View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10233A_low_284 (Length: 236)

Name: NF10233A_low_284
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10233A_low_284
NF10233A_low_284
[»] chr7 (6 HSPs)
chr7 (3-236)||(4008418-4008651)
chr7 (3-236)||(4013810-4014043)
chr7 (94-233)||(15902797-15902936)
chr7 (94-200)||(24339650-24339756)
chr7 (94-142)||(5409787-5409835)
chr7 (121-233)||(26329354-26329466)
[»] scaffold0376 (1 HSPs)
scaffold0376 (116-200)||(6320-6404)
[»] chr5 (2 HSPs)
chr5 (94-200)||(32766888-32766994)
chr5 (95-222)||(30098312-30098439)
[»] chr1 (4 HSPs)
chr1 (101-201)||(6612123-6612223)
chr1 (94-200)||(9828052-9828158)
chr1 (82-142)||(1486648-1486708)
chr1 (119-200)||(9629870-9629951)
[»] chr8 (4 HSPs)
chr8 (124-216)||(4122224-4122316)
chr8 (94-142)||(22197687-22197735)
chr8 (98-150)||(12570458-12570510)
chr8 (98-150)||(12570684-12570736)
[»] chr3 (2 HSPs)
chr3 (101-200)||(8039787-8039886)
chr3 (82-200)||(17005552-17005670)
[»] chr6 (3 HSPs)
chr6 (82-200)||(10294115-10294233)
chr6 (82-228)||(25038004-25038150)
chr6 (153-201)||(32320673-32320721)
[»] chr2 (1 HSPs)
chr2 (82-200)||(18420367-18420485)
[»] scaffold0053 (1 HSPs)
scaffold0053 (94-142)||(8853-8901)
[»] scaffold0044 (1 HSPs)
scaffold0044 (119-199)||(53189-53269)
[»] chr4 (2 HSPs)
chr4 (94-142)||(3947717-3947765)
chr4 (94-142)||(23292942-23292990)


Alignment Details
Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 4008418 - 4008651
Alignment:
Q  3 atgtcgaagaatatgaaagacaactccgtcttgtacgttgtcaaactgctgcacaacaagctcaataaactgccacacagaagcacatactctcctcaga 102  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4008418 atgttgaaaaatatgaaagacaactccgtcttgtacgttgtcaaactgctgcacaacaagctcaataatctgccacacagaagcacatactctcctcaga 4008517  T
Q  103 ttaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatgcaattttatcaaattattaaa 202  Q
    ||||| |||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  4008518 ttaggtgtatcctggcgtcggacacgtgccgtgtcggacatcgatacaataccgacacatacaattacattgaatcatgtaattttatcaaattattaaa 4008617  T
Q  203 gatatcgacgtatcagtgtctgtgtcatgtctga 236  Q
    | | ||  ||| ||||| |||||||||| |||||    
T  4008618 ggtgtctgcgtgtcagtttctgtgtcatatctga 4008651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 4013810 - 4014043
Alignment:
Q  3 atgtcgaagaatatgaaagacaactccgtcttgtacgttgtcaaactgctgcacaacaagctcaataaactgccacacagaagcacatactctcctcaga 102  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4013810 atgttgaaaaatatgaaagacaactccgtcttgtacgttgtcaaactgctgcacaacaagctcaataatctgccacacagaagcacatactctcctcaga 4013909  T
Q  103 ttaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatgcaattttatcaaattattaaa 202  Q
    ||||| |||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  4013910 ttaggtgtatcctggcgtcggacacgtgccgtgtcggacatcgatacaataccgacacatacaattacattgaatcatgtaattttatcaaattattaaa 4014009  T
Q  203 gatatcgacgtatcagtgtctgtgtcatgtctga 236  Q
    | | ||  ||| ||||| |||||||||| |||||    
T  4014010 ggtgtctgcgtgtcagtttctgtgtcatatctga 4014043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 233
Target Start/End: Complemental strand, 15902936 - 15902797
Alignment:
Q  94 ctcctcagattaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatgcaattttatcaa 193  Q
    ||||||| |||| |||| ||||||  |||| || ||||| ||||||| | ||| |||| ||||||||||| ||| ||| | ||| |||  ||||||||||    
T  15902936 ctcctcaaattaagcgtgtcctggtctcgggcatgtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaa 15902837  T
Q  194 attattaaagatatcgacgtatcagtgtctgtgtcatgtc 233  Q
    |||||||  | | ||| | | |||||||||||||| ||||    
T  15902836 attattattggtgtcggcatgtcagtgtctgtgtcgtgtc 15902797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 24339756 - 24339650
Alignment:
Q  94 ctcctcagattaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatgcaattttatcaa 193  Q
    |||||| |||||||||| ||| || |||||| ||||||| ||||||||| ||| || | |||||||| |  ||| ||| ||||| |||  ||||| ||||    
T  24339756 ctcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaa 24339657  T
Q  194 attatta 200  Q
    |||||||    
T  24339656 attatta 24339650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 5409787 - 5409835
Alignment:
Q  94 ctcctcagattaggcgtatcctggcgtcggacacgtgtcatgtccgaca 142  Q
    |||||| |||||||||| ||| || |||||||||||||| |||||||||    
T  5409787 ctcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgaca 5409835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 233
Target Start/End: Original strand, 26329354 - 26329466
Alignment:
Q  121 cggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatgcaattttatcaaattattaaagatatcgacgtatcagtg 220  Q
    |||||||||||| |||| |||| ||| || |  |||||||||| ||| ||| |||||  ||   |||| |||||||||||| ||| ||| ||| ||||||    
T  26329354 cggacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtg 26329453  T
Q  221 tctgtgtcatgtc 233  Q
    |||||||| ||||    
T  26329454 tctgtgtcgtgtc 26329466  T

