View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10233A_low_260 (Length: 241)

Name: NF10233A_low_260
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10233A_low_260
NF10233A_low_260
[»] chr4 (38 HSPs)
chr4 (166-221)||(40058975-40059030)
chr4 (166-221)||(49287877-49287932)
chr4 (166-224)||(19660652-19660710)
chr4 (166-221)||(27528918-27528973)
chr4 (166-221)||(33992645-33992700)
chr4 (175-221)||(34844881-34844927)
chr4 (166-215)||(1985855-1985904)
chr4 (166-215)||(35229187-35229236)
chr4 (166-214)||(46714411-46714459)
chr4 (166-221)||(22625193-22625248)
chr4 (166-221)||(25852233-25852288)
chr4 (166-221)||(32986216-32986271)
chr4 (166-221)||(33696402-33696457)
chr4 (166-221)||(52983638-52983693)
chr4 (166-220)||(43719189-43719243)
chr4 (171-221)||(51535637-51535687)
chr4 (166-215)||(7392092-7392141)
chr4 (166-215)||(20078113-20078162)
chr4 (166-221)||(2351032-2351087)
chr4 (166-221)||(5609325-5609380)
chr4 (171-221)||(13873418-13873468)
chr4 (166-224)||(32942389-32942447)
chr4 (166-220)||(54127466-54127520)
chr4 (171-220)||(42245770-42245819)
chr4 (166-221)||(20566368-20566424)
chr4 (166-217)||(30938217-30938269)
chr4 (166-226)||(34835548-34835608)
chr4 (166-221)||(35674864-35674919)
chr4 (166-217)||(37980146-37980197)
chr4 (166-217)||(56409977-56410028)
chr4 (171-221)||(12500181-12500231)
chr4 (166-232)||(13771595-13771661)
chr4 (166-224)||(45787824-45787881)
chr4 (166-215)||(12710198-12710247)
chr4 (166-231)||(43352437-43352502)
chr4 (166-203)||(55961883-55961920)
chr4 (175-207)||(13550236-13550268)
chr4 (165-221)||(44343532-44343588)
[»] chr7 (44 HSPs)
chr7 (166-221)||(11997872-11997927)
chr7 (166-224)||(21217953-21218011)
chr7 (166-214)||(19421254-19421302)
chr7 (166-226)||(22703509-22703569)
chr7 (166-214)||(42913643-42913691)
chr7 (166-221)||(2103078-2103133)
chr7 (166-221)||(7175985-7176040)
chr7 (166-221)||(7275300-7275355)
chr7 (166-221)||(7799955-7800010)
chr7 (166-221)||(10091211-10091266)
chr7 (166-221)||(17212076-17212131)
chr7 (166-221)||(22119911-22119966)
chr7 (166-217)||(23854419-23854470)
chr7 (166-221)||(40543033-40543088)
chr7 (166-220)||(27312175-27312229)
chr7 (166-221)||(2751294-2751349)
chr7 (166-221)||(21835174-21835229)
chr7 (166-221)||(22299872-22299927)
chr7 (171-226)||(42814892-42814947)
chr7 (166-220)||(18044130-18044184)
chr7 (166-221)||(13332546-13332601)
chr7 (166-213)||(25333442-25333489)
chr7 (175-214)||(36772432-36772471)
chr7 (171-221)||(31273942-31273992)
chr7 (176-214)||(40332132-40332170)
chr7 (171-220)||(14199790-14199839)
chr7 (166-207)||(31713032-31713073)
chr7 (171-220)||(32849619-32849668)
chr7 (166-226)||(37473640-37473701)
chr7 (166-226)||(22264620-22264680)
chr7 (166-226)||(28089839-28089899)
chr7 (166-221)||(17197073-17197128)
chr7 (174-213)||(27009390-27009429)
chr7 (166-220)||(21370620-21370674)
chr7 (171-221)||(22696348-22696398)
chr7 (166-220)||(23012632-23012686)
chr7 (171-221)||(28646997-28647047)
chr7 (166-215)||(2344322-2344371)
chr7 (171-219)||(3174958-3175007)
chr7 (166-215)||(31197614-31197663)
chr7 (175-207)||(9683858-9683890)
chr7 (166-214)||(27704025-27704073)
chr7 (166-214)||(37693692-37693740)
chr7 (171-215)||(39145781-39145825)
[»] chr6 (29 HSPs)
chr6 (166-221)||(11448890-11448945)
chr6 (166-220)||(28968166-28968220)
chr6 (166-221)||(9238994-9239049)
chr6 (171-221)||(654269-654319)
chr6 (166-212)||(9843957-9844003)
chr6 (173-221)||(14212918-14212966)
chr6 (166-221)||(11007184-11007239)
chr6 (174-221)||(13753267-13753314)
chr6 (166-221)||(15360221-15360276)
chr6 (166-221)||(22576086-22576141)
chr6 (175-226)||(28672095-28672146)
chr6 (166-220)||(5360195-5360249)
chr6 (166-220)||(12591656-12591710)
chr6 (172-221)||(1344960-1345009)
chr6 (166-215)||(9208271-9208320)
chr6 (166-221)||(3222758-3222812)
chr6 (166-221)||(17149579-17149634)
chr6 (166-221)||(33718581-33718636)
chr6 (166-221)||(34147365-34147420)
chr6 (166-221)||(34159981-34160036)
chr6 (166-215)||(21982449-21982498)
chr6 (166-226)||(33499493-33499554)
chr6 (132-168)||(8162322-8162358)
chr6 (171-215)||(17706436-17706480)
chr6 (172-215)||(28741970-28742013)
chr6 (166-220)||(13569502-13569556)
chr6 (178-219)||(6691547-6691588)
chr6 (178-214)||(3433603-3433639)
chr6 (174-226)||(17081172-17081224)
[»] chr1 (39 HSPs)
chr1 (166-221)||(8077666-8077721)
chr1 (166-221)||(45859166-45859221)
chr1 (166-224)||(7197366-7197424)
chr1 (166-224)||(27454986-27455044)
chr1 (165-221)||(9500478-9500534)
chr1 (166-221)||(4621360-4621415)
chr1 (166-221)||(15059525-15059580)
chr1 (166-221)||(24674412-24674467)
chr1 (166-221)||(33905633-33905688)
chr1 (166-221)||(46113525-46113580)
chr1 (171-221)||(7766850-7766900)
chr1 (171-215)||(17935793-17935837)
chr1 (166-221)||(24122042-24122097)
chr1 (166-221)||(34778361-34778416)
chr1 (166-224)||(23734135-23734193)
chr1 (166-224)||(23741327-23741385)
chr1 (171-221)||(36156011-36156061)
chr1 (171-221)||(46607834-46607884)
chr1 (166-215)||(7578428-7578477)
chr1 (173-221)||(20487313-20487361)
chr1 (166-221)||(18646872-18646927)
chr1 (166-220)||(29057461-29057515)
chr1 (166-224)||(37351581-37351639)
chr1 (171-224)||(2272368-2272421)
chr1 (171-220)||(25237113-25237162)
chr1 (171-215)||(21726753-21726797)
chr1 (166-221)||(7946863-7946918)
chr1 (171-214)||(8779866-8779909)
chr1 (166-221)||(14258550-14258605)
chr1 (166-217)||(15581140-15581191)
chr1 (166-221)||(19034509-19034564)
chr1 (171-214)||(24217002-24217045)
chr1 (166-221)||(30677195-30677250)
chr1 (171-221)||(23232388-23232438)
chr1 (166-220)||(25496612-25496666)
chr1 (174-215)||(1818761-1818802)
chr1 (166-215)||(32729564-32729613)
chr1 (171-220)||(52135154-52135203)
chr1 (166-214)||(809241-809289)
[»] chr5 (39 HSPs)
chr5 (171-221)||(36954842-36954892)
chr5 (166-226)||(15971240-15971300)
chr5 (166-221)||(13038577-13038632)
chr5 (166-221)||(15641228-15641283)
chr5 (164-215)||(18207224-18207275)
chr5 (166-221)||(22392720-22392775)
chr5 (166-221)||(27498854-27498909)
chr5 (171-221)||(38684232-38684282)
chr5 (166-223)||(1827651-1827708)
chr5 (166-215)||(34049841-34049890)
chr5 (166-214)||(25586951-25586999)
chr5 (166-226)||(30485847-30485907)
chr5 (166-221)||(8484784-8484839)
chr5 (166-221)||(11926625-11926680)
chr5 (166-221)||(13108572-13108627)
chr5 (166-213)||(19456340-19456387)
chr5 (166-221)||(33709624-33709679)
chr5 (166-221)||(37495066-37495121)
chr5 (166-221)||(38631084-38631139)
chr5 (171-221)||(34310166-34310216)
chr5 (166-215)||(12398577-12398626)
chr5 (166-215)||(32059569-32059618)
chr5 (171-226)||(5067325-5067380)
chr5 (166-221)||(7151348-7151403)
chr5 (166-220)||(7085750-7085804)
chr5 (166-215)||(31288075-31288124)
chr5 (171-224)||(42193509-42193562)
chr5 (166-214)||(6014410-6014458)
chr5 (175-215)||(10869694-10869734)
chr5 (166-214)||(16616138-16616186)
chr5 (174-220)||(8780505-8780551)
chr5 (178-224)||(14656635-14656681)
chr5 (171-224)||(16773838-16773892)
chr5 (171-221)||(19145534-19145584)
chr5 (171-205)||(25750750-25750784)
chr5 (166-215)||(4603796-4603845)
chr5 (166-215)||(15485420-15485469)
chr5 (166-214)||(12317280-12317328)
chr5 (166-214)||(23270652-23270700)
[»] scaffold0019 (1 HSPs)
scaffold0019 (165-221)||(161827-161883)
[»] chr8 (34 HSPs)
chr8 (166-226)||(18532130-18532190)
chr8 (166-221)||(14632977-14633032)
chr8 (166-221)||(28193497-28193552)
chr8 (166-221)||(34237778-34237833)
chr8 (166-221)||(39349279-39349334)
chr8 (166-220)||(20469940-20469994)
chr8 (166-226)||(4698841-4698901)
chr8 (166-221)||(3734746-3734801)
chr8 (166-221)||(4718668-4718723)
chr8 (166-221)||(15259529-15259584)
chr8 (166-221)||(19471632-19471687)
chr8 (166-221)||(19542556-19542611)
chr8 (166-221)||(19590085-19590140)
chr8 (166-215)||(21603253-21603302)
chr8 (166-215)||(27746464-27746513)
chr8 (171-220)||(42643242-42643291)
chr8 (166-221)||(2618209-2618264)
chr8 (166-220)||(264523-264577)
chr8 (166-220)||(651344-651398)
chr8 (166-220)||(837079-837133)
chr8 (171-221)||(32879307-32879357)
chr8 (166-215)||(2166722-2166771)
chr8 (171-215)||(26168977-26169021)
chr8 (171-214)||(7558073-7558116)
chr8 (166-213)||(8042677-8042724)
chr8 (166-221)||(8765649-8765704)
chr8 (171-214)||(24018410-24018453)
chr8 (166-215)||(20305931-20305980)
chr8 (166-215)||(21092564-21092613)
chr8 (166-226)||(35690053-35690114)
chr8 (182-226)||(1372519-1372563)
chr8 (171-215)||(15974933-15974977)
chr8 (171-215)||(28088314-28088358)
chr8 (175-215)||(34694705-34694745)
[»] chr2 (37 HSPs)
chr2 (166-226)||(41314011-41314071)
chr2 (166-221)||(10582113-10582168)
chr2 (166-221)||(30466953-30467008)
chr2 (171-221)||(25293190-25293240)
chr2 (166-215)||(27290607-27290656)
chr2 (166-215)||(44946182-44946231)
chr2 (166-222)||(18976547-18976603)
chr2 (166-221)||(17324785-17324840)
chr2 (166-221)||(33827696-33827751)
chr2 (166-221)||(43374448-43374503)
chr2 (166-221)||(44976277-44976332)
chr2 (166-215)||(11941339-11941388)
chr2 (164-221)||(28194256-28194313)
chr2 (166-215)||(34516537-34516586)
chr2 (166-226)||(5394036-5394096)
chr2 (166-226)||(36242430-36242490)
chr2 (166-221)||(8192474-8192529)
chr2 (175-222)||(8258925-8258972)
chr2 (178-221)||(35171831-35171874)
chr2 (166-220)||(1191532-1191586)
chr2 (171-221)||(4852582-4852632)
chr2 (173-215)||(15037985-15038027)
chr2 (166-215)||(6714410-6714459)
chr2 (171-215)||(32526214-32526258)
chr2 (166-217)||(6099517-6099568)
chr2 (166-221)||(13266509-13266564)
chr2 (166-220)||(19605969-19606023)
chr2 (171-221)||(32845115-32845165)
chr2 (165-226)||(29361572-29361632)
chr2 (165-214)||(38784309-38784358)
chr2 (166-226)||(1845775-1845835)
chr2 (166-214)||(4567567-4567615)
chr2 (171-223)||(18708501-18708553)
chr2 (166-226)||(27269468-27269528)
chr2 (174-226)||(36179903-36179955)
chr2 (171-215)||(38341761-38341805)
chr2 (171-215)||(40997479-40997523)
[»] scaffold0623 (1 HSPs)
scaffold0623 (166-221)||(1179-1234)
[»] scaffold0366 (2 HSPs)
scaffold0366 (166-221)||(9422-9477)
scaffold0366 (166-214)||(12130-12178)
[»] scaffold0199 (1 HSPs)
scaffold0199 (166-221)||(8530-8585)
[»] chr3 (45 HSPs)
chr3 (171-226)||(21362967-21363022)
chr3 (166-221)||(26108311-26108366)
chr3 (166-221)||(30807276-30807331)
chr3 (166-221)||(35492930-35492985)
chr3 (166-221)||(40940844-40940899)
chr3 (166-221)||(45529877-45529932)
chr3 (166-221)||(46576367-46576422)
chr3 (166-221)||(53234033-53234088)
chr3 (166-220)||(25289838-25289892)
chr3 (171-221)||(39041975-39042025)
chr3 (171-221)||(52821758-52821808)
chr3 (171-224)||(7485645-7485698)
chr3 (166-215)||(25379780-25379829)
chr3 (166-215)||(53424305-53424354)
chr3 (166-214)||(26174132-26174180)
chr3 (173-221)||(52455772-52455820)
chr3 (166-221)||(8456273-8456328)
chr3 (171-214)||(29915399-29915442)
chr3 (171-214)||(29964552-29964595)
chr3 (166-221)||(34492698-34492753)
chr3 (166-220)||(15566623-15566677)
chr3 (166-220)||(49258386-49258440)
chr3 (166-215)||(30257643-30257692)
chr3 (171-215)||(9853640-9853684)
chr3 (166-226)||(40133567-40133627)
chr3 (171-215)||(48977412-48977456)
chr3 (176-215)||(1692863-1692902)
chr3 (171-226)||(38732990-38733045)
chr3 (166-221)||(45272539-45272594)
chr3 (166-220)||(10083943-10083997)
chr3 (166-220)||(10190866-10190920)
chr3 (175-220)||(7470339-7470384)
chr3 (174-215)||(19857078-19857119)
chr3 (166-226)||(49167075-49167135)
chr3 (166-214)||(50583011-50583059)
chr3 (174-221)||(31537961-31538008)
chr3 (174-217)||(36660797-36660840)
chr3 (175-221)||(18177010-18177056)
chr3 (171-224)||(39253728-39253782)
chr3 (166-226)||(10499098-10499159)
chr3 (171-220)||(32151448-32151497)
chr3 (166-221)||(10445133-10445189)
chr3 (166-214)||(14343418-14343466)
chr3 (171-215)||(25344186-25344230)
chr3 (166-217)||(47454615-47454667)
[»] scaffold0068 (1 HSPs)
scaffold0068 (171-220)||(41768-41817)
[»] scaffold0459 (1 HSPs)
scaffold0459 (166-214)||(10823-10871)
[»] scaffold0576 (1 HSPs)
scaffold0576 (166-221)||(5205-5260)
[»] scaffold0328 (1 HSPs)
scaffold0328 (172-221)||(15016-15065)
[»] scaffold0217 (1 HSPs)
scaffold0217 (166-215)||(7438-7487)
[»] scaffold0717 (1 HSPs)
scaffold0717 (166-226)||(76-136)
[»] scaffold0460 (1 HSPs)
scaffold0460 (173-221)||(8302-8350)
[»] scaffold0070 (1 HSPs)
scaffold0070 (174-221)||(40352-40399)
[»] scaffold0051 (1 HSPs)
scaffold0051 (166-221)||(52994-53049)
[»] scaffold0026 (1 HSPs)
scaffold0026 (166-221)||(97489-97544)
[»] scaffold0049 (1 HSPs)
scaffold0049 (166-215)||(66781-66830)
[»] scaffold0299 (1 HSPs)
scaffold0299 (166-221)||(11554-11610)
[»] scaffold0240 (1 HSPs)
scaffold0240 (171-214)||(12884-12927)
[»] scaffold0157 (1 HSPs)
scaffold0157 (171-221)||(20246-20296)
[»] scaffold0028 (1 HSPs)
scaffold0028 (166-215)||(27795-27844)


