View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10233A_low_304 (Length: 230)

Name: NF10233A_low_304
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10233A_low_304
NF10233A_low_304
[»] chr3 (7 HSPs)
chr3 (28-201)||(3552086-3552259)
chr3 (71-196)||(215261-215386)
chr3 (71-196)||(31649807-31649932)
chr3 (76-196)||(13100643-13100763)
chr3 (144-196)||(295578-295631)
chr3 (144-196)||(9036825-9036878)
chr3 (112-199)||(21718881-21718969)
[»] chr7 (13 HSPs)
chr7 (72-196)||(23579869-23579994)
chr7 (71-196)||(23296621-23296746)
chr7 (71-188)||(7508560-7508678)
chr7 (114-196)||(24049568-24049650)
chr7 (71-196)||(24902223-24902349)
chr7 (71-196)||(10251558-10251684)
chr7 (136-196)||(9564373-9564434)
chr7 (105-196)||(15708289-15708380)
chr7 (29-79)||(9893970-9894020)
chr7 (143-195)||(9894053-9894106)
chr7 (144-196)||(13455099-13455152)
chr7 (74-182)||(26195376-26195484)
chr7 (145-196)||(11406938-11406990)
[»] chr6 (5 HSPs)
chr6 (71-196)||(20764910-20765035)
chr6 (71-187)||(30425062-30425179)
chr6 (138-196)||(16309340-16309399)
chr6 (141-199)||(21323259-21323318)
chr6 (71-196)||(26965485-26965611)
[»] chr1 (5 HSPs)
chr1 (74-196)||(17379540-17379663)
chr1 (71-196)||(8282038-8282163)
chr1 (74-196)||(17355748-17355871)
chr1 (71-196)||(51472008-51472133)
chr1 (136-196)||(17038364-17038425)
[»] chr5 (7 HSPs)
chr5 (71-196)||(24117713-24117839)
chr5 (71-124)||(20127185-20127238)
chr5 (136-192)||(20740917-20740974)
chr5 (112-196)||(26329170-26329255)
chr5 (74-196)||(11756127-11756246)
chr5 (144-196)||(13734961-13735014)
chr5 (141-196)||(17661396-17661452)
[»] chr4 (4 HSPs)
chr4 (71-196)||(10198167-10198292)
chr4 (71-196)||(16655255-16655380)
chr4 (144-196)||(8163903-8163956)
chr4 (144-196)||(21478226-21478279)
[»] chr8 (5 HSPs)
chr8 (76-196)||(12814513-12814633)
chr8 (102-187)||(23249862-23249947)
chr8 (143-196)||(23864454-23864508)
chr8 (114-186)||(33466119-33466191)
chr8 (136-195)||(1684094-1684154)
[»] scaffold0505 (1 HSPs)
scaffold0505 (76-192)||(9957-10073)
[»] chr2 (5 HSPs)
chr2 (76-187)||(31587602-31587713)
chr2 (74-196)||(24317108-24317230)
chr2 (141-201)||(19198264-19198325)
chr2 (112-196)||(21250154-21250239)
chr2 (144-196)||(36398782-36398835)
[»] scaffold0480 (1 HSPs)
scaffold0480 (102-196)||(11306-11400)
[»] scaffold0338 (1 HSPs)
scaffold0338 (144-196)||(16201-16254)
[»] scaffold0143 (1 HSPs)
scaffold0143 (114-186)||(36425-36497)
[»] scaffold0064 (1 HSPs)
scaffold0064 (136-196)||(45846-45907)
[»] scaffold0520 (1 HSPs)
scaffold0520 (140-195)||(5537-5593)


Alignment Details
Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 28 - 201
Target Start/End: Original strand, 3552086 - 3552259
Alignment:
Q  28 gaagcagagagaaggttctgtttgttggagtgagtctctattcttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctt 127  Q
    |||||| |||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3552086 gaagcaaagagaaggttctatttattggagtgagtctccattcttgtgtttgaaggtaacttcaccatattaagttgtaatcatataatcacaggggctt 3552185  T
Q  128 tggttaatttgtaggaagtgagatggatctcagatcaaggcgttcctaagttgaagtcaagacgggtagatctt 201  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  3552186 tggttaatttgtaggaagtgagatggatctcagatcaaggagttcctaagttgaagtcaagacgagtaggtctt 3552259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 215261 - 215386
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagatg-gatctcagatcaaggcg 169  Q
    |||||||||||||||||||||  || || |||||||||| || ||||||||||||| || || | |||  |||||||||||| ||||||| ||| ||  |    
T  215261 ttgtgtttgaaggtaacttcaatattttgagttgtaatcgtaaaatcacaggggctgtgattga-ttgagggaagtgagatgagatctcatatctagaag 215359  T
Q  170 ttcctaagttgaagtcaagacgggtag 196  Q
    |||||| ||||||||||| ||||||||    
T  215360 ttcctaggttgaagtcaatacgggtag 215386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 31649932 - 31649807
