View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_300 (Length: 231)
Name: NF10233A_low_300
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_300 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 4 - 211
Target Start/End: Complemental strand, 47102275 - 47102068
Alignment:
| Q |
4 |
aatatatataagaaagtaaaaatacaaacagttatatcataaaaggaagaaaaactagctagttccaacgactgcgcaacaaagttaagcacaacattta |
103 |
Q |
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| T |
47102275 |
aatatatataagaaagtaaaaatacaaacagttatatcataaaaggaagaaaaactagctagttccaacgactgcgcaacaaagttaagcacaacattta |
47102176 |
T |
|
| Q |
104 |
tttgatagggtacttgtttaggtgaaaacgtttaatagtttgttgtactggctaaactttgagttaatcttttagttcgatcgccgacagtgtacgtaca |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47102175 |
tttgatagggtacttgtttaggtgaaaacgtttaatagtttgttgtactggctaaactttgagttaatcttttagttcgatcgccgacagtgtacgtaca |
47102076 |
T |
|
| Q |
204 |
cttaatca |
211 |
Q |
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|||||||| |
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| T |
47102075 |
cttaatca |
47102068 |
T |
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