Alignment Details
Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 40059030 - 40058975
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40059030 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 40058975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 49287877 - 49287932
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  49287877 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctg 49287932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 19660710 - 19660652
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatg 224  Q
    |||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  19660710 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattctctctgatg 19660652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 27528973 - 27528918
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  27528973 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 27528918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 33992645 - 33992700
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  33992645 ttggtttgggatcttggagtttgctcctccagaggtcttaggttcgattctctctg 33992700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 34844927 - 34844881
Alignment:
Q  175 gatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  34844927 gatcttggagtttgctcctccagaggtctcaggttcgattctctctg 34844881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 1985855 - 1985904
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  1985855 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 1985904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 35229187 - 35229236
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  35229187 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 35229236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 46714411 - 46714459
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||    
T  46714411 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 46714459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 22625248 - 22625193
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  22625248 ttggcttgggatcttggagtttactcctccagaggtctcaggttcgattccctctg 22625193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 25852233 - 25852288
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  25852233 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 25852288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 32986216 - 32986271
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| ||||||||||||||| |||| |||||    
T  32986216 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctg 32986271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 33696457 - 33696402
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| ||||||||||||||| |||| |||||    
T  33696457 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctg 33696402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 52983638 - 52983693
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||| |||||||||||||||||||| |||||||||||||||||||| |||||    
T  52983638 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctg 52983693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 43719243 - 43719189
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| ||| |||||||||||||||||||| |||||| ||||||||||||||||||    
T  43719243 ttggtttgagatcttggagtttgctcctccagaggtttcaggttcgattctctct 43719189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 51535637 - 51535687
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  51535637 ttgggatcttggagtttgctcctccacaggtctcaggttcgattccctctg 51535687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 7392141 - 7392092
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  7392141 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 7392092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 20078162 - 20078113
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| |||||||||||||| |||||    
T  20078162 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattc 20078113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 2351032 - 2351087
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||| |||||| |||||||||||| |||||||||||||||||||| |||||    
T  2351032 ttggcttggaatcttgaagtttgctcctccagaggtctcaggttcgattccctctg 2351087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 5609380 - 5609325
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||||||||||||| |  || |||||||||||||||||||||||    
T  5609380 ttggcttgggatcttggagtttgctcattcagtggtctcaggttcgattctctctg 5609325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 13873468 - 13873418
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||||  | |||||||||||||||||| |||||    
T  13873468 ttgggatcttggagtttgctccttcaaaggtctcaggttcgattccctctg 13873418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 32942389 - 32942447
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatg 224  Q
    |||| ||| ||||||||||||| |||||| |||||| | ||||||||||||||||||||    
T  32942389 ttggcttgagatcttggagtttactcctccagaggtttaaggttcgattctctctgatg 32942447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 54127520 - 54127466
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||||||||||||||||| | ||||||||||||| |||| ||||    
T  54127520 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctct 54127466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 42245770 - 42245819
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||| ||||    
T  42245770 ttgggatcttagagtttgctcctctaaaggtctcgggttcgattccctct 42245819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 20566368 - 20566424
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggt-ctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| ||||||  ||||||||||||| |||||    
T  20566368 ttggcttgggatcttggagtttgctcctccagaggtgatcaggttcgattccctctg 20566424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 30938269 - 30938217
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctc-tagaggtctcaggttcgattctc 217  Q
    |||| ||||||||||||||| |||||||| | |||||||||||||||||||||    
T  30938269 ttggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 30938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 34835548 - 34835608
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| |||||||||| ||||||||||||||  |||||||| ||||||||| ||||| ||||    
T  34835548 ttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctctggtgtc 34835608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 35674919 - 35674864
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||||||||||||| || | ||||| |||||||||||| |||||    
T  35674919 ttggcttgggatcttggagtttgctcttccaaaggtcacaggttcgattccctctg 35674864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 37980197 - 37980146
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctc 217  Q
    |||| |||||| |||||||| |||||||||  ||||||||||||||||||||    
T  37980197 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctc 37980146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 56409977 - 56410028
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctc 217  Q
    |||| |||||| |||||||| |||||||||  ||||||||||||||||||||    
T  56409977 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctc 56410028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 12500231 - 12500181
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||||  | |||||||||||| ||||| |||||    
T  12500231 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccctctg 12500181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 13771661 - 13771595
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtccatctc 232  Q
    |||| ||||||||||| ||||||||| |||  ||||||||  |||||||| |||||||||| |||||    
T  13771661 ttggcttgggatcttgaagtttgctcatctcaaggtctcaaattcgattccctctgatgtcaatctc 13771595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 45787881 - 45787824
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatg 224  Q
    |||| |||| |||||||| |||||||||| |||| ||||||||||||||| ||||||||    
T  45787881 ttggcttggaatcttgga-tttgctcctccagagatctcaggttcgattccctctgatg 45787824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 12710198 - 12710247
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| ||||||||||||||| |||| ||||  ||||||||||||||||||    
T  12710198 ttggtttgggatcttggagtatgcttctcttaaggtctcaggttcgattc 12710247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 43352502 - 43352437
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtccatct 231  Q
    |||| ||| |||| ||||||||||||||||  ||  |||||||||||||||||||| |||| ||||    
T  43352502 ttggcttgagatcatggagtttgctcctctcaagaactcaggttcgattctctctggtgtcaatct 43352437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 55961920 - 55961883
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtct 203  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  55961920 ttggcttgggatcttggagtttgctcctccagaggtct 55961883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 13550236 - 13550268
Alignment:
Q  175 gatcttggagtttgctcctctagaggtctcagg 207  Q
    ||||| |||||||||||||||||||||||||||    
T  13550236 gatctgggagtttgctcctctagaggtctcagg 13550268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 44343532 - 44343588
Alignment:
Q  165 tttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||| |||||||||||||||||||||| | | ||| |||| ||||||||| |||||    
T  44343532 tttggcttgggatcttggagtttgctcccccaaaggactcaagttcgattccctctg 44343588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 11997872 - 11997927
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11997872 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctg 11997927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 21218011 - 21217953
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatg 224  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  21218011 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatg 21217953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 19421254 - 19421302
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19421254 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatt 19421302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 22703509 - 22703569
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  22703509 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtc 22703569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 42913691 - 42913643
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42913691 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatt 42913643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 2103078 - 2103133
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  2103078 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 2103133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 7176040 - 7175985
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  7176040 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 7175985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 7275300 - 7275355
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  7275300 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 7275355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 7800010 - 7799955
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  7800010 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 7799955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 10091211 - 10091266
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  10091211 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 10091266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 17212076 - 17212131
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  17212076 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattctctctg 17212131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 22119911 - 22119966
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  22119911 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 22119966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 23854419 - 23854470
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctc 217  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  23854419 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctc 23854470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 40543088 - 40543033
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  40543088 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 40543033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 27312175 - 27312229
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  27312175 ttggcttgggatcttggagtttgctcctctagaggtttcaggttcgattccctct 27312229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 2751294 - 2751349
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  2751294 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 2751349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 21835174 - 21835229
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||| ||||||||||||||| |||||    
T  21835174 ttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctg 21835229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 22299872 - 22299927
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  22299872 ttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctg 22299927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 42814892 - 42814947
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    ||||||||||||||||||||||||| || |||||||||||||||| ||||| ||||    
T  42814892 ttgggatcttggagtttgctcctcttgaagtctcaggttcgattccctctggtgtc 42814947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 18044130 - 18044184
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  18044130 ttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccctct 18044184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 13332601 - 13332546
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||||||||||||||||  |||||||||||| |||||| |||||    
T  13332601 ttggcttgggatcttggagtttgctcctcctgaggtctcaggtacgattccctctg 13332546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 25333442 - 25333489