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagat-ggatctcagatcaaggcg 169  Q
    |||| ||||||||||| ||||||||||| ||||||||||  |||||| |||||| | || || | |||  ||||||||||| |||||||||||  |||      
T  31649932 ttgtctttgaaggtaatttcaccatattgagttgtaatctgataatcgcaggggttgtgattga-ttgagggaagtgagatgggatctcagatataggat 31649834  T
Q  170 ttcctaagttgaagtcaagacgggtag 196  Q
    || ||| ||||||||||||||||||||    
T  31649833 tttctaggttgaagtcaagacgggtag 31649807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 196
Target Start/End: Original strand, 13100643 - 13100763
Alignment:
Q  76 tttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagat-ggatctcagatcaaggcgttcct 174  Q
    |||||| ||| ||||| || ||| ||||||||||  ||||||||| ||| | ||||| ||| |  ||||||||||| |||||||||||| ||  ||||||    
T  13100643 tttgaatgtagcttcatcaaattgagttgtaatctgataatcacaagggatgtggttgatt-gagggaagtgagataggatctcagatctagaagttcct 13100741  T
Q  175 aagttgaagtcaagacgggtag 196  Q
    |  |||||||||||||||||||    
T  13100742 agattgaagtcaagacgggtag 13100763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 295631 - 295578
Alignment:
Q  144 agtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    |||||||||| |||||||||| ||| |||||||||||||| |||| ||||||||    
T  295631 agtgagatgggatctcagatctaggagttcctaagttgaaatcaatacgggtag 295578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 9036878 - 9036825
Alignment:
Q  144 agtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    |||||||||| |||||||||| ||| ||||||| ||||||||||| ||||||||    
T  9036878 agtgagatgggatctcagatctaggagttcctaggttgaagtcaatacgggtag 9036825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 199
Target Start/End: Original strand, 21718881 - 21718969
Alignment:
Q  112 ataatcacaggggctttggttaatttgtagga-agtgagatg-gatctcagatcaaggcgttcctaagttgaagtcaagacgggtagatc 199  Q
    ||||||||| ||||| ||||| | | |||||| ||||||||| ||||||||||| ||| ||||||| ||| ||||| |||||||||||||    
T  21718881 ataatcacatgggctatggttgact-gtaggatagtgagatgagatctcagatctaggagttcctaggttaaagtctagacgggtagatc 21718969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 196
Target Start/End: Original strand, 23579869 - 23579994
Alignment:
Q  72 tgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagatg-gatctcagatcaaggcgt 170  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||||||| | ||||||||| |||| |||||||||| |||| |||||| ||| ||    
T  23579869 tgtgtttgaaggtaagttcaccatattgagttgtaatcgtataatcacaggggatgtggttaattggtagaaagtgagatgagatcccagatctaggagt 23579968  T
Q  171 tcctaagttgaagtcaagacgggtag 196  Q
    || || |||||| |||||||||||||    
T  23579969 tcttaggttgaattcaagacgggtag 23579994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 23296746 - 23296621
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagatgg-atctcagatcaaggcg 169  Q
    |||| ||||||||||||||||||| ||| ||||||||||  ||||||| ||||| | ||||| |||  | ||||||||||||| |||||||||| ||| |    
T  23296746 ttgtttttgaaggtaacttcaccaaattgagttgtaatctaataatcataggggttgtggttgattgat-ggaagtgagatgggatctcagatctaggag 23296648  T
Q  170 ttcctaagttgaagtcaagacgggtag 196  Q
    |||||| ||||||||||||||||||||    
T  23296647 ttcctaggttgaagtcaagacgggtag 23296621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 188
Target Start/End: Complemental strand, 7508678 - 7508560
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatatt-aagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagatgg-atctcagatcaaggc 168  Q
    ||||||||||||||||||||||| |||| ||   ||||||  ||||||||||||||| ||||| |||    ||||||||||||| |||||||||| |||     
T  7508678 ttgtgtttgaaggtaacttcaccttattgaacaagtaatctgataatcacaggggctgtggttgattaag-ggaagtgagatgggatctcagatctagga 7508580  T
Q  169 gttcctaagttgaagtcaag 188  Q
    ||||||| ||||||||||||    
T  7508579 gttcctaggttgaagtcaag 7508560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 24049650 - 24049568
Alignment:
Q  114 aatcacaggggctttggttaatttgtaggaagtgagatg-gatctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    ||||||||||||| || ||| |||||||| ||||||||| ||||||||||| ||| ||||||| ||||||||||| ||||||||    
T  24049650 aatcacaggggctgtgatta-tttgtagggagtgagatgtgatctcagatctaggagttcctaggttgaagtcaatacgggtag 24049568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 24902349 - 24902223
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtagga-agtgagatgg-atctcagatcaaggc 168  Q
    |||||||||||||||||||||||||  |  |||  ||||  ||||||||| ||| | || || ||| |||||| |||||||||| |||||||||| |||     
T  24902349 ttgtgtttgaaggtaacttcaccattctgtgtttgaatctgataatcacaagggttgtgattgatt-gtaggatagtgagatgggatctcagatctagga 24902251  T
Q  169 gttcctaagttgaagtcaagacgggtag 196  Q
    ||||||| ||||||||| ||||||||||    
T  24902250 gttcctaggttgaagtctagacgggtag 24902223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 10251684 - 10251558
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagat-ggatctcagatcaaggcg 169  Q
    |||||||| |||||||||||| | |||| ||||||||||  ||||||||||||| | || || |||    | ||||||||| |||||||||||| | | |    
T  10251684 ttgtgtttaaaggtaacttcatcttattgagttgtaatctgataatcacaggggatgtgattgattgagtgaaagtgagatgggatctcagatctaagag 10251585  T
Q  170 ttcctaagttgaagtcaagacgggtag 196  Q
    ||| || ||||||||||| ||||||||    
T  10251584 ttcttatgttgaagtcaatacgggtag 10251558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 9564434 - 9564373
Alignment:
Q  136 ttgtaggaagtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    ||||||| |||||||||| |||||||||| ||| ||||||| |||||||||||| |||||||    
T  9564434 ttgtagggagtgagatgggatctcagatctaggagttcctaggttgaagtcaaggcgggtag 9564373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 15708380 - 15708289
Alignment:
Q  105 taatcctataatcacaggggctttggttaatttgtaggaagtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    ||||| |||||||||||||||| || || ||| |  ||||||||||||| |||||||||| ||| ||||||| ||| ||||||| ||||||||    
T  15708380 taatcatataatcacaggggctgtgattgatt-gagggaagtgagatgggatctcagatctaggagttcctaggttcaagtcaatacgggtag 15708289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 9893970 - 9894020
Alignment:
Q  29 aagcagagagaaggttctgtttgttggagtgagtctctattcttgtgtttg 79  Q
    ||||| |||||||||||||||| ||||| || |||||||||||||| ||||    
T  9893970 aagcaaagagaaggttctgtttattggaatgtgtctctattcttgtatttg 9894020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 9894053 - 9894106
Alignment:
Q  143 aagtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggta 195  Q
    ||||||||||| |||||||||| ||| ||||||| ||||||||||| |||||||    
T  9894053 aagtgagatgggatctcagatctaggagttcctaggttgaagtcaatacgggta 9894106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 13455099 - 13455152
Alignment:
Q  144 agtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    |||||||||| |||||||||| ||| ||||||| ||||||||| ||||||||||    
T  13455099 agtgagatgggatctcagatctaggagttcctaggttgaagtctagacgggtag 13455152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 182
Target Start/End: Original strand, 26195376 - 26195484
Alignment:
Q  74 tgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagatgg-atctcagatcaaggcgttc 172  Q
    |||||||||||||||||| | | || |||||| |||  ||||||||| ||||| || |||| |||  ||||||||||||| |||||||||  ||| ||||    
T  26195376 tgtttgaaggtaacttcatctttttgagttgtcatcagataatcacaagggctgtgattaa-ttgagggaagtgagatggaatctcagatttaggagttc 26195474  T
Q  173 ctaagttgaa 182  Q
    ||| ||||||    
T  26195475 ctaggttgaa 26195484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 11406938 - 11406990
Alignment:
Q  145 gtgagatgga-tctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    |||||||||| ||||||||| ||| ||||||| ||||||||||| ||||||||    
T  11406938 gtgagatggaatctcagatctaggagttcctaggttgaagtcaatacgggtag 11406990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 20764910 - 20765035