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Target: scaffold0376 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 6404 - 6320
Alignment:
Q  116 ggcgtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatgcaattttatcaaattatta 200  Q
    |||||||||| |||||| || || ||| |||||| | ||||||||||| ||| ||||||||| |||||||||| |||||||||||    
T  6404 ggcgtcggacccgtgtcgtgccccacaccgatacgacaccgacacatataattacattgaattatgcaattttgtcaaattatta 6320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 32766888 - 32766994
Alignment:
Q  94 ctcctcagattaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatgcaattttatcaa 193  Q
    ||||||||||||| |||||||||| |||||||||||||| | | ||||| ||| || | ||  ||||||| ||| |||||||||  ||| ||||| ||||    
T  32766888 ctcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacacgacacaaacacatataattacattgaattgtgcgattttctcaa 32766987  T
Q  194 attatta 200  Q
    |||||||    
T  32766988 attatta 32766994  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 222
Target Start/End: Complemental strand, 30098439 - 30098312
Alignment:
Q  95 tcctcagattaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatgcaattttatcaaa 194  Q
    ||||| ||||||| || |||||| ||| |||||||||| |||||||||  ||  | |||||||||  || ||| ||||||||| |||  ||||| |||||    
T  30098439 tcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgactcgataccgacatctataattacattgaattatgtgattttctcaaa 30098340  T
Q  195 ttattaaagatatcgacgtatcagtgtc 222  Q
    ||||||| | | ||| ||| ||||||||    
T  30098339 ttattaacggtttcgtcgtgtcagtgtc 30098312  T