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgat 213  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  25333442 ttggcttgggatcttggagtttgcttctccagaggtctcaggttcgat 25333489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 36772471 - 36772432
Alignment:
Q  175 gatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  36772471 gatcttggagtttgctcctctagaggtctcaggtttgatt 36772432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 31273942 - 31273992
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||||| |||| ||||| ||||||||| |||||    
T  31273942 ttgggatcttggagtttgctcctccagagctctcaagttcgattccctctg 31273992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 40332132 - 40332170
Alignment:
Q  176 atcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  40332132 atcttggagtttgctcctctaaaggtctcaggttcgatt 40332170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 14199839 - 14199790
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||||| |||||| |||||||||||||||||||| ||||    
T  14199839 ttggaatcttggagtttcctcctccagaggtctcaggttcgattccctct 14199790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 31713073 - 31713032
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcagg 207  Q
    |||| |||||||||||||||||||||||| ||||||||||||    
T  31713073 ttggtttgggatcttggagtttgctcctcgagaggtctcagg 31713032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 32849619 - 32849668
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||| ||||    
T  32849619 ttgggatcttggagtttgctcctccagaggtctcgggtttgattccctct 32849668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 37473640 - 37473701
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctc-tagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| ||||||||| |||||||||||||| | ||||||||||||||||||||| || |||||    
T  37473640 ttggtttgggatctaggagtttgctcctccttgaggtctcaggttcgattctccctaatgtc 37473701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 22264680 - 22264620
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| |||| ||||||||||||||||||||  ||||||||| |||||||| ||||| ||||    
T  22264680 ttggtttggaatcttggagtttgctcctctcaaggtctcagattcgattccctctggtgtc 22264620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 28089839 - 28089899
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||| | ||||| ||||    
T  28089839 ttggcttgagatcttggagtttgctcctccagatgtctcaggttcgataccctctggtgtc 28089899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 17197128 - 17197073
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||| |||||||||||||||||||| | |||||||| ||||||||| |||||    
T  17197128 ttggtttgcgatcttggagtttgctcctccataggtctcaagttcgattccctctg 17197073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 27009390 - 27009429
Alignment:
Q  174 ggatcttggagtttgctcctctagaggtctcaggttcgat 213  Q
    |||||||||||||||||| || ||||||||||||||||||    
T  27009390 ggatcttggagtttgctcatccagaggtctcaggttcgat 27009429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 21370620 - 21370674
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| ||||||||||||||||| |||||  ||| |||||||||||||||| ||||    
T  21370620 ttggtttgggatcttggagtttactccttcagatgtctcaggttcgattccctct 21370674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 22696348 - 22696398
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||||||||||||| |||||||||  |||||||||||| ||||| |||||    
T  22696348 ttgggatcttggagtgtgctcctctcaaggtctcaggtttgattccctctg 22696398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 23012686 - 23012632
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||||||||||||| ||| |||||||| ||||| ||||| ||||    
T  23012686 ttggcttgggatcttggagtttgcttctccagaggtcttaggtttgattccctct 23012632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 28646997 - 28647047
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||||||||||||| |||| ||||  |||||||||||||||||| |||||    
T  28646997 ttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccctctg 28647047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 2344322 - 2344371
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| | || |||||| ||||||||    
T  2344322 ttggcttgggatcttggagtttgctcctccaaagctctcagattcgattc 2344371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 3174958 - 3175007
Alignment:
Q  171 ttgggatcttggagtttgctcc-tctagaggtctcaggttcgattctctc 219  Q
    ||||||||| ||||| |||||| ||| |||||||||||||||||||||||    
T  3174958 ttgggatctgggagtgtgctccatctcgaggtctcaggttcgattctctc 3175007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 31197614 - 31197663
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| ||||||||||||||||||||| || ||| |||||||||| |||||    
T  31197614 ttggcttgggatcttggagtttgctcatccagatgtctcaggtttgattc 31197663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 9683858 - 9683890
Alignment:
Q  175 gatcttggagtttgctcctctagaggtctcagg 207  Q
    ||||| |||||||||||||||||||||||||||    
T  9683858 gatctgggagtttgctcctctagaggtctcagg 9683890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 27704025 - 27704073
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| ||| ||||||| |||||||||||  |||||||||||||||||||    
T  27704025 ttggcttgagatcttgaagtttgctcctacagaggtctcaggttcgatt 27704073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 37693740 - 37693692
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| ||||||||||||||| |||||||||  | |||||||||||||||    
T  37693740 ttggtttgggatcttggagtgtgctcctcttaatgtctcaggttcgatt 37693692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 39145825 - 39145781
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||||||||||||||||||||| ||| ||||  ||||||||||    
T  39145825 ttgggatcttggagtttgctcctccagatgtcttcggttcgattc 39145781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 11448890 - 11448945
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11448890 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctg 11448945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 28968220 - 28968166
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28968220 ttggcttgggatcttggagtttgctcctctagaggtctcagattcgattctctct 28968166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 9238994 - 9239049
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  9238994 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 9239049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 654319 - 654269
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  654319 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 654269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 9843957 - 9844003
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcga 212  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  9843957 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcga 9844003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 14212918 - 14212966
Alignment:
Q  173 gggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  14212918 gggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 14212966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 11007184 - 11007239
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  11007184 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattcactctg 11007239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 13753267 - 13753314
Alignment:
Q  174 ggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  13753267 ggatcttggagtttgctcctccagaggtctcaggttcaattctctctg 13753314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 15360276 - 15360221
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  15360276 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 15360221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 22576086 - 22576141
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  22576086 ttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctg 22576141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 28672095 - 28672146
Alignment:
Q  175 gatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  28672095 gatcttggagtttgctcctctagaggtcttaggttcgattccctctggtgtc 28672146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 5360249 - 5360195
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||||||||||||| ||| |||||||||||||||||||| ||||    
T  5360249 ttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccctct 5360195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 12591656 - 12591710
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||||||||||||||||| | |||||||||||||||||| ||||    
T  12591656 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctct 12591710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 1344960 - 1345009
Alignment:
Q  172 tgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  1344960 tgggatcttggagtttgttcctccagaggtctcaggttcgattccctctg 1345009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 9208271 - 9208320
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  9208271 ttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattc 9208320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 3222812 - 3222758
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  3222812 ttggcttgggatcttgcagtttgctcctc-agaggtctcaggttcgattccctctg 3222758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 17149634 - 17149579
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||||||| |||||||||  |||||||||||||||||| |||||    
T  17149634 ttggtttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctg 17149579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 33718636 - 33718581
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||||||||| || ||| |||| |||||||||||||||||||||    
T  33718636 ttggtttgggatcttggagtttacttctccagagatctcaggttcgattctctctg 33718581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 34147365 - 34147420
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||||||||||||| || ||| |||||||||||||||| |||||    
T  34147365 ttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctg 34147420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 34159981 - 34160036
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||||||||||||| || ||| |||||||||||||||| |||||    
T  34159981 ttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccctctg 34160036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 21982498 - 21982449
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| ||||||||||| |||||||||||| |||||||| |||||||||||    
T  21982498 ttggcttgggatcttgaagtttgctcctccagaggtctgaggttcgattc 21982449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 33499493 - 33499554
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttc-gattctctctgatgtc 226  Q
    |||| |||||||||||||||||||||||||  ||||||||||||| ||||| ||||| ||||    
T  33499493 ttggcttgggatcttggagtttgctcctctcaaggtctcaggttcagattccctctggtgtc 33499554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 8162358 - 8162322
Alignment:
Q  132 atcaactcattctgtcttatattgagagatccatttg 168  Q
    |||||||||||||||||||||||||||||| ||||||    
T  8162358 atcaactcattctgtcttatattgagagattcatttg 8162322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 17706480 - 17706436
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||    
T  17706480 ttgggatcttggagtttgctcctccagaagtctcaagttcgattc 17706436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 28742013 - 28741970
Alignment:
Q  172 tgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||||||||||| |||||||||  ||||||||||||||||||    
T  28742013 tgggatcttggagtgtgctcctctcaaggtctcaggttcgattc 28741970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 13569502 - 13569556
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||| ||||||||||||| ||||||  ||||||||||||||| |||||||    
T  13569502 ttggcttggaatcttggagtttgttcctctcaaggtctcaggttcgaatctctct 13569556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 6691588 - 6691547
Alignment:
Q  178 cttggagtttgctcctctagaggtctcaggttcgattctctc 219  Q
    |||||||| |||||||||  ||||||||||||||||||||||    
T  6691588 cttggagtgtgctcctctcaaggtctcaggttcgattctctc 6691547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 3433639 - 3433603
Alignment:
Q  178 cttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    ||||||||||||||||||  |||||||||||||||||    
T  3433639 cttggagtttgctcctctcaaggtctcaggttcgatt 3433603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 17081224 - 17081172
Alignment:
Q  174 ggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    ||||||||||||||||||||| ||| |||||| ||| ||||| ||||| ||||    
T  17081224 ggatcttggagtttgctcctccagatgtctcaagtttgattccctctggtgtc 17081172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 8077666 - 8077721
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8077666 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctg 8077721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 45859221 - 45859166
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45859221 ttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctg 45859166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 7197424 - 7197366
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatg 224  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  7197424 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatg 7197366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 27455044 - 27454986
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatg 224  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  27455044 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcactctgatg 27454986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 9500534 - 9500478
Alignment:
Q  165 tttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  9500534 tttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattctctctg 9500478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 4621415 - 4621360
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  4621415 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 4621360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 15059580 - 15059525
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  15059580 ttggcttggaatcttggagtttgctcctccagaggtctcaggttcgattctctctg 15059525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 24674412 - 24674467