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagatg-gatctcagatcaaggcg 169  Q
    |||||||||||||||||||||||||||| | | ||||||  ||||||||||||| | ||||| | |||  |||||||||||| ||||||||||| | | |    
T  20764910 ttgtgtttgaaggtaacttcaccatattgaatagtaatctgataatcacaggggttgtggttga-ttgagggaagtgagatgagatctcagatctaagag 20765008  T
Q  170 ttcctaagttgaagtcaagacgggtag 196  Q
    ||| || ||||||||||||||||||||    
T  20765009 ttcttaggttgaagtcaagacgggtag 20765035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 187
Target Start/End: Complemental strand, 30425179 - 30425062
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagat-ggatctcagatcaaggcg 169  Q
    ||||||||||||||||||||| | |||| |||||||||   ||||||||||||| | || || |||    ||||||||||| |||||||||||| ||  |    
T  30425179 ttgtgtttgaaggtaacttcatcttattgagttgtaatttgataatcacaggggttgtgattgattgagtggaagtgagataggatctcagatctagaag 30425080  T
Q  170 ttcctaagttgaagtcaa 187  Q
    |||||| |||||||||||    
T  30425079 ttcctaggttgaagtcaa 30425062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 16309340 - 16309399
Alignment:
Q  138 gtaggaagtgagatg-gatctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    ||||| ||||||||| ||||||||||| | | ||||||| ||||||||||||||||||||    
T  16309340 gtagggagtgagatgagatctcagatctacgagttcctaggttgaagtcaagacgggtag 16309399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 21323259 - 21323318
Alignment:
Q  141 ggaagtgagatg-gatctcagatcaaggcgttcctaagttgaagtcaagacgggtagatc 199  Q
    |||||||||||| ||||||||||| ||| ||||||| ||||||||||| |||| ||||||    
T  21323259 ggaagtgagatgagatctcagatctaggagttcctaggttgaagtcaatacggttagatc 21323318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 26965485 - 26965611
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtagga-agtgagatgg-atctcagatcaaggc 168  Q
    |||||||||||||| |||||| ||| ||  |||  |||   ||||||||||||| | || || ||| |||||| |||||||||| |||||||||| |||     
T  26965485 ttgtgtttgaaggtcacttcatcattttgtgtttaaatttgataatcacaggggttgtgattgatt-gtaggatagtgagatgggatctcagatctagga 26965583  T
Q  169 gttcctaagttgaagtcaagacgggtag 196  Q
    ||||||| ||||||||| ||||||||||    
T  26965584 gttcctaggttgaagtctagacgggtag 26965611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 17379540 - 17379663
Alignment:
Q  74 tgtttgaaggtaacttcaccatattaagttgtaatcctataa-tcacaggggctttggttaatttgtaggaagtgagatgg-atctcagatcaaggcgtt 171  Q
    ||||||||||||||||||||||||| ||||| ||||  |||| ||||||||||| || || ||| |  ||||||||||||| |||||||||| ||| |||    
T  17379540 tgtttgaaggtaacttcaccatattgagttgaaatctgataaatcacaggggctgtgattgatt-gagggaagtgagatgggatctcagatctaggagtt 17379638  T
Q  172 cctaagttgaagtcaagacgggtag 196  Q
     ||| ||||||||||||||||||||    
T  17379639 tctaggttgaagtcaagacgggtag 17379663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 8282163 - 8282038
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagat-ggatctcagatcaaggcg 169  Q
    |||| ||||||||||||||||||||||| |||||||||   |||||||| |||| | || || | |||  ||||||||||| |||||||||||| |||      
T  8282163 ttgtctttgaaggtaacttcaccatattgagttgtaatttgataatcacgggggttgtgattga-ttgagggaagtgagatgggatctcagatctaggaa 8282065  T
Q  170 ttcctaagttgaagtcaagacgggtag 196  Q
    |||||| |||||||| |||||||||||    
T  8282064 ttcctaggttgaagttaagacgggtag 8282038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 17355748 - 17355871
Alignment:
Q  74 tgtttgaaggtaacttcaccatattaagttgtaatcctataa-tcacaggggctttggttaatttgtaggaagtgagatgg-atctcagatcaaggcgtt 171  Q
    ||||||||||||||||||||||||| |||||  |||  |||| ||||||||| | || || ||| |  ||||||||||||| |||||||||| | | |||    
T  17355748 tgtttgaaggtaacttcaccatattgagttgagatctgataaatcacaggggttgtgattgatt-gagggaagtgagatgggatctcagatctatgagtt 17355846  T
Q  172 cctaagttgaagtcaagacgggtag 196  Q
    |||| ||||||||||||||||||||    
T  17355847 cctaggttgaagtcaagacgggtag 17355871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 51472008 - 51472133
