View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_226 (Length: 247)
Name: NF10233A_low_226
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_226 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 36176350 - 36176118
Alignment:
| Q |
1 |
atatactttatatgcactatttaagatgtttacatgcttggttagatttcaaataacattccgaaagtcttaatgtttatttcctcaggctactgagaag |
100 |
Q |
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| T |
36176350 |
atatactttatctgcactatttaagatctttacatgcttggttagatttcaaataacattccgaaagtcttaatgtttatttcctcaggctactgagaag |
36176251 |
T |
|
| Q |
101 |
aaaattgtggaagccgatgcttatgttgctggttagtagtttgcttgctctagtttttgtattgatctcatatcactgtaacaatctacaatgccttaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
36176250 |
aaaattgtggaagccgatgcttatgttgctggttagtagtttgcttgccctagtttttgtattgatctcatatcaccgtaacaatctacaatgccttaac |
36176151 |
T |
|
| Q |
201 |
ctatcattgacttgatatcagcctgtgatgtcc |
233 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
36176150 |
ctatcattgacttgatatcagcctgtgatgtcc |
36176118 |
T |
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