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  24674412 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 24674467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 33905688 - 33905633
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  33905688 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 33905633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 46113580 - 46113525
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  46113580 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 46113525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 7766900 - 7766850
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  7766900 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 7766850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 17935793 - 17935837
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  17935793 ttgggatcttggagtttgctcctccagaggtctcaggttcgattc 17935837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 24122042 - 24122097
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  24122042 ttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctg 24122097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 34778361 - 34778416
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  34778361 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctg 34778416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 23734135 - 23734193
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatg 224  Q
    |||| |||||||||| || |||||||||| |||||||||||||||||||| ||||||||    
T  23734135 ttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatg 23734193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 23741327 - 23741385
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatg 224  Q
    |||| |||||||||| || |||||||||| |||||||||||||||||||| ||||||||    
T  23741327 ttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctctgatg 23741385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 36156061 - 36156011
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| |||||    
T  36156061 ttgggatcttggagtttgctcctccagaggtgtcaggttcgattccctctg 36156011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 46607834 - 46607884
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  46607834 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 46607884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 7578428 - 7578477
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  7578428 ttggcttgggatcttggagtttgttcctccagaggtctcaggttcgattc 7578477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 20487361 - 20487313
Alignment:
Q  173 gggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  20487361 gggatcttggagtttgctcctccagaggtctcaagttcgattccctctg 20487313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 18646872 - 18646927
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||| |||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  18646872 ttggcttgtgatctttgagtttgcttctccagaggtctcaggttcgattctctctg 18646927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 29057515 - 29057461
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||||| ||||    
T  29057515 ttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgattccctct 29057461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 37351639 - 37351581
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatg 224  Q
    |||| |||||||||||||||||||||||| | | ||||||||||||||||  |||||||    
T  37351639 ttggcttgggatcttggagtttgctcctccaaatgtctcaggttcgattccttctgatg 37351581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 2272368 - 2272421
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatg 224  Q
    |||||||||| ||||||||||||  |||||||||||||| ||||| ||||||||    
T  2272368 ttgggatcttagagtttgctcctacagaggtctcaggtttgattccctctgatg 2272421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 25237162 - 25237113
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||||||||||||||||||| ||||  |||||||||||||||||| ||||    
T  25237162 ttgggatcttggagtttgcttctctcaaggtctcaggttcgattccctct 25237113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 21726753 - 21726797
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||||    
T  21726753 ttgggttcttgaagtttgctcctccagaggtctcaggttcgattc 21726797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 7946863 - 7946918
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||| ||||||| |||||||||||| |||||||||| ||||||||| |||||    
T  7946863 ttggcttgagatcttgaagtttgctcctccagaggtctcaagttcgattccctctg 7946918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 8779909 - 8779866
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||    
T  8779909 ttgggatcttggagtttgcttctccagaggtctcagcttcgatt 8779866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 14258605 - 14258550
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||| ||||| ||| ||||| |||||||||| |||||    
T  14258605 ttggcttgggatcttggagtttgttcctccagatgtctctggttcgattccctctg 14258550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 15581191 - 15581140
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctc 217  Q
    |||| |||||| |||||||| |||||||||| ||||||||||||| ||||||    
T  15581191 ttggcttgggaccttggagtgtgctcctctaaaggtctcaggttcaattctc 15581140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 19034564 - 19034509
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||| ||||| | |||| |||||||||||| ||||||    
T  19034564 ttggtttgggatcttggagtttgttcctcaaaaggtttcaggttcgattatctctg 19034509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 24217002 - 24217045
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    ||||||||||||||| |||||||||  |||||||||||||||||    
T  24217002 ttgggatcttggagtgtgctcctctcaaggtctcaggttcgatt 24217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 30677195 - 30677250
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||| |||||||||||||| | |||||||||||| ||||| |||||    
T  30677195 ttggtttgggatctaggagtttgctcctccaaaggtctcaggtttgattccctctg 30677250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 23232438 - 23232388
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||||||||| ||||||||| || |||||| ||||||||||||| |||||    
T  23232438 ttgggatcttgaagtttgctcttccagaggtttcaggttcgattccctctg 23232388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 25496666 - 25496612
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||||||| ||||||||||  |||||||| ||||||||| ||||    
T  25496666 ttggcttgggatcttggagattgctcctcttaaggtctcaagttcgattccctct 25496612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 1818761 - 1818802
Alignment:
Q  174 ggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||||||||||||||| || |||||| |||||||||||||    
T  1818761 ggatcttggagtttgctcttccagaggtttcaggttcgattc 1818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 32729564 - 32729613
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||| ||||||||||||||  | ||||||||||||||||    
T  32729564 ttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattc 32729613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 52135154 - 52135203
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    ||||||||||||||||||||| |||  | ||||||||||||||| |||||    
T  52135154 ttgggatcttggagtttgctcatctcaatgtctcaggttcgattatctct 52135203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 809241 - 809289
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| ||||||||||||||||| |||||||  |||||||||||| ||||    
T  809241 ttggtttgggatcttggagtttactcctcttaaggtctcaggtttgatt 809289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 36954842 - 36954892
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36954842 ttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctg 36954892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 15971300 - 15971240
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  15971300 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctgatgtc 15971240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 13038632 - 13038577
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  13038632 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 13038577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 15641283 - 15641228
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  15641283 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 15641228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 18207224 - 18207275
Alignment:
Q  164 atttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  18207224 atttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 18207275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 22392720 - 22392775
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  22392720 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 22392775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 27498909 - 27498854
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  27498909 ttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccctctg 27498854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 38684232 - 38684282
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  38684232 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 38684282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 1827708 - 1827651
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgat 223  Q
    |||| ||| |||||||||||||||||||| |||||||||||||||||||| |||||||    
T  1827708 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctgat 1827651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 34049841 - 34049890
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  34049841 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 34049890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 25586951 - 25586999
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||    
T  25586951 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 25586999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 30485847 - 30485907
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||    
T  30485847 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattcactctggtgtc 30485907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 8484839 - 8484784
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  8484839 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctg 8484784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 11926680 - 11926625
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  11926680 ttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccctctg 11926625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 13108627 - 13108572
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||| ||||||||||||||| |||||    
T  13108627 ttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctg 13108572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 19456387 - 19456340
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgat 213  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  19456387 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgat 19456340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 33709679 - 33709624
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  33709679 ttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctg 33709624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 37495066 - 37495121
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||| |||||||||||||||||||| |||||||||||||||||||| |||||    
T  37495066 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctg 37495121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 38631139 - 38631084
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  38631139 ttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccctctg 38631084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 34310166 - 34310216
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||||||||||| |||||||||||||||||||| |||||    
T  34310166 ttggaatcttggagtttgctcctccagaggtctcaggttcgattccctctg 34310216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 12398626 - 12398577
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  12398626 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 12398577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 32059618 - 32059569
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  32059618 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 32059569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 5067325 - 5067380
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||||||||| ||||||||||||| |||| |||||||||||||| |||||| ||||    
T  5067325 ttgggatcttcgagtttgctcctccagagatctcaggttcgattttctctggtgtc 5067380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 7151348 - 7151403
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||| || |||||    
T  7151348 ttggcttgggatcttggagtttgctcctcaagaggtcttaggttcgactccctctg 7151403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 7085804 - 7085750
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| ||||||||||||||||| |||||| ||||||||| |||||||||| ||||    
T  7085804 ttggcttgggatcttggagttttctcctccagaggtctccggttcgattccctct 7085750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 31288124 - 31288075
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| | |||||||| |||||||||    
T  31288124 ttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattc 31288075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 42193509 - 42193562
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatg 224  Q
    |||||||||||||||||||| | | |||||||||||||||||||  ||||||||    
T  42193509 ttgggatcttggagtttgcttccccagaggtctcaggttcgatttcctctgatg 42193562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 6014458 - 6014410
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| |||||||||||||||||||| ||| |||| ||||||||||||||    
T  6014458 ttggcttgggatcttggagtttgcttctccagagatctcaggttcgatt 6014410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 10869734 - 10869694
Alignment:
Q  175 gatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  10869734 gatcttggagtttgctcctccaaaggtctcaggttcgattc 10869694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 16616138 - 16616186
