41 taatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||||| ||||||||  |||||||||||||| |||| || |||  ||| ||||||||| ||||||| ||||    
T  27202664 taatgatatatgtacaactctttggtacaacttttatgataattttggttttctctcttttgattggtcaaaaa 27202737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 31364911 - 31364952
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||| ||||||||||||| | |||||||||||||||    
T  31364911 ttgtcaaaaaattgtaataaagtggtcgtacaaatatcattt 31364952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 35098475 - 35098556
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||| ||| ||||| |||||||||||| ||  ||||||  ||||||| ||||||| ||||||||  ||||||||    
T  35098475 agagcaatgataattgaacaactatttggtacaacctttttgacaatcttcattttctctcttctcattggtaaaaaacaat 35098556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 39137152 - 39137197
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaa 82  Q
    |||| ||||||||||| ||| ||||||||||||||||| |||||||    
T  39137152 agagaaatgatatttgaacatccatttggtacaacttttatgacaa 39137197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 63
Target Start/End: Complemental strand, 41910260 - 41910231
Alignment:
Q  34 attagagtaatgatatttgtacaaccattt 63  Q
    ||||||||||||||||||||||||||||||    
T  41910260 attagagtaatgatatttgtacaaccattt 41910231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 46148345 - 46148268
Alignment:
Q  42 aatgatatttgtacaaccatttggta-caactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| ||||||||||| || ||||||| || ||||| ||  ||  ||||||||||||||||| ||||||||    
T  46148345 aatgatatttgaacaaccatttgttaacaactttcataacaaccttatttctctctcttttcattggtcaaaaacaat 46148268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 9363425 - 9363385
Alignment:
Q  184 aaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||| ||||| |||||||||||||||||||| ||||    
T  9363425 aaaagttgttataaaatgattgtacaaatatcatttctctt 9363385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 18505811 - 18505771
Alignment:
Q  184 aaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||| ||| |||| ||||||||||||||||||||    
T  18505811 aaaagttgtaaaaaaatgatcgtacaaatatcatttttctt 18505771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 30180555 - 30180515
Alignment:
Q  185 aaagttgtaataaagtgattgtacaaatatcatttttctta 225  Q
    |||||||| | |||||| |||||||||||||||||||||||    
T  30180555 aaagttgtgacaaagtggttgtacaaatatcatttttctta 30180515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 33212208 - 33212132
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||| |||||| ||||||||  |||||||||||||  ||||||||||| |||  ||||| ||| ||||||| ||||    
T  33212208 gagtagtgatatatgtacaactctttggtacaacttctatgacaactttaattgtctctcatttgattggtcaaaaa 33212132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 42641017 - 42640949
Alignment:
Q  46 atatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    |||| ||||||||  |||||||||||||| |||| |||||| |||| |||| |||| ||||||| ||||    
T  42641017 atatatgtacaactctttggtacaacttttatgataactttgattttctcttttttgattggtcaaaaa 42640949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 43444794 - 43444730
Alignment:
Q  54 acaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||||| |   ||||||| ||||||| ||| ||||||||||||  ||||||||    
T  43444794 acaaccatttggtacaacctatttgacaaccttcattttctcccttttcattggtaaaaaacaat 43444730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 44817832 - 44817792
Alignment:
Q  78 gacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||| | ||||| ||||||||||||||||||    
T  44817832 gacaactttcattttcgctcttctcattggtccaaaacaat 44817792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 49089185 - 49089221
Alignment:
Q  183 aaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  49089185 aaaaagttgtaataaagtggttgtacaaataacattt 49089221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 29720 - 29779
Alignment:
Q  59 catttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29720 catttgggacaactttgatgacaactttcattttctctcttttcattggtccaaaacaat 29779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 3821597 - 3821506
Alignment:
Q  27 cctttaaattagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||| |||||| ||||||  ||||||||| |||||||||||||| ||| ||||| |||||| |||||| |||||||||||    
T  3821597 cctttaaattagagtagtgatatatgtacattcatttggtataactttgatgacaatttttatttgttctcttctcattgatccaaaacaat 3821506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 19788963 - 19789041
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||| |||||| ||||||||||||||| |||||||||||||||||| | |||| ||||||| ||||||||||||||    
T  19788963 tagagtagtgatatatgtacaaccatttgggacaactttgatgacaactctgattttctctcttctcattggtccaaaa 19789041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 28647322 - 28647400
