View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10233A_low_32 (Length: 400)
Name: NF10233A_low_32
Description: NF10233A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10233A_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 350; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 13 - 382
Target Start/End: Original strand, 10230591 - 10230960
Alignment:
| Q |
13 |
agatggacatcatgcacagcttctggcagttaggtgatgagcttcgcggacactcaaaagcctctgaggatcacaagtggttgatggttgcttctaagtt |
112 |
Q |
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| T |
10230591 |
agatggacaacatgcacagcttctggcagttaggtgatgagcttcgcggacactcaaaagcctctgaggatcacaagtggttgatggttgcttctaagtt |
10230690 |
T |
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| Q |
113 |
agctgaacagagatcaaaggctgagcgcttcaacaaccttgatctttcaaagggtcctctcgaaacaaggccaagggataaatttgggttccaggaggag |
212 |
Q |
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| T |
10230691 |
agctgaacagagatcaaaggctgagcgcttcaacaaccttgatctttcaaagggtcctctcgaaacaaggccaagggataaatttgggttccaggaggag |
10230790 |
T |
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| Q |
213 |
aacaaatttgacactcttaacttgagcatgttaaacctggactctaaatttactgagaatatgagcaaaaactcgcttcggaacggtgtttacaatatga |
312 |
Q |
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| T |
10230791 |
aacaaattcgacactcttaacttgagcatgttaaacctggactctaaatttaccgagaatatgagcaaaagctcgcttcggaacggtgtttacaatatga |
10230890 |
T |
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| Q |
313 |
atgctgtgtaccagaaaagcaatgtaaactttgcgggtaacatgaatagtaacaagtatagcggtgatgt |
382 |
Q |
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| T |
10230891 |
atgctgtgtaccagaaaagcaatgtaaactttgcgggtaacatgaatagtaacaagtatagcggtaatgt |
10230960 |
T |
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