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Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 6612123 - 6612223
Alignment:
Q  101 gattaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatgcaattttatcaaattatta 200  Q
    |||||||||| |||||| ||||||||| | || ||||||||||||| || | |||||||| |  ||| ||| ||||| ||| |||||| |||||||||||    
T  6612123 gattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattatta 6612222  T
Q  201 a 201  Q
    |    
T  6612223 a 6612223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 9828158 - 9828052
Alignment:
Q  94 ctcctcagattaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatgcaattttatcaa 193  Q
    |||||| |||||| ||| ||| || |||||||||||||| |||| ||||  || || | ||||||||||| ||| ||| ||||| |||  ||||||||||    
T  9828158 ctcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgattttatcaa 9828059  T
Q  194 attatta 200  Q
    |||||||    
T  9828058 attatta 9828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 1486648 - 1486708
Alignment:
Q  82 gaagcacatactctcctcagattaggcgtatcctggcgtcggacacgtgtcatgtccgaca 142  Q
    |||||||| || |||||| |||||||||| ||| || |||||||||||||| |||||||||    
T  1486648 gaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgaca 1486708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 9629870 - 9629951
Alignment:
Q  119 gtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatgcaattttatcaaattatta 200  Q
    |||||||| ||||| ||||||||||||| || | |||||||| || ||| ||| ||||| ||   |||||||||||||||||    
T  9629870 gtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattatta 9629951  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 4122224 - 4122316
Alignment:
Q  124 acacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatgcaattttatcaaattattaaagatatcgacgtatc 216  Q
    ||||||||| |||  ||||| || |||| ||||||||||| ||| ||| ||||| ||  ||||||||| ||||||||| ||| ||||||||||    
T  4122224 acacgtgtcgtgtttgacattgacacaacaccgacacatataattacaatgaattatataattttatctaattattaatgatgtcgacgtatc 4122316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 22197687 - 22197735
Alignment:
Q  94 ctcctcagattaggcgt-atcctggcgtcggacacgtgtcatgtccgaca 142  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  22197687 ctcctcagattaggcgtgatcc-ggtgtcggacacgtgtcatgtccgaca 22197735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 12570458 - 12570510
Alignment:
Q  98 tcagattaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgataca 150  Q
    ||||||||||||| |||||| |||||||||||||  |||| |||| |||||||    
T  12570458 tcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgataca 12570510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 12570684 - 12570736
Alignment:
Q  98 tcagattaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgataca 150  Q
    ||||||||||||| |||||| |||||||||||||  |||| |||| |||||||    
T  12570684 tcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgataca 12570736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 200
Target Start/End: Original strand, 8039787 - 8039886
Alignment:
Q  101 gattaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatgcaattttatcaaattatta 200  Q
    ||||| |||| ||| || |||||||| || |||||||||||| ||| || | ||||||||||| ||| ||| ||||| ||  |||||| |||||||||||    
T  8039787 gattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattatta 8039886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 200
Target Start/End: Original strand, 17005552 - 17005670
Alignment:
Q  82 gaagcacatactctcctcagattaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatg 181  Q
    |||||||| || |||||| ||||||  || |||||| ||| ||||||||| ||||| |||| | | |||| |||||||| || ||| ||| ||||| ||     
T  17005552 gaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaattata 17005651  T
Q  182 caattttatcaaattatta 200  Q
      |||||||||||||||||    
T  17005652 tgattttatcaaattatta 17005670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 200
Target Start/End: Complemental strand, 10294233 - 10294115
Alignment:
Q  82 gaagcacatactctcctcagattaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatg 181  Q
    |||||||| || |||||||||||||  || |||| |  |||||||| |||| ||||||||| | | || | ||||||||||| ||| ||||||||  |||    
T  10294233 gaagcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacacgacaccgacacatataattacattgaaatatg 10294134  T
Q  182 caattttatcaaattatta 200  Q
    | ||| | |||||||||||    
T  10294133 cgattatctcaaattatta 10294115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 228
Target Start/End: Original strand, 25038004 - 25038150
Alignment:
Q  82 gaagcacatactctcctcagattaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatg 181  Q
    ||||||||||| || ||||| | | |||| | |||| |||||||||||||| |||| |||| | | ||||||||||||  |  ||| ||| | ||| |||    
T  25038004 gaagcacatacacttctcaggtcatgcgtgttctggtgtcggacacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatg 25038103  T
Q  182 caattttatcaaattattaaagatatcgacgtatcagtgtctgtgtc 228  Q
     |||||| |||||||||||| | | || |||| ||||| ||||||||    
T  25038104 taattttctcaaattattaacggtgtcaacgtgtcagtatctgtgtc 25038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 32320673 - 32320721
Alignment:
Q  153 accgacacatacaatgacattgaatcatgcaattttatcaaattattaa 201  Q
    ||||| ||||| ||||||||||||| |||  ||||||||||||||||||    
T  32320673 accgatacatataatgacattgaattatgtgattttatcaaattattaa 32320721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 200
Target Start/End: Original strand, 18420367 - 18420485
Alignment:
Q  82 gaagcacatactctcctcagattaggcgtatcctggcgtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatg 181  Q
    |||||||| || || ||| |||||||||| || |   |||| |||| ||||||||||||||| || |||| |||||||| || |||  |||||||| |||    
T  18420367 gaagcacagacacttctcggattaggcgtgtcataatgtcgaacacttgtcatgtccgacatggacacaacaccgacacttataattgcattgaattatg 18420466  T
Q  182 caattttatcaaattatta 200  Q
      ||||| |||||||||||    
T  18420467 tgattttctcaaattatta 18420485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 8901 - 8853
Alignment:
Q  94 ctcctcagattaggcgtatcctggcgtcggacacgtgtcatgtccgaca 142  Q
    ||||||||||||||||| ||  || |||||||||||||| |||||||||    
T  8901 ctcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgaca 8853  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 53269 - 53189
Alignment:
Q  119 gtcggacacgtgtcatgtccgacatcgatacaataccgacacatacaatgacattgaatcatgcaattttatcaaattatt 199  Q
    |||||||||||||||||||||||| ||| ||   |||||||| || ||| ||| ||||| |||  ||||| ||||||||||    
T  53269 gtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 3947717 - 3947765
Alignment:
Q  94 ctcctcagattaggcgtatcctggcgtcggacacgtgtcatgtccgaca 142  Q
    |||||| ||||||| || |||||| |||||||||||||| |||||||||    
T  3947717 ctcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgaca 3947765  T

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Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 23292942 - 23292990
Alignment:
Q  94 ctcctcagattaggcgtatcctggcgtcggacacgtgtcatgtccgaca 142  Q
    |||||| |||||||||| ||| || |||||||||||||| |||||||||    
T  23292942 ctcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgaca 23292990  T

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