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| |||||||||||||||||||||||||| || |||||| |||||||    
T  16616138 ttggcttgggatcttggagtttgctcctctaaagatctcagattcgatt 16616186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 8780505 - 8780551
Alignment:
Q  174 ggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||||||||||| |||||||||  ||||||||||||||||| |||||    
T  8780505 ggatcttggagtgtgctcctctcaaggtctcaggttcgattgtctct 8780551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 14656681 - 14656635
Alignment:
Q  178 cttggagtttgctcctctagaggtctcaggttcgattctctctgatg 224  Q
    ||||||||||||||||||  ||||||||||||||||| | |||||||    
T  14656681 cttggagtttgctcctctcaaggtctcaggttcgattgtttctgatg 14656635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 16773838 - 16773892
Alignment:
Q  171 ttgggatcttggagtttgctcctc-tagaggtctcaggttcgattctctctgatg 224  Q
    |||||| || ||||| |||||||| | ||||||||||||||||||||||||||||    
T  16773838 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatg 16773892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 19145584 - 19145534
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||||||||||||| |||||||||  ||||||| |||||||||| |||||    
T  19145584 ttgggatcttggagtatgctcctctcaaggtctccggttcgattccctctg 19145534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Complemental strand, 25750784 - 25750750
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctca 205  Q
    |||||||||||||||||||||||| ||||||||||    
T  25750784 ttgggatcttggagtttgctcctccagaggtctca 25750750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 4603796 - 4603845
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| | || ||||| |||||||||    
T  4603796 ttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattc 4603845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 15485469 - 15485420
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||| |||||||| |||||||||  ||||||||||||||||||    
T  15485469 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattc 15485420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 12317328 - 12317280
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| |||| |||||||||||||||||||| |||||||| |||| ||||    
T  12317328 ttggcttggaatcttggagtttgctcctcttgaggtctcgggtttgatt 12317280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 23270700 - 23270652
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| ||||||||||||||||||||| || | |||||||| ||||||||    
T  23270700 ttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatt 23270652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 161827 - 161883
Alignment:
Q  165 tttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  161827 tttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 161883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 18532130 - 18532190
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  18532130 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctcagatgtc 18532190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 14632977 - 14633032
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  14632977 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 14633032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 28193497 - 28193552
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  28193497 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 28193552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 34237833 - 34237778
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  34237833 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 34237778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 39349279 - 39349334
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  39349279 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 39349334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 20469940 - 20469994
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  20469940 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctct 20469994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 4698901 - 4698841
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||    
T  4698901 ttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctggtgtc 4698841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 3734801 - 3734746
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  3734801 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 3734746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 4718668 - 4718723
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  4718668 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctg 4718723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 15259584 - 15259529
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  15259584 ttggtttgggatcttggattttgctcctccagaggtctcaggttcgattccctctg 15259529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 19471632 - 19471687
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  19471632 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctg 19471687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 19542556 - 19542611
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  19542556 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctg 19542611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 19590140 - 19590085
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  19590140 ttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctg 19590085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 21603253 - 21603302
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||| ||||||||||||| ||||||||||||||||||||    
T  21603253 ttggcttgggatcttagagtttgctcctccagaggtctcaggttcgattc 21603302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 27746513 - 27746464
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  27746513 ttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 27746464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 42643291 - 42643242
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  42643291 ttgggatcttggagtttgctcctccagaggtctcagattcgattccctct 42643242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 2618209 - 2618264
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| ||||||||  |||||||||| |||||    
T  2618209 ttggcttgggatcttggagtttgctcctccagaggtcttgggttcgattccctctg 2618264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 264577 - 264523
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||| ||||    
T  264577 ttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctct 264523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 651344 - 651398
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||| ||||    
T  651344 ttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctct 651398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 837079 - 837133
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||| ||||||||||||| |||| ||||||||||||||| ||||    
T  837079 ttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctct 837133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 32879307 - 32879357
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||| |||||    
T  32879307 ttgggatcttcgagtttggtcctccagaggtctcaggttcgattccctctg 32879357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 2166722 - 2166771
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||| ||| | ||||||||||||||||||    
T  2166722 ttggtttgggatcttggagtttgcttctccaaaggtctcaggttcgattc 2166771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 26169021 - 26168977
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||||||||||||||||||||||  |||||||||||| |||||    
T  26169021 ttgggatcttggagtttgctcctctcaaggtctcaggtttgattc 26168977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 7558116 - 7558073
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||    
T  7558116 ttgggatcttggagtttgctcctccagaagtctcagattcgatt 7558073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 8042677 - 8042724
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgat 213  Q
    |||| |||||||||||||||||||||||| | | ||||||||||||||    
T  8042677 ttggcttgggatcttggagtttgctcctccaaaagtctcaggttcgat 8042724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 8765704 - 8765649
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||| |||||||||||||||||| | |||| ||||||||||||||| |||||    
T  8765704 ttggcttgagatcttggagtttgctcccccagagatctcaggttcgattccctctg 8765649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 24018410 - 24018453
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||||||||||||||||||||||| | |||||| ||||||||||    
T  24018410 ttgggatcttggagtttgctcctccaaaggtctgaggttcgatt 24018453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 20305931 - 20305980
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||| ||||||||||||| | ||||||||| ||||||||    
T  20305931 ttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattc 20305980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 21092564 - 21092613
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||| ||||||||||||| | ||||||||| ||||||||    
T  21092564 ttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattc 21092613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 35690114 - 35690053
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctc-tagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| ||||||||| || ||||||||||| |  |||||||||||||||||||||||| ||||    
T  35690114 ttggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctggtgtc 35690053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 1372563 - 1372519
Alignment:
Q  182 gagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| |||||||||  |||||||||||||||||| ||||||||||    
T  1372563 gagtgtgctcctcttaaggtctcaggttcgattccctctgatgtc 1372519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 15974933 - 15974977
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    ||||||||||||||| |||||||||  |||||||| |||||||||    
T  15974933 ttgggatcttggagtatgctcctctcaaggtctcaagttcgattc 15974977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 28088314 - 28088358
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||||||||||||||| || || ||||||||||| ||||||||    
T  28088314 ttgggatcttggagtttgttcatccagaggtctcagattcgattc 28088358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 34694745 - 34694705
Alignment:
Q  175 gatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||||||||||||||||||  |||||| |||||||||||    
T  34694745 gatcttggagtttgctcctctcaaggtcttaggttcgattc 34694705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 41314011 - 41314071
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  41314011 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtc 41314071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 10582168 - 10582113
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  10582168 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 10582113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 30467008 - 30466953
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  30467008 ttggtttgggatattggagtttgttcctctagaggtctcaggttcgattctctctg 30466953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 25293190 - 25293240
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  25293190 ttgggatcttggagtttgctcctcgagaggtctcaggttcgattccctctg 25293240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 27290607 - 27290656
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  27290607 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 27290656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 44946231 - 44946182
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  44946231 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 44946182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 18976603 - 18976547
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctga 222  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  18976603 ttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctga 18976547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 17324785 - 17324840
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||||||| |||||    
T  17324785 ttggtttggtatcttggagtttgctcctccagaggtctcaggttcgattccctctg 17324840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 33827751 - 33827696
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||||||| |||||    
T  33827751 ttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccctctg 33827696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 43374503 - 43374448
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  43374503 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctctg 43374448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 44976332 - 44976277
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  44976332 ttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctctg 44976277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 11941388 - 11941339
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| ||||||||||||||| ||||    
T  11941388 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattc 11941339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 28194313 - 28194256
Alignment:
Q  164 atttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||| ||||||||||||||| |||||||||  |||||| |||||||||||||||||    
T  28194313 atttggcttgggatcttggagtgtgctcctcttaaggtcttaggttcgattctctctg 28194256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 34516586 - 34516537
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||||||    
T  34516586 ttggcttgggatcttggagtttgctcctccagaggtttcaggttcgattc 34516537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 5394036 - 5394096
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| ||| |||||||||||||||||||| | |||||||||||||||||| ||||| ||||    
T  5394036 ttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtc 5394096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 36242490 - 36242430
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| ||||||||||| | |||||||||| |||||||||||||||||||| ||||| ||||    
T  36242490 ttggcttgggatcttgaaatttgctcctccagaggtctcaggttcgattccctctggtgtc 36242430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 8192529 - 8192474
