View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_262 (Length: 240)
Name: NF10233A_low_262
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_262 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 43669749 - 43669522
Alignment:
| Q |
1 |
gtactaaatcatcatgcaatgcttaaccataaatatgcaatcattataatgtgnnnnnnnnnnnnngcaagacaacttgggatctgaatgaattggatgc |
100 |
Q |
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| T |
43669749 |
gtactaaatcatcatgcaatgcttaaccataaatatgcaatcattataatgtgttttttcatttttgcaagacaacttgggatctgaatgaattggatgc |
43669650 |
T |
|
| Q |
101 |
aaaacatggtcggtacatttaagggtatccgattaagatcaatccatttaaatttcttaatggaacagtcacgtatacatcaatgagtaaaccaccaatt |
200 |
Q |
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| T |
43669649 |
aaaacatggtcggtacatttaagggtatccgattaagatcaatccatttaaatttcttaatggaacagtcacatatacatcaatgagtaaaccaccaatt |
43669550 |
T |
|
| Q |
201 |
tgaaccaagtctttgtaagccactttca |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
43669549 |
tgaaccaagtctttgtaagccactttca |
43669522 |
T |
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