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||||| |||||| |||||| |||||||||||||||||| |||||||||| ||||| |||||| ||||||||||||||    
T  28647322 tagagtagtgatatatgtacatccatttggtacaactttgttgacaactttaatttgttctcttctcattggtccaaaa 28647400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 30622208 - 30622126
Alignment:
Q  36 tagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| |||||| |||||||| |||||| |||||||||||||||||||||||||  |||||| | ||||||||||||||||    
T  30622208 tagagtagtgatatatgtacaactatttgggacaactttgatgacaactttcattttttctcttcttattggtccaaaacaat 30622126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 7693498 - 7693417
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| ||||||||||||||| |||||||||||||||| ||| |||| ||||||| | ||||||||||||||||    
T  7693498 agagtagtgatatatgtacaaccatttgggacaactttgatgacaatttttattttctctcttcttattggtccaaaacaat 7693417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 118
Target Start/End: Complemental strand, 9200298 - 9200212
Alignment:
Q  32 aaattagagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||| ||||||||||||||||||| |   |||||||||||||||||||| |||| |||||||   ||||||||||||||||    
T  9200298 aaataagagttatgatatttgtacaaccatatctaacaactttgatgacaacttttatttactctcttcctattggtccaaaacaat 9200212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 3800747 - 3800696
Alignment:
Q  67 acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  3800747 acaactttgttgacaactttcattttctctcttctcattggtccaaaacaat 3800696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 26860510 - 26860584
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||||| |   |||||||| ||||||||||| |||| ||||||||  ||||||||||||||||    
T  26860510 tgatatttgtacaaccatatctaacaactttaatgacaacttttatttactctctttctattggtccaaaacaat 26860584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 14569350 - 14569269
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||  |||||||||||||  | ||||||||||| || ||| |||  ||||||||||||||||||||||||||    
T  14569350 agagtagtgatatacgtacaaccatttgagataactttgatgataaattttattatctctcttttcattggtccaaaacaat 14569269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 19789103 - 19789152
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaaa 227  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||||    
T  19789103 ttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctcttaaa 19789152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 27102283 - 27102219
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctctttt 101  Q
    |||||| | |||||||||||||  |||||||||||||| ||||||||||| |||| |||||||||    
T  27102283 agagtagtaatatttgtacaactctttggtacaactttcatgacaactttgattttctctctttt 27102219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 27144105 - 27144041
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctctttt 101  Q
    |||||| | |||||||||||||  |||||||||||||| ||||||||||| |||| |||||||||    
T  27144105 agagtagtaatatttgtacaactctttggtacaactttcatgacaactttgattttctctctttt 27144041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 3821422 - 3821376
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    |||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  3821422 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctt 3821376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 6158675 - 6158749
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||||| |   |||||||| ||||||||||| |||| ||||||||  ||||||||||||||||    
T  6158675 tgatatgtgtacaaccatatctaacaactttaatgacaacttttatttactctctttctattggtccaaaacaat 6158749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 2333558 - 2333477
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| ||||||| ||||||  |||| ||||||||||| ||| |||| ||||||| | ||| ||||||||||||    
T  2333558 agagtactgatatatgtacaatcatttgaaacaattttgatgacaatttttattttctctcttcttattagtccaaaacaat 2333477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 15328668 - 15328591
Alignment:
Q  42 aatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| ||||||  | ||||||||| ||||||||||  ||| ||||||||| ||||||| ||||||||    
T  15328668 aatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtcaaaaacaat 15328591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 16336958 - 16337039
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||| ||| |||||||  |||||| |  |||||||||  |||  ||||||||||||||||| ||||||||    
T  16336958 agagtaatgatatttgaacatccatttgagacaactcttgtgacaacttctattctctctcttttcattggtcaaaaacaat 16337039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 29383601 - 29383552
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaaa 227  Q
    ||||||||||||||| | |||||| ||||||||||||||||| |||||||    
T  29383601 ttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctcttaaa 29383552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 32730072 - 32729991