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||||||| |||||||||  |||||||||||||||||| |||||    
T  8192529 ttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctg 8192474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 8258925 - 8258972
Alignment:
Q  175 gatcttggagtttgctcctctagaggtctcaggttcgattctctctga 222  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  8258925 gatcttggagtttgctcctccagatgtctcaggttcgattccctctga 8258972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 35171831 - 35171874
Alignment:
Q  178 cttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||||||||||||||| |||||||||||||||||||| |||||    
T  35171831 cttggagtttgctcctccagaggtctcaggttcgattccctctg 35171874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 1191532 - 1191586
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| ||| |||||||||||||||||||| |||||||||||||||| ||| ||||    
T  1191532 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgtttccctct 1191586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 4852582 - 4852632
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||||||||||| | |||||||||||||||||| |||||    
T  4852582 ttggaatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 4852632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 15037985 - 15038027
Alignment:
Q  173 gggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  15037985 gggatcttggagtttgctcctccaaaggtctcaggttcgattc 15038027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 6714459 - 6714410
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| ||| |||||||||||||||||||| |||||||||||||| |||||    
T  6714459 ttggcttgagatcttggagtttgctcctccagaggtctcaggtttgattc 6714410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 32526258 - 32526214
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    ||||||||||| |||||||||||||  ||||||||||||||||||    
T  32526258 ttgggatcttgaagtttgctcctctcaaggtctcaggttcgattc 32526214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 6099568 - 6099517
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctc 217  Q
    |||| |||||| |||||||| |||||||||  ||||||||||||||||||||    
T  6099568 ttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctc 6099517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 13266509 - 13266564
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||| ||||||||| ||||||||| ||||||||||| ||||||||| |||||    
T  13266509 ttggcttgagatcttggaatttgctcctttagaggtctcatgttcgattcactctg 13266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 19606023 - 19605969
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||||||||  ||||||||  |||||||||||||||||| ||||    
T  19606023 ttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgattccctct 19605969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 32845115 - 32845165
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||||| | | || ||||||||||||| |||||    
T  32845115 ttgggatcttggagtttgctcctccaaaagtttcaggttcgattccctctg 32845165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 29361572 - 29361632
Alignment:
Q  165 tttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    ||||| |||||||||||||||||||||||| | || ||||||| ||||||  ||||||||||    
T  29361572 tttggattgggatcttggagtttgctcctccaaagatctcagg-tcgatttcctctgatgtc 29361632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 38784358 - 38784309
Alignment:
Q  165 tttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||||||| ||||||||||||||||||||||  || ||| ||||||||||    
T  38784358 tttgggttaggatcttggagtttgctcctctcaagttctaaggttcgatt 38784309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 1845835 - 1845775
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| |||||||||||||||||||||||||| |  | |||| ||||||||  |||||||||    
T  1845835 ttggcttgggatcttggagtttgctcctctaaaaatttcagattcgattcattctgatgtc 1845775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 4567615 - 4567567
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| ||||||||||| |||||||||||  ||| |||||||||||||||    
T  4567615 ttggcttgggatcttgaagtttgctccttcagaagtctcaggttcgatt 4567567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 18708501 - 18708553
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgat 223  Q
    ||||||||||||||| || ||||||  ||||||||||||||| || |||||||    
T  18708501 ttgggatcttggagtgtgttcctctcaaggtctcaggttcgactccctctgat 18708553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 27269528 - 27269468
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| |||||||||| ||||||||||||||| |||| | ||||| ||||| ||||| ||||    
T  27269528 ttggcttgggatcttcgagtttgctcctctaaaggttttaggtttgattccctctggtgtc 27269468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 36179903 - 36179955
Alignment:
Q  174 ggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    ||||||||||||||  || ||| ||||||||| ||||||||||| ||||||||    
T  36179903 ggatcttggagttttttcatctcgaggtctcatgttcgattctccctgatgtc 36179955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 38341761 - 38341805
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    ||||||||||| |||||||||||||  ||||||||| ||||||||    
T  38341761 ttgggatcttgaagtttgctcctctcaaggtctcagattcgattc 38341805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 40997523 - 40997479
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||||||||||||||||||||| | |||||||| |||| ||||    
T  40997523 ttgggatcttggagtttgctcctccaaaggtctcatgttcaattc 40997479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 1234 - 1179
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  1234 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 1179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 9477 - 9422
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  9477 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 9422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 12178 - 12130
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||    
T  12178 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 12130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 8585 - 8530
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  8585 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattatctctg 8530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 21362967 - 21363022
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  21362967 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtc 21363022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 26108311 - 26108366
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  26108311 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 26108366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 30807331 - 30807276
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  30807331 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 30807276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 35492930 - 35492985
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  35492930 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 35492985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 40940844 - 40940899
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  40940844 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 40940899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 45529932 - 45529877
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  45529932 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 45529877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 46576367 - 46576422
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  46576367 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 46576422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 53234088 - 53234033
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  53234088 ttggcttgggatcttggagtttgctcctccagaagtctcaggttcgattctctctg 53234033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 25289892 - 25289838
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  25289892 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctct 25289838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 39042025 - 39041975
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  39042025 ttgggatcttggagtttgctcctccagaggtctcaagttcgattctctctg 39041975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 52821808 - 52821758
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  52821808 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 52821758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 7485698 - 7485645
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatg 224  Q
    |||||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  7485698 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatg 7485645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 25379780 - 25379829
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  25379780 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 25379829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 53424354 - 53424305
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  53424354 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 53424305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 26174132 - 26174180
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||    
T  26174132 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 26174180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 52455820 - 52455772
Alignment:
Q  173 gggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  52455820 gggatcttggagtttgctcctccagaggtctcaggttcgattccctctg 52455772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 8456328 - 8456273
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||| ||||||||||||| |||||||||||||||||||| |||||    
T  8456328 ttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccctctg 8456273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 29915442 - 29915399
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  29915442 ttgggatcttggagtttgctcctccagaggtctcaggttcgatt 29915399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 29964595 - 29964552
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  29964595 ttgggatcttggagtttgctcctccagaggtctcaggttcgatt 29964552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 34492753 - 34492698
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  34492753 ttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctg 34492698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 15566677 - 15566623
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| ||| |||||||||||||||||||| |||||||||||||||||||| ||||    
T  15566677 ttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctct 15566623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 49258440 - 49258386
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  49258440 ttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccctct 49258386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 30257643 - 30257692
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  30257643 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 30257692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 9853640 - 9853684
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||||||||||||||||||||| | ||||||||||||||||||    
T  9853640 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 9853684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 40133627 - 40133567
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| ||||||| |||||||||||||||| | |||||||||||||||||| ||||| ||||    
T  40133627 ttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtc 40133567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 48977412 - 48977456
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||||||||||||||||||||| | ||||||||||||||||||    
T  48977412 ttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 48977456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 215
Target Start/End: Original strand, 1692863 - 1692902
Alignment:
Q  176 atcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  1692863 atcttggagtttgctcctccagaggtctcaggttcgattc 1692902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 38732990 - 38733045
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| ||||||||||||| ||||| ||||||||||||| |||||||||||| ||||    
T  38732990 ttggaatcttggagtttgttcctccagaggtctcaggtccgattctctctgttgtc 38733045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 45272594 - 45272539
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| ||| ||||||| |||||||| |||||    
T  45272594 ttggcttgggatcttggagtttgctcctccagatgtctcagtttcgattccctctg 45272539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 10083997 - 10083943
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||||||||||||||||| ||||| |||||||| ||||| ||||    
T  10083997 ttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctct 10083943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 10190920 - 10190866
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||| |||||||||||||||||||||||| ||||| |||||||| ||||| ||||    
T  10190920 ttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctct 10190866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 7470384 - 7470339
Alignment:
Q  175 gatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||||||||||||||||||| | |||||||||||||||||| ||||    
T  7470384 gatcttggagtttgctcctccaaaggtctcaggttcgattccctct 7470339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 19857078 - 19857119
Alignment:
Q  174 ggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  19857078 ggatcttggagtttgctcctccagatgtctcaggttcgattc 19857119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 49167075 - 49167135
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| ||| |||||||||||||||||||| | || | ||||||||||||||||||| ||||    
T  49167075 ttggcttgagatcttggagtttgctcctccaaagatatcaggttcgattctctctggtgtc 49167135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 50583011 - 50583059
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||    
T  50583011 ttggtttgggatcttggagtttgctcctcttaaggtttcaggttcgatt 50583059  T