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagat-ggatctcagatcaaggcg 169  Q
    |||| ||||||||||||||||||| ||  |||| |||||  ||||||| || || | |||||  ||||  ||||||||||| |||||||||||| ||| |    
T  51472008 ttgtctttgaaggtaacttcaccaaatcgagttataatctgataatcatagaggttgtggttg-tttgagggaagtgagattggatctcagatctaggag 51472106  T
Q  170 ttcctaagttgaagtcaagacgggtag 196  Q
    |||||| |||||| | |||||||||||    
T  51472107 ttcctaggttgaaataaagacgggtag 51472133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 17038425 - 17038364
Alignment:
Q  136 ttgtaggaagtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    ||||||| || ||||||| |||||||||| ||| ||||||| ||||||||||||| ||||||    
T  17038425 ttgtagggagagagatgggatctcagatctaggagttcctaggttgaagtcaagatgggtag 17038364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 24117839 - 24117713
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagat-ggatctcagatcaaggcg 169  Q
    ||||||||||||||||||||| | |||| ||||||||||  ||||||||| ||||| || || |||    ||||||||||| |||||||||||||||       
T  24117839 ttgtgtttgaaggtaacttcatcttattgagttgtaatctgataatcacaagggctgtgattgattgagtggaagtgagatgggatctcagatcaagaaa 24117740  T
Q  170 ttcctaagttgaagtcaagacgggtag 196  Q
    |||||| ||| ||||||| ||||||||    
T  24117739 ttcctaggttaaagtcaatacgggtag 24117713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 20127238 - 20127185
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacagggg 124  Q
    |||| ||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  20127238 ttgtctttgaaggtaacttcaccatattgagttgtaatctgataatcacagggg 20127185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 20740917 - 20740974
Alignment:
Q  136 ttgtaggaagtgagatg-gatctcagatcaaggcgttcctaagttgaagtcaagacgg 192  Q
    ||||||| ||||||||| ||||||||||| ||| ||||||| ||||||||||||||||    
T  20740917 ttgtagggagtgagatgagatctcagatctaggagttcctaggttgaagtcaagacgg 20740974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 26329170 - 26329255
Alignment:
Q  112 ataatcacaggggctttggttaatttgtagga-agtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    ||||||||||||||| ||||| ||| || ||| |||||||||| |||||||||| ||| ||||||| |||||| |||| ||||||||    
T  26329170 ataatcacaggggctgtggttgatt-gttggatagtgagatgggatctcagatctaggagttcctaggttgaaatcaatacgggtag 26329255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 11756127 - 11756246
Alignment:
Q  74 tgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagat-ggatctcagatcaaggcgttc 172  Q
    |||||||||||||||||| | | || ||||||||||  ||||||||||||||| || || | |||  ||||||||||| |||||   |||| | | ||||    
T  11756127 tgtttgaaggtaacttcatctttttgagttgtaatcagataatcacaggggctgtgattga-ttgagggaagtgagatgggatc---gatctaagagttc 11756222  T
Q  173 ctaagttgaagtcaagacgggtag 196  Q
    ||| ||||||||||| ||||||||    
T  11756223 ctaggttgaagtcaatacgggtag 11756246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 13734961 - 13735014
Alignment:
Q  144 agtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    |||||||||| |||||||||| ||| ||||||| ||||||||| ||||||||||    
T  13734961 agtgagatgggatctcagatctaggagttcctaggttgaagtctagacgggtag 13735014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 17661396 - 17661452
Alignment:
Q  141 ggaagtgagatgga-tctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    |||||||||||||| ||||||||| ||| ||||||| ||||||||||| | ||||||    
T  17661396 ggaagtgagatggaatctcagatctaggagttcctaggttgaagtcaatatgggtag 17661452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 10198167 - 10198292
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagatg-gatctcagatcaaggcg 169  Q
    |||| ||||||| ||||||||| ||||| || |||| ||  ||||||||||||| | || || ||| |  |||||||||||| ||||||||||| ||| |    
T  10198167 ttgtctttgaagataacttcacaatattgagctgtagtctgataatcacaggggatgtgattgatt-gacggaagtgagatgagatctcagatctaggag 10198265  T
Q  170 ttcctaagttgaagtcaagacgggtag 196  Q