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||||| || |||||||||||||||||| |   ||||||| ||| ||| |||||||||||||| || ||||||||    
T  32730072 agagcaatgatatatgaacaaccatttggtacaacctatttgacaacattctttttctctcttttcattgatcaaaaacaat 32729991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 3049557 - 3049605
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaa 226  Q
    |||| |||||||||| | ||| |||||||||||||||||||||||||||    
T  3049557 ttgtgaaaaagttgttagaaaatgattgtacaaatatcatttttcttaa 3049605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 16337099 - 16337143
Alignment:
Q  180 gtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||    
T  16337099 gtcaaaaaattgtcataaagtgattgtacaaatatcatttctctt 16337143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 23633230 - 23633294
Alignment:
Q  54 acaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||   |||| |||| |||||||||| |||| |||| |||||||||||||||||||||    
T  23633230 acaaccatttctgacaattttgttgacaacttttattttctcttttttcattggtccaaaacaat 23633294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 27176139 - 27176063
Alignment:
Q  38 gagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaa 114  Q
    ||||| ||||||||||| ||  |||||  ||| |||| ||||||||||||||||||| |||| | ||||||||||||    
T  27176139 gagtagtgatatttgtaaaataatttgtgacatctttaatgacaactttcatttgctttcttcttattggtccaaaa 27176063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 28965867 - 28965914
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctta 225  Q
    ||||||||||||||||| ||| || ||||||||||||||||| |||||    
T  28965867 ttgtcaaaaagttgtaacaaaatggttgtacaaatatcatttctctta 28965914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 2333406 - 2333368
Alignment:
Q  181 tcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  2333406 tcaaaaagttgtaataaagtggttgtacaattatcattt 2333368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 3800608 - 3800562
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||||||||| || ||| ||||||||||||| ||||    
T  3800608 ttgtcaaaaagttgtaataaaatggttgcacaaatatcatttctctt 3800562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 15722530 - 15722576
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||| | ||| |||||||||||||||||||| ||||    
T  15722530 ttgtcaaaaagttgtcacaaaatgattgtacaaatatcatttctctt 15722576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 18792327 - 18792401
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||||| |   |||| ||| ||||||||||| |||| ||||||||  |||||| |||||||||    
T  18792327 tgatatttgtacaaccatatctaacaattttaatgacaacttttatttactctctttctattggttcaaaacaat 18792401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 23633350 - 23633396
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||| |||||||||| ||||| ||||||||||| ||||    
T  23633350 ttgtcaaaaagttataataaagtggttgtagaaatatcatttctctt 23633396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 25924751 - 25924833
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||||||||||||  |||||  | ||||||||| ||||||||||  ||| ||||||||| ||||||| ||||||||    
T  25924751 agagcaatgatatttgtacattcatttaatgacaactttggtgacaactttgttttcctctcttttgattggtcaaaaacaat 25924833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 28548908 - 28548990
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaacttt-gatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||| |||||| ||||||||||  ||||||||| | ||||||||||  |||  |||||||||||||||  ||||||||    
T  28548908 agagtaatgttatttgaacaaccattttatacaacttttggtgacaactttttttttttctcttttcattggttaaaaacaat 28548990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 32253964 - 32253882
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcattt-gctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| ||||| |||||||||||||||  |||||| |||  |||  ||||||||||||||||  ||||||||    
T  32253964 agagtagtgatatttgaacaactatttggtacaacttttgtgacaatttttttttctctctcttttcattggttaaaaacaat 32253882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 2165212 - 2165269
Alignment:
Q  61 tttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||||||  ||||||| || || ||||||||||||||||||| ||||||||    
T  2165212 tttgctacaacttttgtgacaaccttgatgtgctctcttttcattggtcaaaaacaat 2165269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 2176845 - 2176902
Alignment:
Q  61 tttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||||||  ||||||| || || ||||||||||||||||||| ||||||||    
T  2176845 tttgctacaacttttgtgacaaccttgatgtgctctcttttcattggtcaaaaacaat 2176902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 8395386 - 8395345
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  8395386 ttgtcaaaaagttgtgagaaagtggttgtacaaatatcattt 8395345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 15364838 - 15364761
Alignment:
Q  42 aatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| ||||||  | ||||||||| ||||||||||  ||| ||||||||| ||||||  ||||||||    