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Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 31538008 - 31537961
Alignment:
Q  174 ggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||||||||||||||||||| |||||||||| ||| ||||| |||||    
T  31538008 ggatcttggagtttgctcctccagaggtctcatgtttgattccctctg 31537961  T

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Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 36660797 - 36660840
Alignment:
Q  174 ggatcttggagtttgctcctctagaggtctcaggttcgattctc 217  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||    
T  36660797 ggatcttggagtttgctcctctcaaggtctcaggttcaattctc 36660840  T

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Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 18177056 - 18177010
Alignment:
Q  175 gatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||||||||||||||| || |||||| ||||||||||||| |||||    
T  18177056 gatcttggagtttgctcttccagaggtatcaggttcgattccctctg 18177010  T

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Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 39253728 - 39253782
Alignment:
Q  171 ttgggatcttggagtttgctcctctaga-ggtctcaggttcgattctctctgatg 224  Q
    ||||||||| ||||| |||||||||  | ||||||||||||||||||||||||||    
T  39253728 ttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctgatg 39253782  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 10499159 - 10499098
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctc-tagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| ||||||||| ||||| ||||| || | ||||||||||||||||||||||| ||||||    
T  10499159 ttggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtc 10499098  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 32151448 - 32151497
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||||||||||||||||||||||| | |||| |||  |||||||||||||    
T  32151448 ttgggatcttggagtttgctcctccaaaggtttcaaattcgattctctct 32151497  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 10445189 - 10445133
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctc-tagaggtctcaggttcgattctctctg 221  Q
    |||| |||||| || ||||| |||||||| | |||||||||||||||||||||||||    
T  10445189 ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 10445133  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 14343466 - 14343418
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| ||| |||||||||||||||||||| ||| ||||||| |||||||    
T  14343466 ttggtttgagatcttggagtttgctcctccagatgtctcagattcgatt 14343418  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 25344230 - 25344186
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||||||||| ||||||||||||| |||| ||||||||| |||||    
T  25344230 ttgggatcttcgagtttgctcctccagagatctcaggtttgattc 25344186  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 47454667 - 47454615
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctc-tagaggtctcaggttcgattctc 217  Q
    |||| ||| ||||||||||| |||||||| | |||||||||||||||||||||    
T  47454667 ttggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 47454615  T

