View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_276 (Length: 238)
Name: NF10233A_low_276
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_276 |
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Alignment Details
Target: chr3 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 36 - 202
Target Start/End: Complemental strand, 25697071 - 25696905
Alignment:
| Q |
36 |
gatggacatcaatcctagtccaaaaattgatcttgtctatcaaatatattcatatcaatgtagcagcaagactttagattgaacaccaacacacgtggtt |
135 |
Q |
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| T |
25697071 |
gatgcacatcaatcctagtccaaaaattgatcttgtctatcaaatatattcatatcaatgtagcaccaagaatttagattgaacaccaacacacgtggtt |
25696972 |
T |
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| Q |
136 |
acatccagttttcgaaaattattaccaatgtctacttattattgtcagtgtcgtgtctgatgtccat |
202 |
Q |
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| T |
25696971 |
acatctagttttcgaaaattattaccaatgtctacttattattgtcagtgtcgtgtctgatgtccat |
25696905 |
T |
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