T  15364838 aatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtaaaaaacaat 15364761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 28875276 - 28875239
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaacttt 74  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  28875276 agagtaatgatatatgtacaaccatttgggacaacttt 28875239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 30253340 - 30253381
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||| ||||| |||||||||||||||||||||||||| ||||    
T  30253340 ttgttaaaaaattgtaataaagtgattgtacaaatattattt 30253381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 32457279 - 32457320
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  32457279 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 32457320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 32784782 - 32784741
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||||| ||| | ||||||||||||||||||    
T  32784782 ttgtcaaaaagttgtaacaaaataattgtacaaatatcattt 32784741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 34413136 - 34413087
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaaa 227  Q
    |||||||||| |||||  ||| |||||||||||||||||||| |||||||    
T  34413136 ttgtcaaaaaattgtagcaaaatgattgtacaaatatcatttctcttaaa 34413087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 8173205 - 8173281
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||| |||||||||||||| ||| |   ||||||| ||  ||| |||||||||||||||||  |||||||    
T  8173205 aatgatatttgaacaaccatttggtataacctatttgacaacctttcttttctctcttttcattggtcagaaacaat 8173281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 25567386 - 25567426
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaa 82  Q
    ||||||||||| |||||||||||||||||| || |||||||    
T  25567386 aatgatatttgaacaaccatttggtacaacctttatgacaa 25567426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 31480861 - 31480909
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaa 226  Q
    ||||||||| ||||| | |||||| ||||||||||||||||| ||||||    
T  31480861 ttgtcaaaatgttgtcagaaagtggttgtacaaatatcatttatcttaa 31480909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 14437 - 14518
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| |||||| |||||||||||||||||| |||||| ||| ||||| |||||| ||||||||||||||||||    
T  14437 agagtagtgatatatgtacatccatttggtacaactttgttgacaattttaatttgttctcttctcattggtccaaaacaat 14518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 21466 - 21542
Alignment:
Q  41 taatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaa 117  Q
    ||||||||| ||||||| ||||||  ||||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  21466 taatgatatatgtacaatcatttgtgacaactttgataacaactttcattttctctcttctcattggtccaaaacaa 21542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 60615 - 60569
Alignment:
Q  72 tttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  60615 tttgatgacaactttcattttctctcttttcattggtccaaaacaat 60569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 60513 - 60467
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||    
T  60513 ttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctctt 60467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 35018 - 34938
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| ||||||||||| |||||||||||||||||| |   ||||||| ||||||| |||||||||||||||| |||||||||    
T  35018 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttcattttctctcttttcattggt-caaaacaat 34938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 4490 - 4417
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||||||||| |  |||||||||||||||||| | |||| |||||||||||||||| |||||||||    
T  4490 tgatatatgtacaaccattggtgacaactttgatgacaactattattttctctcttttcattggt-caaaacaat 4417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 18186 - 18106
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| ||||| ||||| ||||||||| |||||||||||  ||| ||||||||||||||||  ||||||||    
T  18186 agagtagtgatatttgaacaactatttgatacaacttttatgacaacttt-tttttctctcttttcattggttaaaaacaat 18106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 16487 - 16563
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||  |||||||||||||||||||||  ||||||  ||| ||| ||||| ||||||||||| ||||||||    
T  16487 aatgatatttcaacaaccatttggtacaacttttttgacaatcttctttttctctcgtttcattggtcaaaaacaat 16563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 56357 - 56281
Alignment:
Q  42 aatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||  |||||||||||||||||||||  ||||||  ||| ||| ||||| ||||||||||| ||||||||    
T  56357 aatgatatttcaacaaccatttggtacaacttttttgacaatcttctttttctctcgtttcattggtcaaaaacaat 56281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 36786 - 36837
Alignment:
Q  67 acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||| |||||||||| |||| ||||||| ||||||||||||||||||    