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Target: scaffold0068 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 41817 - 41768
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctct 220  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  41817 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccctct 41768  T

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Target: scaffold0459 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 10871 - 10823
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||    
T  10871 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 10823  T

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Target: scaffold0576 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 5260 - 5205
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  5260 ttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctg 5205  T

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Target: scaffold0328 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 15016 - 15065
Alignment:
Q  172 tgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| |||||    
T  15016 tgggatcttggagtttgctcctccagaggtctcaggttcaattccctctg 15065  T

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Target: scaffold0217 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 7487 - 7438
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  7487 ttggcttgggatcttggagtttgctcctccagagatctcaggttcgattc 7438  T

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Target: scaffold0717 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 136 - 76
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctgatgtc 226  Q
    |||| ||| ||||||||||||||||| || |||||||||||||||||||| |||| |||||    
T  136 ttggcttgtgatcttggagtttgctcgtccagaggtctcaggttcgattccctcttatgtc 76  T

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Target: scaffold0460 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 8350 - 8302
Alignment:
Q  173 gggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  8350 gggatcttggagtttgctcctccagaggtctcaagttcgattccctctg 8302  T

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Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 40352 - 40399
Alignment:
Q  174 ggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||    
T  40352 ggatcttggagtttgctccttcagaggtctcaggttcgattccctctg 40399  T

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Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 53049 - 52994
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| |||||||||||||||||||||||| |||||  ||||||||||||| |||||    
T  53049 ttggcttgggatcttggagtttgctcctccagaggcttcaggttcgattccctctg 52994  T

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Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 97544 - 97489
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||||| |||||||||||| | |||||||||||||||||| |||||    
T  97544 ttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctg 97489  T

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Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 66781 - 66830
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| |||||||||||||||||||||||| | |||||||| |||||||||    
T  66781 ttggcttgggatcttggagtttgctcctccaaaggtctcacgttcgattc 66830  T

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Target: scaffold0299 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 11554 - 11610
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctc-tagaggtctcaggttcgattctctctg 221  Q
    |||| ||||||||| ||||| |||||||| | |||||||||||||||||||||||||    
T  11554 ttggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 11610  T

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Target: scaffold0240 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 12927 - 12884
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgatt 214  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||    
T  12927 ttgggatcttggagttcgctcctccagagatctcaggttcgatt 12884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 20246 - 20296
Alignment:
Q  171 ttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctg 221  Q
    |||||||||||||||||||||||  | |||||||||||| ||||| |||||    
T  20246 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccctctg 20296  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 27795 - 27844
Alignment:
Q  166 ttgggttgggatcttggagtttgctcctctagaggtctcaggttcgattc 215  Q
    |||| ||||||| |||||||||||||||||  ||||||| ||||||||||    
T  27795 ttggtttgggattttggagtttgctcctctcaaggtctcgggttcgattc 27844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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