    |||||| ||||||||||||||||||||    
T  10198266 ttcctaggttgaagtcaagacgggtag 10198292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 16655255 - 16655380
Alignment:
Q  71 ttgtgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagat-ggatctcagatcaaggcg 169  Q
    ||||||||||||||||||||| | |||| ||||||||||  | ||||||||||| | || || | |||  | ||||||||| |||||||||||| ||| |    
T  16655255 ttgtgtttgaaggtaacttcatcttattgagttgtaatcagaaaatcacaggggatgtgattga-ttgaggcaagtgagatgggatctcagatctaggag 16655353  T
Q  170 ttcctaagttgaagtcaagacgggtag 196  Q
    |||||| |||||| |||||| ||||||    
T  16655354 ttcctaggttgaactcaagatgggtag 16655380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 8163956 - 8163903
Alignment:
Q  144 agtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    |||||||||| |||||||||| ||| ||||||| ||||||||| ||||||||||    
T  8163956 agtgagatgggatctcagatctaggagttcctaggttgaagtctagacgggtag 8163903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 21478279 - 21478226
Alignment:
Q  144 agtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    |||||||||| |||||||||| ||| ||||||| ||||||||| ||||||||||    
T  21478279 agtgagatgggatctcagatctaggagttcctaggttgaagtctagacgggtag 21478226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 196
Target Start/End: Original strand, 12814513 - 12814633
Alignment:
Q  76 tttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgaga-tggatctcagatcaaggcgttcct 174  Q
    ||||||||||||||||||| ||| ||||||||||  ||||||||||||| | ||||| | |||  |||||||||| ||||||| | ||| ||| ||| ||    
T  12814513 tttgaaggtaacttcaccaaattgagttgtaatctgataatcacaggggttgtggttga-ttgagggaagtgagattggatcttaaatctaggagtttct 12814611  T
Q  175 aagttgaagtcaagacgggtag 196  Q
    | ||||| ||||||||||||||    
T  12814612 aggttgacgtcaagacgggtag 12814633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 23249947 - 23249862
Alignment:
Q  102 ttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaa 187  Q
    ||||||||  |||| |||||||||| || || ||| || ||||||||||||| |||||||||| ||| ||||||| |||||||||||    
T  23249947 ttgtaatctaataaccacaggggctgtgattgatt-gtgggaagtgagatgggatctcagatctaggagttcctaggttgaagtcaa 23249862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 23864454 - 23864508
Alignment:
Q  143 aagtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    ||||||||||| |||||||||| ||| ||||||| ||||||||||| ||||||||    
T  23864454 aagtgagatgggatctcagatctaggagttcctaggttgaagtcaaaacgggtag 23864508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 33466119 - 33466191
Alignment:
Q  114 aatcacaggggctttggttaatttgt-aggaagtgagatggatctcagatcaaggcgttcctaagttgaagtca 186  Q
    ||||||||||||| || || |||||| ||| |||||||||| ||||||||| ||| ||||||| ||||||||||    
T  33466119 aatcacaggggctgtgatt-atttgtaagggagtgagatgggtctcagatctaggagttcctaggttgaagtca 33466191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 1684154 - 1684094
Alignment:
Q  136 ttgtaggaagtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggta 195  Q
    ||||||| |||||||||| |||||||| | ||| |||| || |||||||||||||||||||    
T  1684154 ttgtagggagtgagatgggatctcagaactaggagttcttaggttgaagtcaagacgggta 1684094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 9957 - 10073
Alignment:
Q  76 tttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagatg-gatctcagatcaaggcgttcct 174  Q
    |||||| ||||||||  || ||| ||||||||||  ||||||||||||| | ||||| ||| |  |||||||||||| ||||||||||| ||| ||||||    
T  9957 tttgaatgtaacttcgtcaaattgagttgtaatctgataatcacaggggttatggttgatt-gagggaagtgagatgagatctcagatctaggagttcct 10055  T
Q  175 aagttgaagtcaagacgg 192  Q
      ||||||||||||||||    
T  10056 cggttgaagtcaagacgg 10073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 31587713 - 31587602
Alignment:
Q  76 tttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagatg-gatctcagatcaaggcgttcct 174  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||| | | || || | |||  ||||||| |||| ||||| ||||| ||| ||||||    
