View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_283 (Length: 236)
Name: NF10233A_low_283
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_283 |
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Alignment Details
Target: chr7 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 9457146 - 9457309
Alignment:
| Q |
30 |
tgtttactttatagatgatcattagattgtaataaaaatcacatacagccatttcggaatacggtaataaaaatctcaacactcattttgttaccgatct |
129 |
Q |
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| T |
9457146 |
tgtttactttatagatgatcattagattgtaataaaaatcacatatagccgttttggaatacggtaataaaaatctcaacactcattttgttaccgatct |
9457245 |
T |
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| Q |
130 |
caagtttgtgttttgtgtaggggagagataaaatgtttataaattacaatttatcttgattttc |
193 |
Q |
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| T |
9457246 |
caagtttgtgttttgcgtaggggagagataaaatgtttataaattacaattaatcttgattttc |
9457309 |
T |
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