T  36786 acaactttgttgacaacttttattttctctcttctcattggtccaaaacaat 36837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 36893 - 36934
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  36893 ttgtcaaaaagttgtaataaagtggttgtgcaaatatcattt 36934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 199310 - 199264
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttctt 224  Q
    |||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  199310 ttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctt 199264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 10762 - 10803
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  10762 ttgtcaaaaaattgtaataaagtggttgtacaaatatcattt 10803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 15077 - 15157
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| ||||||||| ||||| |||||||||||||||  ||||||| ||| ||| |||| |||||||||||  ||||||||    
T  15077 agagtagtgatatttgaacaactatttggtacaacttttgtgacaac-ttctttttctcttttttcattggttaaaaacaat 15157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 219691 - 219744
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttcttaaatgat 231  Q
    ||||||||||||||| | |||||| ||||||||||||||||| |||| ||||||    
T  219691 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctttaatgat 219744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 11814 - 11740
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||||||||||||||| |   |||| ||| ||||||||||| |||| ||||||||  |||||| |||||||||    
T  11814 tgatatttgtacaaccatatctaacaattttaatgacaacttttatttactctctttctattggttcaaaacaat 11740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 404924 - 404882
Alignment:
Q  44 tgatatttgtacaaccatttggtacaactttgatgacaacttt 86  Q
    |||||||||||||||  |||||||||||||| |||||||||||    
T  404924 tgatatttgtacaactctttggtacaacttttatgacaacttt 404882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 9609 - 9532
Alignment:
Q  42 aatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||||||||||| ||||||  | ||||||||| ||||||||||  ||| ||||||||| ||||||  ||||||||    
T  9609 aatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtaaaaaacaat 9532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 17197 - 17140
Alignment:
Q  61 tttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||| |||||||||  ||||||| || || ||||||||||||||||||| ||||||||    
T  17197 tttgctacaacttttgtgacaaccttgatgtgctctcttttcattggtcaaaaacaat 17140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 16431 - 16390
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||| || |||||||||| |||||||||||||||||    
T  16431 ttgtcaaaaaattataataaagtggttgtacaaatatcattt 16390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 16574 - 16493
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    |||||| |||||| |  ||||||||||   ||||||||| |||||||||| |||| |||| || ||||||||||| ||||||    
T  16574 agagtagtgatatattgacaaccatttatgacaactttgttgacaacttttattttctctattctcattggtccataacaat 16493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 17019 - 16978
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    |||||||||||||||| |||| || |||||||||||||||||    
T  17019 ttgtcaaaaagttgtagtaaaatggttgtacaaatatcattt 16978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 17166 - 17077
Alignment:
Q  30 ttaaattagagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggtccaaaacaat 118  Q
    ||||||| ||| ||||||||||||||| ||||||  | ||||||||| ||||||||||  ||  ||||||| | ||||||| ||||||||    
T  17166 ttaaattggagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttctgattggtcaaaaacaat 17077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 15561 - 15602
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| | |||||| |||||||||||||||||    
T  15561 ttgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 15602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 6861 - 6820
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcattt 219  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||    
T  6861 ttgtcaaaaagttgtcataaattgattgtccaaatatcattt 6820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 263722 - 263767
Alignment:
Q  178 ttgtcaaaaagttgtaataaagtgattgtacaaatatcatttttct 223  Q
    |||| |||||||||| | |||||| |||||||||||||||||||||    
T  263722 ttgttaaaaagttgttagaaagtggttgtacaaatatcatttttct 263767  T

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Target: scaffold0241 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 5413 - 5341
Alignment:
Q  37 agagtaatgatatttgtacaaccatttggt-acaactttgatgacaactttcatttgctctcttttcattggt 108  Q
    |||||||||||||||| ||||||||||| | |||||||| |||||| | | | ||| ||||||| ||||||||    
T  5413 agagtaatgatatttgaacaaccatttgctaacaactttcatgacagcctcccttttctctcttctcattggt 5341  T

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