T  31587713 tttgaaggtaacttcaccatattgagttgtaatctgataatcacaggagttgtgattga-ttgagggaagtgggatgagatctaagatctaggagttcct 31587615  T
Q  175 aagttgaagtcaa 187  Q
    | |||||||||||    
T  31587614 aggttgaagtcaa 31587602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 24317108 - 24317230
Alignment:
Q  74 tgtttgaaggtaacttcaccatattaagttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagat-ggatctcagatcaaggcgttc 172  Q
    |||||||||| ||||||| | | || ||||||||||  ||||||||||||||| || || | |||  |||||| |||| |||||||||||| ||| ||||    
T  24317108 tgtttgaaggcaacttcatcttttttagttgtaatcagataatcacaggggctatgattga-ttgagggaagttagatgggatctcagatctaggagttc 24317206  T
Q  173 ctaagttgaagtcaagacgggtag 196  Q
    |||  |||||||||| ||||||||    
T  24317207 ctagtttgaagtcaatacgggtag 24317230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 19198264 - 19198325
Alignment:
Q  141 ggaagtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtagatctt 201  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||  |||||||| ||||    
T  19198264 ggaagtgagatgggatctcagatctaggcgttcctaggttgaagtcagaacgggtaggtctt 19198325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 21250154 - 21250239
Alignment:
Q  112 ataatcacaggggctttggttaatttgtagga-agtgagatg-gatctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    ||||||||||||||| || || ||| |||||| ||||||||| ||||||||||| ||| | ||||| ||||||||| ||||||||||    
T  21250154 ataatcacaggggctgtgattgatt-gtaggatagtgagatgagatctcagatctaggagatcctaggttgaagtctagacgggtag 21250239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 36398782 - 36398835
Alignment:
Q  144 agtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    |||||||||| |||||||||| ||| ||||||| ||||||||| ||||||||||    
T  36398782 agtgagatgggatctcagatctaggagttcctaggttgaagtctagacgggtag 36398835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 11400 - 11306
Alignment:
Q  102 ttgtaatcctataatcacaggggctttggttaatttgtaggaagtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    ||||||||  ||||||||||||||| || || ||| || ||||||||||||| |||||||||| ||| || |||| ||||||||||| || |||||    
T  11400 ttgtaatctgataatcacaggggctgtgattgatt-gtgggaagtgagatgggatctcagatctaggagtacctaggttgaagtcaataccggtag 11306  T

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Target: scaffold0338 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 16201 - 16254
Alignment:
Q  144 agtgagatg-gatctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||| ||||||||||    
T  16201 agtgagatgagatctcagatctaggagttcctaggttgaagtctagacgggtag 16254  T

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Target: scaffold0143 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 36497 - 36425
Alignment:
Q  114 aatcacaggggctttggttaatttgt-aggaagtgagatggatctcagatcaaggcgttcctaagttgaagtca 186  Q
    ||||||||||||| || || |||||| ||| |||||||||| ||||||||| ||| ||||||| ||||||||||    
T  36497 aatcacaggggctgtgatt-atttgtaagggagtgagatgggtctcagatctaggagttcctaggttgaagtca 36425  T

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Target: scaffold0064 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 45846 - 45907
Alignment:
Q  136 ttgtaggaagtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggtag 196  Q
    ||||||| ||| |||||| |||||||||||||| |||| || ||||||||||| ||||||||    
T  45846 ttgtagggagtaagatgggatctcagatcaaggagttcttaggttgaagtcaatacgggtag 45907  T

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Target: scaffold0520 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 5593 - 5537
Alignment:
Q  140 aggaagtgagatgg-atctcagatcaaggcgttcctaagttgaagtcaagacgggta 195  Q
    |||||||||||||| |||||||||| ||| ||||||| |||||||| ||||| ||||    
T  5593 aggaagtgagatgggatctcagatctaggagttcctaggttgaagttaagacaggta 5537  T

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